Works (4)

Updated: December 19th, 2023 05:02

2023 journal article

Detecting Cotton Leaf Curl Virus Resistance Quantitative Trait Loci in Gossypium hirsutum and iCottonQTL a New R/Shiny App to Streamline Genetic Mapping

PLANTS-BASEL, 12(5).

By: A. Schoonmaker n, A. Hulse-Kemp n, R. Youngblood*, Z. Rahmat*, M. Iqbal*, M. Rahman*, K. Kochan*, B. Scheffler*, J. Scheffler

author keywords: genetic mapping; cotton; genotyping; R; Shiny; cotton leaf curl virus; quantitative trait loci
Sources: Web Of Science, ORCID, NC State University Libraries
Added: March 3, 2023

2023 journal article

Representing true plant genomes: haplotype-resolved hybrid pepper genome with trio-binning

FRONTIERS IN PLANT SCIENCE, 14.

By: E. Delorean n, R. Youngblood*, S. Simpson*, A. Schoonmaker n, B. Scheffler, W. Rutter*, A. Hulse-Kemp n

author keywords: haplotype; pepper; genome assembly; trio-binning; HiFi
TL;DR: These assemblies represent the complete genome structure of the intraspecific hybrid, as well as the two parental genomes, and show measurable improvements over the currently available reference genomes. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: December 18, 2023

2022 article

Genetic variability and QTL mapping of winter survivability and leaf firing in African bermudagrass

Yu, S., Schoonmaker, A. N., Yan, L., Hulse-Kemp, A. M., Fontanier, C. H., Martin, D. L., … Wu, Y. Q. (2022, October 26). CROP SCIENCE, Vol. 10.

UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: November 7, 2022

2019 journal article

A Single, Shared Triploidy in Three Species of Parasitic Nematodes

G3-GENES GENOMES GENETICS, 10(1), 225–233.

By: A. Schoonmaker*, Y. Hao*, D. Bird* & G. Conant n

Contributors: A. Schoonmaker*, Y. Hao*, D. Bird* & G. Conant n

author keywords: polyploidy; evolutionary model; root-knot nematode
MeSH headings : Animals; Evolution, Molecular; Genome, Helminth; Phylogeny; Triploidy; Tylenchoidea / classification; Tylenchoidea / genetics
TL;DR: Three root-knot nematodes of the genus Meloidogyne descend from a single common hybridization event that yielded triplicated genomes with three distinguishable subgenomes, and ancestral loci where two of the three gene copies have been lost are less likely to have orthologs in Caenorhabditis elegans that are lethal when knocked down than are ancestral locu with surviving duplicate copies. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (OpenAlex)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: January 21, 2020

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