Elizabeth H Scholl

Works (18)

Updated: April 5th, 2024 04:07

2023 journal article

Toxicological and pharmacokinetic properties of sucralose-6-acetate and its parent sucralose: in vitro screening assays

Journal of Toxicology and Environmental Health, Part B, 5, 1–35.

By: S. Schiffman n, E. Scholl*, T. Furey* & H. Nagle n

author keywords: Sucralose; sucralose-6-acetate; genotoxicity; gene expression; intestinal barrier
topics (OpenAlex): Biochemical Analysis and Sensing Techniques; Olfactory and Sensory Function Studies; Helicobacter pylori-related gastroenterology studies
TL;DR: Measurements of transepithelial electrical resistance (TEER) and permeability in human transverse colon epithelium indicated that sucralose-6-acetate and Sucralose both impaired intestinal barrier integrity. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries, Crossref
Added: June 12, 2023

2022 article

A resource for integrated genomic analysis of the human liver

Zhou, Y.-H., Gallins, P. J., Etheridge, A. S., Jima, D., Scholl, E., Wright, F. A., & Innocenti, F. (2022, September 7). Scientific Reports, Vol. 9.

MeSH headings : Bayes Theorem; Genome-Wide Association Study / methods; Genomics; Humans; Liver; Polymorphism, Single Nucleotide; Quantitative Trait Loci
topics (OpenAlex): Hepatitis C virus research; Liver Disease Diagnosis and Treatment; Cancer-related molecular mechanisms research
TL;DR: This study generated whole-transcriptome RNA-Seq from genotyped liver samples and used existing data from the GTEx Project and previous liver eQTL studies to create an enhanced transcriptomic sequence resource in the human liver, finding that MHC genes, and especially class II genes, are enriched for liver-specific eZTL patterns. (via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: September 8, 2022

2022 article

The Genome of the Poecilogonous Annelid Streblospio benedicti

Zakas, C., Harry, N. D., Scholl, E. H., & Rockman, M. V. (2022, January 24). (D. Lavrov, Ed.). Genome Biology and Evolution, Vol. 2.

By: C. Zakas n, N. Harry n, E. Scholl n & M. Rockman*

Ed(s): D. Lavrov

author keywords: poecilogony; life-history evolution; developmental genomics; Lophotrochozoa
MeSH headings : Animals; Annelida / genetics; Larva / genetics; Phylogeny; Polychaeta / genetics; Sequence Analysis, DNA
topics (OpenAlex): Cephalopods and Marine Biology; Marine Biology and Ecology Research; Coral and Marine Ecosystems Studies
TL;DR: An annotated chromosomal-level genome assembly of S. benedicti is presented, which is the largest annelid genome to date that has been assembled to chromosomal scaffolds, yet it does not show evidence of extensive gene family expansion, but rather longer intergenic regions. (via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: February 25, 2022

2021 journal article

Genome and transcriptome sequencing of the green bottle fly, Lucilia sericata, reveals underlying factors of sheep flystrike and maggot debridement therapy

Genomics, 113(6), 3978–3988.

By: R. Davis n, E. Belikoff n, A. Dickey n, E. Scholl n, J. Benoit* & M. Scott n

author keywords: Lucilia sericata; Maggot debridement therapy; Whole genome; Salivary gland; Malpighian tubule; Heat shock
MeSH headings : Animals; Calliphoridae; Debridement; Diptera / genetics; Humans; Larva / genetics; Larva / metabolism; Sheep / genetics; Transcriptome
topics (OpenAlex): Forensic Entomology and Diptera Studies; Insect behavior and control techniques; Insect and Pesticide Research
TL;DR: The assembly of a 565.3 Mb genome from long read PacBio DNA sequencing of genomic DNA is reported, which will underpin future genetic studies and in development of engineered strains for genetic control of L. sericata and for biotechnology-enhanced maggot therapy. (via Semantic Scholar)
Sources: Web Of Science, ORCID, Crossref, NC State University Libraries
Added: October 26, 2021

2021 article

High-resolution characterization of the structural features and genetic variation of six feline leukocyte antigen class I loci via single molecule, real-time (SMRT) sequencing

Holmes, J. C., Scholl, E. H., Dickey, A. N., & Hess, P. R. (2021, June 26). Immunogenetics, Vol. 6.

By: J. Holmes n, E. Scholl n, A. Dickey n & P. Hess n

author keywords: Cats; Class I genes; High-throughput DNA sequencing; Major histocompatibility complex; Polymorphism
MeSH headings : Animals; Cats; Exons; Genes, MHC Class I / genetics; Genetic Variation; Haplotypes; High-Throughput Nucleotide Sequencing; Histocompatibility Antigens Class I / chemistry; Histocompatibility Antigens Class I / genetics; Sequence Analysis, DNA / methods
topics (OpenAlex): T-cell and B-cell Immunology; Immune Cell Function and Interaction; Microbial infections and disease research
TL;DR: A targeted approach to FLAI genotyping, using the single-molecule real-time (SMRT) platform, which allows full-length (3.4-kb) reads without assembly, is developed, which could allow highly accurate allele surveys in large cat cohorts. (via Semantic Scholar)
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UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: July 6, 2021

2020 article

Complete Genome Sequences of Six Lactobacilli Isolated from American Quarter Horses

Meinders, R. I., Mendoza, M., Dickey, A. N., Scholl, E. H., & Hassan, H. M. (2020, November 18). (D. Rasko, Ed.). Microbiology Resource Announcements, Vol. 9.

By: R. Meinders n, M. Mendoza n, A. Dickey n, E. Scholl n & H. Hassan n

Ed(s): D. Rasko

topics (OpenAlex): Probiotics and Fermented Foods; Genomics and Phylogenetic Studies; Gut microbiota and health
TL;DR: The complete circular genome sequences of six Lactobacillus strains and their plasmids, if any, from the fecal material of quarter horses at different ages are reported. (via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: January 4, 2021

2020 journal article

Genomic analyses of a livestock pest, the New World screwworm, find potential targets for genetic control programs

Communications Biology, 3(1).

By: M. Scott n, J. Benoit*, R. Davis n, S. Bailey*, V. Varga*, E. Martinson*, P. Hickner*, Z. Syed* ...

MeSH headings : Animals; Calliphoridae / genetics; Calliphoridae / pathogenicity; Evolution, Molecular; Gene Expression Regulation / genetics; Genomics / methods; Host-Parasite Interactions / genetics; Larva / genetics; Larva / growth & development; Livestock / genetics; Livestock / parasitology; Pest Control, Biological; RNA-Seq; Screw Worm Infection / genetics; Screw Worm Infection / parasitology; South America
topics (OpenAlex): CRISPR and Genetic Engineering; Insect symbiosis and bacterial influences; Insect Resistance and Genetics
TL;DR: The genome of the New World screwworm is reported, using transcriptomic analysis of the insect’s developmental stages combined with genomic analyses to identify genes that may be important for its parasitic lifestyle. (via Semantic Scholar)
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Sources: Web Of Science, ORCID, Crossref, NC State University Libraries
Added: September 7, 2020

2018 article

Polyphasic characterization of four soil-derived phenanthrene-degrading Acidovorax strains and proposal of Acidovorax carolinensis sp. nov.

Singleton, D. R., Lee, J., Dickey, A. N., Stroud, A., Scholl, E. H., Wright, F. A., & Aitken, M. D. (2018, June 8). Systematic and Applied Microbiology.

By: D. Singleton*, J. Lee*, A. Dickey n, A. Stroud*, E. Scholl n, F. Wright n, M. Aitken*

author keywords: Acidovorax; Phenanthrene; Polycyclic aromatic hydrocarbons
MeSH headings : Biodegradation, Environmental; Comamonadaceae / chemistry; Comamonadaceae / classification; Comamonadaceae / genetics; Comamonadaceae / physiology; DNA, Bacterial; Genes, Bacterial; Genome, Bacterial / genetics; Metabolic Networks and Pathways / genetics; North Carolina; Phenanthrenes / metabolism; Phylogeny; RNA, Ribosomal, 16S; Sequence Analysis, DNA; Soil Microbiology; Soil Pollutants / metabolism
topics (OpenAlex): Insect and Pesticide Research; Pesticide and Herbicide Environmental Studies; Microbial Natural Products and Biosynthesis
TL;DR: Four bacterial strains identified as members of the Acidovorax genus were isolated from two geographically distinct but similarly contaminated soils in North Carolina, USA, characterized, and their genomes sequenced, indicating that they likely represent a single species within the genus. (via Semantic Scholar)
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: Web Of Science
Added: October 16, 2018

2018 article

Population genetic diversity in zebrafish lines

Balik-Meisner, M., Truong, L., Scholl, E. H., Tanguay, R. L., & Reif, D. M. (2018, January 24). Mammalian Genome, Vol. 29, pp. 90–100.

Contributors: M. Balik-Meisner n, L. Truong*, E. Scholl n, R. Tanguay* & D. Reif n

MeSH headings : Animals; Gene Frequency; Genetic Variation; Genetics, Population; Genome / genetics; Polymorphism, Single Nucleotide / genetics; Zebrafish / genetics
topics (OpenAlex): Zebrafish Biomedical Research Applications; Genetic Mapping and Diversity in Plants and Animals; Genetic Associations and Epidemiology
TL;DR: T5D is established as a model that is representative of diversity levels within laboratory zebrafish lines and demonstrated that experimental design and analysis can exert major effects when characterizing genetic diversity in heterogeneous populations. (via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2018 journal article

no blokes Is Essential for Male Viability and X Chromosome Gene Expression in the Australian Sheep Blowfly

Current Biology, 28(12), 1987–1992.e3.

By: R. Davis n, E. Belikoff n, E. Scholl n, F. Li n & M. Scott n

MeSH headings : Animals; Diptera / genetics; Diptera / physiology; Dosage Compensation, Genetic / genetics; Female; Gene Expression; Genes, Insect / genetics; Genes, X-Linked / genetics; Male; X Chromosome / genetics
topics (OpenAlex): Vector-Borne Animal Diseases; Animal Behavior and Reproduction; Animal Genetics and Reproduction
TL;DR: This study supports the hypothesis on the origin of the Drosophila 4th chromosome and that a POF-like protein was required for normal gene expression on the ancient X chromosome and suggests that NBL could be important for X chromosome dosage compensation in L. cuprina. (via Semantic Scholar)
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UN Sustainable Development Goal Categories
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018

2016 article

Mitochondrial Genome Sequences and Structures Aid in the Resolution of Piroplasmida phylogeny

Schreeg, M. E., Marr, H. S., Tarigo, J. L., Cohn, L. A., Bird, D. M., Scholl, E. H., … Birkenheuer, A. J. (2016, November 10). PLoS ONE, Vol. 11.

By: M. Schreeg n, H. Marr n, J. Tarigo n, L. Cohn*, D. Bird n, E. Scholl n, M. Levy n, B. Wiegmann n, A. Birkenheuer n

Contributors: M. Schreeg n, H. Marr n, J. Tarigo n, L. Cohn*, D. Bird n, E. Scholl n, M. Levy n, B. Wiegmann n, A. Birkenheuer n

MeSH headings : DNA, Protozoan / genetics; Genome, Mitochondrial; Humans; Phylogeny; Piroplasmida / classification; Piroplasmida / genetics; Protozoan Infections / parasitology
topics (OpenAlex): Vector-borne infectious diseases; Insect symbiosis and bacterial influences; Mosquito-borne diseases and control
TL;DR: Phylogenetic analysis of concatenated mitochondrial and 18S sequences as well as cox1 amino acid sequence identified five distinct Piroplasmida groups, each of which possesses a unique mitochondrial genome structure. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018

2015 article

Comparative Genomic Analysis Identifies Divergent Genomic Features of Pathogenic Enterococcus cecorum Including a Type IC CRISPR-Cas System, a Capsule Locus, an epa-Like Locus, and Putative Host Tissue Binding Proteins

Borst, L. B., Suyemoto, M. M., Scholl, E. H., Fuller, F. J., & Barnes, H. J. (2015, April 10). PLoS ONE, Vol. 10.

By: L. Borst n, M. Suyemoto n, E. Scholl n, F. Fuller n & H. Barnes n

MeSH headings : Animals; Bacterial Proteins / chemistry; Bacterial Proteins / metabolism; CRISPR-Cas Systems / genetics; Chickens; Comparative Genomic Hybridization; Enterococcus / classification; Enterococcus / genetics; Enterococcus / isolation & purification; Evolution, Molecular; Genetic Loci; Genome, Bacterial; Genomics; Genotype; Phylogeny; Poultry Diseases / epidemiology; Poultry Diseases / microbiology; Virulence / genetics
topics (OpenAlex): Antimicrobial Resistance in Staphylococcus; Microbial infections and disease research; Biochemical and Structural Characterization
TL;DR: Specific genomic regions, coding sequences, and predicted proteins which may be related to the divergent evolution and increased virulence of emerging pathogenic strains of EC are identified and potential mediators of virulence identified. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2015 article

Relative Quantification and Higher-Order Modeling of the Plasma Glycan Cancer Burden Ratio in Ovarian Cancer Case-Control Samples

Hecht, E. S., Scholl, E. H., Walker, S. H., Taylor, A. D., Cliby, W. A., Motsinger-Reif, A. A., & Muddiman, D. C. (2015, September 8). Journal of Proteome Research.

By: E. Hecht*, E. Scholl*, S. Walker*, A. Taylor, W. Cliby*, A. Motsinger-Reif*, D. Muddiman*

author keywords: N-linked glycosylation; INLIGHT; ovarian cancer; relative quantification; cancer biomarker; human plasma
MeSH headings : Biomarkers, Tumor / blood; Carbohydrate Sequence; Case-Control Studies; Chromatography, Liquid / methods; Female; Fucose / blood; Glycosylation; Humans; Hydrazines / chemistry; Molecular Sequence Data; Neoplasm Staging; Ovarian Neoplasms / blood; Ovarian Neoplasms / diagnosis; Ovarian Neoplasms / pathology; Polysaccharides / blood; Sialic Acids / blood; Staining and Labeling / methods; Tandem Mass Spectrometry / methods
topics (OpenAlex): Glycosylation and Glycoproteins Research; Monoclonal and Polyclonal Antibodies Research; Lung Cancer Research Studies
TL;DR: For all N-glycans, the vectors of the effects from stages II-IV were sequentially reversed, suggesting potential biological changes in OVC morphology or in host response. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2013 article

A Novel Candidate Vaccine for Cytauxzoonosis Inferred from Comparative Apicomplexan Genomics

Tarigo, J. L., Scholl, E. H., Bird, D. M. K., Brown, C. C., Cohn, L. A., Dean, G. A., … Birkenheuer, A. J. (2013, August 20). PLoS ONE, Vol. 8.

By: J. Tarigo n, E. Scholl n, D. Bird n, C. Brown*, L. Cohn*, G. Dean n, M. Levy n, D. Doolan* ...

Contributors: J. Tarigo n, E. Scholl n, D. Bird n, C. Brown*, L. Cohn*, G. Dean n, M. Levy n, D. Doolan* ...

MeSH headings : Animals; Antigens, Protozoan / genetics; Antigens, Protozoan / immunology; Cat Diseases / immunology; Cat Diseases / parasitology; Cat Diseases / prevention & control; Cats; Cattle; Conserved Sequence; Genome, Protozoan; Genomics; Immune Sera / immunology; Piroplasmida / genetics; Piroplasmida / immunology; Protozoan Infections, Animal / immunology; Protozoan Infections, Animal / parasitology; Protozoan Infections, Animal / prevention & control; Protozoan Proteins / genetics; Protozoan Proteins / immunology; Protozoan Vaccines / genetics; Protozoan Vaccines / immunology; Recombinant Proteins / genetics; Recombinant Proteins / immunology; Synteny; Theileria parva / genetics; Theileria parva / immunology
topics (OpenAlex): Vector-borne infectious diseases; Viral Infections and Vectors; Mosquito-borne diseases and control
TL;DR: Comparative genomics is used to computationally and experimentally interpret the C. felis genome to identify a novel candidate vaccine antigen for cytauxzoonosis, and this approach emphasizes the use of comparative genomics as an accelerated path to developing vaccines against experimentally intractable pathogens. (via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2011 article

Computational and phylogenetic validation of nematode horizontal gene transfer

Scholl, E. H., & Bird, D. M. K. (2011, February 18). BMC Biology, Vol. 9.

By: E. Scholl n & D. Bird n

Contributors: E. Scholl n & D. Bird n

MeSH headings : Animals; Cellulase / genetics; Evolution, Molecular; Gene Transfer, Horizontal; Genes, Helminth; Molecular Sequence Data; Nematoda / classification; Nematoda / genetics; Phylogeny
topics (OpenAlex): Nematode management and characterization studies; Parasite Biology and Host Interactions; Entomopathogenic Microorganisms in Pest Control
TL;DR: A detailed phylogenetic analysis of cellulase genes in the free-living nematode Pristionchus pacificus at the species, genus and family levels substantiates the hypothesis that such transfer has been a driving force in the evolution of niche specificity. (via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2008 article

Sequence and genetic map of Meloidogyne hapla : A compact nematode genome for plant parasitism

Opperman, C. H., Bird, D. M., Williamson, V. M., Rokhsar, D. S., Burke, M., Cohn, J., … Windham, E. (2008, September 22). Proceedings of the National Academy of Sciences, Vol. 105, pp. 14802–14807.

By: C. Opperman n, D. Bird n, V. Williamson*, D. Rokhsar*, M. Burke n, J. Cohn n, J. Cromer n, S. Diener n ...

Contributors: C. Opperman n, D. Bird n, V. Williamson*, D. Rokhsar*, M. Burke n, J. Cohn n, J. Cromer n, S. Diener n ...

author keywords: compaction; dauer; development; horizontal gene transfer; gene
MeSH headings : Animals; Base Sequence; Caenorhabditis elegans / genetics; Chromosome Mapping; Evolution, Molecular; Gene Duplication; Gene Transfer, Horizontal; Genome, Helminth; Host-Parasite Interactions / genetics; Molecular Sequence Data; Multigene Family; Operon; Phylogeny; Plants / parasitology; Synteny; Tylenchoidea / genetics
topics (OpenAlex): Nematode management and characterization studies; Legume Nitrogen Fixing Symbiosis; Genetic and Environmental Crop Studies
TL;DR: Meloidogyne hapla is established as a tractable model plant-parasitic nematode amenable to forward and reverse genetics, and a complete genome sequence is presented that defines a platform to elucidate mechanisms of parasitism by what is the largest uncontrolled group of plant pathogens worldwide. (via Semantic Scholar)
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UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (OpenAlex)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2007 journal article

Comprehensive Transcriptome Profiling in Tomato Reveals a Role for Glycosyltransferase in Mi-Mediated Nematode Resistance

Plant Physiology, 144(2), 1079–1092.

By: J. Schaff n, D. Nielsen n, C. Smith n, E. Scholl n & D. Bird n

Contributors: J. Schaff n, D. Nielsen n, C. Smith n, E. Scholl n & D. Bird n

MeSH headings : Animals; Feeding Behavior / physiology; Gene Expression; Gene Expression Profiling; Gene Expression Regulation, Plant; Gene Silencing; Genomics; Glycosyltransferases / metabolism; Host-Parasite Interactions / physiology; Solanum lycopersicum / enzymology; Solanum lycopersicum / genetics; Solanum lycopersicum / parasitology; Oligonucleotide Array Sequence Analysis; Plant Roots / enzymology; Plant Roots / metabolism; Plant Roots / parasitology; Reproduction / physiology; Tylenchoidea / physiology
topics (OpenAlex): Nematode management and characterization studies; Legume Nitrogen Fixing Symbiosis; Studies on Chitinases and Chitosanases
TL;DR: The root transcriptome of the resistant and susceptible cultivars ‘Motelle’ and ‘Moneymaker’ is interrogated, providing a picture of global gene expression changes in roots during compatible and incompatible associations with RKN, and point to candidates for further investigation. (via Semantic Scholar)
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (OpenAlex)
Sources: Web Of Science, ORCID, NC State University Libraries, Crossref
Added: August 6, 2018

2005 article

Resolving tylenchid evolutionary relationships through multiple gene analysis derived from EST data

Scholl, E. H., & Bird, D. M. K. (2005, May 6). Molecular Phylogenetics and Evolution, Vol. 36, pp. 536–545.

By: E. Scholl n & D. Bird n

Contributors: E. Scholl n & D. Bird n

author keywords: Bayesian; Caenorhabditis elegans; COG; cyst nematode; orthologues; root-knot nematode
MeSH headings : Animals; Evolution, Molecular; Expressed Sequence Tags; Phylogeny; Selection, Genetic; Tylenchida / genetics
topics (OpenAlex): Nematode management and characterization studies; Plant Parasitism and Resistance; Legume Nitrogen Fixing Symbiosis
TL;DR: This EST-based multi-gene analysis is a first step towards accomplishing genome-wide coverage for tylenchid evolutionary analyses and reveals significant differences in selective pressure for some genes under some hypotheses, though all but one gene are exclusively under purifying selection. (via Semantic Scholar)
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (OpenAlex)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

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