Works (25)

Updated: August 18th, 2023 05:00

2023 article

Development of NIRS calibration curves for sugars in baked sweetpotato

Amankwaah, V. A., Williamson, S., Reynolds, R., Ibrahem, R., Pecota, K. V., Zhang, X., … Yencho, G. C. (2023, July 12). JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE, Vol. 7.

By: V. Amankwaah n, S. Williamson n, R. Reynolds n, R. Ibrahem n, K. Pecota n, X. Zhang*, B. Olukolu*, V. Truong n ...

author keywords: sweetpotato storage roots; NIRS; high-throughput phenotyping; consumer preferences; nutritional quality; storage root
Sources: Web Of Science, ORCID
Added: July 24, 2023

2023 journal article

Genetic diversity, population structure, and selection of breeder germplasm subsets from the USDA sweetpotato (Ipomoea batatas) collection

FRONTIERS IN PLANT SCIENCE, 13.

By: T. Slonecki*, W. Rutter*, B. Olukolu*, G. Yencho n, D. Jackson* & P. Wadl*

author keywords: sweetpotato; convolvulaceae; USDA germplasm; SNPs; DAPC; breeder subsets; genotyping-by-sequencing (GBS); polyploid
Sources: Web Of Science, ORCID
Added: March 20, 2023

2023 article

Interrelations of & alpha;- and & beta;-amylase activity with starch, sugars, and culinary and nutritional quality attributes in sweetpotato storage roots

Amankwaah, V. A. A., Williamson, S., Olukolu, B. A. A., Truong, V.-D., Carey, E., Ssali, R., & Yencho, G. C. (2023, July 27). Interrelations of & alpha;- and & beta;-amylase activity with starch, sugars, and culinary and nutritional quality attributes in sweetpotato storage roots. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE, Vol. 7.

By: V. Amankwaah n, S. Williamson n, B. Olukolu*, V. Truong n, E. Carey, R. Ssali*, G. Yencho n

author keywords: sweetpotato; consumer preferences; curing; root storage; root quality traits
Sources: Web Of Science, ORCID
Added: July 27, 2023

2022 journal article

A chromosome-length genome assembly and annotation of blackberry (Rubus argutus, cv. “Hillquist”)

G3 Genes|Genomes|Genetics, 11.

By: T. Brůna*, R. Aryal n, O. Dudchenko*, D. Sargent*, D. Mead*, M. Buti*, A. Cavallini*, T. Hytönen* ...

Ed(s): T. Pyhäjärvi

author keywords: Rubus; blackberry; Rosaceae; Rosoideae; biennial flowering; annual flowering; primocane-fruiting; chromosome-length genome assembly; Hi-C; annotation; repetitive content
MeSH headings : Rubus / genetics; Tetraploidy; Plant Breeding; Chromosome Mapping; Chromosomes, Plant / genetics; Molecular Sequence Annotation
Sources: Web Of Science, Crossref, ORCID
Added: December 16, 2022

2022 journal article

Combining ability and heritability analysis of sweetpotato weevil resistance, root yield, and dry matter content in sweetpotato

Frontiers in Plant Science, 13.

By: I. Mugisa*, J. Karungi*, P. Musana*, R. Odama*, A. Alajo*, D. Chelangat*, M. Anyanga*, B. Oloka* ...

author keywords: clones; crosses; families; mixed models; Cylas spp; Ipomoea batatas
Sources: Web Of Science, ORCID, Crossref
Added: October 3, 2022

2021 journal article

A conserved genetic architecture among populations of the maize progenitor, teosinte, was radically altered by domestication

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 118(43).

By: Q. Chen, L. Samayoa, C. Yang, B. Olukolu, A. York, J. Sanchez-Gonzalez, W. Xue, J. Glaubitz ...

author keywords: maize; teosinte; domestication; evolution; selection
Sources: Web Of Science, ORCID
Added: December 13, 2021

2021 journal article

Discovery of a major QTL for root-knot nematode (Meloidogyne incognita) resistance in cultivated sweetpotato (Ipomoea batatas)

Theoretical and Applied Genetics, 134(7), 1945–1955.

By: B. Oloka n, G. da Silva Pereira*, V. Amankwaah n, M. Mollinari n, K. Pecota n, B. Yada*, B. Olukolu*, Z. Zeng n, G. Yencho n

MeSH headings : Animals; Chromosome Mapping; Disease Resistance / genetics; Genetic Linkage; Genotype; Ipomoea batatas / genetics; Ipomoea batatas / parasitology; Plant Diseases / genetics; Plant Diseases / parasitology; Polymorphism, Single Nucleotide; Quantitative Trait Loci; Tylenchoidea / pathogenicity
Sources: Web Of Science, ORCID, Crossref
Added: April 4, 2021

2021 journal article

Domestication reshaped the genetic basis of inbreeding depression in a maize landrace compared to its wild relative, teosinte

PLOS GENETICS, 17(12).

MeSH headings : Domestication; Genes, Plant; Genetic Variation / genetics; Inbreeding Depression / genetics; Phenotype; Plant Breeding; Plant Proteins / genetics; Quantitative Trait Loci / genetics; Selection, Genetic / genetics; Zea mays / genetics; Zea mays / growth & development
Sources: Web Of Science, ORCID
Added: February 28, 2022

2021 journal article

ngsComposer: an automated pipeline for empirically based NGS data quality filtering

BRIEFINGS IN BIOINFORMATICS, 22(5).

By: R. Kuster*, G. Yencho* & B. Olukolu*

author keywords: quality score; demultiplexing; buffer sequence; qRRS (quantitative reduced representation sequencing); short-read pre-processing; OmeSeq
MeSH headings : Algorithms; Computational Biology / methods; Computer Simulation; High-Throughput Nucleotide Sequencing / methods; Humans; Reproducibility of Results; Sequence Analysis, DNA / methods; Software
Sources: Web Of Science, ORCID
Added: November 23, 2021

2020 journal article

Assembly of whole-chromosome pseudomolecules for polyploid plant genomes using outbred mapping populations

Nature Genetics, 52(11), 1256–1264.

MeSH headings : Algorithms; Chromosomes, Plant; Computer Simulation; Genetic Linkage; Genome, Plant; Genotype; Ipomoea / genetics; Plant Breeding; Poaceae / genetics; Polyploidy; Protein Array Analysis; Solanum tuberosum / genetics
Sources: Web Of Science, Crossref, ORCID
Added: November 24, 2020

2020 journal article

The genetic architecture of the maize progenitor, teosinte, and how it was altered during maize domestication

PLOS GENETICS, 16(5).

By: Q. Chen*, L. Samayoa n, C. Yang*, P. Bradbury*, B. Olukolu*, M. Neumeyer*, M. Romay*, Q. Sun* ...

MeSH headings : Domestication; Gene Flow; Gene Frequency; Genes, Plant; Genetic Variation; Genetics, Population; Quantitative Trait Loci; Quantitative Trait, Heritable; Selection, Genetic; Zea mays / classification; Zea mays / genetics
Sources: Web Of Science, ORCID
Added: June 22, 2020

2018 journal article

Genetic Diversity and Population Structure of the USDA Sweetpotato (Ipomoea batatas) Germplasm Collections Using GBSpoly

Frontiers in Plant Science, 9.

By: P. Wadl*, B. Olukolu n, S. Branham*, R. Jarret*, G. Yencho n & D. Jackson*

author keywords: Convolvulaceae; genotyping-by-sequencing; GBSpoly; polyploid; SNPs; sweetpotato; USDA germplasm
Sources: Web Of Science, ORCID, Crossref
Added: October 19, 2018

2018 journal article

Genome sequences of two diploid wild relatives of cultivated sweetpotato reveal targets for genetic improvement

Nature Communications, 9(1).

By: S. Wu*, K. Lau*, Q. Cao*, J. Hamilton*, H. Sun*, C. Zhou*, L. Eserman*, D. Gemenet* ...

MeSH headings : Base Sequence; Carotenoids / metabolism; Diploidy; Ecotype; Genetic Variation; Genome, Plant; Genomics; Ipomoea batatas / genetics; Molecular Sequence Annotation; Multigene Family; Phylogeny; Plant Breeding; Polyploidy; Repetitive Sequences, Nucleic Acid / genetics
Sources: Web Of Science, ORCID, Crossref
Added: November 26, 2018

2018 journal article

Identification of a locus in maize controlling response to a host-selective toxin derived from Cochliobolus heterostrophus, causal agent of southern leaf blight

Theoretical and Applied Genetics, 131(12), 2601–2612.

By: X. Xiaodong n, B. Olukolu n, Q. Yang n & P. Balint-Kurti n

MeSH headings : Alleles; Ascomycota / pathogenicity; Chromosome Mapping; Genetic Association Studies; Host-Pathogen Interactions / genetics; Mycotoxins; Plant Diseases / genetics; Plant Diseases / microbiology; Quantitative Trait Loci; Zea mays / genetics; Zea mays / microbiology
Sources: Web Of Science, ORCID, Crossref
Added: December 3, 2018

2016 journal article

A Genome-Wide Association Study for Partial Resistance to Maize Common Rust

PHYTOPATHOLOGY, 106(7), 745–751.

author keywords: association analysis; disease resistance; linkage disequilibrium; QTL
MeSH headings : Basidiomycota / physiology; Genome-Wide Association Study; Host-Pathogen Interactions; Plant Diseases / immunology; Plant Immunity / genetics; Zea mays / genetics; Zea mays / immunology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2016 journal article

The Genetics of Leaf Flecking in Maize and Its Relationship to Plant Defense and Disease Resistance

Plant Physiology, 172(3), 1787–1803.

MeSH headings : Alleles; Chromosome Mapping; Disease Resistance / genetics; Genetics, Population; Genome-Wide Association Study; Inbreeding; Light; Phenotype; Plant Diseases / genetics; Plant Diseases / immunology; Plant Leaves / genetics; Plant Leaves / radiation effects; Polymorphism, Single Nucleotide / genetics; Quantitative Trait Loci / genetics; Reactive Oxygen Species / metabolism; Seeds / genetics; Zea mays / genetics; Zea mays / radiation effects
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2015 journal article

Genome-wide association study reveals a set of genes associated with resistance to the Mediterranean corn borer (Sesamia nonagrioides L.) in a maize diversity panel

BMC PLANT BIOLOGY, 15(1).

author keywords: Candidate genes; Corn borer; Genome-wide association study; Insect resistance; Maize; Mixed linear models; Sesamia nonagrioides
MeSH headings : Animals; Genes, Plant; Genome-Wide Association Study; Moths / physiology; Polymorphism, Single Nucleotide; Zea mays / genetics; Zea mays / parasitology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

Maize homologs of hydroxycinnamoyltransferase, a key enzyme in lignin biosynthesis, bind the nucleotide binding leucine-rich repeat Rp1 proteins to modulate the defense response

Plant Physiology, 169(3), 2230–2243.

By: G. Wang, Y. He, R. Strauch, B. Olukolu, D. Nielsen, X. Li, P. Balint-Kurti

Source: NC State University Libraries
Added: August 6, 2018

2015 journal article

Substantial genome synteny preservation among woody angiosperm species: comparative genomics of Chinese chestnut (Castanea mollissima) and plant reference genomes

BMC GENOMICS, 16.

By: M. Staton*, T. Zhebentyayeva*, B. Olukolu n, G. Fang*, D. Nelson*, J. Carlson*, A. Abbott

author keywords: Chestnut; Comparative genomics; Blight resistance; Synteny; Plant genomics; Physical map; Genetic map
MeSH headings : Computational Biology; Evolution, Molecular; Genome, Plant; Genomics / methods; Magnoliopsida / classification; Magnoliopsida / genetics; Phylogeny; Physical Chromosome Mapping; Quantitative Trait Loci; Synteny / genetics
Source: Web Of Science
Added: August 6, 2018

2015 journal article

The genetic basis of flecking and its relationship to disease resistance in the IBM maize mapping population

THEORETICAL AND APPLIED GENETICS, 128(11), 2331–2339.

By: V. Vontimitta*, B. Olukolu n, B. Penning*, G. Johal* & P. Balint-Kurti n

MeSH headings : Chromosome Mapping; Crosses, Genetic; DNA, Plant / genetics; Disease Resistance / genetics; Phenotype; Plant Diseases / genetics; Plant Leaves; Quantitative Trait Loci; Zea mays / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2013 journal article

A Connected Set of Genes Associated with Programmed Cell Death Implicated in Controlling the Hypersensitive Response in Maize

GENETICS, 193(2), 609-+.

By: B. Olukolu*, A. Negeri, R. Dhawan, B. Venkata*, P. Sharma*, A. Garg*, E. Gachomo*, S. Marla* ...

MeSH headings : Alleles; Apoptosis / genetics; Crosses, Genetic; Disease Resistance / genetics; Genes, Plant; Genetic Markers; Genetic Variation; Genome-Wide Association Study; Linear Models; Linkage Disequilibrium; Phenotype; Physical Chromosome Mapping; Polymorphism, Single Nucleotide; Zea mays / genetics; Zea mays / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2013 journal article

A physical map of the Chinese chestnut (Castanea mollissima) genome and its integration with the genetic map

TREE GENETICS & GENOMES, 9(2), 525–537.

By: G. Fang*, B. Blackmon*, M. Staton*, C. Nelson*, T. Kubisiak*, B. Olukolu n, D. Henry*, T. Zhebentyayeva* ...

author keywords: Castanea spp.; Chestnut; BAC library; HICF fingerprinting; Physical map; Comparative genomics; Chestnut blight resistance
Sources: Web Of Science, ORCID
Added: August 6, 2018

2012 journal article

A transcriptome-based genetic map of Chinese chestnut (Castanea mollissima) and identification of regions of segmental homology with peach (Prunus persica)

Tree Genetics & Genomes, 9(2), 557–571.

By: T. Kubisiak*, C. Nelson*, M. Staton*, T. Zhebentyayeva*, C. Smith n, B. Olukolu*, G. Fang*, F. Hebard* ...

author keywords: Fagaceae; Castanea spp.; Chestnut; Genetic map; Comparative genomics; Disease resistance
Sources: Crossref, Web Of Science
Added: August 6, 2018

2011 journal article

Genetic diversity in Bambara groundnut (Vigna subterranea (L.) Verdc.) as revealed by phenotypic descriptors and DArT marker analysis

Genetic Resources and Crop Evolution, 59(3), 347–358.

By: B. Olukolu*, S. Mayes*, F. Stadler*, N. Quat Ng, I. Fawole*, D. Dominique*, S. Azam-Ali*, A. Abbott*, C. Kole*

author keywords: Germplasm; Phylogeny; Population structure; Vigna subterranea
Source: Crossref
Added: June 6, 2020

2010 journal article

Comparison of gene order in the chromosome region containing a TERMINAL FLOWER 1 homolog in apricot and peach reveals microsynteny across angiosperms

Plant Science, 179(4), 390–398.

By: H. Liang*, T. Zhebentyayeva*, B. Olukolu*, D. Wilde*, G. Reighard* & A. Abbott*

author keywords: Apricot; BAC contig; Gene order; Microsynteny; Peach; TFL1
Source: Crossref
Added: June 6, 2020