Works (26)

2021 journal article

Genome-wide association study and gene network analyses reveal potential candidate genes for high night temperature tolerance in rice

SCIENTIFIC REPORTS, 11(1).

By: R. Bheemanahalli, M. Knight, C. Quinones, C. Doherty & S. Jagadish

Sources: ORCID, Web Of Science
Added: March 25, 2021

2021 journal article

Quantification of gray mold infection in lettuce using a bispectral imaging system under laboratory conditions

PLANT DIRECT, 5(3).

By: C. Scarboro, S. Ruzsa, C. Doherty & M. Kudenov

Sources: ORCID, Web Of Science
Added: March 25, 2021

2021 journal article

Warm nights disrupt transcriptome rhythms in field-grown rice panicles

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 6.

By: J. Desai, L. Lawas, A. Valente, A. Leman, D. Grinevich, S. Jagadish, C. Doherty

Sources: ORCID, Web Of Science
Added: June 22, 2021

2020 journal article

A universal method for high-quality RNA extraction from plant tissues rich in starch, proteins and fiber

SCIENTIFIC REPORTS, 10(1).

By: A. Vennapusa, I. Somayanda, C. Doherty & S. Jagadish

Sources: ORCID, Web Of Science
Added: January 25, 2021

2020 article

Detection of Gray Mold Infection in Plants Using a Multispectral Imaging System

Scarboro, C. G., Ruzsa, S. M., Doherty, C. J., & Kudenov, M. W. (2020, April 25). (Vol. 4). Vol. 4.

By: C. Scarboro, S. Ruzsa, C. Doherty & M. Kudenov

Source: ORCID
Added: April 26, 2020

2019 journal article

Analysis of differential gene expression and alternative splicing is significantly influenced by choice of reference genome

RNA, 25(6), 669–684.

By: E. Slabaugh, J. Desai, R. Sartor, L. Lawas, S. Krishna Jagadish & C. Doherty

Sources: Web Of Science, ORCID
Added: June 4, 2019

2019 journal article

Arabidopsis bioinformatics resources: The current state, challenges, and priorities for the future

PLANT DIRECT, 3(1).

By: C. Doherty, J. Friesner, B. Gregory, A. Loraine, M. Megraw, B. Meyers, N. Provart, R. Slotkin ...

Sources: Web Of Science, ORCID
Added: February 17, 2020

2019 journal article

Directions for research and training in plant omics: Big Questions and Big Data

Plant Direct, 3(4).

By: C. Argueso, S. Assmann, K. Birnbaum, S. Chen, J. Dinneny, C. Doherty, A. Eveland, J. Friesner ...

Source: ORCID
Added: June 25, 2019

2019 journal article

New candidate loci and marker genes on chromosome 7 for improved chilling tolerance in sorghum

J. Exp. Bot, 4.

By: N. Moghimi, J. Desai, R. Bheemanahalli, S. Impa, A. Vennapusa, D. Sebela, R. Perumal, C. Doherty, S. Jagadish

Source: ORCID
Added: June 25, 2019

2019 journal article

Novel transcriptional responses to heat revealed by turning up the heat at night

Plant Molecular Biology, 101(1-2), 1–19.

By: D. Grinevich, J. Desai, K. Stroup, J. Duan, E. Slabaugh & C. Doherty

Source: ORCID
Added: June 25, 2019

2019 journal article

Only a matter of time: the impact of daily and seasonal rhythms on phytochemicals

Phytochemistry Reviews, 18(6), 1409–1433.

By: D. Liebelt, J. Jordan & C. Doherty

Source: ORCID
Added: August 15, 2019

2019 article

Warm nights disrupt global transcriptional rhythms in field-grown rice panicles

Desai, J. S., Lawas, L. M. F., Valente, A. M., Leman, A. R., Grinevich, D. O., Jagadish, S. V. K., & Doherty, C. J. (2019, July 16). (Vol. 7). Vol. 7.

By: J. Desai, L. Lawas, A. Valente, A. Leman, D. Grinevich, S. Jagadish, C. Doherty

Source: ORCID
Added: July 17, 2019

2018 journal article

Neural Net Classification Combined With Movement Analysis to Evaluate Setaria viridis as a Model System for Time of Day of Anther Appearance

Frontiers in Plant Science, 9.

By: J. Desai, E. Slabaugh, D. Liebelt, J. Fredenberg, B. Gray, S. Jagadish, O. Wilkins, . doherty

Sources: NC State University Libraries, ORCID
Added: November 12, 2018

2017 journal article

Improving Gene Regulatory Network Inference by Incorporating Rates of Transcriptional Changes

Scientific Reports.

By: J. Desai, R. Sartor, L. Lawas, S. Jagadish & C. Doherty

Source: ORCID
Added: June 25, 2019

2017 journal article

Plant stress tolerance requires auxin-sensitive Aux/IAA transcriptional repressors

Current Biology, 27(3), 437–444.

By: E. Shani, M. Salehin, Y. Zhang, S. Sanchez, . doherty, R. Wang, C. Mangado, L. Song ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2017 journal article

The Next Generation of Training for Arabidopsis Researchers: Bioinformatics and Quantitative Biology

Plant Physiol., 175(4), 1499–1509.

By: J. Friesner, S. Assmann, R. Bastow, J. Bailey-Serres, J. Beynon, V. Brendel, C. Buell, A. Bucksch ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2016 article

Improving Gene Regulatory Network Inference by Incorporating Rates of Transcriptional Changes

Desai, J. S., Sartor, R. C., Lawas, L. M., Jagadish, S. V. K., & Doherty, C. J. (2016, December 24). (Vol. 12). Vol. 12.

By: J. Desai, R. Sartor, L. Lawas, S. Jagadish & C. Doherty

Source: ORCID
Added: June 25, 2019

2015 journal article

Genome-wide identification of CCA1 targets uncovers an expanded clock network in Arabidopsis.

Proceedings of the National Academy of Sciences of the United States of America.

Source: ORCID
Added: January 25, 2021

2015 journal article

Regulation of the Arabidopsis CBF regulon by a complex low-temperature regulatory network.

The Plant Journal : for Cell and Molecular Biology.

Source: ORCID
Added: January 25, 2021

2014 journal article

A genome-scale resource for the functional characterization of Arabidopsis transcription factors.

Cell Reports.

Source: ORCID
Added: June 25, 2019

2012 journal article

Arabidopsis circadian clock protein, TOC1, is a DNA-binding transcription factor.

Proceedings of the National Academy of Sciences of the United States of America.

Source: ORCID
Added: June 25, 2019

2012 journal article

CIRCADIAN CLOCK-ASSOCIATED 1 regulates ROS homeostasis and oxidative stress responses.

Proceedings of the National Academy of Sciences of the United States of America.

Source: ORCID
Added: January 25, 2021

2012 journal article

Circadian surprise--it's not all about transcription.

Science (New York, N.Y.).

Source: ORCID
Added: January 25, 2021

2011 journal article

A comparison of the low temperature transcriptomes and CBF regulons of three plant species that differ in freezing tolerance: Solanum commersonii, Solanum tuberosum, and Arabidopsis thaliana.

Journal of Experimental Botany.

Source: ORCID
Added: January 25, 2021

2010 journal article

Circadian control of global gene expression patterns.

Annual Review of Genetics.

Source: ORCID
Added: January 25, 2021

2009 journal article

Roles for Arabidopsis CAMTA transcription factors in cold-regulated gene expression and freezing tolerance.

The Plant Cell.

Source: ORCID
Added: January 25, 2021

Employment

2014 - present

North Carolina State University Raleigh, NC, US
Associate Professor Molecular and Structural Biochemistry

2008 - 2013

University of California San Diego La Jolla, CA, US
Postdoctoral Researcher

Education

2002 - 2008

Michigan State University East Lansing, MI, US
PhD Biochemistry and Molecular Biology