2022 article
Assessing the Nucleotide-Level Impact of Spaceflight Stress using RNA-Sequencing Data
Knight, M. S., Doherty, C. J., & Nielsen, D. M. (2022, December 2).
2019 journal article
Interferon-ฮป3 Promotes Epithelial Defense and Barrier Function Against Cryptosporidium parvum Infection
Cellular and Molecular Gastroenterology and Hepatology, 8(1), 1โ20.
2017 journal article
Genetics of Hereditary Ataxia in Scottish Terriers
Journal of Veterinary Internal Medicine, 31(4), 1132โ1139.
2017 journal article
Networks Underpinning Symbiosis Revealed Through Cross-Species eQTL Mapping
Genetics, 206(4), 2175โ2184.
Contributors: Y. Guo n, S. Fudali n, J. Gimenoโ n, P. Digennaroโ n, S. Chang n, V. Williamsonโ*, D. Bird nโ, nโ
2015 journal article
Increased exposure to acute thermal stress is associated with a non-linear increase in recombination frequency and an independent linear decrease in fitness in Drosophila
BMC EVOLUTIONARY BIOLOGY, 15.
2015 journal article
Maize Homologs of Hydroxycinnamoyltransferase, a Key Enzyme in Lignin Biosynthesis, Bind the Nucleotide Binding Leucine-Rich Repeat Rp1 Proteins to Modulate the Defense Response
Plant Physiol, 169(3), 2230โ2243.
2014 journal article
A Genome-Wide Association Study of the Maize Hypersensitive Defense Response Identifies Genes That Cluster in Related Pathways
PLoS Genetics, 10(8), e1004562.
Contributors: B. Olukoluโ n, G. Wangโ n, V. Vontimitta*, B. Venkata*, S. Marlaโ*, J. Ji*, E. Gachomo*, K. Chu*
Ed(s): J. McDowell
2014 journal article
Aspergillus flavus infection induces transcriptional and physical changes in developing maize kernels
Frontiers in Microbiology, 5.
2014 journal article
Canine hereditary ataxia in old english sheepdogs and gordon setters is associated with a defect in the autophagy gene encoding RAB24
PLoS Genet, 10(2), e1003991.
2014 journal article
Improved structural annotation of protein-coding genes in the Meloidogyne hapla genome using RNA-Seq
Worm, 3(1), e29158.
2013 journal article
A method for detecting hidden additivity in two-factor unreplicated experiments
Computational Statistics & Data Analysis, 67, 95โ104.
2013 journal article
Gene Profiling of Canine B-Cell Lymphoma Reveals Germinal Center and Postgerminal Center Subtypes with Different Survival Times, Modeling Human DLBCL
Cancer Research, 73(16), 5029โ5039.
2013 journal article
Gene selection and cancer type classification of diffuse large-B-cell lymphoma using a bivariate mixture model for two-species data
Hum Genomics, 7, 2.
2013 journal article
Genomic architecture of adaptive color pattern divergence and convergence in Heliconius butterflies
GENOME RESEARCH, 23(8), 1248โ1257.
2013 journal article
Localization, morphology and transcriptional profile of Aspergillus flavus during seed colonization
MOLECULAR PLANT PATHOLOGY, 14(9), 898โ909.
2011 journal article
Characterization of Canine Osteosarcoma by Array Comparative Genomic Hybridization and RT-qPCR: Signatures of Genomic Imbalance in Canine Osteosarcoma Parallel the Human Counterpart
GENES CHROMOSOMES & CANCER, 50(11), 859โ874.
2011 journal article
Gene Expression profile and response to maize kernels by Aspergillus flavus
Phytopathology, 101(7), 797โ804.
2011 journal article
Genome-wide linkage study of atopic dermatitis in West Highland White Terriers
BMC Genetics, 12(1), 37.
Contributors: C. Salzmann n, T. Olivryโ n, nโ, J. Paps n, T. Harris n & N. Olby nโ
2010 journal article
Genomic Hotspots for Adaptation: The Population Genetics of Mรผllerian Mimicry in Heliconius erato
PLoS Genetics, 6(2), e1000796.
Ed(s): M. Nachman
2009 journal article
Functional and geographical differentiation of candidate balanced polymorphisms in Arabidopsis thaliana
MOLECULAR ECOLOGY, 18(13), 2844โ2855.
2009 journal article
Proceedings of the First International Conference on Toxicogenomics Integrated with Environmental Sciences (TIES-2007)
BMC Proceedings, 3(S2).
2008 journal article
Does strong linkage disequilibrium guarantee redundant association results?
Genetic Epidemiology, 32(6), 546โ552.
2008 conference paper
Linkage Analysis in American Staffordshire Terriers with Hereditary Cerebellar Cortical Degeneration
Journal of Veterinary Internal Medicine, 22(3), 723โ724.
Event: 26th Annual American College of Veterinary Internal Medicine Forum at San Antonio, TX on June 4-7, 2008
2008 journal article
The effect of temperature on Natural Antisense Transcript (NAT) expression in Aspergillus flavus
Current Genetics, 54(5), 241โ269.
2007 journal article
Comprehensive Transcriptome Profiling in Tomato Reveals a Role for Glycosyltransferase in Mi-Mediated Nematode Resistance
Plant Physiology, 144(2), 1079โ1092.
Contributors: J. Schaff n, D. Nielsen n, C. Smith n, E. Scholl n & D. Bird n
2007 journal article
Elucidation of veA-dependent genes associated with aflatoxin and sclerotial production in Aspergillus flavus by functional genomics
Applied Microbiology and Biotechnology, 76(5), 1107โ1118.
2006 journal article
A unified mixed-model method for association mapping that accounts for multiple levels of relatedness
Nature Genetics, 38(2), 203โ208.
Contributors: J. Yuโ*, G. Pressoirโ*, W. Briggs*, I. Bi*, M. Yamasakiโ*, J. Doebleyโ*, M. McMullen*, B. Gaut*
2005 journal article
Association of genetic polymorphisms with risk of renal injury after coronary bypass graft surgery
American Journal of Kidney Diseases, 45(3), 519โ530.
2005 journal article
Genetic Polymorphisms and the Risk of Stroke After Cardiac Surgery
Stroke, 36(9), 1854โ1858.
2005 journal article
Measures of human population structure show heterogeneity among genomic regions
Genome Research, 15(11), 1468โ1476.
2005 journal article
Measures of human population structure show heterogeneity among genomic regions
Genome Res, 15(11), 1468โ1476.
2004 journal article
Effect of Two- and Three-Locus Linkage Disequilibrium on the Power to Detect Marker/Phenotype Associations
Genetics, 168(2), 1029โ1040.
2004 conference paper
Multi-locus Linkage Disequilibrium and Haplotype-Based Tests of Association
Computational Methods for SNPs and Haplotype Inference, 139โ139.
Event: DIMACS/RECOMB Satellite Workshop at Piscataway, New Jersey, USA on November 21-22, 2002
2004 journal article
The Splicing Graph โ A Tool for Visualising Gene Structure and Alternative Splicing
Future Drug Discovery, 62โ65.
2001 journal article
Applying Data Mining Techniques to the Mapping of Complex Disease Genes
Genetic Epidemiology, 21(S1), S435โS440.
2001 journal article
Association Studies under General Disease Models
Theoretical Population Biology, 60(3), 253โ263.
2001 journal article
Association mapping: where weโve been, where weโre going
Expert Review of Molecular Diagnostics, 1(3), 334โ342.
2001 journal article
Dwarf8 polymorphisms associate with variation in flowering time
Nature Genetics, 28(3), 286โ289.
2001 journal article
Evolution of the Simulated Data Problem
Genetic Epidemiology, 21(S1), S325โS331.
2001 journal article
GAW12: Simulated Genome Scan, Sequence, and Family Data for a Common Disease
Genetic Epidemiology, 21(S1), S332โS338.
1999 journal article
A classical setting for associations between markers and loci affecting quantitative traits
Genetical Research, 74(3), 271โ277.
1999 journal article
Localization of the locus causing Spider Lamb Syndrome to the distal end of ovine Chromosome 6
Mammalian Genome, 10(1), 35โ38.
1999 journal article
Novel tests for marker-disease association using the collaborative study on the genetics of alcoholism data
Genetic Epidemiology, 17(S1), S265โS270.
1998 journal article
Detecting Marker-Disease Association by Testing for Hardy-Weinberg Disequilibrium at a Marker Locus
The American Journal of Human Genetics, 63(5), 1531โ1540.
1996 journal article
Polar Overdominance at the Ovine callipyge Locus
Science, 273(5272), 236โ238.
1995 journal article
Mapping Quantitative Trait Loci Controlling Milk Production in Dairy Cattle by Exploiting Progeny Testing
Genetics, 139(2), 907โ920.
1994 journal article
Chromosomal localization of the callipyge gene in sheep (Ovis aries) using bovine DNA markers.
Proceedings of the National Academy of Sciences, 91(8), 3019โ3023.
1993 journal article
Microsatellite mapping of a gene affecting horn development in Bos taurus
Nature Genetics, 4(2), 206โ210.
1993 journal article
Microsatellite mapping of the gene causing weaver disease in cattle will allow the study of an associated quantitative trait locus.
Proceedings of the National Academy of Sciences, 90(3), 1058โ1062.