Works (80)

Updated: August 7th, 2024 05:01

2024 article

Effective Seed Sterilization Methods Require Optimization Across Maize Genotypes

Parnell, J. J., Pal, G., Awan, A., Vintila, S., Houdinet, G., Hawkes, C. V., … Kleiner, M. (2024, July 17). PHYTOBIOMES JOURNAL, Vol. 7.

By: J. Parnell n, G. Pal n, A. Awan n, S. Vintila n, G. Houdinet n, C. Hawkes n, P. Balint-Kurti n, M. Wagner*, M. Kleiner n

author keywords: germination; gnotobiotic; microbiome; microbiota; plant-microbe interactions; root-associated microbiota; seed microbiome; seed sterilization; seedling contamination; SynCom; synthetic community
Sources: Web Of Science, ORCID, NC State University Libraries
Added: July 22, 2024

2024 article

Priorities, opportunities, and challenges for integrating microorganisms into Earth system models for climate change prediction

Lennon, J. T., Abramoff, R. Z., Allison, S. D., Burckhardt, R. M., DeAngelis, K. M., Dunne, J. P., … Zakem, E. J. (2024, March 25). MBIO.

author keywords: biogeochemistry; modeling; traits; climate change
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
14. Life Below Water (Web of Science)
Source: Web Of Science
Added: April 8, 2024

2024 journal article

The quantification of southern corn leaf blight disease using deep UV fluorescence spectroscopy and autoencoder anomaly detection techniques

PLOS ONE, 19(5).

By: H. Banah n, P. Balint-Kurti n, G. Houdinet n, C. Hawkes n & M. Kudenov n

Sources: Web Of Science, NC State University Libraries
Added: June 17, 2024

2023 journal article

Agrobacterium tumefaciens-mediated transformation of Nigrospora sp. isolated from switchgrass leaves and antagonistic toward plant pathogens

JOURNAL OF MICROBIOLOGICAL METHODS, 215.

By: S. Dutta n, G. Houdinet n, G. NandaKafle n, A. Kafle n, C. Hawkes n & K. Garcia n

author keywords: Agrobacterium tumefaciens; Bipolaris maydis; Endophytic fungi; Fungal transformation; Nigrospora sp.; Parastagonospora nodorum
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries, ORCID
Added: December 18, 2023

2023 article

Fungal Symbionts Generate Water-Saver and Water-Spender Plant Drought Strategies via Diverse Effects on Host Gene Expression

Aimone, C. D., Giauque, H., & Hawkes, C. V. (2023, March 21). PHYTOBIOMES JOURNAL.

By: C. Aimone n, H. Giauque* & C. Hawkes n

author keywords: Ascomycota; microbiome; Panicum hallii; RNA-seq; stress tolerance
TL;DR: The results suggest that fungal effects on plant transcription may identify how they extend the plant phenotype, and the comparison across multiple fungi allows us to differentiate broadly fungal-responsive plant genes vs. those plant genes that respond only to single fungal taxa. (via Semantic Scholar)
UN Sustainable Development Goal Categories
6. Clean Water and Sanitation (OpenAlex)
Source: Web Of Science
Added: August 28, 2023

2023 journal article

Manipulating the plant mycobiome to enhance resilience: Ecological and evolutionary opportunities and challenges

PLOS PATHOGENS, 19(12).

By: C. Hawkes n, X. Allen n, P. Balint-Kurti n & C. Cowger n

Sources: Web Of Science, NC State University Libraries
Added: January 2, 2024

2023 journal article

Plant-soil feedback under drought: does history shape the future?

TRENDS IN ECOLOGY & EVOLUTION, 38(8), 708–718.

By: F. Vries*, J. Lau*, C. Hawkes n & M. Semchenko*

TL;DR: It is hypothesised that plants and microbes with a shared drought history experience more positive PSF under subsequent drought, and future studies need to explicitly include plant-microbial co-occurrence and potential co-adaptation and consider the precipitation history experienced by both plants and microbial. (via Semantic Scholar)
Source: Web Of Science
Added: January 29, 2024

2022 article

Legacies of precipitation influence primary production in Panicum virgatum

Heckman, R. W., Rueda, A., Bonnette, J. E., Aspinwall, M. J., Khasanova, A., Hawkes, C. V., … Fay, P. A. (2022, November 14). OECOLOGIA, Vol. 11.

author keywords: Bud banks; Precipitation variability; Rainfall manipulation; Switchgrass; Tiller dynamics
MeSH headings : Panicum / genetics; Plant Physiological Phenomena; Soil; Droughts; Genotype
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science; OpenAlex)
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: November 28, 2022

2022 article

Microbes, memory and moisture: Predicting microbial moisture responses and their impact on carbon cycling

Evans, S., Allison, S., & Hawkes, C. (2022, March 20). FUNCTIONAL ECOLOGY, Vol. 3.

By: S. Evans*, S. Allison* & C. Hawkes n

author keywords: carbon; drought; legacy; microbial communities; modelling; rainfall; respiration; soil
TL;DR: Soil moisture is a major driver of microbial activity and thus, of the release of carbon into the Earth's atmosphere, and models assume that the response to moisture response functions are a poorly constrained aspect of C models. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science; OpenAlex)
14. Life Below Water (Web of Science)
15. Life on Land (Web of Science)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: March 28, 2022

2022 article

Plant Host Traits Mediated by Foliar Fungal Symbionts and Secondary Metabolites

Sandy, M., Bui, T. I., Aba, K. S., Ruiz, N., Paszalek, J., Connor, E. W., & Hawkes, C. V. (2022, June 17). MICROBIAL ECOLOGY, Vol. 6.

By: M. Sandy*, T. Bui*, K. Aba*, N. Ruiz*, J. Paszalek*, E. Connor*, C. Hawkes n

author keywords: Endophyte; Leaf; Metabolomics; Panicum virgatum; Switchgrass
TL;DR: Examination of commonalities in how 16 fungal endophytes shift plant phenotypic traits such as growth and physiology is examined to inform ongoing efforts to develop metabolites as crop management tools, by identifying how associations with more beneficial components of the microbiome may be affected. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: ORCID, Web Of Science, NC State University Libraries
Added: June 18, 2022

2021 article

Extension of Plant Phenotypes by the Foliar Microbiome

ANNUAL REVIEW OF PLANT BIOLOGY, VOL 72, 2021, Vol. 72, pp. 823–846.

author keywords: phyllosphere; plant-microbe interactions; fungi; bacteria; phages; omics
MeSH headings : Ecology; Microbiota; Phenotype; Plant Development; Plants
TL;DR: This work focuses on the processes that govern the assembly of the foliar microbiome and the potential mechanisms involved in extended plant phenotypes, and highlights knowledge gaps and provides suggestions for new research directions that can propel the field forward. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: July 26, 2021

2021 article

Local Plants, Not Soils, Are the Primary Source of Foliar Fungal Community Assembly in a C4 Grass

Whitaker, B. K., Giauque, H., Timmerman, C., Birk, N., & Hawkes, C. V. (2021, August 18). MICROBIAL ECOLOGY, Vol. 8.

By: B. Whitaker n, H. Giauque*, C. Timmerman*, N. Birk* & C. Hawkes*

author keywords: Source-sink dynamics; Microbiome; Dispersal limitation; Turnover; Nestedness; Precipitation gradient
MeSH headings : Biodiversity; Fungi / physiology; Mycobiome; Panicum; Plants / microbiology; Soil
TL;DR: The results suggest that the source-sink dynamics of foliar fungi are primarily local, that foliar mushrooms spread from plant-to-plant, and that the abiotic environment may affect fungal community sourcing both directly and via changes to host plant communities. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: August 18, 2021

2021 article

Managing Plant Microbiomes for Sustainable Biofuel Production

PHYTOBIOMES JOURNAL, Vol. 5, pp. 3–13.

author keywords: agriculture; metabolomics; metagenomics; microbiome; nutrient cycling; rhizosphere and phyllosphere; soil ecology; yield and crop productivity
TL;DR: The microbiomes associated with bioenergy crops, the effects beneficial microbes have on their hosts, and potential ecosystem impacts of these interactions are considered, and an approach to simultaneously increase crop yields and provide important ecosystem services for a sustainable energy future is addressed. (via Semantic Scholar)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: May 8, 2021

2021 journal article

The future of microbial ecological niche theory and modeling

New Phytologist, 231(2), 508–511.

author keywords: ecological niche modeling; microbiome; mycorrhizal fungi; niche envelope; species distribution modeling
MeSH headings : Ecosystem; Hydrogen-Ion Concentration; Mycorrhizae; Temperature
TL;DR: Light is shed on organismal niches for a whole functional guild of microorganisms, arbuscular mycorrhizal (AM) fungi, for the first time in this issue of NewPhytologist. (via Semantic Scholar)
Source: ORCID
Added: June 16, 2021

2021 journal article

Widespread co-occurrence of Sebacinales and arbuscular mycorrhizal fungi in switchgrass roots and soils has limited dependence on soil carbon or nutrients

PLANTS PEOPLE PLANET, 3(5), 614–626.

By: M. Lee n & C. Hawkes n

author keywords: biofuel crop; co-occurrence; Glomeromycota; grass; Panicum virgatum; Sebacina; Serendipita
TL;DR: Sebacinales are rare compared to arbuscular mycorrhizal fungi, and are only weakly associated with soil carbon, suggesting that ideas about improved soil carbon cycling associated with Sebacinale need to be sufficiently studied across a range of environmental conditions prior to their consideration for broad-spectrum soil inoculants. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
15. Life on Land (Web of Science)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: January 28, 2021

2020 journal article

Drought legacy affects microbial community trait distributions related to moisture along a savannah grassland precipitation gradient

JOURNAL OF ECOLOGY, 109(9), 3195–3210.

author keywords: carbon use efficiency; drought legacy; drying‐ rewetting; microbial growth; resilience; resistance
Sources: Web Of Science, NC State University Libraries
Added: December 11, 2020

2020 journal article

Effects of Plant-Soil Feedback on Switchgrass Productivity Related to Microbial Origin

Agronomy.

By: J. Kiniry*, C. Arthur*, K. Banick*, F. Fritschi*, Y. Wu* & C. Hawkes n

author keywords: Panicum virgatum; bioenergy; perennial crop; geographic variation
Source: ORCID
Added: December 1, 2020

2020 journal article

Historical climate legacies on soil respiration persist despite extreme changes in rainfall

SOIL BIOLOGY & BIOCHEMISTRY, 143.

By: C. Hawkes n, M. Shinada* & S. Kivlin*

author keywords: Drought; Precipitation; Bacteria; Fungi; Grassland
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
14. Life Below Water (Web of Science)
15. Life on Land (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: April 20, 2020

2020 journal article

Plant and Soil Drivers of Whole-Plant Microbiomes: Variation in Switchgrass Fungi from Coastal to Mountain Sites

PHYTOBIOMES JOURNAL, 5(1), 69–79.

By: M. Lee n & C. Hawkes n

author keywords: community assembly; distance-decay; ecology; environmental filtering; fungi; leaf; microbiome; mycology; Panicum virgatum; rhizosphere and phyllosphere; root; soil; spatial scaling
TL;DR: Niche differences at small scales best explained variation in fungal communities and the specific environmental drivers of fungal community composition differed for leaves, roots, and soils, supporting the key role of plant and soil properties. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
14. Life Below Water (OpenAlex)
15. Life on Land (Web of Science)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: December 3, 2020

2020 journal article

Plant biomass, not plant economics traits, determines responses of soil CO2 efflux to precipitation in the C-4 grass Panicum virgatum

JOURNAL OF ECOLOGY, 108(5), 2095–2106.

author keywords: above-ground-below-ground linkages; ecosystem functioning; genotype-by-environment interactions; plant economics spectrum; precipitation variability; switchgrass; trait-based ecology
TL;DR: Estimates of C cycling can be improved by accounting for mediation of precipitation effects on JCO2 by plant economics traits and plant size in resource‐limited environments. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
14. Life Below Water (Web of Science)
15. Life on Land (Web of Science)
Sources: NC State University Libraries, Web Of Science
Added: April 20, 2020

2020 journal article

Soil Water Content and Soil Respiration Rates Are Reduced for Years Following Wildfire in a Hot and Dry Climate

GLOBAL BIOGEOCHEMICAL CYCLES, 34(12).

author keywords: soil respiration; soil moisture; wildfire; forest regeneration; forest disturbance dynamics; global change
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
14. Life Below Water (Web of Science)
15. Life on Land (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: January 25, 2021

2020 journal article

Soil precipitation legacies influence intraspecific plant–soil feedback

Ecology, 101(10).

By: K. Crawford* & C. Hawkes*

author keywords: climate change; genetic diversity; grasslands; Panicum virgatum; pathogens; plant-soil feedback; soil microbial communities
MeSH headings : Droughts; Ecosystem; Feedback; Plants; Soil
TL;DR: Soil precipitation legacies may alter the genotypic composition of P. virgatum populations, favoring genotypes that develop less negative feedback, and may constrain the ability of populations to respond to future changes in climate. (via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water (Web of Science)
15. Life on Land (Web of Science)
Source: ORCID
Added: August 29, 2020

2020 journal article

Spatial and temporal turnover of soil microbial communities is not linked to function in a primary tropical forest

Ecology, 101(4).

By: S. Kivlin* & C. Hawkes*

author keywords: bacteria; balancing turnover; functional redundancy; fungi; gradient turnover; spatiotemporal dynamics
MeSH headings : Ecosystem; Forests; Fungi; Microbiota; Soil; Soil Microbiology
TL;DR: Slow temporal turnover of tropical soil microbial communities and large functional redundancy suggests that shifts in abundance of particular functional groups may more accurately capture ecosystem function than composition in these heterogeneous ecosystems. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
14. Life Below Water (Web of Science)
15. Life on Land (Web of Science; OpenAlex)
Source: ORCID
Added: February 16, 2020

2020 journal article

Symbiosis and stress: how plant microbiomes affect host evolution

Philosophical Transactions of the Royal Society B: Biological Sciences, 375(1808), 20190590.

By: C. Hawkes n, J. Bull* & J. Lau*

author keywords: choice; fidelity; horizontal transmission; incidental benefits; infectious model; quantitative genetics
MeSH headings : Biological Evolution; Genotype; Microbiota; Phenotype; Plant Physiological Phenomena / genetics; Plants / genetics; Plants / microbiology; Stress, Physiological; Symbiosis
TL;DR: It is posited that the microbiome can affect plant microevolution via manipulation of plant phenotypes in ways that increase plant fitness under stress and direct microbial responses to the environment that benefit the plant. (via Semantic Scholar)
Source: ORCID
Added: August 13, 2020

2018 journal article

Ecological mechanisms underlying soil bacterial responses to rainfall along a steep natural precipitation gradient

FEMS Microbiology Ecology.

Christine Hawkes

author keywords: dispersal; drought; generalist; nestedness; reciprocal transplant; spatial turnover; specialist
MeSH headings : Bacteria / classification; Climate Change; Droughts; Ecology; Ecosystem; Microbiota / physiology; Rain; Soil / chemistry; Soil Microbiology; Water / analysis
TL;DR: The high compositional resistance of microbial communities dictated respiration responses to altered rainfall in this system, and a subset of specialist taxa tended to be more abundant in the rainfall environment that matched their original conditions. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2018 journal article

Effects of extreme changes in precipitation on the physiology of C4 grasses

Oecologia, 188(2), 355–365.

By: E. Connor* & C. Hawkes*

author keywords: Climate change; Extreme events; Grasslands; Net ecosystem CO2 exchange (NEE); Evapotranspiration (ET); Ecosystem dark respiration (R-e); Leaf-level photosynthesis (Anet); Stomatal conductance (g(s)); Water use efficiency (WUE)
MeSH headings : Carbon Cycle; Carbon Dioxide; Ecosystem; Photosynthesis; Poaceae
TL;DR: The effects of extreme changes in precipitation on leaf-level and ecosystem CO2 and H2O exchange of three native C4 bunchgrasses over 3 years are examined. (via Semantic Scholar)
UN Sustainable Development Goal Categories
6. Clean Water and Sanitation (OpenAlex)
Source: ORCID
Added: December 19, 2019

2018 journal article

Endophyte traits relevant to stress tolerance, resource use and habitat of origin predict effects on host plants

NEW PHYTOLOGIST, 221(4), 2239–2249.

By: H. Giauque*, E. Connor* & C. Hawkes n

author keywords: Ascomycota; drought; foliar; Panicum virgatum (switchgrass); symbiosis
MeSH headings : Adaptation, Physiological; Ecosystem; Endophytes / physiology; Host-Pathogen Interactions; Phylogeny; Quantitative Trait, Heritable; Soil; Stress, Physiological; Water
TL;DR: Overall, survival was higher for plants grown with more stress-tolerant fungi, and aboveground biomass was enhanced by fungi from warmer and drier habitats, while plant growth and physiology were also dependent on fungal resource use indicators; however, specific predictors were dependent on water availability. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, ORCID, NC State University Libraries
Added: March 4, 2019

2018 journal article

Heterogeneity in arbuscular mycorrhizal fungal communities may contribute to inconsistent plant-soil feedback in a Neotropical forest

Plant and Soil.

Christine Hawkes

author keywords: Context-dependency; Environmental variability; Greenhouse; Spatial; Temporal
TL;DR: Natural AM fungal communities were temporally and spatially heterogeneous and AM fungal communities in the greenhouse did not reflect natural soils, which suggests that applying greenhouse derived plant-soil feedback trends to predict plant coexistence in natural systems may be misleading. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2018 journal article

Tropical Tree Species Effects on Soil pH and Biotic Factors and the Consequences for Macroaggregate Dynamics

Forests.

Christine Hawkes

author keywords: soil structure; soil pH; Oxisol; variable-charge soils; aluminum accumulator
TL;DR: Across all vegetation types, the proportion of smaller macroaggregates declined significantly as soil pH increased, suggesting that alteration of pH influences dispersivity, and thus macroaggregate dynamics, thereby playing a role in soil C, N, and P cycling. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2017 journal article

Brave new world

Biogeochemistry.

Christine Hawkes

Source: ORCID
Added: December 19, 2019

2017 journal article

Historical climate controls soil respiration responses to current soil moisture

Proceedings of the National Academy of Sciences.

By: C. Hawkes*, B. Waring*, J. Rocca* & S. Kivlin*

author keywords: microbial; climate change; precipitation; legacies
MeSH headings : Carbon Cycle; Climate Change / history; Ecosystem; History, 21st Century; Models, Theoretical; Rain; Soil / chemistry; Soil Microbiology; Texas; Water / analysis
TL;DR: It is found that historical rainfall controls both the moisture dependence and sensitivity of respiration, resulting in twofold greater carbon loss on average in historically wetter soils compared with historically drier soils. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (OpenAlex)
Source: ORCID
Added: December 19, 2019

2017 journal article

Legacies in Switchgrass Resistance to and Recovery from Drought Suggest That Good Years Can Sustain Plants Through Bad Years

BioEnergy Research.

Christine Hawkes

author keywords: Bioenergy crop; Panicum virgatum; Precipitation; Resilience
Source: ORCID
Added: December 19, 2019

2017 journal article

Microbial Tools in Agriculture Require an Ecological Context: Stress-Dependent Non-Additive Symbiont Interactions

Agronomy Journal.

Christine Hawkes

UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: ORCID
Added: December 19, 2019

2017 journal article

Regardless of N-substrate, multiple fungal root endophytes isolated from pastures outgrow and outcompete those isolated from undisturbed sites

Pedobiologia.

Christine Hawkes

author keywords: Endophytes; Fungal traits; Competition; FL rosemary scrub; Pasture; Land use; Restoration
TL;DR: Rapid growth and competitive ability appears to be a trait of these fungal endophytes isolated from pastures and not solely a product of high nutrients, which may inhibit successful reintroduction of fungi from undisturbed sites. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2017 journal article

Soil carbon cycling proxies: Understanding their critical role in predicting climate change feedbacks

Global Change Biology.

Christine Hawkes

author keywords: clay; CUE; models; soil carbon; soil organic matter
MeSH headings : Carbon / chemistry; Carbon / metabolism; Carbon Cycle; Climate Change; Models, Theoretical; Soil / chemistry; Soil Microbiology
TL;DR: Examining some broad assumptions in soil C cycling with the proxies already in use can develop new hypotheses and specify criteria for new and needed proxies, and considers how emerging data types can serve as proxies for microbial community activities. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (OpenAlex)
Source: ORCID
Added: December 19, 2019

2017 chapter

The Predictive Power of Ecological Niche Modeling for Global Arbuscular Mycorrhizal Fungal Biogeography

In Biogeography of Mycorrhizal Symbiosis.

Christine Hawkes

TL;DR: This first attempt to model AM fungal distributions with ecological niche models for the widespread AMfungal taxon Rhizophagus irregularis shows that despite varying the definition of the operational taxonomic unit (OTU) for R. irregularis, the predicted distributions are consistently affected by a positive association with soil moisture. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2017 journal article

Translating Phytobiomes from Theory to Practice: Ecological and Evolutionary Considerations

Phytobiomes Journal, 1(2), 57–69.

By: C. Hawkes* & E. Connor*

author keywords: agriculture; ecology
TL;DR: This work proposes that development and optimization of microbiome treatments will benefit from the integration of ecological and evolutionary niche theory into plant microbiome studies, and reviews several niche-based processes that can aid in the development and implementation of microbiome Treatments. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2016 chapter

Climate Change, Microbes, and Soil Carbon Cycling

In Climate Change and Microbial Ecology: Current Research and Future Trends.

Christine Hawkes

UN Sustainable Development Goal Categories
13. Climate Action (OpenAlex)
Source: ORCID
Added: December 19, 2019

2016 journal article

Ectomycorrhizal fungi slow soil carbon cycling

Ecology Letters.

Christine Hawkes

author keywords: Biogeochemistry; ecosystem ecology; mycorrhizal fungi; soil carbon; soil ecology; soil nitrogen
MeSH headings : Biomass; Carbon / chemistry; Carbon Cycle / physiology; Enzymes / metabolism; Forests; Fungi / metabolism; Mycorrhizae; Soil / chemistry; Tsuga / microbiology
TL;DR: It is shown that ectomycorrhizal roots and hyphae decrease soil carbon respiration rates by up to 67% under field conditions in two separate field exclusion experiments, which likely occurs via competition for soil nitrogen, an effect larger than 2 °C soil warming. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2016 journal article

Historical and current climate drive spatial and temporal patterns in fungal endophyte diversity

Fungal Ecology.

Christine Hawkes

author keywords: Ascomycota; Environmental filtering; Rainfall; Species sorting; Temperature; Warm-season grass
TL;DR: The importance of historical climate and annual weather in endophyte distributions suggests that species sort by environment and are likely to be affected by future climate change. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (OpenAlex)
Source: ORCID
Added: December 19, 2019

2016 journal article

Historical precipitation predictably alters the shape and magnitude of microbial functional response to soil moisture

Global Change Biology.

Christine Hawkes

author keywords: climate change; historical contingency; microbes; precipitation; soil enzymes; soil moisture
MeSH headings : Carbon / analysis; Climate; Rain; Seasons; Soil / chemistry; Soil Microbiology; Texas
TL;DR: It is suggested that variation in the shape and magnitude of soil microbial response to soil moisture due to historical climate may be remarkably predictable at regional scales, and this approach may extend to other systems. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (OpenAlex)
Source: ORCID
Added: December 19, 2019

2016 journal article

Intraspecific variation in precipitation responses of a widespread C4grass depends on site water limitation

Journal of Plant Ecology.

Christine Hawkes

author keywords: climate change; Panicum virgatum; phenology; phenotypic plasticity; precipitation
TL;DR: Variation in genotype ANPP plasticity was explained primarily by variation in tiller and leaf growth, and was not associated with temperature or aridity at the genotype’s origin. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2016 journal article

Promises and challenges of eco-physiological genomics in the field: tests of drought responses in switchgrass

Plant Physiology.

Christine Hawkes

MeSH headings : Adaptation, Physiological / genetics; Droughts; Ecosystem; Gene Expression Profiling / methods; Gene Expression Regulation, Plant; Genomics / methods; Panicum / genetics; Photosynthesis / genetics; Plant Leaves / genetics; Principal Component Analysis; Soil / chemistry; Stress, Physiological; Water / metabolism
TL;DR: The strong across-experiment correlations between physiological plasticity—but not differential gene expression—highlight the complex and diverse genetic mechanisms that can produce phenotypically similar responses to various soil water deficits. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2016 journal article

Simulating diverse native C4 perennial grasses with varying rainfall

Journal of Arid Environments.

Christine Hawkes

author keywords: Forage; Rainfall; ALMANAC; Plant growth; Perennial grass
Source: ORCID
Added: December 19, 2019

2016 journal article

Temporal and Spatial Variation of Soil Bacteria Richness, Composition, and Function in a Neotropical Rainforest

PLOS ONE.

Christine Hawkes

MeSH headings : Bacteria / classification; Bacteria / genetics; Biodiversity; Forests; Phylogeny; Rainforest; Soil Microbiology
TL;DR: Understanding of tropical soil bacteria will benefit from additional work to determine the optimal temporal and spatial scales for sampling, as it will facilitate prediction of how tropical soil microbes will respond to future environmental change. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2016 journal article

Tree species, spatial heterogeneity, and seasonality drive soil fungal abundance, richness, and composition in Neotropical rainforests

Environmental Microbiology.

Christine Hawkes

MeSH headings : Ecosystem; Fungi; Rainforest; Seasons; Soil / chemistry; Soil Microbiology; Trees / microbiology; Trees / physiology; Tropical Climate
TL;DR: The combined effects of tree species and seasonality suggest that predicted losses of tropical tree diversity and intensification of drought have the potential to cascade belowground to affect both diversity and abundance of tropical soil fungi. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2015 journal article

Microbial-mediated redistribution of ecosystem nitrogen cycling can delay progressive nitrogen limitation

Biogeochemistry.

Christine Hawkes

author keywords: Nitrogen; Microbes; Mycorrhizal fungi; Progressive nitrogen limitation; Ecosystems
TL;DR: It is suggested that microbe-mediated changes in N partitioning can delay PNL and may thereby act as a mechanism to extend the duration of the land carbon sink in response to rising atmospheric CO2. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2015 journal article

Plant and root endophyte assembly history: interactive effects on native and exotic plants

Ecology.

Christine Hawkes

author keywords: assembly history; Florida rosemary scrub; fungal root endophytes; invasion; priority effects; restoration
MeSH headings : Endophytes; Fungi / classification; Fungi / physiology; Introduced Species; Plant Roots / microbiology; Plants / classification; Plants / microbiology; Species Specificity; Time Factors
TL;DR: Early introduction of a different plant species or fungi from a different site type eliminated negative effects of the exotic Melinis repens and the native Schizacharyium niveum, providing evidence for interactive priority effects. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2015 journal article

Resilience vs. historical contingency in microbial responses to environmental change

Ecology Letters.

Christine Hawkes

author keywords: Acclimation; acclimatisation; adaptation; climate change; competition; dormancy; ecosystem function; legacy; microbial community; plasticity
MeSH headings : Biological Evolution; Climate Change; Ecology / methods; Ecosystem; Models, Theoretical; Soil / chemistry; Soil Microbiology
TL;DR: By modelling microbial population responses to environmental change, it is demonstrated that historical environments can constrain soil function with the degree of constraint depending on the magnitude of change in the context of the prior environment. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2014 journal article

Environmental Controls on Fungal Community Composition and Abundance Over 3 Years in Native and Degraded Shrublands

Microb Ecol, 68(4), 807–817.

By: C. Glinka* & C. Hawkes*

MeSH headings : Biodiversity; Environment; Florida; Fungal Proteins / genetics; Fungi / genetics; Fungi / physiology; Molecular Sequence Data; Plants / microbiology; Polymorphism, Restriction Fragment Length; Sequence Analysis, DNA; Soil / chemistry; Soil Microbiology
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2014 journal article

Resilience in ecology: Abstraction, distraction, or where the action is?

Biological Conservation, 177, 43–51.

author keywords: Biodiversity conservation; Ecological resilience; Environmental policy; Recovery; Restoration goals; Threshold
TL;DR: It is argued that thresholds of disturbance are central to measuring resilience and linking thresholds to functional diversity indices may improve the ability to predict the resilience of ecosystems to future, potentially novel, disturbances according to their spatial and temporal scales of influence. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2014 journal article

Short-Term Precipitation Exclusion Alters Microbial Responses to Soil Moisture in a Wet Tropical Forest

Microbial Ecology, 69(4), 843–854.

By: B. Waring* & C. Hawkes*

MeSH headings : Biota; Costa Rica; Rain; Rainforest; Soil / chemistry; Soil Microbiology
TL;DR: Functional patterns suggest that changes in microbial physiology may drive positive feedbacks to rising atmospheric CO2 concentrations if wet tropical forests experience longer or more intense dry seasons in the future. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2013 journal article

Biotic plant-soil feedbacks across temporal scales

J Ecol, 101(2), 309–315.

Ed(s): W. Putten

author keywords: competition; disturbance; life history; mycorrhizas; plant traits; population and community dynamics; primary and secondary succession; soil legacy
TL;DR: This work synthesizes current knowledge on temporal aspects of plant–soil feedbacks and presents new ideas to better understand and predict the effects of plant-soil Feedback on community and ecosystem properties across temporal scales. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2013 journal article

Climate affects symbiotic fungal endophyte diversity and performance

American Journal of Botany.

Christine Hawkes

author keywords: drought; Panicum; perennial C-4 grass; precipitation gradient
TL;DR: There was substantial variability in how individual endophytic taxa affected plant traits under high and low water availability, with up to two orders of magnitude difference in the plasticity of plant traits conferred by the different fungal taxa. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2013 journal article

Differences in fungal and bacterial physiology alter soil carbon and nitrogen cycling: insights from meta-analysis and theoretical models

Ecol Lett, 16(7), 887–894.

By: B. Waring*, C. Averill* & C. Hawkes*

Ed(s): M. Holyoak

author keywords: Bacteria; biogeochemical model; enzymes; fungi; N mineralisation; overyielding; soil
MeSH headings : Bacterial Physiological Phenomena; Carbon / analysis; Fungi / physiology; Models, Theoretical; Nitrogen / analysis; Soil / chemistry
TL;DR: It is concluded that differences in bacterial and fungal physiology may have large consequences for ecosystem-scale C and N cycling. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2013 journal article

Genotypic variation in traits linked to climate and aboveground productivity in a widespread C 4 grass: evidence for a functional trait syndrome

New Phytol, 199(4), 966–980.

author keywords: C-4; climate change; evolution; genecology; Panicum virgatum (switchgrass); physiology; polyploidy
MeSH headings : Analysis of Variance; Carbon / metabolism; Climate; Genetic Variation; Genotype; Geography; Inheritance Patterns / genetics; Panicum / anatomy & histology; Panicum / genetics; Panicum / growth & development; Plant Leaves / anatomy & histology; Plant Leaves / genetics; Plant Leaves / growth & development; Ploidies; Principal Component Analysis; Quantitative Trait, Heritable; Seasons
TL;DR: The results provide new insight into the role of climate in driving functional trait coordination, local adaptation and genetic divergence within species, and emphasize the importance of considering intraspecific variation in future climate change scenarios. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (OpenAlex)
Source: ORCID
Added: December 19, 2019

2013 journal article

Tradeoffs in microbial carbon allocation may mediate soil carbon storage in future climates

Front. Microbiol., 4.

author keywords: carbon allocation; extracellular enzyme activity; climate change; microbial physiology; biomass stoichiometry
TL;DR: Soil microbes may differentially allocate C in changing environments by altering processes such as enzyme production, C use efficiency (CUE), or biomass stoichiometry, but because these mechanisms may operate simultaneously and interact, microbial physiological feedbacks on soil C storage are difficult to predict. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (OpenAlex)
Source: ORCID
Added: December 19, 2019

2012 journal article

Biogeochemical and Microbial Legacies of Non-Native Grasses Can Affect Restoration Success

Restoration Ecology, 21(1), 58–66.

By: S. Hamman* & C. Hawkes*

author keywords: algae; biological soil crusts; disturbance; exotic; Florida scrub; fungi; Melinis repens; nitrogen; Paspalum notatum; pasture
TL;DR: The results support the need for context‐dependent restoration approaches and suggest that the degree of soil legacy effects may be a good indicator of restoration potential. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2012 journal article

Perennial Biomass Grasses and the Mason–Dixon Line: Comparative Productivity across Latitudes in the Southern Great Plains

BioEnergy Research.

Christine Hawkes

author keywords: Biofuel grasses; Switchgrass; Miscanthus; Simulation modeling
Source: ORCID
Added: December 19, 2019

2012 journal article

The temporal development and additivity of plant-soil feedback in perennial grasses

Plant Soil, 369(1-2), 141–150.

By: C. Hawkes*, S. Kivlin*, J. Du* & V. Eviner*

author keywords: Bothriochloa; Exotic; Native; Panicum; Plant-soil feedback; Temporal variation
TL;DR: Temporal variation and non-additivity in feedback suggest that extrapolation to communities may be complex and more work is needed to assess the generality of temporal and scaling effects. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2011 journal article

Evolutionary trade-offs among decomposers determine responses to nitrogen enrichment

Ecology Letters, 14(9), 933–938.

By: K. Treseder*, S. Kivlin & C. Hawkes*

author keywords: Database synthesis; labile organic carbon; Micrococcineae; nitrogen; phylogenetic independent contrasts; Pseudomonas; recalcitrant organic carbon
MeSH headings : Bacteria / metabolism; Biological Evolution; Carbon / metabolism; Ecosystem; Nitrates / metabolism; Nitrogen / metabolism; Seawater / chemistry; Seawater / microbiology; Soil / chemistry; Soil Microbiology
TL;DR: It is found that taxa that used more recalcitrant carbon compounds were more prevalent in ocean waters with higher nitrate concentrations, and labile carbon users targeted more organic N compounds, and were more common in higher latitude soils, which is consistent with the paradigm that N-limitation is stronger at higher latitudes. (via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Source: ORCID
Added: December 19, 2019

2011 journal article

Global diversity and distribution of arbuscular mycorrhizal fungi

Soil Biology and Biochemistry, 43(11), 2294–2303.

By: S. Kivlin*, C. Hawkes* & K. Treseder*

author keywords: Arbuscular mycorrhizal fungi; Biogeography; Diversity; Dispersal limitation; Environmental filtering; Biotic interactions
TL;DR: The results indicated that the global species richness of AM fungi was up to six times higher than previously estimated, largely owing to high beta diversity among sampling sites and habitat filtering or dispersal limitation is a driver of AM fungal community assembly. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2010 journal article

Differentiating between effects of invasion and diversity: impacts of aboveground plant communities on belowground fungal communities

New Phytologist, 189(2), 526–535.

By: S. Kivlin* & C. Hawkes*

author keywords: arbuscular mycorrhizal fungi; congener; diversity; exotic; native; perennial grass; saprophytic fungi
MeSH headings : Biodiversity; Biomass; Colony Count, Microbial; Fungi / isolation & purification; Fungi / physiology; Introduced Species; Plant Development; Plants / microbiology; Soil Microbiology
TL;DR: This work examined how fungi colonizing plant roots were affected by plant richness replicated across a range of plant community mixtures (natives, exotics, native-exotic mixtures) to understand both the controllers of belowground resilience and mechanisms of successful colonization and spread of exotic plants. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2010 journal article

Ecosystem Impacts of Exotic Plants Can Feed Back to Increase Invasion in Western US Rangelands

Rangelands, 32(1), 21–31.

By: V. Eviner*, S. Hoskinson* & C. Hawkes*

Source: ORCID
Added: December 19, 2019

2010 journal article

Fungal community responses to precipitation

Global Change Biology, 17(4), 1637–1645.

By: C. Hawkes*, S. Kivlin*, J. Rocca*, V. Huguet*, M. Thomsen* & K. Suttle*

author keywords: climate change; fungi; grassland; northern California; rainfall; seasonality
Source: ORCID
Added: December 19, 2019

2010 journal article

Order of plant host establishment alters the composition of arbuscular mycorrhizal communities

Ecology, 91(8), 2333–2343.

By: N. Hausmann* & C. Hawkes*

author keywords: arbuscular mycorrhizal fungi (AMF); Avena barbata; Bromus hordeaceus; community assembly; grassland; Nassella pulchra; phenology; priority effects; T-RFLP; Vulpia microstachys
MeSH headings : Biomass; Ecosystem; Mycorrhizae / physiology; Plant Roots / microbiology; Plants / classification; Population Dynamics; Soil Microbiology; Symbiosis
TL;DR: It is hypothesized that plant establishment order can affect the community of arbuscular mycorrhizal fungi (AMF) in roots, with the strength of this effect dependent on both host plant identity and neighboring plant identity. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2009 journal article

Origin, local experience, and the impact of biotic interactions on native and introduced Senecio species

Biol Invasions, 12(1), 113–124.

By: C. Hawkes*, A. Douglas* & A. Fitter*

author keywords: Enemy release; Mutualist facilitation; Herbivory; Invasion; Pathogens
TL;DR: Findings support the enemy release hypothesis and indicate the potential for changes in enemy release as time and experience in the new range increase. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2009 journal article

Plant neighborhood control of arbuscular mycorrhizal community composition

New Phytologist, 183(4), 1188–1200.

By: N. Hausmann* & C. Hawkes*

author keywords: arbuscular mycorrhizal fungi (AMF); Avena barbata; Bromus hordeaceus; grassland; Nassella pulchra; neighborhood; plant community; Vulpia microstachys
MeSH headings : Cloning, Organism; Ecosystem; Fungi / genetics; Mycorrhizae / genetics; Plant Roots / genetics; Poaceae; Polymorphism, Restriction Fragment Length; Symbiosis
TL;DR: The findings support a community approach to AMF studies, which can be used to increase the understanding of processes such as invasion and succession. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2009 journal article

Why do we fly? Ecologists' sins of emission

Frontiers in Ecology and the Environment, 7(6), 294–296.

Source: ORCID
Added: December 19, 2019

2008 journal article

Embracing Variability in the Application of Plant-Soil Interactions to the Restoration of Communities and Ecosystems

Restoration Ecology, 16(4), 713–729.

By: V. Eviner* & C. Hawkes*

author keywords: context dependence; microbial communities; plant-soil interactions; plant traits; restoration; soil nutrients; species effects
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2008 journal article

Preserving Accuracy in GenBank

Science.

Christine Hawkes

MeSH headings : Databases, Nucleic Acid / standards; Fungi / classification; Fungi / genetics; National Library of Medicine (U.S.); United States
Source: ORCID
Added: December 19, 2019

2007 journal article

Are Invaders Moving Targets? The Generality and Persistence of Advantages in Size, Reproduction, and Enemy Release in Invasive Plant Species with Time since Introduction

Am Nat, 170(6), 832–843.

By: C. Hawkes*

author keywords: exotic plants; invasion; congeneric pairs; home versus away; time since introduction; geographic distribution
MeSH headings : Adaptation, Physiological; Animals; Biological Evolution; Conservation of Natural Resources; Ecosystem; Feeding Behavior / physiology; Insecta / physiology; Models, Biological; Plants / anatomy & histology; Population Dynamics; Reproduction; Time Factors
TL;DR: Time since introduction was a significant nonlinear predictor of enemy release for both herbivores and pathogens, with initial release in recently arrived species and little to no release after 50 to 200 years. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2007 article

Root Interactions with Soil Microbial Communities and Processes

The Rhizosphere, pp. 1–29.

By: C. Hawkes*, K. DeAngelis & M. Firestone

TL;DR: Understanding and quantifying the interactions among plants and soil microbes is essential for understanding both plant and soil microbial community ecology and the roles that these communities play in ecosystem function. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2007 journal article

Soil temperature affects carbon allocation within arbuscular mycorrhizal networks and carbon transport from plant to fungus

Global Change Biol, 14(5), 1181–1190.

By: C. Hawkes*, I. Hartley*, P. Ineson* & A. Fitter*

author keywords: C-13 pulse label; carbon cycle; climate change; extraradical mycelia; Plantago lanceolata; root length colonization; soil respiration
TL;DR: Temperature significantly altered the structure and allocation of the AM hyphal network, with a switch from more vesicles in cooled soils to more extensive extraradical hyphal networks (growth) in warmed soils and an increase in the amount of carbon respired per unit hyphal length. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2006 journal article

Arbuscular Mycorrhizal Assemblages in Native Plant Roots Change in the Presence of Invasive Exotic Grasses

Plant Soil, 281(1-2), 369–380.

author keywords: arbuscular mycorrhizal fungi; exotic annual grasses; grasslands; native perennial grasses; plant invasion
TL;DR: Alteration of the soil microbial community by plant invasion can provide a mechanism for both successful invasion and the resulting effects of invaders on the ecosystem. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2005 journal article

Plant invasion alters nitrogen cycling by modifying the soil nitrifying community

Ecol Letters, 8(9), 976–985.

By: C. Hawkes*, I. Wren*, D. Herman* & M. Firestone*

author keywords: ammonia-oxidizing bacteria; annual grass invasion; Avena barbata; Bromus hordeaceus; gross mineralization; gross nitrification; Lupinus bicolor; Nassella pulchra
TL;DR: It is hypothesized that belowground changes to the soil microbial community provide a mechanistic link between exotic plant invasion and changes to ecosystem nutrient cycling. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

2004 journal article

Effects of biological soil crusts on seed germination of four endangered herbs in a xeric Florida shrubland during drought

Plant Ecology, 170(1), 121–134.

By: C. Hawkes*

author keywords: cryptogamic; disturbance; microbiotic; precipitation; rosemary scrub
TL;DR: Overall rates of germination were generally very low during this study, possibly as a result of seasonal droughts that could have reduced germination, increased seed dormancy, and/or decreased seed viability. (via Semantic Scholar)
Source: ORCID
Added: December 19, 2019

2001 journal article

The Impact of Herbivory on Plants in Different Resource Conditions: A Meta-Analysis

Ecology, 82(7), 2045.

By: C. Hawkes* & J. Sullivan*

author keywords: compensation; continuum of responses model; defoliation; effect size; growth rate model; herbivory; log response ratio; meta analysis; plant growth and reproduction; plant-herbivore interactions; overcompensation; resources
Source: ORCID
Added: December 19, 2019

1996 journal article

The Relationship between Open Space and Fire for Species in a Xeric Florida Shrubland

Bulletin of the Torrey Botanical Club, 123(2), 81.

By: C. Hawkes* & E. Menges*

author keywords: endemic; Florida; gaps; open space; rosemary; scrub; shrubland; time since fire
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

1995 journal article

Density and Seed Production of a Florida Endemic, Polygonella basiramia, in Relation to Time since Fire and Open Sand

American Midland Naturalist, 133(1), 138.

By: C. Hawkes* & E. Menges*

TL;DR: The amount of open sand habitat at a site is identified as the only variable having a significant positive relationship with both plant density and seed production, suggesting that the lack of interspecific competition in open sand gaps helps define P basiramia microhabitat. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: ORCID
Added: December 19, 2019

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