Works (66)
Updated: July 25th, 2023 07:45
2022 review
Deciphering the molecular basis of tissue-specific gene expression in plants: Can synthetic biology help?
[Review of ]. CURRENT OPINION IN PLANT BIOLOGY, 68.
author keywords: Tissue specificity; Gene expression; Synthetic biology; Transcription; factor; Epigenetics; Single cell; Transcriptomics; Logic gate; Promoter; Cis-regulatory element
MeSH headings : Computational Biology; Gene Expression; Gene Regulatory Networks / genetics; Plants / genetics; Plants / metabolism; Promoter Regions, Genetic / genetics; Synthetic Biology; Transcription Factors / metabolism
Sources: ORCID, Web Of Science
Added: June 12, 2022
2022 journal article
To Fight or to Grow: The Balancing Role of Ethylene in Plant Abiotic Stress Responses
PLANTS-BASEL, 11(1).
author keywords: ethylene; abiotic stress; hormone crosstalk; growth and defense tradeoff
www.mdpi.com (publisher PDF)
Sources: Web Of Science, ORCID
Added: December 24, 2021
2021 journal article
Auxin Interactions with Other Hormones in Plant Development
Cold Spring Harbor Perspectives in Biology, 13(10), a039990.
MeSH headings : Indoleacetic Acids / metabolism; Plant Development; Plant Growth Regulators / metabolism
Sources: ORCID, Web Of Science, Crossref
Added: April 27, 2021
2021 journal article
Broadening the impact of plant science through innovative, integrative, and inclusive outreach
PLANT DIRECT, 5(4).
Sources: Web Of Science, ORCID
Added: February 9, 2022
2021 article
Editorial overview: Toward deciphering the molecular basis of plant phenotypic plasticity
Qiao, H., & Stepanova, A. N. (2021, October). CURRENT OPINION IN PLANT BIOLOGY, Vol. 63.
MeSH headings : Adaptation, Physiological; Plants / genetics
Sources: Web Of Science, ORCID
Added: November 15, 2021
2021 journal article
Leveraging synthetic biology approaches in plant hormone research
Current Opinion in Plant Biology.
MeSH headings : Biotechnology; Plant Growth Regulators; Plants / genetics; Synthetic Biology
Source: ORCID
Added: January 20, 2021
2021 review
Leveraging synthetic biology approaches in plant hormone research
[Review of ]. CURRENT OPINION IN PLANT BIOLOGY, 60.
Sources: Web Of Science, ORCID
Added: June 28, 2021
2021 article
Plant Biology Research: What Is Next?
Stepanova, A. N. (2021, September 30). FRONTIERS IN PLANT SCIENCE, Vol. 12.
author keywords: plant biology; plant physiology; synthetic biology; translational research; data reproducibility
Sources: Web Of Science, ORCID
Added: November 8, 2021
2020 journal article
An Improved Recombineering Toolset for Plants
The Plant Cell.
MeSH headings : Arabidopsis / genetics; Chromosomes, Artificial, Bacterial; Gene Editing / methods; Genes, Reporter; Genetic Engineering / methods; Plants / genetics; Plants, Genetically Modified / genetics; Recombination, Genetic
Source: ORCID
Added: January 11, 2020
2020 journal article
Development of a relative quantification method for infrared matrix-assisted laser desorption electrospray ionization mass spectrometry imaging of Arabidopsis seedlings
RAPID COMMUNICATIONS IN MASS SPECTROMETRY, 34(6).
MeSH headings : Arabidopsis / chemistry; Arabidopsis / genetics; Arabidopsis Proteins / genetics; Indoleacetic Acids / analysis; Indoles / analysis; Mutation; Oximes / analysis; Oxygenases / genetics; Seedlings / chemistry; Seedlings / genetics; Spectrometry, Mass, Electrospray Ionization / methods; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization / methods
Sources: Web Of Science, ORCID
Added: March 10, 2020
2020 journal article
Monitoring Ethylene in Plants: Genetically Encoded Reporters and Biosensors
Small Methods, 4(8), 1900260.
author keywords: biosensors; ethylene; hormones; reporters; signaling
Source: ORCID
Added: December 19, 2019
2020 journal article
Structure–Function Analysis of Interallelic Complementation in ROOTY Transheterozygotes
Plant Physiology, 183(3), 1110–1125.
MeSH headings : Alleles; Arabidopsis / genetics; Arabidopsis Proteins / chemistry; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Binding Sites; Carbon-Sulfur Lyases / chemistry; Carbon-Sulfur Lyases / genetics; Carbon-Sulfur Lyases / metabolism; Cotyledon / genetics; Genetic Complementation Test; Genetic Loci; Heterozygote; Models, Molecular; Mutation / genetics; Phenotype; Plants, Genetically Modified; Protein Multimerization; Structure-Activity Relationship
Source: ORCID
Added: July 2, 2020
2019 article
An improved plant toolset for high-throughput recombineering
Brumos, J., Zhao, C., Gong, Y., Soriano, D., Patel, A. P., Perez-Amador, M. A., … Alonso, J. M. (2019, June 3). (Vol. 6). Vol. 6.
Source: ORCID
Added: December 19, 2019
2019 journal article
Epigenetic silencing of a multifunctional plant stress regulator
ELIFE, 8.
MeSH headings : Arabidopsis / physiology; Arabidopsis Proteins / biosynthesis; Arabidopsis Proteins / metabolism; Epigenesis, Genetic; Ethylenes / metabolism; Gene Expression Regulation, Plant; Nuclear Proteins / metabolism; Receptors, Cell Surface / biosynthesis; Signal Transduction; Transcription Factors / metabolism
Sources: Web Of Science, ORCID
Added: September 30, 2019
2019 article
From Ethylene-Auxin Interactions to Auxin Biosynthesis and Signal Integration
Stepanova, A. N., & Alonso, J. M. (2019, July). PLANT CELL, Vol. 31, pp. 1393–1394.
MeSH headings : Ethylenes / metabolism; Gene Expression Regulation, Plant; Indoleacetic Acids / metabolism; Models, Biological; Plant Proteins / metabolism; Plant Roots / metabolism; Signal Transduction
Sources: Web Of Science, ORCID
Added: July 29, 2019
2019 article
RiboStreamR: a web application for quality control, analysis, and visualization of Ribo-seq data
Perkins, P., Mazzoni-Putman, S., Stepanova, A., Alonso, J., & Heber, S. (2019, June 6). BMC GENOMICS, Vol. 20.
author keywords: Ribo-seq; Next-generation sequencing; Data analysis; Web application
MeSH headings : Computer Graphics; Genomics / methods; High-Throughput Nucleotide Sequencing / methods; Humans; Protein Biosynthesis; Quality Control; RNA, Messenger / genetics; RNA, Messenger / metabolism; Ribosomes / metabolism; Sequence Analysis, RNA; Software; Transcriptome; Web Browser
Sources: Web Of Science, ORCID
Added: July 1, 2019
2018 review
A Plant Biologist's Toolbox to Study Translation
[Review of ]. FRONTIERS IN PLANT SCIENCE, 9.
author keywords: translation; ribosome; Ribo-seq; TRAP; polysome profiling; toeprinting; reporter; amino acid tagging
Sources: Web Of Science, ORCID
Added: August 6, 2018
2018 journal article
A mechanistic framework for auxin dependent Arabidopsis root hair elongation to low external phosphate
Nature Communications, 9(1).
MeSH headings : Arabidopsis / drug effects; Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Basic Helix-Loop-Helix Transcription Factors / genetics; Basic Helix-Loop-Helix Transcription Factors / metabolism; Gene Expression Regulation, Plant; Gravitropism / physiology; Indoleacetic Acids / metabolism; Organogenesis, Plant / drug effects; Organogenesis, Plant / genetics; Phosphates / deficiency; Phosphates / pharmacology; Plant Growth Regulators / metabolism; Plant Roots / drug effects; Plant Roots / genetics; Plant Roots / growth & development; Plant Roots / metabolism; Plants, Genetically Modified; Stress, Physiological; Transcription Factors / genetics; Transcription Factors / metabolism
Sources: ORCID, Crossref
Added: December 19, 2019
2018 journal article
Author Correction: A mechanistic framework for auxin dependent Arabidopsis root hair elongation to low external phosphate
Nature Communications, 9(1), 1818.
Sources: ORCID, Crossref
Added: December 19, 2019
2018 journal article
Local Auxin Biosynthesis Is a Key Regulator of Plant Development
DEVELOPMENTAL CELL, 47(3), 306-+.
MeSH headings : Arabidopsis / metabolism; Arabidopsis Proteins / metabolism; Biological Transport; Ethylenes / metabolism; Flowers / metabolism; Gene Expression Regulation, Plant / genetics; Indoleacetic Acids / metabolism; Meristem / embryology; Meristem / metabolism; Morphogenesis; Oxygenases; Plant Development / genetics; Plant Growth Regulators / genetics; Plant Growth Regulators / metabolism; Plant Roots / embryology; Plant Roots / genetics; Plant Roots / metabolism; Spatio-Temporal Analysis
Sources: Web Of Science, ORCID
Added: November 26, 2018
2017 journal article
Editorial: Relevance of translational regulation on plant growth and environmental responses
Frontiers in Plant Science, 8.
author keywords: mRNA translation; translation factors; post-transcriptional regulation; translatome; organellar gene expression
Source: ORCID
Added: December 19, 2019
2017 journal article
The triple response assay and its use to characterize ethylene mutants in Arabidopsis
Ethylene Signaling: Methods and Protocols, 1573, 163–209.
Source: NC State University Libraries
Added: August 6, 2018
2017 chapter
The triple response assay and its use to characterize ethylene mutants in arabidopsis
In Methods in Molecular Biology (Vol. 1573, pp. 163–209).
author keywords: Phytohormone; Ethylene; ACC; Triple response; Arabidopsis; Seedlings; Germination; Hypocotyl; Root; Apical hook; Mutants
MeSH headings : Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Biological Assay / methods; Ethylenes / metabolism; Ethylenes / pharmacology; Gene Expression Regulation, Plant / drug effects; Germination / drug effects; Germination / genetics; Mutation; Phenotype; Plant Growth Regulators / metabolism; Plant Growth Regulators / pharmacology; Seedlings / drug effects; Seedlings / genetics; Seedlings / metabolism
Source: ORCID
Added: December 19, 2019
2017 journal article
Translation regulation in plants: an interesting past, an exciting present and a promising future
PLANT JOURNAL, 90(4), 628–653.
author keywords: translation; upstream open reading frames; internal ribosomal entry sites; gene-specific translation; global regulation of translation; RNA-binding protein
MeSH headings : Gene Expression Regulation / genetics; Gene Expression Regulation / physiology; Open Reading Frames / genetics; Plants / genetics; Plants / metabolism; Protein Biosynthesis / genetics; Protein Biosynthesis / physiology; RNA, Plant / genetics; RNA, Plant / metabolism; Ribosomes / genetics; Ribosomes / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2016 article
Auxin catabolism unplugged: Role of IAA oxidation in auxin homeostasis
Stepanova, A. N., & Alonso, J. M. (2016, September 27). PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, Vol. 113, pp. 10742–10744.
MeSH headings : Arabidopsis / metabolism; Arabidopsis Proteins / metabolism; Genes, Plant; Homeostasis; Indoleacetic Acids / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2016 article
Cutting Out the Middle Man in Light-Hormone Interactions
Stepanova, A. N., & Alonso, J. M. (2016, December 5). DEVELOPMENTAL CELL, Vol. 39, pp. 524–526.
MeSH headings : Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Ethylenes / metabolism; Gene Expression Regulation, Plant; Nuclear Proteins / genetics; Transcription Factors / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018
2016 journal article
Genome-Wide Search for Translated Upstream Open Reading Frames in Arabidopsis Thaliana
IEEE Transactions on Nanobioscience, 15(2), 150–159.
author keywords: Arabidopsis thaliana; classification; ribosome foot-printing; semi-supervised learning; stacking; translation; uORF
MeSH headings : Algorithms; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Cluster Analysis; Genome, Plant; Open Reading Frames / genetics; Protein Footprinting / methods; RNA, Plant; Ribosomes / genetics; Ribosomes / metabolism; Sequence Analysis, RNA; Supervised Machine Learning
Sources: ORCID, NC State University Libraries
Added: August 6, 2018
2016 journal article
Transcriptomic Signature of the SHATTERPROOF2 Expression Domain Reveals the Meristematic Nature of Arabidopsis Gynoecial Medial Domain
PLANT PHYSIOLOGY, 171(1), 42–61.
MeSH headings : Arabidopsis / anatomy & histology; Arabidopsis / genetics; Arabidopsis Proteins / genetics; Arabidopsis Proteins / isolation & purification; Base Sequence; Chloral Hydrate; DNA, Antisense; Flowers / genetics; Gene Expression Regulation, Plant; Genome, Plant; In Situ Hybridization; Indoleacetic Acids / pharmacology; MADS Domain Proteins / genetics; MADS Domain Proteins / isolation & purification; Meristem / genetics; Meristem / growth & development; Meristem / metabolism; Microscopy, Confocal; Ovule / cytology; Ovule / growth & development; Ovule / metabolism; Protein Isoforms; Protoplasts; RNA, Plant / chemistry; RNA, Plant / isolation & purification; Seeds / growth & development; Sequence Alignment; Transcription Factors; Transcriptional Activation; Transcriptome
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 chapter
A Stacking-Based Approach to Identify Translated Upstream Open Reading Frames in Arabidopsis Thaliana
In Bioinformatics Research and Applications (Vol. 9096, pp. 138–149).
author keywords: uORF; Translation; Ribosome footprinting; Stacking; Classification; Arabidopsis thaliana
Sources: ORCID, Crossref
Added: December 19, 2019
2015 journal article
A recombineering-based gene tagging system for Arabidopsis
Methods in Molecular Biology (Clifton, N.J.), 1227, 233–243.
author keywords: Recombineering; Arabidopsis; Fluorescent protein; Lambda RED
MeSH headings : Arabidopsis / genetics; Arabidopsis / metabolism; Bacteriophage lambda / genetics; Bacteriophage lambda / metabolism; Chromosomes, Artificial, Bacterial / chemistry; Chromosomes, Artificial, Bacterial / metabolism; Cloning, Molecular; Electroporation; Escherichia coli / genetics; Escherichia coli / metabolism; Genetic Engineering / methods; Genetic Vectors / chemistry; Genetic Vectors / metabolism; Homologous Recombination; Mutagenesis
Sources: ORCID, NC State University Libraries
Added: August 6, 2018
2015 conference paper
A stacking-based approach to identify translated upstream open reading frames in Arabidopsis thaliana
Bioinformatics research and applications (isbra 2015), 9096, 138–149.
Source: NC State University Libraries
Added: August 6, 2018
2015 journal article
Gene-Specific Translation Regulation Mediated by the Hormone-Signaling Molecule EIN2
CELL, 163(3), 684–697.
MeSH headings : 3' Untranslated Regions; Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; DNA-Binding Proteins; Ethylenes / metabolism; F-Box Proteins / genetics; Gene Expression Regulation, Plant; Nuclear Proteins / metabolism; Protein Biosynthesis; RNA, Messenger / metabolism; Receptors, Cell Surface / metabolism; Ribosomes / metabolism; Signal Transduction; Transcription Factors / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 conference paper
Mining transcript features related to translation in Arabidopsis using LASSO and random forest
2015 IEEE 5th International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2015.
Sources: NC State University Libraries, ORCID
Added: August 6, 2018
2015 journal article
Plant functional genomics methods and protocols second edition preface
Plant Functional Genomics: Methods and Protocols, 2nd Edition, 1284, V-.
Source: NC State University Libraries
Added: August 6, 2018
2015 book
Plant functional genomics: Methods and protocols
In J. M. Alonso & A. N. Stepanova (Eds.), Plant Functional Genomics: Methods and Protocols: Second Edition (2nd ed., pp. 1–526).
Sources: Web Of Science, ORCID
Added: August 6, 2018
2014 book
Arabidopsis transformation with large bacterial artificial chromosomes
In Methods in Molecular Biology (Vol. 1062, pp. 271–283).
MeSH headings : Agrobacterium / genetics; Arabidopsis / genetics; Base Sequence; Chromosomes, Artificial, Bacterial / genetics; DNA Primers / genetics; DNA, Bacterial / genetics; Escherichia coli; Genome, Plant; Plants, Genetically Modified / genetics; Polymerase Chain Reaction; Transformation, Genetic
Source: ORCID
Added: December 19, 2019
2014 journal article
Genetic aspects of auxin biosynthesis and its regulation
PHYSIOLOGIA PLANTARUM, 151(1), 3–12.
MeSH headings : Arabidopsis / enzymology; Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Indoleacetic Acids / metabolism; Mixed Function Oxygenases / genetics; Mixed Function Oxygenases / metabolism; Plants / enzymology; Plants / genetics; Plants / metabolism; Tryptophan Transaminase / genetics; Tryptophan Transaminase / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Arabidopsis SABRE and CLASP interact to stabilize cell division plane orientation and planar polarity
NATURE COMMUNICATIONS, 4.
MeSH headings : Alleles; Amino Acid Sequence; Arabidopsis / cytology; Arabidopsis / physiology; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Base Sequence; Cell Division / physiology; Cell Polarity / physiology; Chromosomes, Plant; Gene Expression Regulation, Plant / physiology; Intracellular Signaling Peptides and Proteins / genetics; Intracellular Signaling Peptides and Proteins / metabolism; Microtubule-Associated Proteins / genetics; Microtubule-Associated Proteins / metabolism; Phylogeny
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 conference paper
Deep sequencing of ribosomal footprints for studying genome-wide mRNA translation in plants
2013 IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2013.
Source: ORCID
Added: December 19, 2019
2013 review
Ethylene signaling: simple ligand, complex regulation
[Review of ]. CURRENT OPINION IN PLANT BIOLOGY, 16(5), 554–560.
MeSH headings : Arabidopsis / genetics; Arabidopsis / physiology; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Ethylenes / metabolism; Gene Expression Regulation, Plant; Gene Regulatory Networks; Models, Biological; Plant Growth Regulators / metabolism; Protein Kinases / genetics; Protein Kinases / metabolism; Receptors, Cell Surface / genetics; Receptors, Cell Surface / metabolism; Signal Transduction
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Kinetic analysis of Arabidopsis glucosyltransferase UGT74B1 illustrates a general mechanism by which enzymes can escape product inhibition
BIOCHEMICAL JOURNAL, 450(1), 37–46.
author keywords: glucosinolate; glycosyltransferase; ordered binding; product inhibition; UDP-glycosyltransferase (UGT)
MeSH headings : Arabidopsis / enzymology; Arabidopsis / genetics; Arabidopsis Proteins / chemistry; Arabidopsis Proteins / metabolism; Genome, Plant; Glucosyltransferases / chemistry; Glucosyltransferases / metabolism; Kinetics; Leucine / genetics; Leucine / metabolism; Models, Molecular; Mutation; Phenotype; Plants, Genetically Modified; Serine / genetics; Serine / metabolism; Substrate Specificity; Uridine Diphosphate Glucose / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Local Auxin Sources Orient the Apical-Basal Axis in Arabidopsis Embryos
CURRENT BIOLOGY, 23(24), 2506–2512.
MeSH headings : Arabidopsis / embryology; Arabidopsis Proteins / metabolism; Body Patterning / drug effects; Indoleacetic Acids / metabolism; Indoleacetic Acids / pharmacology; Membrane Transport Proteins / metabolism; Plant Growth Regulators / metabolism; Plant Growth Regulators / pharmacology; Plant Growth Regulators / physiology; Protein Transport; Seeds / drug effects; Seeds / growth & development
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Molecular Mechanisms of EthyleneAuxin Interaction
MOLECULAR PLANT, 6(6), 1734–1737.
MeSH headings : Ethylenes / metabolism; Indoleacetic Acids / metabolism; Plant Growth Regulators / metabolism; RNA Processing, Post-Transcriptional; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018
2011 journal article
A Small-Molecule Screen Identifies l-Kynurenine as a Competitive Inhibitor of TAA1/TAR Activity in Ethylene-Directed Auxin Biosynthesis and Root Growth in Arabidopsis
The Plant Cell, 23(11), 3944–3960.
MeSH headings : Arabidopsis / drug effects; Arabidopsis / growth & development; Arabidopsis / metabolism; Arabidopsis Proteins / metabolism; Cell Nucleus / metabolism; DNA-Binding Proteins; Enzyme Inhibitors / pharmacology; Ethylenes / metabolism; Ethylenes / pharmacology; F-Box Proteins / metabolism; Indoleacetic Acids / metabolism; Indoleacetic Acids / pharmacology; Kynurenine / chemistry; Kynurenine / metabolism; Kynurenine / pharmacology; Models, Molecular; Nuclear Proteins / metabolism; Plant Roots / drug effects; Plant Roots / growth & development; Plant Roots / metabolism; Small Molecule Libraries; Transcription Factors / metabolism; Tryptophan Transaminase / antagonists & inhibitors; Tryptophan Transaminase / genetics; Tryptophan Transaminase / metabolism
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2011 journal article
A recombineering-based gene tagging system for Arabidopsis
PLANT JOURNAL, 66(4), 712–723.
author keywords: Arabidopsis; recombineering; Aux; IAA; gene tagging; fluorescent; proteins
MeSH headings : Agrobacterium tumefaciens / genetics; Agrobacterium tumefaciens / metabolism; Arabidopsis / genetics; Arabidopsis / metabolism; Chromosomes, Artificial, Bacterial / genetics; DNA Primers / genetics; Escherichia coli; Gene Expression Profiling / methods; Genetic Engineering / methods; Genetic Vectors; Green Fluorescent Proteins / metabolism; Plants, Genetically Modified / genetics; Plants, Genetically Modified / metabolism; Point Mutation; Recombination, Genetic
Sources: ORCID, Web Of Science
Added: August 6, 2018
2011 article
Bypassing Transcription: A Shortcut in Cytokinin-Auxin Interactions
Stepanova, A. N., & Alonso, J. M. (2011, October 18). DEVELOPMENTAL CELL, Vol. 21, pp. 608–610.
Sources: Web Of Science, ORCID
Added: August 6, 2018
2011 journal article
The Arabidopsis YUCCA1 Flavin Monooxygenase Functions in the Indole-3-Pyruvic Acid Branch of Auxin Biosynthesis
PLANT CELL, 23(11), 3961–3973.
MeSH headings : Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Cytochrome P-450 Enzyme System / genetics; Cytochrome P-450 Enzyme System / metabolism; Gene Knockdown Techniques; Indoleacetic Acids / metabolism; Indoles / metabolism; Oxygenases / genetics; Oxygenases / metabolism; Tryptophan Transaminase / genetics; Tryptophan Transaminase / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2009 review
Ethylene signaling and response: where different regulatory modules meet
[Review of ]. CURRENT OPINION IN PLANT BIOLOGY, 12(5), 548–555.
MeSH headings : Ethylenes / metabolism; Gene Expression Regulation, Plant; Indoleacetic Acids / metabolism; Plant Development; Plant Growth Regulators / metabolism; Plant Proteins / metabolism; Plants / metabolism; Receptors, Cell Surface / metabolism; Signal Transduction
Sources: Web Of Science, ORCID
Added: August 6, 2018
2009 journal article
Local auxin biosynthesis modulates gradient-directed planar polarity in Arabidopsis
NATURE CELL BIOLOGY, 11(6), 731–U70.
MeSH headings : Animals; Arabidopsis / anatomy & histology; Arabidopsis / metabolism; Arabidopsis Proteins / biosynthesis; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Cell Polarity; Genes, Reporter; Morphogenesis / physiology; Mutation; Plant Roots / cytology; Plant Roots / growth & development; Plants, Genetically Modified; Protein Kinases / genetics; Protein Kinases / metabolism; Recombinant Fusion Proteins / genetics; Recombinant Fusion Proteins / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2008 journal article
TAA1-Mediated Auxin Biosynthesis Is Essential for Hormone Crosstalk and Plant Development
Cell, 133(1), 177–191.
MeSH headings : Amino Acid Sequence; Arabidopsis / drug effects; Arabidopsis / embryology; Arabidopsis / genetics; Arabidopsis / metabolism; Biosynthetic Pathways; Ethylenes / pharmacology; Indoleacetic Acids / metabolism; Indoles / metabolism; Molecular Sequence Data; Mutation; Plant Roots / drug effects; Seedlings / metabolism; Sequence Alignment; Tryptophan Transaminase / chemistry; Tryptophan Transaminase / genetics; Tryptophan Transaminase / metabolism
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2007 journal article
Multilevel interactions between ethylene and auxin in Arabidopsis roots
PLANT CELL, 19(7), 2169–2185.
MeSH headings : Arabidopsis / drug effects; Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / metabolism; Binding Sites; DNA-Binding Proteins / metabolism; Ethylenes / metabolism; Ethylenes / pharmacology; Gene Expression Profiling; Genes, Plant; Genes, Reporter; Glucuronidase / metabolism; Indoleacetic Acids / metabolism; Models, Biological; Mutation / genetics; Nuclear Proteins / metabolism; Oligonucleotide Array Sequence Analysis; Plant Roots / drug effects; Plant Roots / enzymology; Plant Roots / growth & development; Plant Roots / metabolism; Promoter Regions, Genetic / genetics; Reverse Transcriptase Polymerase Chain Reaction; Transcription Factors / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2006 journal article
PCR-based screening for insertional mutants.
Methods in Molecular Biology (Clifton, N.J.), 323, 163–172. http://www.scopus.com/inward/record.url?eid=2-s2.0-33745265233&partnerID=MN8TOARS
Source: ORCID
Added: December 19, 2019
2005 journal article
A link between ethylene and auxin uncovered by the characterization of two root-specific ethylene-insensitive mutants in Arabidopsis
PLANT CELL, 17(8), 2230–2242.
MeSH headings : Anthranilate Synthase / genetics; Anthranilate Synthase / metabolism; Arabidopsis / genetics; Ethylenes / metabolism; Indoleacetic Acids / physiology; Mutation; Nitrogenous Group Transferases / genetics; Nitrogenous Group Transferases / metabolism; Plant Growth Regulators / physiology; Plant Roots / genetics; Plant Roots / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2005 journal article
Arabidopsis ethylene signaling pathway.
Science's STKE : Signal Transduction Knowledge Environment, 2005(276). http://www.scopus.com/inward/record.url?eid=2-s2.0-33644876995&partnerID=MN8TOARS
Source: ORCID
Added: December 19, 2019
2005 journal article
Ethylene signaling pathway.
Science's STKE : Signal Transduction Knowledge Environment, 2005(276). http://www.scopus.com/inward/record.url?eid=2-s2.0-33644877967&partnerID=MN8TOARS
Source: ORCID
Added: December 19, 2019
2005 journal article
Ethylene signalling and response pathway: A unique signalling cascade with a multitude of inputs and outputs
Physiologia Plantarum, 123(2), 195–206.
Sources: NC State University Libraries, ORCID
Added: August 6, 2018
2005 journal article
Ethylene signalling and response pathway: A unique signalling cascade with a multitude of inputs and outputs
Physiologia Plantarum, 123(2), 195–206.
Source: ORCID
Added: December 19, 2019
2004 journal article
Convergence of signaling pathways in the control of differential cell growth in Arabidopsis
Developmental Cell, 7(2), 193–204.
MeSH headings : ADP-Ribosylation Factors / genetics; Alleles; Arabidopsis / genetics; Arabidopsis / physiology; Cell Division; Cloning, Molecular; Ethylenes / pharmacology; Gene Expression Regulation, Plant; Immunoblotting; In Situ Hybridization; Indoleacetic Acids / metabolism; Models, Biological; Models, Genetic; Mutagenesis; Mutation; Phenotype; Plant Proteins / physiology; Plants, Genetically Modified; Plasmids / metabolism; RNA / metabolism; Saccharomyces cerevisiae Proteins; Signal Transduction; Time Factors; Transcription, Genetic
Source: ORCID
Added: December 19, 2019
2004 journal article
Short-term growth responses to ethylene in arabidopsis seedlings are EIN3/EIL1 independent
PLANT PHYSIOLOGY, 136(2), 2921–2927.
MeSH headings : Adaptation, Physiological; Arabidopsis / drug effects; Arabidopsis / growth & development; Arabidopsis Proteins / physiology; Cyclopropanes / pharmacology; DNA-Binding Proteins; Dose-Response Relationship, Drug; Ethylenes / antagonists & inhibitors; Ethylenes / pharmacology; Gene Expression Regulation, Plant; Nuclear Proteins / physiology; Plant Growth Regulators / physiology; Receptors, Cell Surface / physiology; Seedlings / drug effects; Seedlings / growth & development; Time Factors; Transcription Factors / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2004 journal article
The ethylene signaling pathway
SCIENCE, 306(5701), 1513–1515.
MeSH headings : Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Cell Nucleus / metabolism; DNA-Binding Proteins; Ethylenes / metabolism; Models, Biological; Mutation; Nuclear Proteins / genetics; Nuclear Proteins / metabolism; Plant Proteins / chemistry; Plant Proteins / metabolism; Plants / genetics; Plants / metabolism; Receptors, Cell Surface / chemistry; Receptors, Cell Surface / metabolism; SKP Cullin F-Box Protein Ligases / metabolism; Signal Transduction; Transcription Factors / genetics; Transcription Factors / metabolism; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018
2003 journal article
Five components of the ethylene-response pathway identified in a screen for weak ethylene-insensitive mutants in Arabidopsis
Proceedings of the National Academy of Sciences of the United States of America, 100(5), 2992–2997.
MeSH headings : Alleles; Arabidopsis / genetics; Arabidopsis / metabolism; Botrytis / growth & development; Botrytis / pathogenicity; Ethylenes / pharmacology; Gene Expression Regulation, Plant / drug effects; Genes, Dominant; Genetic Complementation Test; Genetic Techniques; Genotype; Mitosporic Fungi / growth & development; Mitosporic Fungi / pathogenicity; Models, Genetic; Mutagenesis, Site-Directed; Mutation; Plant Diseases / genetics; Plant Diseases / microbiology; Plant Growth Regulators / pharmacology; Polymerase Chain Reaction; Signal Transduction
Source: ORCID
Added: December 19, 2019
2003 journal article
Genome-wide insertional mutagenesis of Arabidopsis thaliana
Science, 301(5633), 653–657.
MeSH headings : 3' Untranslated Regions; 5' Untranslated Regions; Alleles; Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Base Composition; Chromosomes, Plant / genetics; DNA, Bacterial / genetics; DNA, Plant / chemistry; DNA, Plant / genetics; Ethylenes / pharmacology; Exons; Expressed Sequence Tags; Gene Expression; Gene Expression Profiling; Gene Expression Regulation, Plant / drug effects; Genes, Plant; Genome, Plant; Introns; Mutagenesis, Insertional; Mutation; Oligonucleotide Array Sequence Analysis; Promoter Regions, Genetic; Recombination, Genetic; Rhizobium / genetics
Source: ORCID
Added: December 19, 2019
2003 chapter
T-DNA mutagenesis in Arabidopsis
In Plant functional genomics.
MeSH headings : Arabidopsis / genetics; Arabidopsis / growth & development; DNA, Bacterial / genetics; Genetic Techniques; Indicators and Reagents; Mutagenesis, Insertional / methods; Rhizobium / genetics; Transformation, Genetic
Source: NC State University Libraries
Added: August 6, 2018
2003 journal article
T-DNA mutagenesis in Arabidopsis.
Methods in Molecular Biology (Clifton, N.J.), 236, 177–188. http://www.scopus.com/inward/record.url?eid=2-s2.0-1542548233&partnerID=MN8TOARS
Source: ORCID
Added: December 19, 2019
2000 journal article
Ethylene signaling: From mutants to molecules
Current Opinion in Plant Biology, 3(5), 353–360.
MeSH headings : Arabidopsis / physiology; Ethylenes / metabolism; Mutation; Plant Growth Regulators / metabolism; Signal Transduction
Source: ORCID
Added: December 19, 2019
1998 journal article
Nuclear events in ethylene signaling: A transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1
Genes and Development, 12(23), 3703–3714.
author keywords: plants; Arabidopsis; EIN3; ERF1; transcription
MeSH headings : Amino Acid Sequence; Arabidopsis; Arabidopsis Proteins; Cell Nucleus / metabolism; Cloning, Molecular; DNA-Binding Proteins / genetics; DNA-Binding Proteins / metabolism; Dimerization; Ethylenes / metabolism; Gene Expression Regulation, Plant; Models, Genetic; Molecular Sequence Data; Nuclear Proteins / metabolism; Plant Growth Regulators / metabolism; Promoter Regions, Genetic; Response Elements; Sequence Analysis, DNA; Sequence Homology, Amino Acid; Signal Transduction; Transcription Factors / genetics; Transcription Factors / metabolism; Transcription, Genetic
Source: ORCID
Added: December 19, 2019
Employment
Updated: June 3rd, 2019 15:48
2019 - present
North Carolina State University Raleigh, NC, US
Associate Professor
Plant and Microbial Biology
2014 - 2019
North Carolina State University Raleigh, NC, US
Assistant Professor
Plant and Microbial Biology
2009 - 2013
North Carolina State University Raleigh, NC, US
Research Assistant Professor
Genetics
2003 - 2009
North Carolina State University Raleigh, NC, US
Research Associate
Genetics
2001 - 2003
North Carolina State University Raleigh, NC, US
Postdoctoral fellow
Genetics
Education
Updated: October 11th, 2019 13:37
1995 - 2001
University of Pennsylvania Philadelphia, PA, US
PhD
Biology
1993 - 1995
University of Nevada Reno Reno, NV, US
BS
Biology
1990 - 1995
N. I. Lobachevsky State University of Nizhny Novgorod Nizhny Novgorod, RU
BS/MS
Biology
