Works (12)

Updated: September 1st, 2023 05:00

2023 article

A chromosome-level genome assembly of longnose gar, Lepisosteus osseus

Mallik, R., Carlson, K. B., Wcisel, D. J., Fisk, M., Yoder, J. A., & Dornburg, A. (2023, April 29). (N. Whiteman, Ed.). G3-GENES GENOMES GENETICS, Vol. 4.

By: R. Mallik*, K. Carlson n, D. Wcisel n, M. Fisk*, J. Yoder n & A. Dornburg*

co-author countries: United States of America 🇺🇸

Ed(s): N. Whiteman

author keywords: teleost genome duplication; holostei; longnose gar; chromosome level assembly; living fossil; transposable elements
MeSH headings : Humans; Animals; Evolution, Molecular; Fishes / genetics; Genome; Chromosomes / genetics; Phylogeny
Sources: Web Of Science, ORCID
Added: June 12, 2023

2023 article

Ancient fish lineages illuminate toll-like receptor diversification in early vertebrate evolution

Carlson, K. B., Nguyen, C., Wcisel, D. J., Yoder, J. A., & Dornburg, A. (2023, August 9). IMMUNOGENETICS, Vol. 8.

By: K. Carlson n, C. Nguyen*, D. Wcisel n, J. Yoder n & A. Dornburg*

co-author countries: United States of America 🇺🇸
author keywords: Vertebrate; TLR; Immunogenetics; Evolution; Actinopterygii; Polypterus senegalus
Sources: Web Of Science, ORCID
Added: August 28, 2023

2022 article

A highly diverse set of novel immunoglobulin-like transcript (NILT) genes in zebrafish indicates a wide range of functions with complex relationships to mammalian receptors

Wcisel, D. J., Dornburg, A., McConnell, S. C., Hernandez, K. M., Andrade, J., Jong, J. L. O., … Yoder, J. A. (2022, July 23). IMMUNOGENETICS, Vol. 7.

co-author countries: United States of America 🇺🇸
author keywords: Innate immunity; Gene content variation; Alternative immune haplotypes; Gene family evolution; Mammalian CD300 (CMRF35); Mammalian NCR2 (NKp44)
MeSH headings : Animals; Zebrafish / genetics; Amino Acid Sequence; Receptors, Immunologic / genetics; Genome / genetics; Immunoglobulins / genetics; Phylogeny; Mammals / genetics
Sources: Web Of Science, ORCID
Added: July 23, 2022

2022 article

Transcriptome annotation reveals minimal immunogenetic diversity among Wyoming toads, Anaxyrus baxteri

Carlson, K. B., Wcisel, D. J., Ackerman, H. D., Romanet, J., Christiansen, E. F., Niemuth, J. N., … Yoder, J. A. (2022, April 28). CONSERVATION GENETICS, Vol. 4.

By: K. Carlson n, D. Wcisel n, H. Ackerman n, J. Romanet n, E. Christiansen n, J. Niemuth n, C. Williams n, M. Breen n ...

co-author countries: United States of America 🇺🇸
author keywords: Amphibian; Bufonidae; Immunogenetics; MHC; TLR; Transcriptomics
Sources: Web Of Science, ORCID
Added: April 29, 2022

2021 journal article

Single-minded 2 is required for left-right asymmetric stomach morphogenesis

DEVELOPMENT, 148(17).

By: B. Wyatt n, N. Amin n, K. Bagley n, D. Wcisel n, M. Dush n, J. Yoder n, N. Nascone-Yoder n

co-author countries: United States of America 🇺🇸
author keywords: right asymmetry; Stomach; Morphogenesis; Pitx2; Sim2; Down syndrome; Frog
MeSH headings : Animals; Anura; Basic Helix-Loop-Helix Transcription Factors / genetics; Basic Helix-Loop-Helix Transcription Factors / metabolism; Body Patterning; Embryo, Nonmammalian; Endoderm / embryology; Endoderm / metabolism; Gene Expression Regulation, Developmental; Homeodomain Proteins / genetics; Homeodomain Proteins / metabolism; Morphogenesis; Stomach / embryology; Transcription Factors / genetics; Transcription Factors / metabolism
Sources: Web Of Science, ORCID
Added: September 27, 2021

2021 article

The bowfin genome illuminates the developmental evolution of ray-finned fishes

Thompson, A. W., Hawkins, M. B., Parey, E., Wcisel, D. J., Ota, T., Kawasaki, K., … Braasch, I. (2021, August 30). NATURE GENETICS, Vol. 8.

By: A. Thompson*, M. Hawkins*, E. Parey*, D. Wcisel n, T. Ota*, K. Kawasaki*, E. Funk*, M. Losilla* ...

co-author countries: Switzerland 🇨🇭 France 🇫🇷 Japan 🇯🇵 United States of America 🇺🇸
MeSH headings : Animals; Biological Evolution; Chromatin / genetics; Evolution, Molecular; Fishes; Genome / genetics; Skates, Fish / genetics; Skates, Fish / immunology; Skates, Fish / physiology; Whole Genome Sequencing
Sources: Web Of Science, ORCID
Added: September 7, 2021

2017 journal article

Spotted Gar and the Evolution of Innate Immune Receptors

Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, 328(7), 666–684.

By: D. Wcisel n, T. Ota*, G. Litman* & J. Yoder n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
MeSH headings : Amino Acid Sequence; Animals; Biological Evolution; Fishes / genetics; Fishes / immunology; Gene Expression Regulation / immunology; Immunity, Innate / genetics; Immunity, Innate / physiology
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2016 journal article

Alternative haplotypes of antigen processing genes in zebrafish diverged early in vertebrate evolution

Proceedings of the National Academy of Sciences, 113(34), E5014–E5023.

By: S. McConnell*, K. Hernandez*, D. Wcisel n, R. Kettleborough*, D. Stemple*, J. Yoder n, J. Andrade*, J. de Jong*

co-author countries: United Kingdom of Great Britain and Northern Ireland 🇬🇧 United States of America 🇺🇸
author keywords: comparative genomics; proteasome and TAP evolution; major histocompatibility; MHC class I pathway; CG2 clonal zebrafish
MeSH headings : Animals; Antigen Presentation; Biological Evolution; Cloning, Organism; Cysteine Endopeptidases / classification; Cysteine Endopeptidases / genetics; Cysteine Endopeptidases / immunology; Genome; Haplotypes; High-Throughput Nucleotide Sequencing; Histocompatibility Antigens Class I / classification; Histocompatibility Antigens Class I / genetics; Histocompatibility Antigens Class I / immunology; Phylogeny; Proteasome Endopeptidase Complex / genetics; Proteasome Endopeptidase Complex / immunology; Protein Isoforms / classification; Protein Isoforms / genetics; Protein Isoforms / immunology; Transcriptome; Zebrafish / classification; Zebrafish / genetics; Zebrafish / immunology; Zebrafish Proteins / classification; Zebrafish Proteins / genetics; Zebrafish Proteins / immunology
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2016 journal article

The confounding complexity of innate immune receptors within and between teleost species

Fish & Shellfish Immunology, 53, 24–34.

By: D. Wcisel n & J. Yoder n

co-author countries: United States of America 🇺🇸
author keywords: Gene content haplotype; Novel immune-type receptors; Diverse immunoglobulin domain containing proteins; Polymeric immunoglobulin receptor-like proteins; Novel immunoglobulin-like transcripts
MeSH headings : Animals; Fishes / genetics; Fishes / immunology; Genetic Variation; Genome; Immunity, Innate; Receptors, Immunologic / genetics
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2016 journal article

The identification of additional zebrafish DICP genes reveals haplotype variation and linkage to MHC class I genes

Immunogenetics, 68(4), 295–312.

By: I. Rodriguez-Nunez n, D. Wcisel n, R. Litman*, G. Litman*, J. Yoder n & Immunogenetics

co-author countries: United States of America 🇺🇸
author keywords: Innate immunity; Immunoglobulin domain; Haplotype; Polymorphism; Immune receptor
MeSH headings : Animals; Gene Expression Regulation, Developmental; Genes, MHC Class I / genetics; Genes, MHC Class I / immunology; Genetic Linkage; Haplotypes; Immunity, Innate; Immunoglobulins / genetics; Lipids / genetics; Receptors, Immunologic / genetics; Receptors, Immunologic / immunology; Zebrafish / genetics; Zebrafish / growth & development; Zebrafish / immunology; Zebrafish Proteins / genetics; Zebrafish Proteins / immunology
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2016 journal article

The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons

Nature Genetics, 48(4), 427–437.

By: I. Braasch*, A. Gehrke*, J. Smith*, K. Kawasaki*, T. Manousaki*, J. Pasquier*, A. Amores*, T. Desvignes* ...

co-author countries: Brazil 🇧🇷 Canada 🇨🇦 China 🇨🇳 Germany 🇩🇪 Spain 🇪🇸 France 🇫🇷 United Kingdom of Great Britain and Northern Ireland 🇬🇧 Greece 🇬🇷 Japan 🇯🇵 Sweden 🇸🇪 Singapore 🇸🇬 United States of America 🇺🇸
MeSH headings : Animals; Evolution, Molecular; Female; Fishes / genetics; Fishes / metabolism; Genome; Humans; Karyotype; Models, Genetic; Organ Specificity; Sequence Analysis, DNA; Transcriptome
Sources: NC State University Libraries, ORCID, Crossref
Added: August 6, 2018

2014 journal article

Multigene families of immunoglobulin domain-containing innate immune receptors in zebrafish: Deciphering the differences

Developmental & Comparative Immunology, 46(1), 24–34.

By: I. Rodríguez-Nunez n, D. Wcisel n, G. Litman* & J. Yoder n

co-author countries: United States of America 🇺🇸
author keywords: Novel immune-type receptors; Diverse immunoglobulin domain containing proteins; Polymeric immunoglobulin receptor-like proteins; Novel immunoglobulin-like transcripts; Leukocyte immune-type receptors
MeSH headings : Animals; Haplotypes; Receptors, Immunologic / chemistry; Receptors, Immunologic / genetics; Receptors, Immunologic / immunology; Zebrafish / genetics; Zebrafish / immunology; Zebrafish Proteins / chemistry; Zebrafish Proteins / genetics; Zebrafish Proteins / immunology
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

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