Chen Li

College of Engineering

Works (9)

Updated: September 11th, 2023 08:10

2023 journal article

COMBINe enables automated detection and classification of neurons and astrocytes in tissue-cleared mouse brains

CELL REPORTS METHODS, 3(4).

By: Y. Cai n, X. Zhang n, C. Li n, H. Ghashghaei  n & A. Greenbaum n

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
MeSH headings : Animals; Mice; Astrocytes; Excipients; Microscopy, Fluorescence; Neurons; Prosencephalon
Source: Web Of Science
Added: May 30, 2023

2023 journal article

Deep learning-based adaptive optics for light sheet fluorescence microscopy

BIOMEDICAL OPTICS EXPRESS, 14(6), 2905–2919.

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
Source: Web Of Science
Added: July 24, 2023

2023 journal article

Tissue clearing and three-dimensional imaging of the whole cochlea and vestibular system from multiple large-animal models

STAR PROTOCOLS, 4(2).

By: A. Moatti n , Y. Cai n, C. Li n, K. Popowski n , K. Cheng n, F. Ligler*, A. Greenbaum n

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
author keywords: imaged cochleae using open -source software.; several mm; larger animal inner; open -source software
Source: Web Of Science
Added: September 5, 2023

2022 article

Deep learning-based autofocus method enhances image quality in light-sheet fluorescence microscopy: publishers note (vol 12, pg 5214, 2021)

LI, C., Moatti, A., Zhang, X., Ghashghaei, H. T., & Greenbaum, A. (2022, January 1). BIOMEDICAL OPTICS EXPRESS, Vol. 13, pp. 373–373.

By: C. Li n, A. Moatti n , X. Zhang n, H. Ghashghaei  n & A. Greenbaum n

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
Source: Web Of Science
Added: January 10, 2022

2022 journal article

Illumination angle correction during image acquisition in light-sheet fluorescence microscopy using deep learning

BIOMEDICAL OPTICS EXPRESS, 13(2), 888–901.

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
Source: Web Of Science
Added: February 14, 2022

2022 journal article

Ontogeny of cellular organization and LGR5 expression in porcine cochlea revealed using tissue clearing and 3D imaging

ISCIENCE, 25(8).

By: A. Moatti n , C. Li n, S. Sivadanam  n, Y. Cai n, J. Ranta n, J. Piedrahita n, A. Cheng *, F. Ligler n, A. Greenbaum n

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
Source: Web Of Science
Added: December 19, 2022

2022 journal article

Quantitative analysis of illumination and detection corrections in adaptive light sheet fluorescence microscopy

BIOMEDICAL OPTICS EXPRESS, 13(5), 2960–2974.

By: M. Rai n, C. Li n & A. Greenbaum n

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
Source: Web Of Science
Added: May 31, 2022

2021 journal article

Deep learning-based autofocus method enhances image quality in light-sheet fluorescence microscopy

BIOMEDICAL OPTICS EXPRESS, 12(8), 5214–5226.

By: C. Li n, A. Moatti n , X. Zhang n, H. Ghashghaei  n & A. Greenabum n

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
Sources: Web Of Science, ORCID
Added: August 16, 2021

2020 journal article

Three-dimensional imaging of intact porcine cochlea using tissue clearing and custom-built light-sheet microscopy

BIOMEDICAL OPTICS EXPRESS, 11(11), 6181–6196.

By: A. Moatti n , Y. Cai n, C. Li n, T. Sattler n, L. Edwards n , J. Piedrahita n, F. Ligler n, A. Greenbaum n

co-author countries: United States of America πŸ‡ΊπŸ‡Έ
Sources: Web Of Science, ORCID
Added: December 11, 2020

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