Dilip Panthee

PyBSASeq: a simple and effective algorithm for bulked segregant analysis with whole-genome sequencing data

BMC BIOINFORMATICS, 21(1).

Transcriptome-Based Analysis of Tomato Genotypes Resistant to Bacterial Spot (Xanthomonas perforans) Race T4

International Journal of Molecular Sciences.

Phenotypic and Genetic Diversity of Xanthomonas perforans Populations from Tomato in North Carolina

PHYTOPATHOLOGY, 109(9), 1533–1543.

Diversity among modern tomato genotypes at different levels in fresh-market breeding

International Journal of Agronomy.

Filter paper-based spin column method for cost-efficient DNA or RNA purification

PLOS ONE, 13(12).

Heritability of Flower Number and Fruit Set under Heat Stress in Tomato

HortScience, 53(9), 1294–1299.

Integrating grafting and emerging products to manage soilborne diseases of tomato

V INTERNATIONAL SYMPOSIUM ON TOMATO DISEASES: PERSPECTIVES AND FUTURE DIRECTIONS IN TOMATO PROTECTION, pp. 249–254.

A novel plant DNA extraction method using filter paper-based 96-well spin plate

Planta, 246(3), 579–584.

Current Status of Early Blight Resistance in Tomato: An Update

International Journal of Molecular Sciences, 18(10), 2019.

Mapping Quantitative Trait Loci (QTL) for Resistance to Late Blight in Tomato

International Journal of Molecular Sciences, 18(7), 1589.

Mapping quantitative trait loci (QTL) for resistance to late blight in tomato

International Journal of Molecular Sciences, 18(7).

Resistance to Xanthomonas perforans race T4 causing bacterial spot in tomato breeding lines

Plant Pathology, 66(7), 1103–1109.

Differential response of tomato genotypes to Xanthomonas-specific pathogen-associated molecular patterns and correlation with bacterial spot (Xanthomonas perforans) resistance

Horticulture Research, 3.

Diversity analysis of tomato genotypes based on morphological traits with commercial breeding significance for fresh market production in eastern USA

Australian Journal of Crop Science, 10(8), 1098–1103.

Genetic diversity, cytogenetics, and biomass yields among taxa of giant reeds (Arundo species)

Journal of the American Society for Horticultural Science, 141(3), 256–263.

Diallel Analysis for Lycopene Content in the Hybrids Derived from Different Colored Parents in Tomato

American Journal of Plant Sciences, 06(09), 1483–1492.

Differential expression analysis of a select list of genes in susceptible and resistant heirloom tomatoes with respect to Pseudomonas syringae pv. tomato

European Journal of Plant Pathology, 142(4), 653–663.

Molecular Markers Associated with Ph-3 Gene Conferring Late Blight Resistance in Tomato

American Journal of Plant Sciences, 06(13), 2144–2150.

Molecular Markers for Septoria Leaf Spot (Septoria lycopersicii Speg.) Resistance in Tomato (Solanum lycopersicum L.)

Nepal Journal of Biotechnology, 3(1), 40–47.

Progeny of Selfed Plants from Tomato Breeding Line ‘NC1 Grape’ Overexpressing Mannitol Dehydrogenase (MTD) Have Increased Resistance to the Early Blight Fungus, Alternaria solani

Plant Health Progress, 16(3), 115–117.

Tomato Plants Overexpressing a Celery Mannitol Dehydrogenase (MTD) Have Decreased Susceptibility to Botrytis cinerea

American Journal of Plant Sciences, 06(08), 1116–1125.

'Mountain Lion': A large-fruited, extended shelf-life hybrid tomato and its parent line, NC 2rinEC

HortScience, 49(11), 1461–1462.

'Mountain Rouge': A pink-fruited, heirloom-type hybrid tomato and its parent line NC 161L

HortScience, 49(11), 1463–1464.

Natural variation for responsiveness to flg22, flgII-28, and csp22 and Pseudomonas syringae pv. tomato in heirloom tomatoes

PLoS One, 9(9).

'Mountain Honey' hybrid grape tomato and its parent NC 6 Grape breeding line

HortScience, 48(9), 1192–1194.

'Mountain Vineyard' hybrid grape tomato and its parents: NC 4 Grape and NC 5 Grape tomato breeding lines

HortScience, 48(9), 1189–1191.

A reexamination of molecular markers for use in marker-assisted breeding in tomato (Retraction of vol 184, pg 165, 2012)

Euphytica, Vol. 194, pp. 149–149.

Evaluation of tomato accessions for flavour and flavour-contributing components

Plant Genetic Resources: Characterization and Utilization, 11(2), 106–113.

First report of potato spindle tuber viroid naturally infecting greenhouse tomatoes in North Carolina

Plant Disease, 97(1), 148–149.

Genotype and environmental interaction for fruit quality traits in vintage tomato varieties

Euphytica, 193(2), 169–182.

Lycopene Estimation in Tomato Lines Using Infrared Absorbance and Tomato Analyzer

International Journal of Vegetable Science, 19(3), 240–255.

New molecular markers associated with the Sw-5 gene conferring resistance to Tomato spotted wilt virus in tomato

Journal of Horticultural Science & Biotechnology, 88(2), 129–134.

Novel molecular marker associated with Tm2(a) gene conferring resistance to tomato mosaic virus in tomato

Plant Breeding, 132(4), 413–416.

RAPD Markers Linked to Late Blight Resistance in Tomato

Nepal Journal of Science and Technology, 14(1), 1–14.

Retraction Note to: A reexamination of molecular markers for use in marker-assisted breeding in tomato

Euphytica, 194(1), 149–149.

'Mountain Magic': An early blight and late blight-resistant specialty type F-1 hybrid tomato

HortScience, 47(2), 299–300.

A reexamination of molecular markers for use in marker-assisted breeding in tomato

Euphytica, 184(2), 165–179.

Diversity Analysis of Tomato Cultivars Based on Coefficient of Parentage and RAPD Molecular Markers

Journal of Crop Improvement, 26(2), 177–196.

High-density SNP genotyping of tomato (Solanum lycopersicum L.) reveals patterns of genetic variation due to breeding

PLoS One, 7(9).

Magnitude of genotype x environment interactions affecting tomato fruit quality

HortScience, 47(6), 721–726.

Marker-assisted selection in tomato breeding

Critical Reviews in Plant Sciences, Vol. 31, pp. 93–123.

Tomato spotted wilt virus-resistant fresh-market tomato breeding lines: NC 58S, NC 123S, NC 127S, and NC 132S

HortScience, 47(4), 531–532.

'Mountain Majesty': A tomato spotted wilt virus-resistant fresh-market hybrid tomato and Its parents NC 714 and NC 1CS

HortScience, 46(9), 1321–1323.

Diversity Analysis of Arabidopsis thaliana (L.) Heynh Ecotypes for Glucosinolates in Shoots and Seeds

HortScience, 46(7), 968–974.

GGE Biplot Analysis of Tomato F1Hybrids Evaluated Across Years for Marketable Fruit Yield

Journal of Crop Improvement, 25(5), 488–496.

Genetic Improvement of Fresh Market Tomatoes for Yield and Fruit Quality Over 35 Years in North Carolina: A Review

International Journal of Vegetable Science, 17(3), 259–273.

Identification of molecular markers for Sw-5 gene of tomato spotted wilt virus resistance

American Journal of Biotechnology and Molecular Sciences, 1, 8–16.

Information Theory and Multivariate Techniques for Analyzing DNA Sequence Data: An Example from Tomato Genes

Nepal Journal of Biotechnology, 1(1), 1–9.

Molecular Markers for Tm-2 Alleles of Tomato Mosaic Virus Resistance in Tomato

American Journal of Plant Sciences, 02(02), 180–189.

Selenium Regulates Gene Expression for Glucosinolate and Carotenoid Biosynthesis in Arabidopsis

Journal of the American Society for Horticultural Science, 136(1), 23–34.

'Mountain Merit': A late blight-resistant large-fruited tomato hybrid

HortScience, 45(10), 1547–1548.

'Plum Regal' fresh-market plum tomato hybrid and Its parents, NC 25P and NC 30P

HortScience, 45(5), 824–825.

Genomics of fungal disease resistance in tomato

Current Genomics, 11(1), 30–39.

Grape tomato breeding lines: NC 1 Grape, NC 2 Grape, and NC 3 Grape

HortScience, 45(12), 1887–1888.

Marker-assisted selection for coupling phase resistance to tomato spotted wilt virus and phytophthora infestans (late blight) in tomato

HortScience, 45(10), 1424–1428.

NC 1 CELBR and NC 2 CELBR: Early blight and late blight-resistant fresh market tomato breeding lines

HortScience, 45(6), 975–976.

Plant volatiles-based insect pest management in organic farming

Critical Reviews in Plant Sciences, Vol. 29, pp. 123–133.

Differential expression of genes in soybean in response to the causal agent of Asian soybean rust (Phakopsora pachyrhizi Sydow) is soybean growth stage-specific

Theoretical and Applied Genetics, 118(2), 359–370.

Permanent Genetic Resources added to Molecular Ecology Resources database 1 January 2009-30 April 2009

Molecular Ecology Resources, 9(5), 1375–1379.

Assessing Glycinin (11S) and β-Conglycinin (7S) Fractions of Soybean Storage Protein by Near-Infrared Spectroscopy

Journal of the American Oil Chemists' Society, 84(12), 1107–1115.

Gene expression analysis in soybean in response to the causal agent of Asian soybean rust (Phakopsora pachyrhizi Sydow) in an early growth stage

Functional & Integrative Genomics, 7(4), 291–301.

Quantitative trait loci for agronomic traits in soybean

Plant Breeding, 126(1), 51–57.

Diversity Analysis of Garlic (Allium sativum L.) Germplasms Available in Nepal Based on Morphological Characters

Genetic Resources and Crop Evolution, 53(1), 205–212.

Genomic Regions Associated with Amino Acid Composition in Soybean

Molecular Breeding, 17(1), 79–89.

Modifier QTL for fatty acid composition in soybean oil

Euphytica, 152(1), 67–73.

Registration of Soybean Germplasm Lines TN03–350 and TN04–5321 with Improved Protein Concentration and Quality

Crop Science, 46(5), 2328.

Quantitative Trait Loci for Seed Protein and Oil Concentration, and Seed Size in Soybean

Crop Science, 45(5), 2015.

Quantitative trait loci controlling sulfur containing amino acids, methionine and cysteine, in soybean seeds

Theoretical and Applied Genetics, 112(3), 546–553.

Genomic regions governing soybean seed nitrogen accumulation

Journal of the American Oil Chemists' Society, 81(1), 77–81.

Quantitative trait loci for β-conglycinin (7S) and glycinin (11S) fractions of soybean storage protein

Journal of the American Oil Chemists' Society, 81(11), 1005–1012.

Expression and Inheritance of a Transgene for Salinity Tolerance in Tomato

Journal of the Institute of Agriculture and Animal Science, (24), 43–50.

Studies on seed dormancy of broad leaf mustard and garden cress

Nepalese Horticulture, 3, 30–35.

Effect of genotype, medium and explant on callus production and in vitro regeneration of tomato (Lycopersicon esculentum Mill.)

Nepal Agriculture Research Journal, 2, 20–26.

Evaluating the performance of tomato (Lycopersicon esculentum Mill.) cultivars for genetic transformation

Nepal Agriculture Research Journal, 2, 48–54.

Storage life of onion seeds in relation to the methods of threshing and cleaning, and drying period

Nepalese Horticulture, 2, 31–36.

Efficacy of six different indigenous pesticides for wheat seed storage

Journal of Institute of Agriculture and Animal Sciences, 17-18, 69–74.

Identification of a suitable indigenous storage structures for wheat seed storage

Journal of Institute of Agriculture and Animal Sciences, 17-18, 54–62.