Works (6)

Updated: April 11th, 2023 10:13

2020 journal article

tuxnet: a simple interface to process RNA sequencing data and infer gene regulatory networks

PLANT JOURNAL, 101(3), 716–730.

By: R. Spurney, L. Broeck n, N. Clark, A. Fisher, M. Balaguer n & R. Sozzani

author keywords: Arabidopsis thaliana; gene regulatory network inference; graphical user interface; RNA sequencing processing; stem cell maintenance; technical advance
Sources: Web Of Science, ORCID
Added: December 9, 2019

2019 journal article

Stem-cell-ubiquitous genes spatiotemporally coordinate division through regulation of stem-cell-specific gene networks

NATURE COMMUNICATIONS, 10.

By: N. Clark, E. Buckner, A. Fisher, E. Nelson n, T. Nguyen, A. Simmons*, M. Balaguer n, T. Butler-Smith n ...

Sources: Web Of Science, ORCID
Added: December 30, 2019

2017 journal article

Predicting gene regulatory networks by combining spatial and temporal gene expression data in Arabidopsis root stem cells

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 114(36), E7632–E7640.

By: M. Balaguer n, A. Fisher, N. Clark, M. Fernandez-Espinosa*, B. Moller*, D. Weijers*, J. Lohmann*, C. Williams ...

author keywords: root stem cell; root development; cell-type expression profile; gene regulatory network; modeling
Sources: Web Of Science, ORCID
Added: August 6, 2018

2016 journal article

Gene and networks regulating the root stem cell niche of Arabidopsis

Curr Opin Plant Biol, 29, 38–43.

By: A. Fisher & R. Sozzani

Sources: Web Of Science, ORCID
Added: August 6, 2018

2016 journal article

Tracking transcription factor mobility and interaction in Arabidopsis roots with fluorescence correlation spectroscopy

Elife, 5.

By: N. Clark, E. Hinde, C. Winter, A. Fisher, G. Crosti, I. Blilou, E. Gratton, P. Benfey, R. Sozzani

Source: NC State University Libraries
Added: August 6, 2018

2014 review

Omics and modelling approaches for understanding regulation of asymmetric cell divisions in arabidopsis and other angiosperm plants

[Review of ]. ANNALS OF BOTANY, 113(7), 1083–1105.

By: K. Kajala, P. Ramakrishna, A. Fisher, D. Bergmann, I. De Smet, R. Sozzani, D. Weijers, S. Brady

author keywords: Asymmetric cell division; embryo; root; stomata; lateral root; cortex endodermis initial; omics; Arabidopsis thaliana; Zea mays; maize
Sources: Web Of Science, ORCID
Added: August 6, 2018