Works (5)

Updated: July 5th, 2023 15:40

2020 journal article

Dynamic Changes in the Microbiome of Rice During Shoot and Root Growth Derived From Seeds

FRONTIERS IN MICROBIOLOGY, 11.

By: M. Wang n, A. Eyre n, M. Thon*, Y. Oh n & R. Dean n

author keywords: rice; seed and seedling; microbiome; diversity; driving factors
TL;DR: The microbiome in rice seedlings derived directly from seeds was identified, characterized and compared to the microbiome of the seed, finding greater abundance and diversity were detected for the microbiome associated with roots compared to shoots and with more epiphytes than endophytes. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science; OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: October 19, 2020

2019 journal article

Identification and Characterization of the Core Rice Seed Microbiome

PHYTOBIOMES JOURNAL, 3(2), 148–157.

By: A. Eyre n, M. Wang n, Y. Oh n & R. Dean n

author keywords: endophytes; metagenomics; microbiome; microorganism
TL;DR: These core members represent valuable candidates for manipulating the rice microbiome, decreasing the use of chemicals while increasing plant performance. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science; OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: May 26, 2020

2017 journal article

Identification and characterization of suppressors of plant cell death (SPD) effectors from Magnaporthe oryzae

MOLECULAR PLANT PATHOLOGY, 18(6), 850–863.

By: W. Sharpee n, Y. Oh n, M. Yi*, W. Franck n, A. Eyre n, L. Okagaki n, B. Valent*, R. Dean n

author keywords: effector; rice blast; suppressor
MeSH headings : Fungal Proteins / genetics; Fungal Proteins / metabolism; Host-Pathogen Interactions; Magnaporthe / metabolism; Magnaporthe / pathogenicity; Plant Diseases / genetics; Plant Diseases / microbiology; Plant Leaves / metabolism; Plant Leaves / microbiology; Tobacco / metabolism; Tobacco / microbiology
TL;DR: A series of effectors that probably act at different stages of the infection process and contribute to the virulence of M. oryzae are identified, some of which were previously unknown or whose function was unknown. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
3. Good Health and Well-being (OpenAlex)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2016 journal article

Comparative genome analysis and genome evolution of members of the magnaporthaceae family of fungi

BMC GENOMICS, 17.

By: L. Okagaki n, J. Sailsbery n, A. Eyre n & R. Dean n

author keywords: Magnaporthaceae; Magnaporthe; Gaeumannomyces; Two-speed genome; Zig zag model; Comparative genomics; CAzymes; Transcription factors; Diversifying selection; Purifying selection
MeSH headings : Ascomycota / classification; Ascomycota / genetics; Biological Evolution; Comparative Genomic Hybridization; Fungal Proteins / genetics; Genome, Fungal; Magnaporthe / genetics; Multigene Family; Phylogeny; Proteome; Species Specificity; Transcription Factors / genetics
TL;DR: Data show that at the genome level, there is no evidence to suggest multi-speed genome evolution or that proximity to repetitive elements play a role in diversification of genes. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2015 journal article

Phosphoproteome Analysis Links Protein Phosphorylation to Cellular Remodeling and Metabolic Adaptation during Magnaporthe oryzae Appressorium Development

Journal of Proteome Research, 14(6), 2408–2424.

By: W. Franck n, E. Gokce n, S. Randall n, Y. Oh n, A. Eyre n, D. Muddiman n, R. Dean n

author keywords: Magnaporthe oryzae; quantitative phosphoproteomics; appressorium formation; network analysis; transcription factors
MeSH headings : Adaptation, Physiological; Basic Helix-Loop-Helix Transcription Factors / metabolism; Chromatography, Liquid; Fungal Proteins / metabolism; Magnaporthe / metabolism; Magnaporthe / physiology; Oryza / microbiology; Phosphoproteins / metabolism; Phosphorylation; Proteomics; Signal Transduction; Tandem Mass Spectrometry
TL;DR: Network analysis incorporating regulation from transcriptomic, proteomic, and phosphoproteomic data revealed new insights into the regulation of the metabolism of conidial storage reserves and phospholipids, autophagy, actin dynamics, and cell wall metabolism during appressorium formation. (via Semantic Scholar)
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018

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