Amanda M Hulse-Kemp

Detecting Cotton Leaf Curl Virus Resistance Quantitative Trait Loci in Gossypium hirsutum and iCottonQTL a New R/Shiny App to Streamline Genetic Mapping

Plants.

Initiation of genomics-assisted breeding in Virginia-type peanuts through the generation of a de novo reference genome and informative markers

FRONTIERS IN PLANT SCIENCE, 13.

Two pathogen loci determine Blumeria graminis f. sp. tritici virulence to wheat resistance gene Pm1a

New Phytologist.

Chromosome-scale assembly of the Moringa oleifera Lam. genome uncovers polyploid history and evolution of secondary metabolism pathways through tandem duplication

Chang, J., Marczuk-Rojas, J. P., Waterman, C., Garcia-Llanos, A., Chen, S., Ma, X., … Carretero-Paulet, L. (2022, July 27). PLANT GENOME, Vol. 7.

Efficient imaging and computer vision detection of two cell shapes in young cotton fibers

Graham, B. P., Park, J., Billings, G. T., Hulse-Kemp, A. M., Haigler, C. H., & Lobaton, E. (2022, November 26). APPLICATIONS IN PLANT SCIENCES, Vol. 11.

Genetic variability and QTL mapping of winter survivability and leaf firing in African bermudagrass

Yu, S., Schoonmaker, A. N., Yan, L., Hulse-Kemp, A. M., Fontanier, C. H., Martin, D. L., … Wu, Y. Q. (2022, October 26). CROP SCIENCE, Vol. 10.

Leveraging National Germplasm Collections to Determine Significantly Associated Categorical Traits in Crops: Upland and Pima Cotton as a Case Study

FRONTIERS IN PLANT SCIENCE, 13.

Nuclear DNA contents and ploidy levels of North American Vaccinium species and interspecific hybrids

SCIENTIA HORTICULTURAE, 297.

Outlook for Implementation of Genomics-Based Selection in Public Cotton Breeding Programs

PLANTS-BASEL, 11(11).

There and back again; historical perspective and future directions for Vaccinium breeding and research studies

HORTICULTURE RESEARCH, 9.

An anchored chromosome-scale genome assembly of spinach improves annotation and reveals extensive gene rearrangements in euasterids

Hulse-Kemp, A. M., Bostan, H., Chen, S., Ashrafi, H., Stoffel, K., Sanseverino, W., … Van Deynze, A. (2021, June 10). PLANT GENOME, Vol. 6.

Genomic Resource Development for Hydrangea (Hydrangea macrophylla (Thunb.) Ser.)-A Transcriptome Assembly and a High-Density Genetic Linkage Map

HORTICULTURAE, 7(2).

High-quality reference genome and annotation aids understanding of berry development for evergreen blueberry (Vaccinium darrowii)

HORTICULTURE RESEARCH, 8(1).

Population structure and genetic diversity of the Pee Dee cotton breeding program

G3-GENES GENOMES GENETICS, 11(7).

Enhancing Upland cotton for drought resilience, productivity, and fiber quality: comparative evaluation and genetic dissection

MOLECULAR GENETICS AND GENOMICS, 295(1), 155–176.

Capsicum-An Abbreviated Compendium

JOURNAL OF THE AMERICAN SOCIETY FOR HORTICULTURAL SCIENCE, 144(1), 3–22.

Feeding high-oleic peanuts to layer hens enhances egg yolk color and oleic fatty acid content in shell eggs

Poultry Science, 98(4), 1732–1748.

Sequencing-Based Bin Map Construction of a Tomato Mapping Population, Facilitating High-Resolution Quantitative Trait Loci Detection

PLANT GENOME, 12(1).

Reference quality assembly of the 3.5-Gb genome of Capsicum annuum from a single linked-read library

HORTICULTURE RESEARCH, 5.

Diversity analysis of cotton (Gossypium hirsutum L.) germplasm using the CottonSNP63K Array.

BMC Plant Biology, 17(1), 37,

Reference Quality Assembly of the 3.5 Gb genome of Capsicum annuum from a Single Linked-Read Library

Hulse-Kemp, A. M., Maheshwari, S., Stoffel, K., Hill, T. A., Jaffe, D., Williams, S., … Deynze, A. V. (2017, June 20). (Vol. 6). Vol. 6.

A HapMap leads to a Capsicum annuum SNP infinium array: a new tool for pepper breeding

HORTICULTURE RESEARCH, 3(1).

Correction: DNA Sequence Evolution and Rare Homoeologous Conversion in Tetraploid Cotton.

PLoS Genetics, 12(7), 1006206,

DNA Sequence Evolution and Rare Homoeologous Conversion in Tetraploid Cotton

PLOS GENETICS, 12(5).

BAC-End Sequence-Based SNP Mining in Allotetraploid Cotton (Gossypium) Utilizing Resequencing Data, Phylogenetic Inferences, and Perspectives for Genetic Mapping.

G3&Amp;#58; Genes|Genomes|Genetics, 5(6), 1095–1105.

Development of a 63K SNP Array for Cotton and High-Density Mapping of Intraspecific and Interspecific Populations of Gossypium spp.

5(6), 1187–1209,

Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement.

Nature Biotechnology, 33(5), 531–537,

Development and bin mapping of gene-associated interspecific SNPs for cotton (Gossypium hirsutum L.) introgression breeding efforts.

BMC Genomics, 15(1), 945.

Genetic Variants Contribute to Gene Expression Variability in Humans

Genetics, 193(1), 95–108.

Haplotype phasing after joint estimation of recombination and linkage disequilibrium in breeding populations

J Anim Sci Biotechnol, 4(1), 30.

Insights into the Evolution of Cotton Diploids and Polyploids from Whole-Genome Re-sequencing

G3&Amp;#58; Genes|Genomes|Genetics, 3(10), 1809–1818.

Evolutionary Analysis of Sequence Divergence and Diversity of Duplicate Genes in Aspergillus fumigatus

EBO, 11, 623.