Works (79)

2021 journal article

Toward genetic modification of plant-parasitic nematodes: delivery of macromolecules to adults and expression of exogenous mRNA in second stage juveniles

G3-GENES GENOMES GENETICS, 11(2).

Sources: Web Of Science, ORCID
Added: June 10, 2021

2020 journal article

A Single, Shared Triploidy in Three Species of Parasitic Nematodes

G3-GENES GENOMES GENETICS, 10(1), 225–233.

By: A. Schoonmaker, Y. Hao, D. Bird & G. Conant

Sources: Web Of Science, ORCID
Added: January 21, 2020

2020 journal article

Bacterial Community Structure Dynamics in Meloidogyne incognita-Infected Roots and Its Role in Worm-Microbiome Interactions

MSPHERE, 5(4).

By: T. Yergaliyev*, R. Alexander-Shani*, H. Dimerets*, S. Pivonia*, D. Bird, S. Rachmilevitch*, A. Szitenberg*

Sources: Web Of Science, ORCID
Added: September 28, 2020

2020 journal article

Infection by cyst nematodes induces rapid remodelling of developing xylem vessels in wheat roots

SCIENTIFIC REPORTS, 10(1).

Sources: Web Of Science, ORCID
Added: July 20, 2020

2018 journal article

Identification of Cytauxzoon felis antigens via protein microarray and assessment of expression library immunization against cytauxzoonosis

Clinical Proteomics, 15(1).

By: M. Schreeg, H. Marr, J. Tarigo, M. Sherrill*, H. Outi*, E. Scholl n, D. Bird, A. Vigil* ...

Sources: NC State University Libraries, ORCID
Added: January 14, 2019

2017 journal article

Disparate gain and loss of parasitic abilities among nematode lineages

PLoS ONE, 12(9).

By: M. Holterman*, A. Karegar*, P. Mooijman*, H. Megen*, S. Elsen*, M. Vervoort*, C. Quist*, G. Karssen* ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2017 journal article

Networks Underpinning Symbiosis Revealed Through Cross-Species eQTL Mapping

Genetics, 206(4), 2175–2184.

By: Y. Guo, S. Fudali*, J. Gimeno*, P. DiGennaro n, S. Chang, V. Williamson*, D. Bird, D. Nielsen

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2016 journal article

Genetic drift, not life history or RNAi, determine long-Term evolution of transposable elements

Genome Biology and Evolution, 8(9), 2964–2978.

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2016 journal article

Mitochondrial genome sequences and structures aid in the resolution of Piroplasmida phylogeny

PLoS ONE, 11(11).

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2016 journal article

PCR amplification of a multi-copy mitochondrial gene (cox3) improves detection of Cytauxzoon felis infection as compared to a ribosomal gene (18S)

Veterinary Parasitology, 225, 123–130.

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2015 book

Exploiting solved genomes of plant-parasitic nematodes to understand parasitism

In Advances in Botanical Research (Vol. 73, pp. 241–258).

By: D. Bird, V. Williamson* & C. Opperman n

Source: ORCID
Added: January 30, 2020

2015 journal article

Signatures of adaptation to plant parasitism in nematode genomes

Parasitology, 142(S1), S71–S84.

Sources: NC State University Libraries, ORCID, Crossref
Added: August 6, 2018

2015 journal article

The plant parasite Pratylenchus coffeae carries a minimal nematode genome

Nematology, 17(6), 621–637.

By: M. Burke n, E. Scholl n, D. Bird n, J. Schaff, S. Colman*, R. Crowell*, S. Diener*, O. Gordon* ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2013 journal article

A Novel Candidate Vaccine for Cytauxzoonosis Inferred from Comparative Apicomplexan Genomics

PLoS ONE, 8(8).

By: J. Tarigo, E. Scholl, D. Bird n, C. Brown*, L. Cohn*, G. Dean n, M. Levy, D. Doolan* ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2013 journal article

Solution NMR studies of the plant peptide hormone CEP inform function

FEBS Letters, 587(24), 3979–3985.

By: B. Bobay n, P. Digennaro n, E. Scholl n, N. Imin*, M. Djordjevic* & D. McK Bird n

Source: ORCID
Added: January 30, 2020

2012 journal article

A sequence-anchored linkage map of the plant-parasitic nematode meloidogyne hapla reveals exceptionally high genome-wide recombination

G3: Genes, Genomes, Genetics, 2(7), 815–824.

By: V. Thomas*, S. Fudali*, J. Schaff*, Q. Liu*, E. Scholl*, C. Opperman*, D. Bird, V. Williamson*

Source: ORCID
Added: January 30, 2020

2011 journal article

Abstracts of NEMASYM: The Third Nematode-Bacteria Symbioses Research Coordination Network Meeting

Symbiosis, 55(3), 97–109.

Sources: Crossref, ORCID
Added: February 12, 2020

2011 journal article

Computational and phylogenetic validation of nematode horizontal gene transfer

BMC Biology, 9.

By: E. Scholl & D. Bird

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2011 journal article

RNAi effector diversity in nematodes

PLoS Neglected Tropical Diseases, 5(6).

By: J. Dalzell*, P. McVeigh*, N. Warnock*, M. Mitreva*, D. Bird, P. Abad*, C. Fleming*, T. Day* ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2010 journal article

Proteomic and Bioinformatic Analysis of the Root-Knot Nematode Meloidogyne hapla: The Basis for Plant Parasitism

Journal of Proteome Research, 9(10), 5370–5381.

By: F. Mbeunkui, E. Scholl n, C. Opperman, M. Goshe & D. Bird

Sources: NC State University Libraries, ORCID, Crossref
Added: August 6, 2018

2010 journal article

Unifying themes in microbial associations with animal and plant hosts described using the gene ontology

Microbiology and Molecular Biology Reviews, 74(4), 479–503.

By: T. Torto-Alalibo*, C. Collmer*, M. Gwinn-Giglio*, M. Lindeberg*, S. Meng, M. Chibucos*, T. Tseng*, J. Lomax* ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2009 journal article

Common and contrasting themes in host cell-targeted effectors from bacterial, fungal, oomycete and nematode plant symbionts described using the Gene Ontology

BMC Microbiology, 9(SUPPL. 1).

By: T. Torto-Alalibo*, C. Collmer*, M. Lindeberg*, D. Bird, A. Collmer* & B. Tyler*

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2009 book

Genomic analysis of the root-knot nematode genome

In Plant Cell Monographs (Vol. 15, pp. 221–237).

By: C. Opperman, D. Bird & J. Schaff

Source: ORCID
Added: January 30, 2020

2009 book

Plant infection by root-knot nematode

In Plant Cell Monographs (Vol. 15, pp. 1–13).

By: D. Bird, C. Opperman n & V. Williamson*

Source: ORCID
Added: January 30, 2020

2009 book

The genomes of root-knot nematodes

In Annual Review of Phytopathology (Vol. 47, pp. 333–351).

By: D. Bird n, V. Williamson*, P. Abad*, J. McCarter, E. Danchin*, P. Castagnone-Sereno*, C. Opperman

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2009 review

The secret(ion) life of worms

[Review of ]. Genome Biology, 10(1).

By: D. Bird & C. Opperman

Source: NC State University Libraries
Added: August 6, 2018

2009 journal article

The secret(ion) life of worms.

Genome Biology, 10(1), 205. http://www.scopus.com/inward/record.url?eid=2-s2.0-69449107507&partnerID=MN8TOARS

By: D. Bird & C. Opperman

Source: ORCID
Added: January 30, 2020

2008 journal article

A sequence-anchored genetic linkage map for the moss, Physcomitrella patens

Plant Journal, 56(5), 840–854.

By: J. Schaff, F. Mbeunkui, K. Blackburn, D. Bird & M. Goshe

Source: NC State University Libraries
Added: August 6, 2018

2008 journal article

SILIP: A novel stable isotope labeling method for in planta quantitative proteomic analysis

Plant Journal, 56(5), 840–854.

By: J. Schaff n, F. Mbeunkui n, K. Blackburn n, D. Bird n & M. Goshe n

Source: ORCID
Added: January 30, 2020

2008 journal article

Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism

Proceedings of the National Academy of Sciences of the United States of America, 105(39), 14802–14807.

By: C. Opperman, D. Bird, V. Williamson, D. Rokhsar, M. Burke, J. Cohn, J. Cromer, S. Diener ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2007 journal article

Comprehensive Transcriptome Profiling in Tomato Reveals a Role for Glycosyltransferase in Mi-Mediated Nematode Resistance

Plant Physiology, 144(2), 1079–1092.

By: J. Schaff, D. Nielsen, C. Smith, E. Scholl & D. Bird

Sources: NC State University Libraries, ORCID, Crossref
Added: August 6, 2018

2007 journal article

Divergent evolution of arrested development in the dauer stage of Caenorhabditis elegans and the infective stage of Heterodera glycines

Genome Biology, 8(10).

By: A. Elling*, M. Mitreva*, J. Recknor*, X. Gai*, J. Martin*, T. Maier*, J. McDermott*, T. Hewezi* ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2006 journal article

A method for generating Meloidogyne incognita males

Journal of Nematology, 38(2), 192–194. http://www.scopus.com/inward/record.url?eid=2-s2.0-33750134280&partnerID=MN8TOARS

By: D. Snyder, C. Opperman & D. Bird

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2006 journal article

A method for isolation of Pasteuria penetrans endospores for bioassay and genomic studies

Journal of Nematology, 38(1), 165–167. http://www.scopus.com/inward/record.url?eid=2-s2.0-34248330929&partnerID=MN8TOARS

By: J. Waterman, D. Bird & C. Opperman

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2006 journal article

A white paper on nematode comparative genomics

Journal of Nematology, 37(4), 408–416.

By: D. Bird, M. Blaxter, J. McCarter, M. Mitreva, P. Sternberg & W. Thomas

Source: NC State University Libraries
Added: August 6, 2018

2006 journal article

Detection of putative secreted proteins in the plant-parasitic nematode Heterodera schachtii

Parasitology Research, 98(5), 414–424.

Source: ORCID
Added: January 30, 2020

2006 journal article

Nematode gene sequences: Update for December 2005

Journal of Nematology, 37(4), 417–421.

By: J. McCarter, D. Bird & M. Mitreva

Source: NC State University Libraries
Added: August 6, 2018

2005 journal article

A white paper on nematode comparative genomics

Journal of Nematology, 37(4), 408–416. http://www.scopus.com/inward/record.url?eid=2-s2.0-33744994353&partnerID=MN8TOARS

By: D. Bird, M. Blaxter, J. McCarter, M. Mitreva, P. Sternberg & W. Thomas

Source: ORCID
Added: January 30, 2020

2005 journal article

Comparative genomics of nematodes

Trends in Genetics, 21(10), 573–581.

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2005 journal article

Model systems in agriculture: Lessons from worms

Annals of Applied Biology, 146(2), 147–154.

By: D. Bird

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2005 journal article

Nematode gene sequences: Update for December 2005

Journal of Nematology, 37(4), 417–421. http://www.scopus.com/inward/record.url?eid=2-s2.0-33744980477&partnerID=MN8TOARS

By: J. McCarter, D. Bird & M. Mitreva

Source: ORCID
Added: January 30, 2020

2005 journal article

Phylogenetic analysis of Pasteuria penetrans by use of multiple genetic loci

Journal of Bacteriology, 187(16), 5700–5708.

By: L. Charles n, I. Carbone, K. Davies*, D. Bird, M. Burke, B. Kerry*, C. Opperman

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2005 journal article

Resolving tylenchid evolutionary relationships through multiple gene analysis derived from EST data

Molecular Phylogenetics and Evolution, 36(3), 536–545.

By: E. Scholl & D. Bird

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2005 journal article

Root-knot nematodes and bacterial Nod factors elicit common signal transduction events in Lotus japonicus

Proceedings of the National Academy of Sciences of the United States of America, 102(8), 3147–3152.

By: R. Weerasinghe, D. Bird & N. Allen

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2004 journal article

A survey of SL1-spliced transcripts from the root-lesion nematode Pratylenchus penetrans

Molecular Genetics and Genomics, 272(2), 138–148.

By: M. Mitreva*, A. Elling*, M. Dante*, A. Kloek*, A. Kalyanaraman*, S. Aluru*, S. Clifton*, D. Bird n, T. Baum*, J. McCarter*

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2004 journal article

Cytokinins play opposite roles in lateral root formation, and nematode and Rhizobial symbioses

Plant Journal, 38(2), 203–214.

By: D. Lohar, J. Schaff n, J. Laskey*, J. Kieber*, K. Bilyeu* & D. Bird n

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2004 journal article

High society (of nematologists)

Genome Biology, 5(11).

By: D. Bird n

Source: ORCID
Added: January 30, 2020

2004 journal article

Signaling between nematodes and plants.

Current Opinion in Plant Biology, 7(4), 372–376.

By: D. Bird

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2003 journal article

Analysis and functional classification of transcripts from the nematode Meloidogyne incognita.

Genome Biology, 4(4), R26–1. http://www.scopus.com/inward/record.url?eid=2-s2.0-9444261296&partnerID=MN8TOARS

By: J. McCarter, M. Mitreva, J. Martin, M. Dante, T. Wylie, U. Rao, D. Pape, Y. Bowers ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2003 journal article

Are roots special? Nematodes have their say

Physiological and Molecular Plant Pathology, 62(2), 115–123.

By: D. Bird n & I. Kaloshian*

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2003 journal article

Horizontally transferred genes in plant-parasitic nematodes: a high-throughput genomic approach.

Genome Biology, 4(6), R39–1. http://www.scopus.com/inward/record.url?eid=2-s2.0-0038576862&partnerID=MN8TOARS

By: E. Scholl, J. Thorne, J. McCarter & D. Bird

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2003 journal article

Interactions between bacteria and plant-parasitic nematodes: Now and then

International Journal for Parasitology, 33(11), 1269–1276.

By: D. Bird n, C. Opperman & K. Davies*

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2003 journal article

Lotus japonicus: A New Model to Study Root-Parasitic Nematodes

Plant and Cell Physiology, 44(11), 1176–1184.

By: D. Lohar & D. Bird n

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2003 journal article

Molecular signals and receptors: Controlling rhizosphere interactions between plants and other organisms

Ecology, 84(4), 858–868.

By: A. Hirsch*, W. Bauer*, D. Bird, J. Cullimore*, B. Tyler* & J. Yoder*

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2003 journal article

Nematode gene sequences: Update for December 2003

Journal of Nematology, 35(4), 465–469. http://www.scopus.com/inward/record.url?eid=2-s2.0-1842510703&partnerID=MN8TOARS

By: J. McCarter, M. Mitreva, S. Clifton, D. Bird & R. Waterston

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2002 journal article

Nematode gene sequences, update for June 2002

Journal of Nematology, 34(2), 71–74. http://www.scopus.com/inward/record.url?eid=2-s2.0-0036618995&partnerID=MN8TOARS

By: J. McCarter, S. Clifton, D. Bird & R. Waterston

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2002 journal article

Recovery and sequence validation of the histological signal following in situ RT-PCR localization of plant gene transcripts

Plant Molecular Biology Reporter, 20(4), 391–397.

By: H. Koltai & D. Bird

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2001 journal article

Cytochrome c is not essential for viability of the fungus Aspergillus nidulans

Molecular Genetics and Genomics, 266(1), 48–55.

By: R. Bradshaw*, D. Bird, S. Brown*, R. Gardiner* & P. Hirst*

Source: ORCID
Added: January 30, 2020

2001 journal article

Overlapping plant signal transduction pathways induced by a parasitic nematode and a rhizobial endosymbiont

Molecular Plant-Microbe Interactions, 14(10), 1168–1177.

By: H. Koltai, M. Dhandaydham, C. Opperman, J. Thomas & D. Bird

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2000 journal article

Alan Francis Bird: 1928-99

Journal of Nematology, 32(1), 1–3.

By: D. Bird

Source: NC State University Libraries
Added: August 6, 2018

2000 journal article

Epistatic repression of PHANTASTICA and class 1 KNOTTED genes is uncoupled in tomato

Plant Journal, 22(5), 455–459.

By: H. Koltai n & D. Bird

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2000 journal article

High throughput cellular localization of specific plant mRNAs by liquid-phase in situ reverse transcription-polymerase chain reaction of tissue sections

Plant Physiology, 123(4), 1203–1212.

By: H. Koltai & D. Bird n

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2000 journal article

Nematode gene sequences, December 2000 update

Journal of Nematology, 32(4), 331–333. http://www.scopus.com/inward/record.url?eid=2-s2.0-0034353966&partnerID=MN8TOARS

By: J. McCarter, D. Bird, S. Clifton & R. Waterston

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2000 journal article

Plant parasitic nematodes: Habitats, hormones, and horizontally-acquired genes

Journal of Plant Growth Regulation, 19(2), 183–194. http://www.scopus.com/inward/record.url?eid=2-s2.0-0033758702&partnerID=MN8TOARS

By: D. Bird & H. Koltai

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2000 journal article

Rapid gene discovery in plant parasitic nematodes via expressed sequence tags

Nematology, 2(7), 719–731.

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

1999 journal article

The Caenorhabditis elegans genome: A guide in the post genomics age

Annual Review of Phytopathology, 37(1999), 247–265.

By: D. Bird n, C. Opperman, S. Jones* & D. Baillie*

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

1998 journal article

Caenorhabditis elegans: A genetic guide to parasitic nematode biology

Journal of Nematology, 30(3), 299–308. http://www.scopus.com/inward/record.url?eid=2-s2.0-0032357095&partnerID=MN8TOARS

By: D. Bird & C. Opperman

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

1998 journal article

The soybean cyst nematode, Heterodera glycines: A genetic model system for the study of plant-parasitic nematodes

Current Opinion in Plant Biology, 1(4), 342–346.

By: C. Opperman & D. Bird

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

1997 journal article

Gene targeting is locus dependent in the filamentous fungus Aspergillus nidulans

Molecular and General Genetics, 255(2), 219–225.

By: D. Bird & R. Bradshaw*

Source: ORCID
Added: January 30, 2020

1997 journal article

Promoter structure of the RNA polymerase II large subunit gene in caenorhabditis elegans and C. Briggsae

Journal of Nematology, 29(2), 144–152. http://www.scopus.com/inward/record.url?eid=2-s2.0-0030786968&partnerID=MN8TOARS

By: D. Bird, I. Kaloshian & S. Molinari

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

1996 journal article

Manipulation of host gene expression by root-knot nematodes

Journal of Parasitology, 82(6), 881–888.

By: D. Bird n

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

1994 journal article

A comprehensive subtractive cDNA cloning approach to identify nematode-induced transcripts in tomato

Phytopathology, 84(3), 299–303.

By: M. Wilson, D. Bird & E. Knaap

Source: ORCID
Added: January 30, 2020

1994 journal article

A genetic nomenclature for parasitic nematodes

Journal of Nematology, 26(2), 138–143. http://www.scopus.com/inward/record.url?eid=2-s2.0-0028054366&partnerID=MN8TOARS

By: D. Bird & D. Riddle

Source: ORCID
Added: January 30, 2020

1994 journal article

DNA sequence and expression analysis of root-knot nematode-elicited giant cell transcripts

Molecular Plant-Microbe Interactions, 7(3), 419–424.

By: D. Bird & M. Wilson

Source: ORCID
Added: January 30, 2020

1993 journal article

Rapid miniprep isolation of mitochondrial DNA from metacestodes, and free- living and parasitic nematodes

Journal of Parasitology, 79(6), 964–967.

By: J. Peloquin*, D. Bird & E. Platzer

Source: ORCID
Added: January 30, 2020

1992 journal article

Efficient removal of hybridization signal from Southern blots probed with radiolabeled oligonucleotides

BioTechniques, 13(1), 34–36. http://www.scopus.com/inward/record.url?eid=2-s2.0-0026653183&partnerID=MN8TOARS

By: I. Kaloshian & D. Bird

Source: ORCID
Added: January 30, 2020

1992 journal article

Sequence comparison of the Caenorhabditis elegans dpy-13 and col-34 genes, and their deduced collagen products

Gene, 120(2), 261–266.

By: D. Bird*

Source: ORCID
Added: January 30, 2020

1989 journal article

Molecular cloning and sequencing of ama-1, the gene encoding the largest subunit of Caenorhabditis elegans RNA polymerase II

Molecular and Cellular Biology, 9(10), 4119–4130.

By: D. Bird & D. Riddle

Source: ORCID
Added: January 30, 2020

1988 journal article

dpy-13: A nematode collagen gene that affects body shape

Cell, 55(4), 567–576.

By: N. Mende*, D. Bird*, P. Albert* & D. Riddle*

Source: ORCID
Added: January 30, 2020

Employment

1995 - present

North Carolina State University Raleigh, NC, US
Named Professor Entomology and Plant Pathology

Education

1980 - 1984

University of Adelaide Adelaide, SA, AU
PhD Biochemistry