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S., Terasaki, N., Yamazaki, M., Lloyd, A. L., & Conolly, R. B. (2011). Mechanistic Computational Model of Steroidogenesis in H295R Cells: Role of Oxysterols and Cell Proliferation to Improve Predictability of Biochemical Response to Endocrine Active Chemical-Metyrapone. TOXICOLOGICAL SCIENCES, 123(1), 80–93. https://doi.org/10.1093/toxsci/kfr167 Breen, M., Breen, M. S., Terasaki, N., Yamazaki, M., Lloyd, A. L., & Conolly, R. B. (2011). Mechanistic computational model of steroidogenesis in H295R cells: role of oxysterols and cell proliferation to improve predictability of biochemical response to endocrine active chemical—metyrapone. Toxicological Sciences, 123(1), 80–93. Walker, T., Johnson, P. H., Moreira, L. A., Iturbe-Ormaetxe, I., Frentiu, F. D., McMeniman, C. J., … Hoffmann, A. A. (2011). The wMel Wolbachia strain blocks dengue and invades caged Aedes aegypti populations. NATURE, 476(7361), 450–U101. https://doi.org/10.1038/nature10355 Walker, T. J. P. H., Johnson, P. H., Moreira, L. A., Iturbe-Ormaetxe, I., Frentiu, F. D., McMeniman, C. J., … others. (2011). The wMel Wolbachia strain blocks dengue and invades caged Aedes aegypti populations. Nature, 476(7361), 450. Huang, Y., Lloyd, A. L., Legros, M., & Gould, F. (2010). Gene-drive into insect populations with age and spatial structure: a theoretical assessment. Evolutionary Applications, 4(3), 415–428. https://doi.org/10.1111/j.1752-4571.2010.00153.x Ward, C. M., Su, J. T., Huang, Y., Lloyd, A. L., Gould, F., & Hay, B. A. (2010). Medea selfish genetic elements as tools for altering traits of wild populations: A theoretical analysis. Evolution, 65(4), 1149–1162. https://doi.org/10.1111/j.1558-5646.2010.01186.x Arauz, L. F., Neufeld, K. N., Lloyd, A. L., & Ojiambo, P. S. (2010). Quantitative Models for Germination and Infection of Pseudoperonospora cubensis in Response to Temperature and Duration of Leaf Wetness. PHYTOPATHOLOGY, 100(9), 959–967. https://doi.org/10.1094/phyto-100-9-0959 Xu, C., Legros, M., Gould, F., & Lloyd, A. L. (2010). Understanding Uncertainties in Model-Based Predictions of Aedes aegypti Population Dynamics. PLoS Neglected Tropical Diseases, 4(9), e830. https://doi.org/10.1371/journal.pntd.0000830 Cintron-Arias, A., Banks, H. T., Capaldi, A., & Lloyd, A. L. (2009). A sensitivity matrix based methodology for inverse problem formulation. JOURNAL OF INVERSE AND ILL-POSED PROBLEMS, 17(6), 545–564. https://doi.org/10.1515/JIIP.2009.034 Legros, M., Lloyd, A. L., Huang, Y., & Gould, F. (2009). Density-Dependent Intraspecific Competition in the Larval Stage of Aedes aegypti (Diptera: Culicidae): Revisiting the Current Paradigm. JOURNAL OF MEDICAL ENTOMOLOGY, 46(3), 409–419. https://doi.org/10.1603/033.046.0301 Conlan, A. J. K., Rohani, P., Lloyd, A. L., Keeling, M., & Grenfell, B. T. (2010). Resolving the impact of waiting time distributions on the persistence of measles. Journal of The Royal Society Interface, 7(45), 623–640. https://doi.org/10.1098/rsif.2009.0284 Lloyd, A. L. (2009). Sensitivity of Model-Based Epidemiological Parameter Estimation to Model Assumptions. In Mathematical and Statistical Estimation Approaches in Epidemiology (pp. 123–141). https://doi.org/10.1007/978-90-481-2313-1_6 Magori, K., Legros, M., Puente, M. E., Focks, D. A., Scott, T. W., Lloyd, A. L., & Gould, F. (2009). Skeeter Buster: A Stochastic, Spatially Explicit Modeling Tool for Studying Aedes aegypti Population Replacement and Population Suppression Strategies. PLoS Neglected Tropical Diseases, 3(9), e508. https://doi.org/10.1371/journal.pntd.0000508 Lloyd, A., & Sattenspiel, L. (2009). Spatiotemporal dynamics of measles. In Spatial Ecology (pp. 251–272). https://doi.org/10.1201/9781420059861.ch13 Lloyd, A. L., & Sattenspiel, L. (2009). Spatiotemporal dynamics of measles: synchrony and persistence in a disease metapopulation. Spatial Ecology, pp. 251–272. https://doi.org/http://dx.doi.org/10.1201/9781420059861.ch13 Cintron-Arias, A., Castillo-Chavez, C., Bettencourt, L. M. A., Lloyd, A. L., & Banks, H. T. (2009). THE ESTIMATION OF THE EFFECTIVE REPRODUCTIVE NUMBER FROM DISEASE OUTBREAK DATA. MATHEMATICAL BIOSCIENCES AND ENGINEERING, 6(2), 261–282. https://doi.org/10.3934/mbe.2009.6.261 Sattenspiel, L., & Lloyd, A. (2009). The geographic spread of infectious diseases: models and applications. In Princeton University Press. Princeton University Press. Gould, F., Huang, Y., Legros, M., & Lloyd, A. L. (2008). A Killer-Rescue system for self-limiting gene drive of anti-pathogen constructs. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 275(1653), 2823–2829. https://doi.org/10.1098/rspb.2008.0846 Huang, Y., Lloyd, A. L., Legros, M., & Gould, F. (2009). Gene-drive in age-structured insect populations. Evolutionary Applications, 2(2), 143–159. https://doi.org/10.1111/j.1752-4571.2008.00049.x Huang, Y., Lloyd, A. L., Legros, M., & Gould, F. (2009). Gene-drive in age-structured insect populations. Evolutionary Applications, 2(2), 143–159. https://doi.org/http://dx.doi.org/10.1111/j.1752-4571.2008.00049.x Huang, Y., Magori, K., Lloyd, A. L., & Gould, F. (2007). Introducing desirable transgenes into insect populations using Y-linked meiotic drive - A theoretical assessment. EVOLUTION, 61(4), 717–726. https://doi.org/10.1111/j.1558-5646.2007.00075.x Huang, Y., Magori, K., Lloyd, A. L., & Gould, F. (2007). Introducing transgenes into insect populations using combined gene-drive strategies: Modeling and analysis. INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY, 37(10), 1054–1063. https://doi.org/10.1016/j.ibmb.2007.06.002 Lloyd, A. L., & Valeika, S. (2007). Network models in epidemiology: an overview. In Complex Population Dynamics (pp. 189–214). https://doi.org/10.1142/9789812771582_0008 Bai, P., Banks, H. T., Dediu, S., Govan, A. Y., Last, M., Lloyd, A., … Slenning, B. D. (2007). Stochastic and deterministic models for agricultural production networks. Mathematical Biosciences and Engineering, 4(3), 373–402. https://doi.org/10.3934/mbe.2007.4.373 Lloyd, A. L., Zhang, J., & Root, A. M. (2007). Stochasticity and heterogeneity in host-vector models. JOURNAL OF THE ROYAL SOCIETY INTERFACE, 4(16), 851–863. https://doi.org/10.1098/rsif.2007.1064 Lloyd, A. L. (2006). Book Review. Journal of Difference Equations and Applications, 12(5), 501–502. https://doi.org/10.1080/10236190600601508 Lloyd, A., & Wodarz, D. (2006). Drug resistance in acute viral infections: Rhinovirus as a case study. In Disease Evolution (pp. 193–212). https://doi.org/10.1090/dimacs/071/10 Lloyd, A. L., Valeika, S., & Cintrón-Arias, A. (2006). Infection dynamics on small-world networks. https://doi.org/10.1090/conm/410/07729 Lloyd, A. L., Valeika, S., & Cintrón-Arias, A. (2006). Infection dynamics on small-world networks. In Contemporary Mathematics (Vol. 410, pp. 209–234). https://doi.org/http://dx.doi.org/10.1090/conm/410/07729 Wodarz, D., & Lloyd, A. L. (2004). Immune responses and the emergence of drug-resistant virus strains in vivo. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 271(1544), 1101–1109. https://doi.org/10.1098/rspb.2003.2664 Sabouri, A. H., Saito, M., Lloyd, A. L., Vine, A. M., Witkover, A. W., Furukawa, Y., … Osame, M. (2004). Polymorphism in the interleukin-10 promoter affects both provirus load and the risk of human T lymphotropic virus type I-associated myelopathy/tropical spastic paraparesis. JOURNAL OF INFECTIOUS DISEASES, 190(7), 1279–1285. https://doi.org/10.1086/423942 Lloyd, A. L. (2004). Estimating variability in models for recurrent epidemics: assessing the use of moment closure techniques. THEORETICAL POPULATION BIOLOGY, 65(1), 49–65. https://doi.org/10.1016/j.tpb.2003.07.002 Lloyd, A. L. (2004). Estimating variability in models for recurrent epidemics: assessing the use of moment closure techniques. Theoretical Population Biology, 65(1), 49–65. https://doi.org/http://dx.doi.org/10.1016/j.tpb.2003.07.002 Lloyd, A. L., & Jansen, V. A. A. (2004). Spatiotemporal dynamics of epidemics: synchrony in metapopulation models. MATHEMATICAL BIOSCIENCES, Vol. 188, pp. 1–16. https://doi.org/10.1016/j.mbs.2003.09.003 Lloyd, A. L., & Jansen, V. A. A. (2004). Spatiotemporal dynamics of epidemics: synchrony in metapopulation models. Mathematical Biosciences, 188(1-2), 1–16. https://doi.org/http://dx.doi.org/10.1016/j.mbs.2003.09.003 Gravenor, M. B., Lloyd, A. L., Kremsner, P. G., Missinou, M. A., English, M., Marsh, K., & Kwiatkowski, D. (2002). A Model for Estimating Total Parasite Load in Falciparum Malaria Patients. Journal of Theoretical Biology, 217(2), 137–148. https://doi.org/10.1006/jtbi.2002.3030 Vine, A. M., Witkover, A. D., Lloyd, A. L., Jeffery, K. J. M., Siddiqui, A., Marshall, S. E. F., … Bangham, C. R. M. (2002). Polygenic control of human T lymphotropic virus type I (HTLV-I) provirus load and the risk of HTLV-I-associated myelopathy/tropical spastic paraparesis. JOURNAL OF INFECTIOUS DISEASES, 186(7), 932–939. https://doi.org/10.1086/342953 Lloyd, A. L. (2001). Destabilization of epidemic models with the inclusion of realistic distributions of infectious periods. Proceedings of the Royal Society of London. Series B: Biological Sciences, 268(1470), 985–993. https://doi.org/10.1098/rspb.2001.1599 Lloyd, A. L., & May, R. M. (2001). Epidemiology: How Viruses Spread Among Computers and People. Science, 292(5520), 1316–1317. https://doi.org/10.1126/SCIENCE.1061076 May, R. M., & Lloyd, A. L. (2001). Infection dynamics on scale-free networks. Physical Review E, 64(6), 066112. https://doi.org/10.1103/physreve.64.066112 May, R., & Lloyd, A. (2001). Infection dynamics on scale-free networks. Physical Review E, 64(6). https://doi.org/http://dx.doi.org/10.1103/physreve.64.066112 Lloyd, A. L. (2001). Realistic Distributions of Infectious Periods in Epidemic Models: Changing Patterns of Persistence and Dynamics. Theoretical Population Biology, 60(1), 59–71. https://doi.org/10.1006/tpbi.2001.1525 Lloyd, A. L. (2001). Realistic Distributions of Infectious Periods in Epidemic Models: Changing Patterns of Persistence and Dynamics. Theoretical Population Biology, 60(1), 59–71. https://doi.org/http://dx.doi.org/10.1006/tpbi.2001.1525 Lloyd, A. L. (2001). The dependence of viral parameter estimates on the assumed viral life cycle: limitations of studies of viral load data. Proceedings of the Royal Society of London. Series B: Biological Sciences, 268(1469), 847–854. https://doi.org/10.1098/rspb.2000.1572 Barchet, W., Oehen, S., Klenerman, P., Wodarz, D., Bocharov, G., Lloyd, A. L., … Ehl, S. (2000). Direct quantitation of rapid elimination of viral antigen-positive lymphocytes by antiviral CD8+ T cellsin vivo. European Journal of Immunology, 30(5), 1356–1363. https://doi.org/10.1002/(SICI)1521-4141(200005)30:5<1356::AID-IMMU1356>3.0.CO;2-K Masel, J., Arnaout, R. A., O'Brien, T. R., Goedert, J. J., & Lloyd, A. L. (2000). Fluctuations in HIV-1 Viral Load Are Correlated to CD4+ T-Lymphocyte Count During the Natural Course of Infection. JAIDS Journal of Acquired Immune Deficiency Syndromes, 23(5), 375–379. https://doi.org/10.1097/00126334-200004150-00003 Jansen, V. A. A., & Lloyd, A. L. (2000). Local stability analysis of spatially homogeneous solutions of multi-patch systems. Journal of Mathematical Biology, 41(3), 232–252. https://doi.org/10.1007/s002850000048 Jeffery, K. J. M., Siddiqui, A. A., Bunce, M., Lloyd, A. L., Vine, A. M., Witkover, A. D., … Bangham, C. R. M. (2000). The Influence of HLA Class I Alleles and Heterozygosity on the Outcome of Human T Cell Lymphotropic Virus Type I Infection. The Journal of Immunology, 165(12), 7278–7284. https://doi.org/10.4049/jimmunol.165.12.7278 Arnaout, R. A., Lloyd, A. L., O'Brien, T. R., Goedert, J. J., Leonard, J. M., & Nowak, M. A. (1999). A simple relationship between viral load and survival time in HIV-1 infection. Proceedings of the National Academy of Sciences, 96(20), 11549–11553. https://doi.org/10.1073/pnas.96.20.11549 Wodarz, D., Lloyd, A. L., Jansen, V. A. A., & Nowak, M. A. (1999). Dynamics of Macrophage and T Cell Infection by HIV. Journal of Theoretical Biology, 196(1), 101–113. https://doi.org/10.1006/jtbi.1998.0816 Jeffery, K. J. M., Usuku, K., Hall, S. E., Matsumoto, W., Taylor, G. P., Procter, J., … Bangham, C. R. M. (1999). HLA alleles determine human T-lymphotropic virus-I (HTLV-I) proviral load and the risk of HTLV-I-associated myelopathy. Proceedings of the National Academy of Sciences, 96(7), 3848–3853. https://doi.org/10.1073/pnas.96.7.3848 Jeffery, K. J. M., Usuku, K., Hall, S. E., Matsumoto, W., Taylor, G. P., Procter, J., … others. (1999). HLA alleles determine human T-lymphotropic virus-I (HTLV-I) proviral load and the risk of HTLV-I-associated myelopathy. Proceedings of the National Academy of Sciences, 96(7), 3848–3853. Haydon, D. T., & Lloyd, A. L. (1999). On the origins of the Lotka-Volterra Equations. The Bulletin of the Ecological Society of America, 80(3), 205–206. Lloyd, A. L., & May, R. M. (1999). Synchronicity, chaos and population cycles: spatial coherence in an uncertain world. Trends in Ecology & Evolution, 14(11), 417–418. https://doi.org/10.1016/s0169-5347(99)01717-6 Gravenor, M. B., & Lloyd, A. L. (1998). Reply to: Models for the in-host dynamics of malaria revisited: errors in some basic models lead to large overestimates of growth rates. PARASITOLOGY, 117(5), 409–410. https://doi.org/10.1017/S0031182098003229 Chun, T.-W., Stuyver, L., Mizell, S. B., Ehler, L. A., Mican, J. A. M., Baseler, M., … Fauci, A. S. (1997). Presence of an inducible HIV-1 latent reservoir during highly active antiretroviral therapy. Proceedings of the National Academy of Sciences, 94(24), 13193–13197. https://doi.org/10.1073/pnas.94.24.13193 Lifson, J. D., Nowak, M. A., Goldstein, S., Rossio, J. L., Kinter, A., Vasquez, G., … Hirsch, V. M. (1997). The extent of early viral replication is a critical determinant of the natural history of simian immunodeficiency virus infection. Journal of Virology, 71(12), 9508–9514. Lifson, J. D., Nowak, M. A., Goldstein, S., Rossio, J. L., Kinter, A., Vasquez, G., … others. (1997). The extent of early viral replication is a critical determinant of the natural history of simian immunodeficiency virus infection. Journal of Virology, 71(12), 9508–9514. Nowak, M. A., Lloyd, A. L., Vasquez, G. M., Wiltrout, T. A., Wahl, L. M., Bischofberger, N., … Lifson, J. D. (1997). Viral dynamics of primary viremia and antiretroviral therapy in simian immunodeficiency virus infection. Journal of Virology, 71(10), 7518–7525. Lloyd, A. L., & May, R. M. (1996). Spatial Heterogeneity in Epidemic Models. Journal of Theoretical Biology, 179(1), 1–11. https://doi.org/10.1006/jtbi.1996.0042 Lloyd, A. L., & May, R. M. (1996). Spatial Heterogeneity in Epidemic Models. Journal of Theoretical Biology, 179(1), 1–11. https://doi.org/http://dx.doi.org/10.1006/jtbi.1996.0042 Lloyd, A. L., & Lloyd, D. (1995). Chaos : Its significance and detection in biology. Biological Rhythm Research, 26(2), 233–252. https://doi.org/10.1080/09291019509360338 Lloyd, A. L. (1995). Computing Bouts of the Prisoner's Dilemma. Scientific American, 272(6), 110–115. https://doi.org/10.1038/scientificamerican0695-110 Lloyd, A. L. (1995). The coupled logistic map: a simple model for the effects of spatial heterogeneity on population dynamics. Journal of Theoretical Biology, 173(3), 217–230. https://doi.org/10.1006/jtbi.1995.0058 Lloyd, A. L. (1994). Chaos and forecasting. Trends in Ecology & Evolution, 9(7), 244–245. https://doi.org/10.1016/0169-5347(94)90288-7 Lloyd, A. L. (1994). Chaos and forecasting. Trends in Ecology & Evolution, 9(7), 244–245. https://doi.org/http://dx.doi.org/10.1016/0169-5347(94)90288-7 Lloyd, D., & Lloyd, A. L. (1994). Hypothesis: a controlled chaotic attractor constitutes the central oscillator of the circadian clock. Biochemical Society Transactions, 22(3), 322S–322S. https://doi.org/10.1042/bst022322s Lloyd, A. L., & Gravenor, M. B. (1994). Linear filters and nonlinear forecasting. Proceedings of the Royal Society of London. Series B: Biological Sciences, 256(1346), 157–161. https://doi.org/10.1098/rspb.1994.0064 Mason, D. J., Lloyd, A. L., & Lloyd, D. (1993). An inexpensive infrared growth sensor array for detection of bacterial antibiotic susceptibility. FEMS Microbiology Letters, 111(2-3), 251–254. https://doi.org/10.1111/j.1574-6968.1993.tb06394.x Lloyd, A. L., & Lloyd, D. (1993). Hypothesis: the central oscillator of the circadian clock is a controlled chaotic attractor. Biosystems, 29(2-3), 77–85. https://doi.org/10.1016/0303-2647(93)90085-q Lloyd, A. L., & Lloyd, D. (1993). Hypothesis: the central oscillator of the circadian clock is a controlled chaotic attractor. Biosystems, 29(2-3), 77–85. https://doi.org/http://dx.doi.org/10.1016/0303-2647(93)90085-q Lloyd, D., Lloyd, A. L., & Folke Olsen, L. (1992). The cell division cycle: a physiologically plausible dynamic model can exhibit chaotic solutions. Biosystems, 27(1), 17–24. https://doi.org/10.1016/0303-2647(92)90043-x Lloyd, D., Lloyd, A. L., & Olsen, L. F. (1992). The cell division cycle: a physiologically plausible dynamic model can exhibit chaotic solutions. Biosystems, 27(1), 17–24. https://doi.org/http://dx.doi.org/10.1016/0303-2647(92)90043-x Lloyd, D., James, C. J., Lloyd, A. L., Yarlett, N., & Yarlett, N. C. (1987). The Effects of Oxygen on Fermentation in Tritrichomonas Foetus KV1 and its Variant 1MR-100 with Defective Hydrogenosomes. Microbiology, 133(5), 1181–1186. https://doi.org/10.1099/00221287-133-5-1181 Lloyd, D., James, C. J., Lloyd, A. L., Yarlett, N., & Yarlett, N. C. (1987). The effects of oxygen on fermentation in Tritrichomonas foetus KV1 and its variant 1MR-100 with defective hydrogenosomes. Microbiology, 133(5), 1181–1186.