Works (171)
Updated: November 20th, 2023 08:02
2023 article
Aggregated Molecular Phenotype Scores: Enhancing Assessment and Visualization of Mass Spectrometry Imaging Data for Tissue-Based Diagnostics
Chappel, J. R., King, M. E., Fleming, J., Eberlin, L. S., Reif, D. M., & Baker, E. S. (2023, August 14). ANALYTICAL CHEMISTRY, Vol. 8.
co-author countries:
United States of America πΊπΈ
Sources: Web Of Science, ORCID
Added: August 28, 2023
2023 article
Bile salt hydrolases shape the bile acid landscape and restrict Clostridioides difficile growth in the murine gut
Foley, M. H., Walker, M. E., Stewart, A. K., O'Flaherty, S., Gentry, E. C., Patel, S., β¦ Theriot, C. M. (2023, March 13). NATURE MICROBIOLOGY, Vol. 3.
co-author countries:
United States of America πΊπΈ
MeSH headings : Animals; Mice; Humans; Clostridioides difficile; Clostridioides; Bile Acids and Salts; Amidohydrolases; Clostridium Infections
www.nature.com (publisher PDF)
Sources: Web Of Science, ORCID
Added: April 4, 2023
2023 journal article
Integrative Chemical-Biological Grouping of Complex High Production Volume Substances from Lower Olefin Manufacturing Streams
TOXICS, 11(7).
co-author countries:
United States of America πΊπΈ
author keywords: UVCB; petroleum; regulatory risk assessment; read-across; ion mobility spectrometry
Sources: ORCID, Web Of Science
Added: July 6, 2023
2023 journal article
Using Multidimensional Separations to Distinguish Isomeric Amino Acid-Bile Acid Conjugates and Assess Their Presence and Perturbations in Model Systems
ANALYTICAL CHEMISTRY, 95(41), 15357β15366.
co-author countries:
United States of America πΊπΈ
Source: Web Of Science
Added: October 30, 2023
2022 article
A High-Throughput Ion Mobility Spectrometry-Mass Spectrometry Screening Method for Opioid Profiling
Butler, K. E., & Baker, E. S. (2022, September 22). JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, Vol. 9.
co-author countries:
United States of America πΊπΈ
MeSH headings : Analgesics, Opioid; High-Throughput Screening Assays; Humans; Ion Mobility Spectrometry / methods; Mass Spectrometry / methods; Solid Phase Extraction
Sources: Web Of Science, ORCID
Added: October 3, 2022
2022 journal article
A Preprocessing Tool for Enhanced Ion Mobility-Mass Spectrometry-Based Omics Workflows
JOURNAL OF PROTEOME RESEARCH, 21(3), 798β807.
co-author countries:
United States of America πΊπΈ
author keywords: mass spectrometry; ion mobility spectrometry; preprocessing software; time-of-flight detector saturation; data-independent acquisition; lipid annotation
MeSH headings : Chromatography, Liquid / methods; Humans; Ion Mobility Spectrometry / methods; Ions; Lipids; Mass Spectrometry / methods; Workflow
Sources: Web Of Science, ORCID
Added: May 2, 2022
2022 journal article
Analysis of per- and polyfluoroalkyl substances in Houston Ship Channel and Galveston Bay following a large-scale industrial fire using ion-mobility-spectrometry-mass spectrometry
JOURNAL OF ENVIRONMENTAL SCIENCES, 115, 350β362.
co-author countries:
United States of America πΊπΈ
author keywords: Emergency; Environmental disaster; PFAS
MeSH headings : Animals; Bays; Chromatography, Liquid; Deer; Fluorocarbons / analysis; Ion Mobility Spectrometry; Tandem Mass Spectrometry; Water Pollutants, Chemical / analysis
Sources: Web Of Science, ORCID
Added: January 18, 2022
2022 article
Assessing the Fate of Dissolved Organic Compounds in Landfill Leachate and Wastewater Treatment Systems
Doyle, M. G., Odenkirk, M. T., Stewart, A. K., Nelson, J. P., Baker, E. S., & Cruz, F. (2022, November 1). ACS ES&T WATER, Vol. 11.
co-author countries:
United States of America πΊπΈ
author keywords: nontargeted analysis; anthropogenic chemicals; wastewater; landfill leachate; reverse osmosis
Sources: Web Of Science, ORCID
Added: November 2, 2022
2022 article
CCS Predictor 2.0: An Open-Source Jupyter Notebook Tool for Filtering Out False Positives in Metabolomics
Rainey, M. A., Watson, C. A., Asef, C. K., Foster, M. R., Baker, E. S., & Fernandez, F. M. (2022, December 6). ANALYTICAL CHEMISTRY, Vol. 12.
co-author countries:
United States of America πΊπΈ
MeSH headings : Metabolomics / methods; Mass Spectrometry / methods; Algorithms; Chromatography, High Pressure Liquid; Machine Learning
Sources: Web Of Science, ORCID
Added: January 3, 2023
2022 journal article
Characterization of compositional variability in petroleum substances
FUEL, 317.
co-author countries:
United States of America πΊπΈ
author keywords: UVCB; Registration; Variability; IMS-MS
Sources: Web Of Science, ORCID
Added: May 10, 2022
2022 article
Combining Isotopologue Workflows and Simultaneous Multidimensional Separations to Detect, Identify, and Validate Metabolites in Untargeted Analyses
Dodds, J. N., Wang, L., Patti, G. J., & Baker, E. S. (2022, January 28). ANALYTICAL CHEMISTRY, Vol. 1.
co-author countries:
United States of America πΊπΈ
MeSH headings : Chromatography, Liquid; Ion Mobility Spectrometry; Metabolomics / methods; Tandem Mass Spectrometry; Workflow
Sources: Web Of Science, ORCID
Added: March 14, 2022
2022 journal article
Cupric Ions Selectively Modulate TRAAK-Phosphatidylserine Interactions
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 144(16), 7048β7053.
co-author countries:
United States of America πΊπΈ
MeSH headings : Cations, Divalent / metabolism; Phosphatidylserines; Potassium Channels, Tandem Pore Domain / chemistry; Potassium Channels, Tandem Pore Domain / metabolism
Sources: Web Of Science, ORCID
Added: June 6, 2022
2022 article
Empowering women and addressing underrepresentation in the field of mass spectrometry
Rampler, E., Baker, E. S., Kirkwood, K. I., Schwaiger-Haber, M., Tam, M., Jones, M. A., & Sherman, M. (2022, February 16). EXPERT REVIEW OF PROTEOMICS, Vol. 2.
co-author countries:
Austria π¦πΉ United States of America πΊπΈ
author keywords: FeMS; ASMS; mass spectrometry; women; diversity
MeSH headings : Female; Humans; Mass Spectrometry; Power, Psychological
Sources: Web Of Science, ORCID
Added: March 7, 2022
2022 journal article
Evaluation of Metabolism of a Defined Pesticide Mixture through Multiple In Vitro Liver Models
TOXICS, 10(10).
co-author countries:
Japan π―π΅ United States of America πΊπΈ
author keywords: toxicokinetics; chemical mixtures; defined mixtures; human health risk assessment; nontargeted analyses; microphysiological systems
Sources: ORCID, Web Of Science
Added: October 2, 2022
2022 journal article
High-Resolution Demultiplexing (HRdm) Ion Mobility Spectrometry-Mass Spectrometry for Aspartic and Isoaspartic Acid Determination and Screening
ANALYTICAL CHEMISTRY, 94(16), 6191β6199.
co-author countries:
United States of America πΊπΈ
MeSH headings : Chromatography, Liquid; Ion Mobility Spectrometry / methods; Isoaspartic Acid / analysis; Mass Spectrometry / methods; Peptides
Sources: Web Of Science, ORCID
Added: May 23, 2022
2022 article
Impacts of Gestational FireMaster 550 (FM 550) Exposure on the Neonatal Cortex are Sex Specific and Largely Attributable to the Organophosphate Esters
Witchey, S. K., Doyle, M. G., Fredenburg, J. D., St Armour, G., Horman, B., Odenkirk, M. T., β¦ Patisaul, H. B. (2022, September 8). NEUROENDOCRINOLOGY, Vol. 9.
co-author countries:
United States of America πΊπΈ
Sources: Web Of Science, ORCID
Added: September 26, 2022
2022 article
Introducing the Lipidomics Minimal Reporting Checklist
McDonald, J. G., Ejsing, C. S., Kopczynski, D., Holcapek, M., Aoki, J., Arita, M., β¦ Ekroos, K. (2022, August 8). NATURE METABOLISM, Vol. 8.
co-author countries:
Austria π¦πΉ Australia π¦πΊ China π¨π³ Czechia π¨πΏ Germany π©πͺ Denmark π©π° France π«π· United Kingdom of Great Britain and Northern Ireland π¬π§ Japan π―π΅ Singapore πΈπ¬ United States of America πΊπΈ
MeSH headings : Checklist; Lipid Metabolism; Lipidomics; Mass Spectrometry
Sources: Web Of Science, ORCID
Added: August 22, 2022
2022 article
Stability and Dissociation of Adeno-Associated Viral Capsids by Variable Temperature-Charge Detection-Mass Spectrometry
Kostelic, M. M., Ryan, J. P., Brown, L. S., Jackson, T. W., Hsieh, C.-C., Zak, C. K., β¦ Marty, M. T. (2022, August 18). ANALYTICAL CHEMISTRY, Vol. 8.
co-author countries:
United States of America πΊπΈ
MeSH headings : Capsid / chemistry; Capsid Proteins / chemistry; Dependovirus / chemistry; Mass Spectrometry; Temperature
Sources: Web Of Science, ORCID
Added: September 12, 2022
2022 journal article
Surface Modified Nano-Electrospray Needles Improve Sensitivity for Native Mass Spectrometry
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 33(6), 1031β1037.
co-author countries:
United States of America πΊπΈ
author keywords: native mass spectrometry; charge detection mass spectrometry; electrospray ionization; silane chemistry
MeSH headings : Needles; Proteins / analysis; Spectrometry, Mass, Electrospray Ionization / methods
Sources: Web Of Science, ORCID
Added: June 20, 2022
2022 journal article
Temporal chemical composition changes in water below a crude oil slick irradiated with natural sunlight
MARINE POLLUTION BULLETIN, 185.
co-author countries:
United States of America πΊπΈ
author keywords: Oil; Photodegradation; Photooxidation; Petroleomics; Toxicity; Spill
MeSH headings : Petroleum; Sunlight; Water; Petroleum Pollution; Seawater
Sources: Web Of Science, ORCID
Added: February 20, 2023
2022 journal article
Uncovering PFAS and Other Xenobiotics in the Dark Metabolome Using Ion Mobility Spectrometry, Mass Defect Analysis, and Machine Learning
ENVIRONMENTAL SCIENCE & TECHNOLOGY, 56(12), 9133β9143.
co-author countries:
United States of America πΊπΈ
author keywords: xenobiotics; per- and polyfluoroalkyl substances; ion mobility spectrometry; mass spectrometry; mass defect; machine learning; PFAS
MeSH headings : Fluorocarbons; Humans; Ion Mobility Spectrometry / methods; Machine Learning; Metabolome; Xenobiotics
Sources: Web Of Science, ORCID
Added: July 5, 2022
2022 journal article
Utilizing Pine Needles to Temporally and Spatially Profile Per- and Polyfluoroalkyl Substances (PFAS)
ENVIRONMENTAL SCIENCE & TECHNOLOGY, 56(6), 3441β3451.
co-author countries:
United States of America πΊπΈ
author keywords: Biomonitoring; contamination; per- and polyfluoroalkyl substances; fluoroethers; ion mobility; mass spectrometry; PFAS
MeSH headings : Alkanesulfonic Acids / analysis; Chromatography, Liquid; Fluorocarbons / analysis; United States; United States Environmental Protection Agency
Sources: Web Of Science, ORCID
Added: February 18, 2022
2022 article
Utilizing Skyline to analyze lipidomics data containing liquid chromatography, ion mobility spectrometry and mass spectrometry dimensions
Kirkwood, K. I., Pratt, B. S., Shulman, N., Tamura, K., MacCoss, M. J., MacLean, B. X., & Baker, E. S. (2022, July 13). NATURE PROTOCOLS, Vol. 7.
co-author countries:
United States of America πΊπΈ
MeSH headings : Ion Mobility Spectrometry; Lipidomics; Chromatography, Liquid / methods; Mass Spectrometry / methods; Lipids
Sources: Web Of Science, ORCID
Added: July 26, 2022
2021 journal article
A Comparative Analysis of Analytical Techniques for Rapid Oil Spill Identification
ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY, 40(4), 1034β1049.
co-author countries:
United States of America πΊπΈ
author keywords: Ion mobility spectrometry– mass spectrometry; Fingerprinting; Petroleum
MeSH headings : Gas Chromatography-Mass Spectrometry; Gasoline; Hydrocarbons; Petroleum / analysis; Petroleum Pollution / analysis
Sources: Web Of Science, ORCID
Added: April 5, 2021
2021 journal article
Data Processing Workflow to Identify Structurally Related Compounds in Petroleum Substances Using Ion Mobility Spectrometry-Mass Spectrometry
ENERGY & FUELS, 35(13), 10529β10539.
co-author countries:
United States of America πΊπΈ
Sources: Web Of Science, ORCID
Added: July 26, 2021
2021 article
Development and Application of Multidimensional Lipid Libraries to Investigate Lipidomic Dysregulation Related to Smoke Inhalation Injury Severity
Kirkwood, K. I., Christopher, M. W., Burgess, J. L., Littau, S. R., Foster, K., Richey, K., β¦ Baker, E. S. (2021, December 7). JOURNAL OF PROTEOME RESEARCH, Vol. 12.
co-author countries:
United States of America πΊπΈ
author keywords: lipidomics; ion mobility spectrometry; spectral libraries; data annotation; smoke inhalation
MeSH headings : Chromatography, Liquid; Humans; Ion Mobility Spectrometry; Lipidomics; Lipids; Smoke Inhalation Injury
Sources: Web Of Science, ORCID
Added: December 20, 2021
2021 review
From Pesticides to Per- and Polyfluoroalkyl Substances: An Evaluation of Recent Targeted and Untargeted Mass Spectrometry Methods for Xenobiotics
[Review of ]. ANALYTICAL CHEMISTRY, 93(1), 641β656.
co-author countries:
United States of America πΊπΈ
MeSH headings : Fluorocarbons / analysis; Mass Spectrometry; Xenobiotics / analysis
Sources: Web Of Science, ORCID
Added: February 4, 2021
2021 journal article
From Plants to Ants: Fungal Modification of Leaf Lipids for Nutrition and Communication in the Leaf-Cutter Ant Fungal Garden Ecosystem
MSYSTEMS, 6(2).
co-author countries:
United States of America πΊπΈ
author keywords: 18:2; 18:3; alpha-linolenic acid; fungal garden ecosystem; interkingdom communication; leaf-cutter ants; lignocellulose degradation; linoleic acid; lipidomics; mass spectrometry
Sources: ORCID, Web Of Science
Added: April 28, 2021
2021 journal article
From Prevention to Disease Perturbations: A Multi-Omic Assessment of Exercise and Myocardial Infarctions
BIOMOLECULES, 11(1).
co-author countries:
United States of America πΊπΈ
author keywords: lipidomics; metabolomics; multi-omics; planned myocardial infarction (PMI); myocardial infarction (MI); exercise; heart; cheminformatics
MeSH headings : Exercise; Exercise Test; Female; Humans; Lipidomics; Lipids / blood; Lipids / genetics; Male; Metabolomics; Middle Aged; Myocardial Infarction / blood; Myocardial Infarction / genetics; Myocardial Infarction / physiopathology; Myocardial Infarction / prevention & control; Risk Factors
Sources: Web Of Science, ORCID
Added: January 4, 2021
2021 journal article
Improving the Speed and Selectivity of Newborn Screening Using Ion Mobility Spectrometry-Mass Spectrometry
ANALYTICAL CHEMISTRY, 93(51), 17094β17102.
co-author countries:
United States of America πΊπΈ
MeSH headings : Biomarkers; High-Throughput Screening Assays; Humans; Infant, Newborn; Ion Mobility Spectrometry; Mass Spectrometry; Neonatal Screening
Sources: Web Of Science, ORCID
Added: February 7, 2022
2021 journal article
In situ imaging reveals disparity between prostaglandin localization and abundance of prostaglandin synthases
COMMUNICATIONS BIOLOGY, 4(1).
co-author countries:
Sweden πΈπͺ United States of America πΊπΈ
MeSH headings : Animals; Cyclooxygenase 1 / genetics; Cyclooxygenase 1 / metabolism; Cyclooxygenase 2 / genetics; Cyclooxygenase 2 / metabolism; Embryo, Mammalian; Mass Spectrometry; Mice; Prostaglandin-Endoperoxide Synthases / metabolism; Prostaglandins / metabolism
Sources: Web Of Science, ORCID
Added: August 30, 2021
2021 journal article
Ion Mobility Spectrometry Characterization of the Intermediate Hydrogen-Containing Gold Cluster Au-7(PPh3)(7)H-5(2+)
JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 12(10), 2502β2508.
co-author countries:
United States of America πΊπΈ
Sources: Web Of Science, ORCID
Added: April 5, 2021
2021 journal article
Multiomic Big Data Analysis Challenges: Increasing Confidence in the Interpretation of Artificial Intelligence Assessments
ANALYTICAL CHEMISTRY, 93(22), 7763β7773.
co-author countries:
United States of America πΊπΈ
MeSH headings : Artificial Intelligence; Big Data; Data Analysis
Sources: Web Of Science, ORCID
Added: July 19, 2021
2021 article
Per- and polyfluoroalkyl substances (PFAS)-contaminants of emerging concern
Baker, E. S., & Knappe, D. R. U. (2021, December 2). ANALYTICAL AND BIOANALYTICAL CHEMISTRY, Vol. 12.
co-author countries:
United States of America πΊπΈ
MeSH headings : Anthropogenic Effects; Environmental Pollutants / analysis; Environmental Pollutants / pharmacokinetics; Fluorocarbons / analysis; Fluorocarbons / pharmacokinetics; Humans; Tissue Distribution; United States; United States Environmental Protection Agency
Sources: Web Of Science, ORCID
Added: December 13, 2021
2021 review
Recommendations for good practice in MS-based lipidomics
[Review of ]. JOURNAL OF LIPID RESEARCH, 62.
co-author countries:
Austria π¦πΉ Czechia π¨πΏ Germany π©πͺ Singapore πΈπ¬ United States of America πΊπΈ
author keywords: lipidomics; metabolomics; MS; chromatography; ion mobility spectrometry; phospholipids; sphingolipids; LC-MS; lipid identification
MeSH headings : Humans; Lipidomics / standards; Lipids / analysis; Mass Spectrometry
Sources: Web Of Science, ORCID
Added: February 7, 2022
2021 journal article
Relationships between constituents of energy drinks and beating parameters in human induced pluripotent stem cell (iPSC)-Derived cardiomyocytes
FOOD AND CHEMICAL TOXICOLOGY, 149.
co-author countries:
United States of America πΊπΈ
author keywords: Cardiovascular; Heart rate; QT interval; Theophylline; Adenine; Azelate
MeSH headings : Calcium / metabolism; Cell Differentiation; Cell Survival / drug effects; Drug-Related Side Effects and Adverse Reactions; Energy Drinks / analysis; Heart Diseases / chemically induced; Humans; Induced Pluripotent Stem Cells / drug effects; Myocytes, Cardiac / drug effects; Risk Assessment
Sources: ORCID, Web Of Science
Added: February 4, 2021
2021 journal article
Spatial Distribution of Polycyclic Aromatic Hydrocarbon Contaminants after Hurricane Harvey in a Houston Neighborhood.
Journal of Health & Pollution.
Source: ORCID
Added: April 28, 2021
2021 journal article
Utilizing Ion Mobility-Mass Spectrometry to Investigate the Unfolding Pathway of Cu/Zn Superoxide Dismutase
FRONTIERS IN CHEMISTRY, 9.
co-author countries:
United States of America πΊπΈ
author keywords: ion mobility spectrometry; native mass spectrometry; superoxide dismutase; SOD1; drift tube ion mobility spectrometry; trapped ion mobility spectrometry
Sources: Web Of Science, ORCID
Added: March 15, 2021
2021 article
Utilizing ion mobility spectrometry-mass spectrometry for the characterization and detection of persistent organic pollutants and their metabolites
Aly, N. A., Dodds, J. N., Luo, Y.-S., Grimm, F. A., Foster, M. K., Rusyn, I., & Baker, E. S. (2021, October 20). ANALYTICAL AND BIOANALYTICAL CHEMISTRY, Vol. 10.
co-author countries:
Taiwan, Province of China πΉπΌ United States of America πΊπΈ
author keywords: Ion Mobility Spectrometry; Pesticides; Pharmaceuticals; PFAS
MeSH headings : Environmental Monitoring / methods; Humans; Ion Mobility Spectrometry / methods; Mass Spectrometry / methods; Persistent Organic Pollutants / chemistry; Persistent Organic Pollutants / metabolism; Pesticides / analysis; Pesticides / metabolism; Pharmaceutical Preparations / analysis; Pharmaceutical Preparations / metabolism; Polychlorinated Biphenyls / analysis; Polychlorinated Biphenyls / metabolism
Sources: Web Of Science, ORCID
Added: November 1, 2021
2021 article
Utilizing liquid chromatography, ion mobility spectrometry, and mass spectrometry to assess INLIGHT (TM) derivatized N-linked glycans in biological samples
Butler, K. E., Kalmar, J. G., Muddiman, D. C., & Baker, E. S. (2021, August 4). ANALYTICAL AND BIOANALYTICAL CHEMISTRY, Vol. 8.
co-author countries:
United States of America πΊπΈ
author keywords: Glycomics; Ion mobility spectrometry; INLIGHT (TM); N-Linked glycans; LC-IMS-MS
Sources: Web Of Science, ORCID
Added: August 16, 2021
2020 journal article
Coupling IR-MALDESI with Drift Tube Ion Mobility-Mass Spectrometry for High-Throughput Screening and Imaging Applications
Journal of the American Society for Mass Spectrometry, 31(3), 642β650.
co-author countries:
United States of America πΊπΈ
author keywords: mass spectrometry imaging; ion mobility spectrometry; IR-MALDESI; high-throughput; isomer resolution
Sources: ORCID, Web Of Science, Crossref
Added: March 23, 2020
2020 journal article
Enhanced protocol for quantitativeN-linked glycomics analysis using Individuality Normalization when Labeling with Isotopic Glycan Hydrazide Tags (INLIGHT)(TM)
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 412(27), 7569β7579.
co-author countries:
United States of America πΊπΈ
author keywords: Glycomics; Orbitrap; Sample preparation; INLIGHT (TM); N-linked glycans; HILIC; PGC; Reversed-phase; Chromatography
MeSH headings : Chromatography, Reverse-Phase / methods; Female; Fetuins / chemistry; Glycomics / methods; Glycosylation; Humans; Male; Peptide-N4-(N-acetyl-beta-glucosaminyl) Asparagine Amidase / chemistry; Polysaccharides / analysis; Tandem Mass Spectrometry / methods
Sources: Web Of Science, ORCID
Added: September 14, 2020
2020 journal article
Metabolite collision cross section prediction without energy-minimized structures
The Analyst, 145(16), 5414β5418.
co-author countries:
United States of America πΊπΈ
MeSH headings : Ion Mobility Spectrometry; Mass Spectrometry
Sources: Web Of Science, ORCID
Added: August 31, 2020
2020 journal article
Proteomic assessment of serum biomarkers of longevity in older men
AGING CELL, 19(11).
co-author countries:
United States of America πΊπΈ
author keywords: aging; biomarker; inflammation; longevity; men; proteomics
MeSH headings : Aged; Biomarkers / blood; Humans; Longevity; Male; Proteomics / methods
Sources: Web Of Science, ORCID
Added: November 2, 2020
2020 journal article
Rapid Characterization of Emerging Per- and Polyfluoroalkyl Substances in Aqueous Film-Forming Foams Using Ion Mobility Spectrometry-Mass Spectrometry
ENVIRONMENTAL SCIENCE & TECHNOLOGY, 54(23), 15024β15034.
co-author countries:
United States of America πΊπΈ
MeSH headings : Fluorocarbons / analysis; Ion Mobility Spectrometry; Tandem Mass Spectrometry; Water; Water Pollutants, Chemical / analysis
Sources: Web Of Science, ORCID
Added: January 19, 2021
2020 journal article
Rapid Characterization of Per- and Polyfluoroalkyl Substances (PFAS) by Ion Mobility Spectrometry-Mass Spectrometry (IMS-MS)
Analytical Chemistry, 92(6), 4427β4435.
co-author countries:
United States of America πΊπΈ
MeSH headings : Hydrocarbons, Fluorinated / analysis; Ion Mobility Spectrometry; Mass Spectrometry; Molecular Structure; Polymers / analysis
Sources: ORCID, Web Of Science
Added: March 23, 2020
2020 journal article
Structural-based connectivity and omic phenotype evaluations (SCOPE): a cheminformatics toolbox for investigating lipidomic changes in complex systems
ANALYST, 145(22), 7197β7209.
co-author countries:
Japan π―π΅ United States of America πΊπΈ
MeSH headings : Cheminformatics; Lipidomics; Lipids; Mass Spectrometry; Phenotype
Sources: Web Of Science, ORCID
Added: November 24, 2020
2020 journal article
Temporal and spatial analysis of per and polyfluoroalkyl substances in surface waters of Houston ship channel following a large-scale industrial fire incident
Environmental Pollution, 265(B), 115009.
co-author countries:
United States of America πΊπΈ
MeSH headings : Drinking Water / analysis; Fires; Fluorocarbons / analysis; Texas; Water Pollutants, Chemical / analysis
Sources: Web Of Science, ORCID
Added: August 31, 2020
2020 journal article
Unveiling molecular signatures of preeclampsia and gestational diabetes mellitus with multi-omics and innovative cheminformatics visualization tools
MOLECULAR OMICS, 16(6).
co-author countries:
Japan π―π΅ United States of America πΊπΈ
MeSH headings : Case-Control Studies; Diabetes, Gestational / genetics; Female; Genomics; Humans; Lipidomics; Metabolic Networks and Pathways; Pre-Eclampsia / genetics; Pregnancy
Sources: Web Of Science, ORCID
Added: January 4, 2021
2020 article
Utilizing Drift Tube Ion Mobility Spectrometry for the Evaluation of Metabolites and Xenobiotics
ION MOBILITY-MASS SPECTROMETRY: METHODS AND PROTOCOLS, Vol. 2084, pp. 35β54.
co-author countries:
United States of America πΊπΈ
Contributors: M. Odenkirk n & nβ
author keywords: Ion mobility spectrometry (IMS); Drift tube ion mobility spectrometry (DTIMS); Metabolomics; Exposomics; Collision cross section (CCS)
MeSH headings : Ion Mobility Spectrometry / methods; Metabolome; Metabolomics / methods; Xenobiotics / analysis
Sources: ORCID, Web Of Science
Added: December 5, 2019
2019 article
Challenges in Identifying the Dark Molecules of Life
ANNUAL REVIEW OF ANALYTICAL CHEMISTRY, VOL 12, Vol. 12, pp. 177β199.
co-author countries:
Argentina π¦π· United States of America πΊπΈ
Contributors: M. Mongeβ*, J. Dodds n, nβ, A. Edison* & F. Fernaacutendez
author keywords: metabolomics; metabolite identification; chromatography; ion mobility; tandem mass spectrometry; nuclear magnetic resonance spectroscopy
MeSH headings : Animals; Chromatography, Liquid / methods; Humans; Ion Mobility Spectrometry / methods; Magnetic Resonance Spectroscopy / methods; Mass Spectrometry / methods; Metabolome; Metabolomics / methods
Sources: Web Of Science, ORCID
Added: July 1, 2019
2019 journal article
Evaluating the structural complexity of isomeric bile acids with ion mobility spectrometry
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 411(19), 4673β4682.
co-author countries:
United States of America πΊπΈ
Contributors: X. Zhengβ*, F. Smith*, N. Aly*, J. Caiβ*, R. Smithβ*, A. Pattersonβ*, nβ
author keywords: Ion mobility spectrometry; Bile acids; Collisional cross sections
MeSH headings : Bile Acids and Salts / chemistry; Bile Acids and Salts / standards; Copper / chemistry; Humans; Ion Mobility Spectrometry / methods; Isomerism; Molecular Structure; Reference Standards; Zinc / chemistry
Sources: Web Of Science, ORCID
Added: July 29, 2019
2019 journal article
Folding and Assembly of Short Ξ±, Ξ², Γ-Hybrid Peptides: Minor Variations in Sequence and Drastic Differences in Higher-Level Structures
Journal of the American Chemical Society, 141(36), 14239β14248.
co-author countries:
China π¨π³ Singapore πΈπ¬ United States of America πΊπΈ
Contributors: Y. Zhangβ*, Y. Zhongβ*, A. Connor*, D. Millerβ*, R. Cao*, J. Shenβ*, B. Songβ*, *β
MeSH headings : Crystallography, X-Ray; Hydrogen Bonding; Models, Molecular; Peptides / chemistry; Protein Folding; Protein Structure, Secondary
Source: ORCID
Added: December 5, 2019
2019 journal article
Ion Mobility Spectrometry: Fundamental Concepts, Instrumentation, Applications, and the Road Ahead
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 30(11), 2185β2195.
co-author countries:
United States of America πΊπΈ
Contributors: J. Dodds n & nβ
author keywords: Ion mobility spectrometry; IMS; Untargeted metabolomics; Mass spectrometry
Sources: Web Of Science, ORCID
Added: November 25, 2019
2019 book
Ion Mobility-Mass Spectrometry in Metabolomic, Lipidomic, and Proteomic Analyses
In Comprehensive Analytical Chemistry (Vol. 83, pp. 123β159).
co-author countries:
United States of America πΊπΈ
Contributors: C. Chouinardβ*, G. Nagyβ*, R. Smithβ* & *β
Source: ORCID
Added: December 5, 2019
2019 review
Ion mobility spectrometry and the omics: Distinguishing isomers, molecular classes and contaminant ions in complex samples
[Review of ]. TRAC-TRENDS IN ANALYTICAL CHEMISTRY, 116, 292β299.
co-author countries:
United States of America πΊπΈ
Contributors: K. Burnum-Johnsonβ*, X. Zhengβ*, J. Dodds n, J. Ash n, D. Fourches n, C. Nicoraβ*, J. Wendler*, T. Metzβ*
author keywords: Ion mobility spectrometry; Mass spectrometry; Omics; Proteomics; Lipidomics; Metabolomics; Glycomics; Exposomics
Sources: Web Of Science, ORCID
Added: July 1, 2019
2019 journal article
Perspectives on Data Analysis in Metabolomics: Points of Agreement and Disagreement from the 2018 ASMS Fall Workshop
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 30(10), 2031β2036.
co-author countries:
United States of America πΊπΈ
Contributors: nβ & G. Pattiβ*
author keywords: Metabolomics; Informatics; ASMS Fall Workshop; Metabolism
MeSH headings : Chromatography, Liquid; Computational Biology / organization & administration; Computational Biology / standards; Humans; Mass Spectrometry; Metabolomics / organization & administration; Metabolomics / standards
Sources: Web Of Science, ORCID
Added: November 11, 2019
2019 journal article
Predicting Ion Mobility Collision Cross-Sections Using a Deep Neural Network: DeepCCS
ANALYTICAL CHEMISTRY, 91(8), 5191β5199.
co-author countries:
Canada π¨π¦ United States of America πΊπΈ
Contributors: P. Planteβ*, Γ. Francovic-Fontaine*, J. Mayβ*, J. McLeanβ*, nβ, F. Lavioletteβ*, M. Marchand*, J. Corbeilβ*
MeSH headings : Algorithms; Deep Learning; Ion Mobility Spectrometry; Magnetic Resonance Spectroscopy; Mass Spectrometry; Metabolomics; Neural Networks, Computer
Sources: Web Of Science, ORCID
Added: May 13, 2019
2018 journal article
A Customizable Flow Injection System for Automated, High Throughput, and Time Sensitive Ion Mobility Spectrometry and Mass Spectrometry Measurements
Analytical Chemistry, 90(1), 737β744.
co-author countries:
United States of America πΊπΈ
Contributors: D. Ortonβ*, M. Tfailyβ*, R. Mooreβ*, B. Lamarche*, X. Zhengβ*, T. Fillmoreβ*, R. Chu*, K. Weitzβ*
MeSH headings : Escherichia coli / chemistry; Escherichia coli Proteins / chemistry; Flow Injection Analysis / instrumentation; Flow Injection Analysis / methods; Hydrogen-Ion Concentration; Ion Mobility Spectrometry / instrumentation; Ion Mobility Spectrometry / methods; Mass Spectrometry / instrumentation; Mass Spectrometry / methods; Soil / chemistry
Source: ORCID
Added: December 5, 2019
2018 journal article
An algorithm to correct saturated mass spectrometry ion abundances for enhanced quantitation and mass accuracy in omic studies
International Journal of Mass Spectrometry, 427, 91β99.
co-author countries:
United States of America πΊπΈ
Contributors: A. Bilbaoβ*, B. Gibbons*, G. Slysz*, K. Crowell*, M. Monroeβ*, Y. Ibrahimβ*, R. Smithβ*, S. Payneβ*, *β
author keywords: Mass spectrometry; Detector saturation; Analog-to-digital converter saturation; Saturation correction; Isotopic envelope; Isotopic ratios; Quantitation
Source: ORCID
Added: December 5, 2019
2018 journal article
Application of multiplexed ion mobility spectrometry towards the identification of host protein signatures of treatment effect in pulmonary tuberculosis
Tuberculosis, 112, 52β61.
co-author countries:
United States of America πΊπΈ
Contributors: K. Kediaβ*, J. Wendler*, *β, K. Burnum-Johnsonβ*, L. Jarsberg*, K. Strattonβ*, A. Wrightβ*, P. Piehowskiβ*
author keywords: Ion mobility spectrometry; Proteomics; Tuberculosis; Antibiotic treatment
MeSH headings : Adolescent; Adult; Antitubercular Agents / therapeutic use; Biomarkers / blood; Blood Proteins / metabolism; Child; Child, Preschool; Chromatography, Liquid; Drug Therapy, Combination; Female; High-Throughput Screening Assays; Host-Pathogen Interactions; Humans; Infant; Infant, Newborn; Ion Mobility Spectrometry; Male; Mass Spectrometry; Middle Aged; North America; Predictive Value of Tests; Prospective Studies; Protein Interaction Maps; Proteomics / methods; South Africa; Spain; Time Factors; Treatment Outcome; Tuberculosis, Pulmonary / blood; Tuberculosis, Pulmonary / diagnosis; Tuberculosis, Pulmonary / drug therapy; Tuberculosis, Pulmonary / microbiology; Uganda; Young Adult
Source: ORCID
Added: December 5, 2019
2018 journal article
Cell type-resolved human lung lipidome reveals cellular cooperation in lung function
Scientific Reports, 8(1).
co-author countries:
United States of America πΊπΈ
Contributors: J. Kyleβ*, G. Clairβ*, G. Bandyopadhyay*, R. Misra*, E. Zinkβ*, K. Bloodsworthβ*, A. Shuklaβ*, Y. Du*
MeSH headings : Databases, Protein; Female; Humans; Lipid Metabolism / physiology; Lung / cytology; Lung / physiology; Male
Source: ORCID
Added: December 5, 2019
2018 journal article
Comparing residential contamination in a Houston environmental justice neighborhood before and after Hurricane Harvey
PLoS ONE, 13(2).
co-author countries:
United States of America πΊπΈ
Contributors: J. Horneyβ*, G. Casillasβ*, *β, K. Stoneβ*, K. Kirschβ*, K. Camargo*, T. Wadeβ*, T. McDonaldβ*
MeSH headings : Cyclonic Storms; Environmental Pollutants / analysis; Gas Chromatography-Mass Spectrometry; Polycyclic Aromatic Hydrocarbons / analysis; Residence Characteristics; Texas
Source: ORCID
Added: December 5, 2019
2018 journal article
Distinguishing enantiomeric amino acids with chiral cyclodextrin adducts and structures for lossless ion manipulations
Electrophoresis, 39(24), 3148β3155.
co-author countries:
United States of America πΊπΈ
Contributors: G. Nagyβ*, C. Chouinardβ*, I. Attah*, I. Webbβ*, S. Garimellaβ*, Y. Ibrahimβ*, *β, R. Smithβ*
author keywords: Chiral separations; Cyclodextrins; Enantiomers; Ion mobility-mass spectrometry; Structures for lossless ion manipulations
MeSH headings : Amino Acids / analysis; Amino Acids / chemistry; Amino Acids / isolation & purification; Cyclodextrins / chemistry; Ions; Mass Spectrometry / methods; Models, Molecular; Stereoisomerism
Source: ORCID
Added: December 5, 2019
2018 journal article
Editorial overview: Omics
Current Opinion in Chemical Biology, 42, A1βA2.
co-author countries:
United Kingdom of Great Britain and Northern Ireland π¬π§ United States of America πΊπΈ
MeSH headings : Genomics / methods; Humans; Ion Mobility Spectrometry / methods; Lipid Metabolism; Mass Spectrometry / methods; Metabolomics / methods; Proteomics / methods
Source: ORCID
Added: December 5, 2019
2018 journal article
Evaluating lipid mediator structural complexity using ion mobility spectrometry combined with mass spectrometry
Bioanalysis, 10(5), 279β289.
co-author countries:
United States of America πΊπΈ
Contributors: J. Kyleβ*, N. Aly*, X. Zhengβ*, K. Burnum-Johnsonβ*, R. Smithβ* & *β
author keywords: collision cross-section; ion mobility spectrometry; lipid mediators
MeSH headings : Animals; Arachidonic Acid / chemistry; Chromatography, Liquid; Docosahexaenoic Acids / analogs & derivatives; Docosahexaenoic Acids / chemistry; Humans; Influenza A virus / growth & development; Ion Mobility Spectrometry; Isomerism; Linoleic Acid / chemistry; Lung / virology; Mass Spectrometry; Mice; Tissue Extracts / chemistry
Source: ORCID
Added: December 5, 2019
2018 journal article
Guest editor's personal foreward
International Journal of Mass Spectrometry, 427, 1β3.
co-author countries:
United States of America πΊπΈ
Source: ORCID
Added: December 5, 2019
2018 journal article
High-throughput serum proteomics for the identification of protein biomarkers of mortality in older men
Aging Cell, 17(2).
co-author countries:
United States of America πΊπΈ
Contributors: E. Orwollβ*, J. Wiedrick*, J. Jacobsβ*, *β, P. Piehowskiβ*, V. Petyukβ*, Y. Gaoβ*, T. Shiβ*
author keywords: aging; biomarker; inflammation; men; mortality; proteomics
MeSH headings : Biomarkers / chemistry; Humans; Male; Mortality; Proteomics / methods
Source: ORCID
Added: December 5, 2019
2018 journal article
Improved Sensitivity and Separations for Phosphopeptides using Online Liquid Chromotography Coupled with Structures for Lossless Ion Manipulations Ion Mobility-Mass Spectrometry
Analytical Chemistry, 90(18), 10889β10896.
co-author countries:
United States of America πΊπΈ
Contributors: C. Chouinardβ*, G. Nagyβ*, I. Webbβ*, T. Shiβ*, *β, S. Prost*, T. Liuβ*, Y. Ibrahimβ*, R. Smithβ*
MeSH headings : Amino Acid Sequence; Bacterial Proteins / analysis; Bacterial Proteins / isolation & purification; Chromatography, Reverse-Phase / methods; Humans; Ion Mobility Spectrometry / methods; Isomerism; Mass Spectrometry / methods; Phosphopeptides / analysis; Phosphopeptides / isolation & purification; Shewanella / chemistry
Source: ORCID
Added: December 5, 2019
2018 content posted
Lactobacillus acidophilus disrupts collaborative multispecies bile acid metabolism
co-author countries:
United States of America πΊπΈ
Sources: Crossref, ORCID
Added: December 16, 2019
2018 journal article
Online Ozonolysis Combined with Ion Mobility-Mass Spectrometry Provides a New Platform for Lipid Isomer Analyses
Analytical Chemistry, 90(2), 1292β1300.
co-author countries:
Australia π¦πΊ United States of America πΊπΈ
Contributors: B. Poadβ*, X. Zhengβ*, T. Mitchell*, R. Smithβ*, *β & S. Blanksbyβ*
MeSH headings : Chromatography, High Pressure Liquid / instrumentation; Equipment Design; Humans; Ion Mobility Spectrometry / instrumentation; Isomerism; Lipids / analysis; Lipids / blood; Ozone / chemistry; Tandem Mass Spectrometry / instrumentation
Source: ORCID
Added: December 5, 2019
2018 journal article
Rapid Ion Mobility Separations of Bile Acid Isomers Using Cyclodextrin Adducts and Structures for Lossless Ion Manipulations
Analytical Chemistry, 90(18), 11086β11091.
co-author countries:
United States of America πΊπΈ
Contributors: C. Chouinardβ*, G. Nagyβ*, I. Webbβ*, S. Garimellaβ*, *β, Y. Ibrahimβ*, R. Smithβ*
MeSH headings : Bile Acids and Salts / chemistry; Bile Acids and Salts / isolation & purification; Cyclodextrins / chemistry; Ions / chemistry; Ions / isolation & purification; Isomerism; Mass Spectrometry / economics; Mass Spectrometry / methods; Models, Molecular; Time Factors
Source: ORCID
Added: December 5, 2019
2018 journal article
Recent advances in lipid separations and structural elucidation using mass spectrometry combined with ion mobility spectrometry, ion-molecule reactions and fragmentation approaches
Current Opinion in Chemical Biology, 42, 111β118.
co-author countries:
United States of America πΊπΈ
Contributors: X. Zhengβ*, R. Smithβ* & *β
MeSH headings : Ion Mobility Spectrometry / methods; Isomerism; Lipids / chemistry; Lipids / classification; Lipids / isolation & purification; Mass Spectrometry / methods; Molecular Structure
Source: ORCID
Added: December 5, 2019
2018 journal article
The MPLEx protocol for multi-omic analyses of soil samples
Journal of Visualized Experiments, 2018(135).
co-author countries:
United States of America πΊπΈ
Contributors: C. Nicoraβ*, K. Burnum-Johnsonβ*, E. Nakayasuβ*, C. Caseyβ*, R. Whiteβ*, T. Chowdhuryβ*, J. Kyleβ*, Y. Kimβ*
author keywords: Chemistry; Issue 135; MPLEx; Metaproteomics; Lipidomics; Metabolomics; Multi-omics; Mass Spectrometry
MeSH headings : Mass Spectrometry / methods; Metabolomics / methods; Soil / chemistry
Source: ORCID
Added: December 5, 2019
2018 journal article
Towards Discovery and Targeted Peptide Biomarker Detection Using nanoESI-TIMS-TOF MS
Journal of the American Society for Mass Spectrometry, 29(5), 817β826.
co-author countries:
United States of America πΊπΈ
Contributors: A. Garabedian*, P. Benigni*, C. Ramirez*, *β, T. Liu*, R. Smithβ*, F. Fernandez-Limaβ*
author keywords: Discovery and targeted monitoring; Trapped ion mobility spectrometry; Mass; Spectrometry; Biomarker detection; Quantitative proteomics
MeSH headings : Amino Acid Sequence; Biomarkers, Tumor / analysis; Breast Neoplasms / chemistry; Breast Neoplasms / pathology; Female; Humans; Ion Mobility Spectrometry / methods; Peptides / analysis; Proteomics / methods; Spectrometry, Mass, Electrospray Ionization / methods; Tandem Mass Spectrometry / methods; Workflow
Source: ORCID
Added: December 5, 2019
2018 journal article
Unraveling the isomeric heterogeneity of glycans: Ion mobility separations in structures for lossless ion manipulations
Chemical Communications, 54(83), 11701β11704.
co-author countries:
United States of America πΊπΈ
Contributors: G. Nagyβ*, I. Attah*, S. Garimellaβ*, K. Tangβ*, Y. Ibrahimβ*, *β, R. Smithβ*
Source: ORCID
Added: December 5, 2019
2018 journal article
Using Skyline to Analyze Data-Containing Liquid Chromatography, Ion Mobility Spectrometry, and Mass Spectrometry Dimensions
Journal of the American Society for Mass Spectrometry, 29(11), 2182β2188.
co-author countries:
United States of America πΊπΈ
Contributors: B. MacLeanβ*, B. Prattβ*, J. Egertson*, M. MacCossβ*, R. Smithβ* & *β
author keywords: Ion mobility spectrometry; Skyline; Data independent acquisition; Proteomics
Source: ORCID
Added: December 5, 2019
2018 journal article
Utilizing Ion Mobility Spectrometry and Mass Spectrometry for the Analysis of Polycyclic Aromatic Hydrocarbons, Polychlorinated Biphenyls, Polybrominated Diphenyl Ethers and Their Metabolites
Analytica Chimica Acta, 1037, 265β273.
co-author countries:
United States of America πΊπΈ
Contributors: X. Zhengβ*, K. Dupuis*, N. Aly*, Y. Zhouβ*, F. Smith*, K. Tangβ*, R. Smithβ*, *β
author keywords: Ion mobility spectrometry; Collision cross section; Xenobiotics; Polycyclic aromatic hydrocarbons; Polychlorinated biphenyls; Polybrominated diphenyl ethers; Electrospray ionization; Atmospheric pressure chemical ionization; Atmospheric pressure photoionization
MeSH headings : Chromatography, Liquid; Halogenated Diphenyl Ethers / analysis; Halogenated Diphenyl Ethers / metabolism; Ion Mobility Spectrometry; Mass Spectrometry; Molecular Structure; Polybrominated Biphenyls / analysis; Polybrominated Biphenyls / metabolism; Polycyclic Aromatic Hydrocarbons / analysis; Polycyclic Aromatic Hydrocarbons / metabolism
Sources: ORCID, Web Of Science
Added: December 5, 2019
2017 journal article
A structural examination and collision cross section database for over 500 metabolites and xenobiotics using drift tube ion mobility spectrometry
Chemical Science, 8(11), 7724β7736.
co-author countries:
United States of America πΊπΈ
Contributors: X. Zhengβ*, N. Aly*, Y. Zhouβ*, K. Dupuis*, A. Bilbaoβ*, V. Paurusβ*, D. Ortonβ*, R. Wilson*
Source: ORCID
Added: December 5, 2019
2017 journal article
An Interlaboratory Evaluation of Drift Tube Ion Mobility-Mass Spectrometry Collision Cross Section Measurements
Analytical Chemistry, 89(17), 9048β9055.
co-author countries:
Austria π¦πΉ United States of America πΊπΈ
Contributors: S. Stow*, T. Causonβ*, X. Zhengβ*, R. Kurulugama*, T. Mairinger*, J. Mayβ*, E. Rennie*, *β
MeSH headings : Calibration; Ion Mobility Spectrometry / methods; Laboratories / standards; Lipids / chemistry; Mass Spectrometry / methods; Molecular Structure; Nitrogen / chemistry; Proteins / chemistry; Reproducibility of Results
Source: ORCID
Added: December 5, 2019
2017 journal article
Characterizing the lipid and metabolite changes associated with placental function and pregnancy complications using ion mobility spectrometry-mass spectrometry and mass spectrometry imaging
Placenta, 60, S67βS72.
co-author countries:
United States of America πΊπΈ
Contributors: K. Burnum-Johnsonβ*, *β & T. Metzβ*
author keywords: Deep placentation; Pregnancy complications; Mass spectrometry imaging; Metabolome; Lipidome; Ion mobility spectrometry-mass spectrometry; Nano-DESI
MeSH headings : Animals; Chromatography, High Pressure Liquid; Embryo Implantation; Female; Humans; Ion Mobility Spectrometry; Lipid Metabolism; Metabolomics / methods; Metabolomics / trends; Models, Biological; Placenta / metabolism; Placenta / physiology; Placenta / physiopathology; Placentation; Pregnancy; Pregnancy Complications / metabolism; Pregnancy Complications / physiopathology; Spectrometry, Mass, Electrospray Ionization; Spectrometry, Mass, Secondary Ion
Source: ORCID
Added: December 5, 2019
2017 journal article
Comparing identified and statistically significant lipids and polar metabolites in 15-year old serum and dried blood spot samples for longitudinal studies
Rapid Communications in Mass Spectrometry, 31(5), 447β456.
co-author countries:
United States of America πΊπΈ
Contributors: J. Kyleβ*, C. Caseyβ*, K. Strattonβ*, E. Zinkβ*, Y. Kimβ*, X. Zhengβ*, M. Monroeβ*, K. Weitzβ*
Source: ORCID
Added: December 5, 2019
2017 journal article
Compression Ratio Ion Mobility Programming (CRIMP) Accumulation and Compression of Billions of Ions for Ion Mobility-Mass Spectrometry Using Traveling Waves in Structures for Lossless Ion Manipulations (SLIM)
Analytical Chemistry, 89(12), 6432β6439.
co-author countries:
United States of America πΊπΈ
Contributors: L. Dengβ*, S. Garimellaβ*, A. Hamidβ*, I. Webbβ*, I. Attah*, R. Norheim*, S. Prost*, X. Zhengβ*
MeSH headings : Ion Mobility Spectrometry / instrumentation; Ions / chemistry; Mass Spectrometry / instrumentation; Peptides / analysis
Source: ORCID
Added: December 5, 2019
2017 chapter
Conventional and Advanced Separations in Mass Spectrometry-Based Metabolomics: Methodologies and Applications
In Encyclopedia of Spectroscopy and Spectrometry (pp. 376β384).
co-author countries:
United States of America πΊπΈ
Contributors: H. Heyman*, X. Zhang*, K. Tangβ*, *β & T. Metzβ*
Sources: ORCID, Crossref
Added: December 5, 2019
2017 book
Coupling front-end separations, ion mobility spectrometry, and mass spectrometry for enhanced multidimensional biological and environmental analyses
In Annual Review of Analytical Chemistry (Vol. 10, pp. 71β92).
co-author countries:
United States of America πΊπΈ
Contributors: X. Zhengβ*, R. Wojcikβ*, X. Zhangβ*, Y. Ibrahimβ*, K. Burnum-Johnsonβ*, D. Ortonβ*, M. Monroeβ*, R. Mooreβ*, R. Smithβ*, *β
author keywords: drift tube IMS; gas chromatography; supercritical fluid chromatography; liquid chromatography; solid-phase extraction; capillary electrophoresis; field asymmetric ion mobility spectrometry; microfluidics; structure for lossless ion manipulations
MeSH headings : Bacterial Toxins / analysis; Chromatography, Liquid; Chromatography, Supercritical Fluid; Environmental Monitoring; Gases / chemistry; Ions / chemistry; Mass Spectrometry / instrumentation; Mass Spectrometry / methods; Microfluidics / methods; Pharmaceutical Preparations / analysis
Source: ORCID
Added: December 5, 2019
2017 journal article
Distinguishing D- and L-aspartic and isoaspartic acids in amyloid Ξ² peptides with ultrahigh resolution ion mobility spectrometry
Chemical Communications, 53(56), 7913β7916.
co-author countries:
United States of America πΊπΈ
Contributors: X. Zhengβ*, L. Dengβ*, *β, Y. Ibrahimβ*, V. Petyukβ* & R. Smithβ*
MeSH headings : Amyloid beta-Peptides / chemistry; Aspartic Acid / chemistry; Ion Mobility Spectrometry / methods; Isoaspartic Acid / chemistry; Peptide Fragments / chemistry; Protein Conformation; Stereoisomerism
Sources: ORCID, Web Of Science
Added: December 5, 2019
2017 journal article
Enhancing glycan isomer separations with metal ions and positive and negative polarity ion mobility spectrometry-mass spectrometry analyses
Analytical and Bioanalytical Chemistry, 409(2), 467β476.
co-author countries:
United States of America πΊπΈ
Contributors: X. Zhengβ*, X. Zhangβ*, N. Schocker*, R. Renslowβ*, D. Ortonβ*, J. Khamsi*, R. Ashmusβ*, I. Almeidaβ*
author keywords: Ion mobility spectrometry; Mass spectrometry; Glycans; O-Glycans; Isomers
MeSH headings : Chemistry Techniques, Analytical / methods; Ion Mobility Spectrometry; Ions / chemistry; Isomerism; Mass Spectrometry; Metals / chemistry; Polysaccharides / chemistry; Polysaccharides / isolation & purification
Source: ORCID
Added: December 5, 2019
2017 journal article
Identification of Hip BMD Loss and Fracture Risk Markers Through Population-Based Serum Proteomics
Journal of Bone and Mineral Research, 32(7), 1559β1567.
co-author countries:
United States of America πΊπΈ
Contributors: C. Nielson*, J. Wiedrick*, J. Shenβ*, J. Jacobsβ*, *β, A. Baraff*, P. Piehowskiβ*, C. Leeβ*
author keywords: BIOCHEMICAL MARKERS OF BONE TURNOVER; OSTEOPOROSIS; GENERAL POPULATION STUDIES
MeSH headings : Aged; Aged, 80 and over; Biomarkers / blood; Bone Density; Hip; Hip Fractures / blood; Humans; Male; Osteoporosis / blood; Osteoporosis / pathology; Peptides / blood; Proteome / metabolism; Proteomics
Source: ORCID
Added: December 5, 2019
2017 journal article
Integrating ion mobility spectrometry into mass spectrometry-based exposome measurements: what can it add and how far can it go?
Bioanalysis, 9(1), 81β98.
co-author countries:
Austria π¦πΉ Switzerland π¨π United States of America πΊπΈ
Contributors: T. Metzβ*, *β, E. Schymanskiβ*, R. Renslowβ*, D. Thomas*, T. Causonβ*, I. Webbβ*, S. Hannβ*, R. Smithβ*, J. Teeguardenβ*
author keywords: collision cross section; exposome; ion mobility spectrometry; mass spectrometry; metabolome
MeSH headings : Animals; Chromatography, Liquid / methods; Computational Biology / methods; High-Throughput Screening Assays / methods; Humans; Mass Spectrometry / methods; Metabolome; Workflow
Source: ORCID
Added: December 5, 2019
2017 journal article
Ligand induced structural isomerism in phosphine coordinated gold clusters revealed by ion mobility mass spectrometry
Chemical Communications, 53(53), 7389β7392.
co-author countries:
United States of America πΊπΈ
Contributors: M. Ligare*, *β, J. Laskinβ* & G. Johnsonβ*
Source: ORCID
Added: December 5, 2019
2017 journal article
Lipid and Glycolipid Isomer Analyses Using Ultra-High Resolution Ion Mobility Spectrometry Separations
International Journal of Molecular Sciences, 18(1).
co-author countries:
United States of America πΊπΈ
Contributors: R. Wojcikβ*, I. Webbβ*, L. Dengβ*, S. Garimellaβ*, S. Prost*, Y. Ibrahimβ*, *β, R. Smithβ*
author keywords: lipids; glycolipids; isomers; ion mobility spectrometry
MeSH headings : Glycolipids / chemistry; Glycolipids / isolation & purification; Isomerism; Mass Spectrometry / methods
Source: ORCID
Added: December 5, 2019
2017 journal article
New frontiers for mass spectrometry based upon structures for lossless ion manipulations
Analyst, 142(7), 1010β1021.
co-author countries:
United States of America πΊπΈ
Contributors: Y. Ibrahimβ*, A. Hamidβ*, L. Dengβ*, S. Garimellaβ*, I. Webbβ*, *β, R. Smithβ*
Source: ORCID
Added: December 5, 2019
2017 journal article
PIXiE: an algorithm for automated ion mobility arrival time extraction and collision cross section calculation using global data association
Bioinformatics (Oxford, England), 33(17), 2715β2722.
co-author countries:
United States of America πΊπΈ
Contributors: J. Maβ*, C. Caseyβ*, X. Zhengβ*, Y. Ibrahimβ*, C. Wilkins*, R. Renslowβ*, D. Thomas*, S. Payneβ*
MeSH headings : Algorithms; Computational Biology / methods; Mass Spectrometry / methods; Software
Source: ORCID
Added: December 5, 2019
2017 journal article
Profiling microbial lignocellulose degradation and utilization by emergent omics technologies
Critical Reviews in Biotechnology, 37(5), 626β640.
co-author countries:
United States of America πΊπΈ
Contributors: J. Rosnow*, L. Andersonβ*, R. Nairβ*, *β & A. Wrightβ*
author keywords: Genomics; proteomics; transcriptomics; NMR; fluorescence-activated cell sorting; metabolomics; activity-based probes
MeSH headings : Biofuels; Lignin / metabolism
Sources: ORCID, Web Of Science
Added: December 5, 2019
2017 journal article
Serpentine Ultralong Path with Extended Routing (SUPER) High Resolution Traveling Wave Ion Mobility-MS using Structures for Lossless Ion Manipulations
Analytical Chemistry, 89(8), 4628β4634.
co-author countries:
United States of America πΊπΈ
Contributors: L. Dengβ*, I. Webbβ*, S. Garimellaβ*, A. Hamidβ*, X. Zhengβ*, R. Norheim*, S. Prost*, G. Anderson*
MeSH headings : Humans; Ion Mobility Spectrometry / methods; Ions / chemistry; Isomerism; Milk, Human / metabolism; Oligosaccharides / chemistry
Source: ORCID
Added: December 5, 2019
2017 journal article
Structural Elucidation of cis/trans Dicaffeoylquinic Acid Photoisomerization Using Ion Mobility Spectrometry-Mass Spectrometry
Journal of Physical Chemistry Letters, 8(7), 1381β1388.
co-author countries:
United States of America πΊπΈ South Africa πΏπ¦
Contributors: X. Zhengβ*, R. Renslowβ*, M. Makola*, I. Webbβ*, L. Dengβ*, D. Thomas*, N. Govindβ*, Y. Ibrahimβ*
Source: ORCID
Added: December 5, 2019
2016 journal article
A Structures for Lossless Ion Manipulations (SLIM) Module for Collision Induced Dissociation
Journal of the American Society For Mass Spectrometry, 27(7), 1285β1288.
co-author countries:
United States of America πΊπΈ
Contributors: I. Webbβ*, S. Garimellaβ*, R. Norheim*, *β, Y. Ibrahimβ* & R. Smithβ*
author keywords: Collision induced dissociation; Ion mobility spectrometry; rf Confinement; Ion optics; Peptide fragmentation; Manipulation; Conveyor
Source: ORCID
Added: December 5, 2019
2016 journal article
A multi-omic future for microbiome studies
Nature Microbiology, 1(5).
co-author countries:
United States of America πΊπΈ
Contributors: J. Janssonβ* & *β
MeSH headings : Gene Expression Profiling; Humans; Metabolomics; Metagenomics; Microbiota; Proteomics
Source: ORCID
Added: December 5, 2019
2016 journal article
Achieving High Resolution Ion Mobility Separations Using Traveling Waves in Compact Multiturn Structures for Lossless Ion Manipulations
Analytical Chemistry, 88(18), 8949β8956.
co-author countries:
United States of America πΊπΈ
Contributors: A. Hamidβ*, S. Garimellaβ*, Y. Ibrahimβ*, L. Dengβ*, X. Zhengβ*, I. Webbβ*, G. Anderson*, S. Prost*
MeSH headings : Algorithms; Amino Acid Sequence; Bradykinin / analysis; Equipment Design; Ions / chemistry; Mass Spectrometry / methods; Peptides / analysis
Source: ORCID
Added: December 5, 2019
2016 journal article
Development of an Ion Mobility Spectrometry-Orbitrap Mass Spectrometer Platform
Analytical Chemistry, 88(24), 12152β12160.
co-author countries:
United States of America πΊπΈ
Contributors: Y. Ibrahimβ*, S. Garimellaβ*, S. Prost*, R. Wojcikβ*, R. Norheim*, *β, I. Rusynβ*, R. Smithβ*
MeSH headings : Algorithms; Animals; Artifacts; Cattle; Equipment Design; Ion Mobility Spectrometry / instrumentation; Ions / analysis; Mass Spectrometry / instrumentation; Petroleum / analysis; Phosphopyruvate Hydratase / chemistry; Proteomics / instrumentation; Serum Albumin, Bovine / chemistry
Source: ORCID
Added: December 5, 2019
2016 journal article
Greatly Increasing Trapped Ion Populations for Mobility Separations Using Traveling Waves in Structures for Lossless Ion Manipulations
Analytical Chemistry, 88(20), 10143β10150.
co-author countries:
United States of America πΊπΈ
Contributors: L. Dengβ*, Y. Ibrahimβ*, S. Garimellaβ*, I. Webbβ*, A. Hamidβ*, R. Norheim*, S. Prost*, J. Sandoval*, *β, R. Smithβ*
Source: ORCID
Added: December 5, 2019
2016 journal article
Ion Mobility Separations of Isomers based upon Long Path Length Structures for Lossless Ion Manipulations Combined with Mass Spectrometry
Chemistryselect, 1(10), 2396β2399.
co-author countries:
United States of America πΊπΈ
Contributors: L. Dengβ*, Y. Ibrahimβ*, *β, N. Aly*, A. Hamidβ*, X. Zhangβ*, X. Zhengβ*, S. Garimellaβ*
author keywords: Structures for Lossless Ion Manipulations (SLIM); Ion Mobility Spectrometry; Mass Spectrometry; Isomers
Source: ORCID
Added: December 5, 2019
2016 journal article
Mass spectrometry-based monitoring of millisecond protein-ligand binding dynamics using an automated microfluidic platform
Lab on a Chip, 16(9), 1544β1548.
co-author countries:
United States of America πΊπΈ
Contributors: Y. Congβ*, S. Katipamula*, C. Trader*, D. Ortonβ*, T. Gengβ*, *β, R. Kellyβ*
MeSH headings : Algorithms; Automation, Laboratory; Carbonic Anhydrase I / antagonists & inhibitors; Carbonic Anhydrase I / chemistry; Carbonic Anhydrase I / metabolism; Carbonic Anhydrase Inhibitors / chemistry; Carbonic Anhydrase Inhibitors / metabolism; Carbonic Anhydrase Inhibitors / pharmacology; Diffusion; Diuretics / chemistry; Diuretics / metabolism; Diuretics / pharmacology; Equipment Design; Furosemide / chemistry; Furosemide / metabolism; Humans; Kinetics; Lab-On-A-Chip Devices; Ligands; Reproducibility of Results; Spectrometry, Mass, Electrospray Ionization
Source: ORCID
Added: December 5, 2019
2016 journal article
Mobility-Selected Ion Trapping and Enrichment Using Structures for Lossless Ion Manipulations
Analytical Chemistry, 88(3), 1728β1733.
co-author countries:
United States of America πΊπΈ
Contributors: T. Chenβ*, Y. Ibrahimβ*, I. Webbβ*, S. Garimellaβ*, X. Zhang*, A. Hamidβ*, L. Dengβ*, W. Karnesky*
MeSH headings : Humans; Ions / chemistry; Mass Spectrometry / methods; Peptides / analysis; Protein Conformation
Source: ORCID
Added: December 5, 2019
2016 journal article
SPE-IMS-MS: An automated platform for sub-sixty second surveillance of endogenous metabolites and xenobiotics in biofluids
Clinical Mass Spectrometry, 2, 1β10.
co-author countries:
United States of America πΊπΈ
Contributors: X. Zhangβ*, M. Romm*, X. Zhengβ*, E. Zinkβ*, Y. Kimβ*, K. Burnum-Johnsonβ*, D. Ortonβ*, A. Apffel*
author keywords: Ion mobility spectrometry; Mass spectrometry; Metabolomics; Exposomics
Source: ORCID
Added: December 5, 2019
2016 journal article
Simultaneous Proteomic Discovery and Targeted Monitoring using Liquid Chromatography, Ion Mobility Spectrometry, and Mass Spectrometry
Molecular &Amp; Cellular Proteomics, 15(12), 3694β3705.
co-author countries:
United States of America πΊπΈ
Contributors: K. Burnum-Johnsonβ*, S. Nie*, C. Caseyβ*, M. Monroeβ*, D. Ortonβ*, Y. Ibrahimβ*, M. Gritsenkoβ*, T. Clauss*
MeSH headings : Animals; Breast Neoplasms / metabolism; Chromatography, Liquid / methods; Female; Humans; Mass Spectrometry / methods; Mice; Neoplasm Transplantation; Peptides / analysis; Proteome / isolation & purification; Proteomics / methods
Source: ORCID
Added: December 5, 2019
2016 journal article
Spatial Ion Peak Compression and its Utility in Ion Mobility Spectrometry
Journal of the American Society For Mass Spectrometry, 27(6), 1128β1135.
co-author countries:
United States of America πΊπΈ
Contributors: S. Garimellaβ*, Y. Ibrahimβ*, K. Tangβ*, I. Webbβ*, *β, A. Tolmachevβ*, T. Chen*, G. Anderson*, R. Smithβ*
author keywords: Ion mobility spectrometry; Diffusion; Peak compression; High resolution IMS
MeSH headings : Ion Mobility Spectrometry; Ions; Pressure
Source: ORCID
Added: December 5, 2019
2016 journal article
Squeezing of Ion Populations and Peaks in Traveling Wave Ion Mobility Separations and Structures for Lossless Ion Manipulations Using Compression Ratio Ion Mobility Programming
Analytical Chemistry, 88(23), 11877β11885.
co-author countries:
United States of America πΊπΈ
Contributors: S. Garimellaβ*, A. Hamidβ*, L. Dengβ*, Y. Ibrahimβ*, I. Webbβ*, *β, S. Prost*, R. Norheim*, G. Anderson*, R. Smithβ*
MeSH headings : Electrodes; Ions / chemistry; Ions / isolation & purification; Mass Spectrometry / instrumentation; Mass Spectrometry / methods; Molecular Structure
Source: ORCID
Added: December 5, 2019
2016 journal article
Surprising impact of remote groups on the folding-unfolding and dimer-chain equilibria of bifunctional H-bonding unimers
Chemical Communications, 52(19), 3773β3776.
co-author countries:
China π¨π³ United States of America πΊπΈ
Contributors: R. Liu, S. Chengβ*, *β, R. Smithβ*, X. Zengβ* & B. Gongβ*
MeSH headings : Amides / chemistry; Dimerization; Hydrogen Bonding; Proton Magnetic Resonance Spectroscopy
Source: ORCID
Added: December 5, 2019
2016 journal article
Surprising impact of remote groups on the folding-unfolding and dimer-chain equilibria of bifunctional H-bonding unimers (vol 52, pg 3773, 2016)
Chemical Communications, 52(29), 5205.
co-author countries:
China π¨π³ United States of America πΊπΈ
Contributors: R. Liu, S. Chenβ*, *β, R. Smithβ*, X. Zeng* & B. Gongβ*
Source: ORCID
Added: December 5, 2019
2016 journal article
The fungal cultivar of leaf-cutter ants produces specific enzymes in response to different plant substrates
Molecular Ecology, 25(22), 5795β5805.
co-author countries:
United States of America πΊπΈ
Contributors: L. Khadempourβ*, K. Burnum-Johnsonβ*, *β, C. Nicoraβ*, B. Webb-Robertson*, R. Whiteβ*, M. Monroeβ*, E. Huang*, R. Smithβ*, C. Currieβ*
author keywords: fungi; leaf-cutter ants; metaproteomics; microbial ecology; symbiosis
MeSH headings : Agaricales / enzymology; Animals; Ants / microbiology; Flowers / metabolism; Fungal Proteins / metabolism; Plant Leaves / metabolism; Plants / metabolism; Proteomics; Symbiosis
Source: ORCID
Added: December 5, 2019
2016 journal article
The past, present and future of microbiome analyses
Nature Protocols, 11(11), 4β8.
co-author countries:
United States of America πΊπΈ
Contributors: R. Whiteβ*, S. Callister*, R. Mooreβ*, *β & J. Janssonβ*
Source: ORCID
Added: December 5, 2019
2016 journal article
Ultra-High Resolution Ion Mobility Separations Utilizing Traveling Waves in a 13 m Serpentine Path Length Structures for Lossless Ion Manipulations Module
Analytical Chemistry, 88(18), 8957β8964.
co-author countries:
United States of America πΊπΈ
Contributors: L. Dengβ*, Y. Ibrahimβ*, A. Hamidβ*, S. Garimellaβ*, I. Webbβ*, X. Zhengβ*, S. Prost*, J. Sandoval*
MeSH headings : Animals; Cattle; Electrodes; Electromagnetic Phenomena; Equipment Design; Ions / analysis; Isomerism; Mass Spectrometry / instrumentation; Mass Spectrometry / methods; Oligosaccharides / analysis; Oligosaccharides / chemistry; Peptides / analysis; Serum Albumin, Bovine / chemistry
Source: ORCID
Added: December 5, 2019
2016 journal article
Uncovering biologically significant lipid isomers with liquid chromatography, ion mobility spectrometry and mass spectrometry
Analyst, 141(5), 1649β1659.
co-author countries:
United States of America πΊπΈ
Contributors: J. Kyleβ*, X. Zhangβ*, K. Weitzβ*, M. Monroeβ*, Y. Ibrahimβ*, R. Mooreβ*, J. Cha*, X. Sunβ*
MeSH headings : Chromatography, Liquid / methods; Fatty Acids / chemistry; Fatty Acids / metabolism; Lipids / chemistry; Lipids / isolation & purification; Mass Spectrometry / methods; Metabolomics / methods; Stereoisomerism
Source: ORCID
Added: December 5, 2019
2015 journal article
Development of a new ion mobility (quadrupole) time-of-flight mass spectrometer
International Journal of Mass Spectrometry, 377(1), 655β662.
co-author countries:
United States of America πΊπΈ
Contributors: Y. Ibrahimβ*, *β, W. Danielson*, R. Norheim*, D. Prior*, G. Anderson*, M. Belov*, R. Smithβ*
Source: ORCID
Added: December 5, 2019
2015 journal article
Enhancing biological analyses with three dimensional field asymmetric ion mobility, low field drift tube ion mobility and mass spectrometry (ΞΌFAIMS/IMS-MS) separations
Analyst, 140(20), 6955β6963.
co-author countries:
United States of America πΊπΈ
Contributors: X. Zhangβ*, Y. Ibrahimβ*, T. Chenβ*, J. Kyleβ*, R. Norheim*, M. Monroeβ*, R. Smithβ*, *β
MeSH headings : Animals; Cattle; Mass Spectrometry / methods; Motion; Peptide Fragments / chemistry; Peptide Fragments / isolation & purification; Proteolysis; Serum Albumin, Bovine / chemistry; Serum Albumin, Bovine / metabolism; Trypsin / metabolism
Source: ORCID
Added: December 5, 2019
2015 journal article
Enhancing bottom-up and top-down proteomic measurements with ion mobility separations
Proteomics, 15(16), 2766β2776.
co-author countries:
United States of America πΊπΈ
Contributors: *β, K. Burnum-Johnsonβ*, Y. Ibrahimβ*, D. Ortonβ*, M. Monroeβ*, R. Kellyβ*, R. Mooreβ*, X. Zhangβ*
author keywords: Ion mobility separations; Ion mobility spectrometry; Mass spectrometry; Proteomics
MeSH headings : Chromatography, Liquid / methods; Complex Mixtures; Mass Spectrometry / methods; Peptides / analysis; Peptides / chemistry; Proteins / analysis; Proteins / chemistry; Proteomics / methods
Source: ORCID
Added: December 5, 2019
2015 journal article
Ion Trapping, Storage, and Ejection in Structures for Lossless Ion Manipulations
Analytical Chemistry, 87(12), 6010β6016.
co-author countries:
United States of America πΊπΈ
Contributors: X. Zhangβ*, S. Garimellaβ*, S. Prost*, I. Webbβ*, T. Chen*, K. Tangβ*, A. Tolmachevβ*, R. Norheim*
MeSH headings : Electrodes; Ions / analysis; Mass Spectrometry / instrumentation
Sources: ORCID, Web Of Science
Added: December 5, 2019
2015 journal article
Ion manipulations in structures for lossless ion manipulations (SLIM): computational evaluation of a 90Β° turn and a switch.
The Analyst, 140(20), 6845β6852.
co-author countries:
United States of America πΊπΈ
Contributors: S. Garimellaβ*, Y. Ibrahimβ*, I. Webbβ*, A. Ipsen*, T. Chen*, A. Tolmachevβ*, *β, G. Anderson*, R. Smithβ*
MeSH headings : Mass Spectrometry / methods; Models, Theoretical; Motion; Pressure
Source: ORCID
Added: December 5, 2019
2015 chapter