Works (50)

2022 article

Assessing the Nucleotide-Level Impact of Spaceflight Stress using RNA-Sequencing Data

Knight, M. S., Doherty, C. J., & Nielsen, D. M. (2022, December 2).

By: M. Knight, C. Doherty & D. Nielsen

Source: ORCID
Added: December 3, 2022

2019 journal article

Interferon-λ3 Promotes Epithelial Defense and Barrier Function Against Cryptosporidium parvum Infection

Cellular and Molecular Gastroenterology and Hepatology, 8(1), 1–20.

By: S. Ferguson, D. Foster, B. Sherry, S. Magness, D. Nielsen & J. Gookin

Sources: Web Of Science, ORCID, Crossref
Added: July 15, 2019

2017 journal article

Genetics of Hereditary Ataxia in Scottish Terriers

Journal of Veterinary Internal Medicine, 31(4), 1132–1139.

By: G. Urkasemsin, D. Nielsen, A. Singleton*, S. Arepalli*, D. Hernandez*, C. Agler n, N. Olby

Sources: Crossref, ORCID, NC State University Libraries
Added: August 6, 2018

2017 journal article

Networks Underpinning Symbiosis Revealed Through Cross-Species eQTL Mapping

Genetics, 206(4), 2175–2184.

By: Y. Guo, S. Fudali*, J. Gimeno*, P. DiGennaro n, S. Chang, V. Williamson*, D. Bird, D. Nielsen

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2015 journal article

Increased exposure to acute thermal stress is associated with a non-linear increase in recombination frequency and an independent linear decrease in fitness in Drosophila

BMC Evolutionary Biology, 15.

By: S. Jackson n, D. Nielsen & N. Singh

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2015 journal article

Maize Homologs of Hydroxycinnamoyltransferase, a Key Enzyme in Lignin Biosynthesis, Bind the Nucleotide Binding Leucine-Rich Repeat Rp1 Proteins to Modulate the Defense Response

Plant Physiol, 169(3), 2230–2243.

By: G. Wang, Y. He, R. Strauch, B. Olukolu, D. Nielsen, X. Li, P. Balint-Kurti

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2014 journal article

A Genome-Wide Association Study of the Maize Hypersensitive Defense Response Identifies Genes That Cluster in Related Pathways

PLoS Genetics, 10(8), e1004562.

By: B. Olukolu n, G. Wang n, V. Vontimitta*, B. Venkata*, S. Marla*, J. Ji*, E. Gachomo*, K. Chu* ...

Ed(s): J. McDowell

Sources: Crossref, ORCID
Added: October 23, 2019

2014 journal article

Aspergillus flavus infection induces transcriptional and physical changes in developing maize kernels

Frontiers in Microbiology, 5.

By: A. Dolezal*, X. Shu n, G. OBrian n, D. Nielsen, C. Woloshuk*, R. Boston n, G. Payne n

Sources: NC State University Libraries, Crossref, ORCID
Added: August 6, 2018

2014 journal article

Canine hereditary ataxia in old english sheepdogs and gordon setters is associated with a defect in the autophagy gene encoding RAB24

PLoS Genet, 10(2), e1003991.

By: C. Agler, D. Nielsen, G. Urkasemsin, A. Singleton, N. Tonomura, S. Sigurdsson, R. Tang, K. Linder ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2014 journal article

Improved structural annotation of protein-coding genes in the Meloidogyne hapla genome using RNA-Seq

Worm, 3(1), e29158.

By: Y. Guo n, D. Bird n & D. Nielsen

Sources: Crossref, ORCID
Added: January 7, 2020

2013 journal article

A method for detecting hidden additivity in two-factor unreplicated experiments

Computational Statistics & Data Analysis, 67, 95–104.

By: C. Franck*, D. Nielsen & J. Osborne

Sources: Crossref, ORCID, NC State University Libraries
Added: August 6, 2018

2013 journal article

Gene Profiling of Canine B-Cell Lymphoma Reveals Germinal Center and Postgerminal Center Subtypes with Different Survival Times, Modeling Human DLBCL

Cancer Research, 73(16), 5029–5039.

By: K. Richards*, A. Motsinger-Reif, H. Chen n, Y. Fedoriw*, C. Fan*, D. Nielsen, G. Small*, R. Thomas n ...

Sources: NC State University Libraries, ORCID, Crossref
Added: August 6, 2018

2013 journal article

Gene selection and cancer type classification of diffuse large-B-cell lymphoma using a bivariate mixture model for two-species data

Hum Genomics, 7, 2.

By: Y. Su, D. Nielsen, L. Zhu, K. Richards, S. Suter, M. Breen, A. Motsinger-Reif, J. Osborne

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2013 journal article

Genomic architecture of adaptive color pattern divergence and convergence in Heliconius butterflies

Genome Research, 23(8), 1248–1257.

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2013 journal article

Localization, morphology and transcriptional profile of Aspergillus flavus during seed colonization

Molecular Plant Pathology, 14(9), 898–909.

By: A. Dolezal n, G. Obrian, D. Nielsen, C. Woloshuk*, R. Boston & G. Payne n

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2011 journal article

Characterization of canine osteosarcoma by array comparative genomic hybridization and RT-qPCR: Signatures of genomic imbalance in canine osteosarcoma parallel the human counterpart

Genes, Chromosomes and Cancer, 50(11), 859–874.

By: A. Angstadt n, A. Motsinger-Reif, R. Thomas, W. Kisseberth*, C. Couto*, D. Duval*, D. Nielsen, J. Modiano*, M. Breen

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2011 journal article

Gene Expression profile and response to maize kernels by Aspergillus flavus

Phytopathology, 101(7), 797–804.

By: B. Reese*, G. Payne, D. Nielsen & C. Woloshuk

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2011 journal article

Genome-wide linkage study of atopic dermatitis in West Highland White Terriers

BMC Genetics, 12(1), 37.

By: C. Salzmann n, T. Olivry, D. Nielsen, J. Paps n, T. Harris n & N. Olby

Sources: Crossref, ORCID
Added: August 29, 2019

2010 journal article

Genomic Hotspots for Adaptation: The Population Genetics of Müllerian Mimicry in Heliconius erato

PLoS Genetics, 6(2), e1000796.

By: B. Counterman n, F. Araujo-Perez*, H. Hines n, S. Baxter*, C. Morrison*, D. Lindstrom n, R. Papa*, L. Ferguson* ...

Ed(s): M. Nachman

Sources: Crossref, ORCID
Added: September 5, 2020

2009 journal article

Functional and geographical differentiation of candidate balanced polymorphisms in Arabidopsis thaliana

Molecular Ecology, 18(13), 2844–2855.

By: J. Reininga, D. Nielsen & M. Purugganan

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2009 journal article

Proceedings of the First International Conference on Toxicogenomics Integrated with Environmental Sciences (TIES-2007)

BMC Proceedings, 3(S2).

By: P. Bushel*, D. Nielsen & W. Tong*

Sources: Crossref, ORCID
Added: September 5, 2020

2008 journal article

Does strong linkage disequilibrium guarantee redundant association results?

Genetic Epidemiology, 32(6), 546–552.

Sources: Crossref, ORCID, NC State University Libraries
Added: August 6, 2018

2008 conference paper

Linkage Analysis in American Staffordshire Terriers with Hereditary Cerebellar Cortical Degeneration

Journal of Veterinary Internal Medicine, 22(3), 723–724.

By: N. Olby, T. Harris, P. Mehta, M. Breen, R. Thomas, R. Myers, D. Nielsen

Event: 26th Annual American College of Veterinary Internal Medicine Forum at San Antonio, TX on June 4-7, 2008

Source: NC State University Libraries
Added: March 19, 2021

2008 journal article

The effect of temperature on Natural Antisense Transcript (NAT) expression in Aspergillus flavus

Current Genetics, 54(5), 241–269.

By: C. Smith, D. Robertson n, B. Yates*, D. Nielsen, D. Brown n, R. Dean, G. Payne

Sources: Crossref, ORCID, NC State University Libraries
Added: August 6, 2018

2007 journal article

Comprehensive Transcriptome Profiling in Tomato Reveals a Role for Glycosyltransferase in Mi-Mediated Nematode Resistance

Plant Physiology, 144(2), 1079–1092.

Sources: ORCID, Crossref, NC State University Libraries
Added: August 6, 2018

2007 journal article

Elucidation of veA-dependent genes associated with aflatoxin and sclerotial production in Aspergillus flavus by functional genomics

Applied Microbiology and Biotechnology, 76(5), 1107–1118.

By: J. Cary*, G. OBrian, D. Nielsen, W. Nierman*, P. Harris-Coward*, J. Yu*, D. Bhatnagar*, T. Cleveland*, G. Payne, A. Calvo*

Sources: Crossref, ORCID, NC State University Libraries
Added: August 6, 2018

2006 journal article

A unified mixed-model method for association mapping that accounts for multiple levels of relatedness

Nature Genetics, 38(2), 203–208.

By: J. Yu*, G. Pressoir*, W. Briggs*, I. Vroh Bi*, M. Yamasaki*, J. Doebley*, M. McMullen*, B. Gaut* ...

Sources: ORCID, Crossref, NC State University Libraries
Added: August 6, 2018

2005 journal article

Association of genetic polymorphisms with risk of renal injury after coronary bypass graft surgery

American Journal of Kidney Diseases, 45(3), 519–530.

By: M. Stafford-Smith*, M. Podgoreanu*, M. Swaminathan*, B. Phillips-Bute*, J. Mathew*, E. Hauser*, M. Winn*, C. Milano* ...

Sources: Crossref, ORCID, NC State University Libraries
Added: August 6, 2018

2005 journal article

Genetic Polymorphisms and the Risk of Stroke After Cardiac Surgery

Stroke, 36(9), 1854–1858.

By: H. Grocott*, W. White*, R. Morris*, M. Podgoreanu*, J. Mathew*, D. Nielsen, D. Schwinn*, M. Newman*

Sources: Crossref, ORCID, NC State University Libraries
Added: August 6, 2018

2005 journal article

Measures of human population structure show heterogeneity among genomic regions

Genome Res, 15(11), 1468–1476.

By: B. Weir, L. Cardon, A. Anderson, D. Nielsen & W. Hill

Sources: ORCID, NC State University Libraries
Added: August 6, 2018

2005 journal article

Measures of human population structure show heterogeneity among genomic regions

Genome Research, 15(11), 1468–1476.

By: B. Weir n, L. Cardon, A. Anderson, D. Nelson & W. Hill

Source: Crossref
Added: March 5, 2021

2004 journal article

Effect of Two- and Three-Locus Linkage Disequilibrium on the Power to Detect Marker/Phenotype Associations

Genetics, 168(2), 1029–1040.

Sources: Crossref, ORCID, NC State University Libraries
Added: August 6, 2018

2004 conference paper

Multi-locus Linkage Disequilibrium and Haplotype-Based Tests of Association

Computational Methods for SNPs and Haplotype Inference, 139–139.

By: D. Nielsen

Event: DIMACS/RECOMB Satellite Workshop at Piscataway, New Jersey, USA on November 21-22, 2002

Sources: Crossref, ORCID
Added: March 5, 2021

2004 journal article

The Splicing Graph – A Tool for Visualising Gene Structure and Alternative Splicing

Future Drug Discovery, 62–65.

By: J. Leipzig, D. Nielsen & S. Heber

Source: NC State University Libraries
Added: March 19, 2021

2001 journal article

Applying Data Mining Techniques to the Mapping of Complex Disease Genes

Genetic Epidemiology, 21(S1), S435–S440.

By: W. Czika*, B. Weir*, S. Edwards*, R. Thompson*, D. Nielsen, J. Brocklebank*, C. Zinkus*, E. Martin*, K. Nobler

Sources: ORCID, Crossref, NC State University Libraries
Added: August 6, 2018

2001 journal article

Association Studies under General Disease Models

Theoretical Population Biology, 60(3), 253–263.

Sources: Crossref, ORCID, NC State University Libraries
Added: August 6, 2018

2001 journal article

Association mapping: where we’ve been, where we’re going

Expert Review of Molecular Diagnostics, 1(3), 334–342.

By: D. Nielsen & D. Zaykin n

Sources: ORCID, NC State University Libraries
Added: January 25, 2021

2001 journal article

Dwarf8 polymorphisms associate with variation in flowering time

Nature Genetics, 28(3), 286–289.

By: J. Thornsberry n, M. Goodman n, J. Doebley*, S. Kresovich*, D. Nielsen & E. Buckler n

Sources: ORCID, Crossref
Added: January 25, 2021

2001 personal communication

Dwarf8 polymorphisms associate with variation in flowering time

Source: NC State University Libraries
Added: August 6, 2018

2001 journal article

Evolution of the Simulated Data Problem

Genetic Epidemiology, 21(S1), S325–S331.

By: D. Thomas*, I. Borecki*, G. Thomson*, K. Weiss*, L. Almasy*, J. Blangero*, D. Nielsen, J. Terwilliger*, D. Zaykin, J. MacCluer*

Sources: ORCID, Crossref, NC State University Libraries
Added: August 6, 2018

2001 journal article

GAW12: Simulated Genome Scan, Sequence, and Family Data for a Common Disease

Genetic Epidemiology, 21(S1), S332–S338.

By: L. Almasy*, J. Terwilliger*, D. Nielsen, T. Dyer*, D. Zaykin & J. Blangero*

Sources: Crossref, ORCID, NC State University Libraries
Added: August 6, 2018

1999 journal article

A classical setting for associations between markers and loci affecting quantitative traits

Genetical Research, 74(3), 271–277.

Sources: Crossref, ORCID, NC State University Libraries
Added: August 6, 2018

1999 journal article

Localization of the locus causing Spider Lamb Syndrome to the distal end of ovine Chromosome 6

Mammalian Genome, 10(1), 35–38.

By: N. Cockett*, T. Shay*, J. Beever*, D. Nielsen, J. Albretsen*, M. Georges*, K. Peterson*, A. Stephens* ...

Sources: ORCID, Crossref, NC State University Libraries
Added: August 6, 2018

1999 journal article

Novel tests for marker-disease association using the collaborative study on the genetics of alcoholism data

Genetic Epidemiology, 17(S1), S265–S270.

By: D. Nielsen & D. Zaykin n

Sources: Crossref, ORCID
Added: September 5, 2020

1998 journal article

Detecting Marker-Disease Association by Testing for Hardy-Weinberg Disequilibrium at a Marker Locus

The American Journal of Human Genetics, 63(5), 1531–1540.

Sources: Crossref, ORCID, NC State University Libraries
Added: August 6, 2018

1996 journal article

Polar Overdominance at the Ovine callipyge Locus

Science, 273(5272), 236–238.

By: N. Cockett*, S. Jackson*, T. Shay*, F. Farnir*, S. Berghmans*, G. Snowder*, D. Nielsen, M. Georges*

Sources: ORCID, Crossref
Added: January 25, 2021

1995 journal article

Mapping Quantitative Trait Loci Controlling Milk Production in Dairy Cattle by Exploiting Progeny Testing

Genetics, 139(2), 907–920.

By: M. Georges*, D. Nielsen, M. Mackinnon*, A. Mishra*, R. Okimoto*, A. Pasquino*, L. Sargeant*, A. Sorensen* ...

Sources: ORCID, NC State University Libraries
Added: January 25, 2021

1994 journal article

Chromosomal localization of the callipyge gene in sheep (Ovis aries) using bovine DNA markers.

Proceedings of the National Academy of Sciences, 91(8), 3019–3023.

By: N. Cockett*, S. Jackson*, T. Shay*, D. Nielsen, S. Moore*, M. Steele*, W. Barendse*, R. Green*, M. Georges*

Sources: Crossref, ORCID
Added: September 5, 2020

1993 journal article

Microsatellite mapping of a gene affecting horn development in Bos taurus

Nature Genetics, 4(2), 206–210.

By: M. Georges*, R. Drinkwater*, T. King*, A. Mishra*, S. Moore*, D. Nielsen, L. Sargeant*, A. Sorensen* ...

Sources: ORCID, Crossref
Added: January 25, 2021

1993 journal article

Microsatellite mapping of the gene causing weaver disease in cattle will allow the study of an associated quantitative trait locus.

Proceedings of the National Academy of Sciences, 90(3), 1058–1062.

By: M. Georges*, A. Dietz*, A. Mishra*, D. Nielsen, L. Sargeant*, A. Sorensen*, M. Steele*, X. Zhao*, H. Leipold*, J. Womack*

Sources: ORCID, Crossref
Added: January 25, 2021