2024 journal article
Analysis of within-pen and between-pen fenceline temporal contact networks in confined feedlot cattle
PREVENTIVE VETERINARY MEDICINE, 227.
2024 journal article
Geographic disparities and predictors of COVID-19 vaccination in Missouri: a retrospective ecological study
FRONTIERS IN PUBLIC HEALTH, 12.
2024 journal article
Modeling county level COVID-19 transmission in the greater St. Louis area: Challenges of uncertainty and identifiability when fitting mechanistic models to time-varying processes
MATHEMATICAL BIOSCIENCES, 371.
2024 journal article
Quantifying trade-offs between therapeutic efficacy and resistance dissemination for enrofloxacin dose regimens in cattle
SCIENTIFIC REPORTS, 14(1).
2023 article
Distilling Mechanistic Models From Multi-Omics Data
Erwin, S., Fletcher, J. R., Sweeney, D. C., Theriot, C. M., & Lanzas, C. (2023, September 6).
2023 article
Early coronavirus disease 2019 (COVID-19) pandemic effects on individual-level risk for healthcare-associated infections in hospitalized patients
Farthing, T. S., Jolley, A., Nickel, K. B., Hill, C., Stwalley, D., Reske, K. A., … Lanzas, C. (2023, June 29). INFECTION CONTROL AND HOSPITAL EPIDEMIOLOGY, Vol. 6.
2023 journal article
Early evaluation of the Food and Drug Administration (FDA) guidance on antimicrobial use in food animals on antimicrobial resistance trends reported by the National Antimicrobial Resistance Monitoring System (2012-2019)
ONE HEALTH, 17.
2023 journal article
Extensions of mean-field approximations for environmentally-transmitted pathogen networks
MATHEMATICAL BIOSCIENCES AND ENGINEERING, 20(2), 1637–1673.
2023 journal article
Impacts of the <scp>COVID</scp>‐19 pandemic on antimicrobial use in companion animals in an academic veterinary hospital in North Carolina
Zoonoses and Public Health, 70(5), 393–402.
2023 journal article
Modeling impact of vaccination on COVID-19 dynamics in St. Louis
JOURNAL OF BIOLOGICAL DYNAMICS, 17(1).
2022 review
A review of epidemiological models of Clostridioides difficile transmission and control (2009e2021)
[Review of ]. ANAEROBE, 74.
2022 article
Epidemiology of Plasmid Lineages Mediating the Spread of Extended-Spectrum Beta-Lactamases among Clinical Escherichia coli
Mahmud, B., Wallace, M. A., Reske, K. A., Alvarado, K., Muenks, C. E., Rasmussen, D. A., … Dantas, G. (2022, August 22). (C. W. Marshall, Ed.). MSYSTEMS, Vol. 8.
Ed(s): C. Marshall
2022 journal article
Geographic disparities and determinants of COVID-19 incidence risk in the greater St. Louis Area, Missouri (United States)
PLOS ONE, 17(9).
2022 journal article
Geographic disparities and predictors of COVID-19 hospitalization risks in the St. Louis Area, Missouri (USA)
BMC PUBLIC HEALTH, 22(1).
2022 journal article
Identifying patient-level risk factors associated with non-beta-lactam resistance outcomes in invasive MRSA infections in the United States using chain graphs
JAC-ANTIMICROBIAL RESISTANCE, 4(4).
2021 journal article
Assessing the efficacy of interventions to control indoor SARS-Cov-2 transmission: An agent-based modeling approach
EPIDEMICS, 37.
2021 article
Assessing the efficacy of interventions to control indoor SARS-Cov-2 transmission: an agent-based modeling approach
Farthing, T. S., & Lanzas, C. (2021, January 22). (Vol. 1). Vol. 1.
2021 journal article
Combining epidemiological and ecological methods to quantify social effects on Escherichia coli transmission
ROYAL SOCIETY OPEN SCIENCE, 8(10).
2021 article
Identifying patient-level risk factors associated with non-β-lactam resistance outcomes in invasive methicillin-resistant Staphylococcus aureus infections in the United States using chain graphs
Love, W. J., Wang, C. A., & Lanzas, C. (2021, November 14). (Vol. 11). Vol. 11.
2021 journal article
Inferring environmental transmission using phylodynamics: a case-study using simulated evolution of an enteric pathogen
JOURNAL OF THE ROYAL SOCIETY INTERFACE, 18(179).
2021 journal article
Mathematically modeling the effect of touch frequency on the environmental transmission of Clostridioides difficile in healthcare settings
MATHEMATICAL BIOSCIENCES, 340.
2021 article
Modelling the role of mortality-based response triggers on the effectiveness of African swine fever control strategies
Machado, G., Farthing, T. S., Andraud, M., Nunes Lopes, F. P., & Lanzas, C. (2021, October 15). TRANSBOUNDARY AND EMERGING DISEASES, Vol. 10.
Contributors: G. Machado n , T. Farthing n , M. Andraud *, F. Lopes* & n
2021 article
When can we stop wearing masks? Agent-based modeling to identify when vaccine coverage makes nonpharmaceutical interventions for reducing SARS-CoV-2 infections redundant in indoor gatherings
Farthing, T. S., & Lanzas, C. (2021, April 27). (Vol. 4). Vol. 4.
2020 journal article
Accounting for space and uncertainty in real‐time location system‐derived contact networks
Ecology and Evolution.
2020 article
Shared Multidrug Resistance Patterns in Chicken-Associated Escherichia coli Identified by Association Rule Mining (vol 10, 687, 2019)
Cazer, C. L., Al-Mamun, M. A., Kaniyamattam, K., Love, W. J., Booth, J. G., Lanzas, C., & Grohn, Y. T. (2020, June 30). FRONTIERS IN MICROBIOLOGY, Vol. 11.
2019 journal article
Ecological and Socioeconomic Factors Associated with Bartonella henselae Exposure in Dogs Tested for Vector-Borne Diseases in North Carolina
Vector-Borne and Zoonotic Diseases, 19(8), 582–595.
2019 journal article
Estimation of multidrug resistance variability in the National Antimicrobial Monitoring System
PREVENTIVE VETERINARY MEDICINE, 167, 137–145.
2019 journal article
Metapopulation Model from Pathogen's Perspective: A Versatile Framework to Quantify Pathogen Transfer and Circulation between Environment and Hosts
SCIENTIFIC REPORTS, 9.
2019 journal article
Multi-scale dynamics of infectious diseases
Interface Focus, 10(1), 20190118.
2019 journal article
On modelling environmentally transmitted pathogens
Interface Focus, 10(1).
Contributors: , K. Davies n, S. Erwin n & D. Dawson n n
2019 journal article
Shared Multidrug Resistance Patterns in Chicken-Associated Escherichia coli Identified by Association Rule Mining
FRONTIERS IN MICROBIOLOGY, 10.
2019 journal article
Transmission on empirical dynamic contact networks is influenced by data processing decisions
EPIDEMICS, 26, 32–42.
2018 journal article
Inferring the interaction structure of resistance to antimicrobials
PREVENTIVE VETERINARY MEDICINE, 152, 81–88.
2018 journal article
Investigating behavioral drivers of seasonal Shiga-Toxigenic Escherichia Coli (STEC) patterns in grazing cattle using an agent-based model
PLOS ONE, 13(10).
2018 journal article
Phenotypical resistance correlation networks for 10 non-typhoidal Salmonella subpopulations in an active antimicrobial surveillance programme.
Epidemiology and Infection.
2018 journal article
Shifts in the Gut Metabolome and Clostridium difficile Transcriptome throughout Colonization and Infection in a Mouse Model
MSPHERE, 3(2).
Contributors: J. Fletcher n, S. Erwin n , n & C. Theriot n
2017 review
A proposed analytic framework for determining the impact of an antimicrobial resistance intervention
[Review of ]. ANIMAL HEALTH RESEARCH REVIEWS, 18(1), 1–25.
2017 journal article
Arresting Contagion: Science, Policy, and Conflicts Over Animal Disease Control. By Alan L. Olmstead and Paul W. Rhode. Cambridge (Massachusetts): Harvard University Press. $49.95. xi + 465 p.; ill.; index. ISBN: 978-0-674-72877-6. 2015.
The Quarterly Review of Biology, 92(4), 456–457.
2017 chapter
Mathematical Modeling of the Effects of Nutrient Competition and Bile Acid Metabolism by the Gut Microbiota on Colonization Resistance Against Clostridium difficile
In Association for Women in Mathematics Series (pp. 137–161).
2017 journal article
Optimal control of vaccination rate in an epidemiological model of Clostridium difficile transmission
JOURNAL OF MATHEMATICAL BIOLOGY, 75(6-7), 1693–1713.
2017 journal article
Pathogen transfer through environment-host contact: an agent-based queueing theoretic framework
MATHEMATICAL MEDICINE AND BIOLOGY-A JOURNAL OF THE IMA, 35(3), 409–425.
2016 journal article
An Evaluation of Food as a Potential Source for Clostridium difficile Acquisition in Hospitalized Patients
INFECTION CONTROL AND HOSPITAL EPIDEMIOLOGY, 37(12), 1401–1407.
2016 journal article
Antimicrobial Stewardship and Environmental Decontamination for the Control of Clostridium difficile Transmission in Healthcare Settings
BULLETIN OF MATHEMATICAL BIOLOGY, 79(1), 36–62.
2016 journal article
Basic Reproduction Number and Transmission Dynamics of Common Serogroups of Enterohemorrhagic Escherichia coli
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 82(18), 5612–5620.
2016 journal article
Distinction and connection between contact network, social network, and disease transmission network
PREVENTIVE VETERINARY MEDICINE, 131, 8–11.
Contributors: S. Chen n & n
2016 journal article
Epigenetics, obesity and early-life cadmium or lead exposure
EPIGENOMICS, 9(1), 57–75.
2016 journal article
Markov Networks of Collateral Resistance: National Antimicrobial Resistance Monitoring System Surveillance Results from Escherichia coli Isolates, 2004-2012
PLOS COMPUTATIONAL BIOLOGY, 12(11).
Ed(s): M. Tanaka
2016 journal article
Mathematical modeling tools to study preharvest food safety
Microbiology Spectrum, 4(4).
2016 journal article
Monitoring Antimicrobial Resistance in the Food Supply Chain and Its Implications for FDA Policy Initiatives
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 60(9), 5302–5311.
2015 journal article
Complex system modelling for veterinary epidemiology
Preventive Veterinary Medicine, 118(2-3), 207–214.
Contributors: & S. Chen * *
2015 journal article
Spatial-Temporal Dynamics of High-Resolution Animal Networks: What Can We Learn from Domestic Animals?
PLOS ONE, 10(6).
Contributors: S. Chen n, A. Ilany *, B. White *, M. Sanderson* & n
2014 journal article
Accurate prediction of major histocompatibility complex class II epitopes by sparse representation via ℓ 1-minimization
BioData Mining.
Contributors: C. Aguilar-Bonavides *, R. Sanchez-Arias * & *
2014 journal article
Effectiveness of screening hospital admissions to detect asymptomatic carriers of Clostridium difficile: A modeling evaluation
Infection Control and Hospital Epidemiology, 35(8), 1043–1050.
Contributors: & E. Dubberke * *
2014 journal article
Highly dynamic animal contact network and implications on disease transmission
Scientific Reports, 4.
Contributors: S. Chen *, B. White *, M. Sanderson*, D. Amrine *, A. Ilany * & *
2013 journal article
Evaluating targets for control of plasmid-mediated antimicrobial resistance in enteric commensals of beef cattle: A modelling approach
Epidemiology and Infection, 141(11), 2294–2312.
Contributors: V. Volkova, Z. Lu*, * & Y. Grohn *
2013 journal article
Evalution of the "Iceberg Phenomenon" in Johne's Disease through Mathematical Modelling
PLoS ONE, 8(10).
Contributors: G. Magombedze *, C. Ngonghala * & *
2013 journal article
Modelling dynamics of plasmid-gene mediated antimicrobial resistance in enteric bacteria using stochastic differential equations
Scientific Reports, 3.
Contributors: V. Volkova*, Z. Lu*, * , H. Scott * & Y. Gröhn *
2013 journal article
Temporal-spatial heterogeneity in animal-environment contact: Implications for the exposure and transmission of pathogens
Scientific Reports, 3.
Contributors: S. Chen *, M. Sanderson, B. White *, D. Amrine & *
2012 journal article
Investigating effects of between- and within-host variability on Escherichia coli O157 shedding pattern and transmission
Preventive Veterinary Medicine, 109(1-2), 47–57.
Contributors: S. Chen*, M. Sanderson * & *
2012 journal article
Mathematical model of plasmid-mediated resistance to ceftiofur in commensal enteric escherichia coli of cattle
PLoS ONE, 7(5).
Contributors: V. Volkova*, * , Z. Lu* & Y. Gröhn *
2011 journal article
Epidemiological model for Clostridium difficile transmission in healthcare settings
Infection Control and Hospital Epidemiology, 32(6), 553–561.
Contributors: , E. Dubberke *, Z. Lu*, K. Reske * & Y. Gröhn * *
2010 journal article
Mathematical modeling of the transmission and control of foodborne pathogens and antimicrobial resistance at preharvest
Foodborne Pathogens and Disease, 8(1), 1–10.
Contributors: , Z. Lu* & Y. Gröhn * *
2010 journal article
The ecology and pathobiology of Clostridium difficile infections: An interdisciplinary challenge
Zoonoses and Public Health, 58(1), 4–20.
Contributors: E. Dubberke *, D. Haslam *, * , L. Bobo*, C. Burnham *, Y. Gröhn *, P. Tarr *
2010 journal article
Transmission dynamics of a multidrug-resistant salmonella typhimurium outbreak in a dairy farm
Foodborne Pathogens and Disease, 7(4), 467–474.
Contributors: , L. Warnick *, K. James*, E. Wright *, M. Wiedmann * & Y. Gröhn * *
2009 journal article
Development of a mechanistic model to represent the dynamics of particle flow out of the rumen and to predict rate of passage of forage particles in dairy cattle
Journal of Dairy Science, 92(8), 3981–4000.
Contributors: S. Seo *, * , L. Tedeschi *, A. Pell * & D. Fox*
2009 journal article
Model or meal? Farm animal populations as models for infectious diseases of humans
Nature Reviews Microbiology, 8(2), 139–148.
Contributors: , P. Ayscue*, R. Ivanek * & Y. Gröhn * *
2009 journal article
Modeling on-farm Escherichia coli O157:H7 population dynamics
Foodborne Pathogens and Disease, 6(4), 461–470.
Contributors: P. Ayscue*, * , R. Ivanek * & Y. Gröhn *
2008 journal article
Improved feed protein fractionation schemes for formulating rations with the cornell net carbohydrate and protein system
Journal of Dairy Science, 91(12), 4881–4891.
Contributors: , G. Broderick * & D. Fox* *
2008 journal article
The effect of heterogeneous infectious period and contagiousness on the dynamics of Salmonella transmission in dairy cattle
Epidemiology and Infection, 136(11), 1496–1510.
Contributors: , S. Brien *, R. Ivanek *, Y. Lo *, P. Chapagain *, K. Ray *, P. Ayscue*, L. Warnick *, Y. Gröhn * *
2008 journal article
The risk and control of Salmonella outbreaks in calf-raising operations: A mathematical modeling approach
Veterinary Research, 39(6).
Contributors: , L. Warnick *, R. Ivanek *, P. Ayscue*, D. Nydam * & Y. Gröhn * *
2007 journal article
A revised CNCPS feed carbohydrate fractionation scheme for formulating rations for ruminants
Animal Feed Science and Technology, 136(3-4), 167–190.
Contributors: , C. Sniffen, S. Seo *, L. Tedeschi * & D. Fox* *
2007 journal article
Development of a mechanistic model to represent the dynamics of liquid flow out of the rumen and to predict the rate of passage of liquid in dairy cattle
Journal of Dairy Science, 90(2), 840–855. http://www.scopus.com/inward/record.url?eid=2-s2.0-34247890082&partnerID=MN8TOARS
2007 journal article
Evaluation of protein fractionation systems used in formulating rations for dairy cattle
Journal of Dairy Science, 90(1), 507–521. http://www.scopus.com/inward/record.url?eid=2-s2.0-35748969906&partnerID=MN8TOARS
2006 journal article
Digestion kinetics of dried cereal grains
Animal Feed Science and Technology, 136(3-4), 265–280.
Contributors: , D. Fox* & A. Pell * *
2005 journal article
Development and evaluation of empirical equations to predict feed passage rate in cattle
Animal Feed Science and Technology, 128(1-2), 67–83.
Contributors: S. Seo *, L. Tedeschi *, * , C. Schwab * & D. Fox*
Updated: July 29th, 2015 16:26
2015 - present
Funding history based on the linked ORCID record. Updated: November 12th, 2021 15:56
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