Fred Wright

Stonebraker, J., Pace, R., Gallins, P., Dang, H., Aksit, M., Faino, A., … Knowles, M. (2024, March 27). Genetic variation in severe cystic fibrosis liver disease is associated with novel mechanisms for disease pathogenesis. HEPATOLOGY, Vol. 3. https://doi.org/10.1097/HEP.0000000000000863

Tsai, H.-H. D., House, J. S., Wright, F. A., Chiu, W. A., & Rusyn, I. (2023, April 20). A tiered testing strategy based on in vitro phenotypic and transcriptomic data for selecting representative petroleum UVCBs for toxicity evaluation in vivo. TOXICOLOGICAL SCIENCES. https://doi.org/10.1093/toxsci/kfad041

Sakolish, C., Moyer, H. L., Tsai, H.-H. D., Ford, L. C., Dickey, A. N., Wright, F. A., … Rusyn, I. (2023). Analysis of reproducibility and robustness of a renal proximal tubule microphysiological system OrganoPlate 3-lane 40 for in vitro studies of drug transport and toxicity. TOXICOLOGICAL SCIENCES. https://doi.org/10.1093/toxsci/kfad080

Cordova, A. C., Dodds, J. N., Tsai, H.-H. D., Lloyd, D. T., Roman-Hubers, A. T., Wright, F. A., … Rusyn, I. (2023, August 22). Application of Ion Mobility Spectrometry-Mass Spectrometry for Compositional Characterization and Fingerprinting of a Library of Diverse Crude Oil Samples. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY. https://doi.org/10.1002/etc.5727

Zhou, Y.-H., Gallins, P. J., Pace, R. G., Dang, H., Aksit, M. A., Blue, E. E., … Knowles, M. R. (2023). Genetic Modifiers of Cystic Fibrosis Lung Disease Severity. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, 207(10), 1324–1333. https://doi.org/10.1164/rccm.202209-1653OC

Cordova, A. C., Klaren, W. D., Ford, L. C., Grimm, F. A., Baker, E. S., Zhou, Y.-H., … Rusyn, I. (2023). Integrative Chemical-Biological Grouping of Complex High Production Volume Substances from Lower Olefin Manufacturing Streams. TOXICS, 11(7). https://doi.org/10.3390/toxics11070586

Ting, B. W. W., Wright, F. A., & Zhou, Y.-H. (2023, May 22). Simultaneous modeling of multivariate heterogeneous responses and heteroskedasticity via a two-stage composite likelihood. BIOMETRICAL JOURNAL. https://doi.org/10.1002/bimj.202200029

Rusyn, I., & Wright, F. A. (2023, December 23). Ten years of using key characteristics of human carcinogens to organize and evaluate mechanistic evidence in IARC Monographs on the identification of carcinogenic hazards to humans: Patterns and associations. TOXICOLOGICAL SCIENCES. https://doi.org/10.1093/toxsci/kfad134

Ford, L. C., Jang, S., Chen, Z., Zhou, Y.-H., Gallins, P. J., Wright, F. A., … Rusyn, I. (2022). A Population-Based Human In Vitro Approach to Quantify Inter-Individual Variability in Responses to Chemical Mixtures. TOXICS, 10(8). https://doi.org/10.3390/toxics10080441

Zhou, Y.-H., Gallins, P. J., Etheridge, A. S., Jima, D., Scholl, E., Wright, F. A., & Innocenti, F. (2022). A resource for integrated genomic analysis of the human liver. SCIENTIFIC REPORTS, 12(1). https://doi.org/10.1038/s41598-022-18506-z

Roman-Hubers, A. T., Cordova, A. C., Rohde, A. M., Chiu, W. A., McDonald, T. J., Wright, F. A., … Rusyn, I. (2022). Characterization of compositional variability in petroleum substances. FUEL, 317. https://doi.org/10.1016/j.fuel.2022.123547

Boysen, G., Rusyn, I., Chiu, W. A., & Wright, F. A. (2022). Characterization of population variability of 1,3-butadiene derived protein adducts in humans and mice. REGULATORY TOXICOLOGY AND PHARMACOLOGY, 132. https://doi.org/10.1016/j.yrtph.2022.105171

Mandal, M., Levy, J., Ives, C., Hwang, S., Zhou, Y.-H., Motsinger-Reif, A., … Edwards, S. (2022). Correlation Analysis of Variables From the Atherosclerosis Risk in Communities Study. FRONTIERS IN PHARMACOLOGY, 13. https://doi.org/10.3389/fphar.2022.883433

Ting, B., Wright, F., & Zhou, Y.-H. (2022, February 15). Fast Multivariate Probit Estimation via a Two-Stage Composite Likelihood. STATISTICS IN BIOSCIENCES, Vol. 2. https://doi.org/10.1007/s12561-022-09338-6

Jima, D. D., Skaar, D. A., Planchart, A., Motsinger-Reif, A., Cevik, S. E., Park, S. S., … Hoyo, C. (2022, June 25). Genomic map of candidate human imprint control regions: the imprintome. EPIGENETICS, Vol. 6. https://doi.org/10.1080/15592294.2022.2091815

House, J. S., Grimm, F. A., Klaren, W. D., Dalzell, A., Kuchi, S., Zhang, S.-D., … Wright, F. A. (2022). Grouping of UVCB Substances with Dose-Response Transcriptomics Data from Human Cell-Based Assays. ALTEX-ALTERNATIVES TO ANIMAL EXPERIMENTATION, 39(3), 388–404. https://doi.org/10.14573/altex.2107051

Harlow, C. E., Gandawijaya, J., Bamford, R. A., Martin, E.-R., Wood, A. R., Most, P. J., … Frayling, T. M. (2022). Identification and single-base gene-editing functional validation of a cis-EPO variant as a genetic predictor for EPO-increasing therapies. AMERICAN JOURNAL OF HUMAN GENETICS, 109(9), 1638–1652. https://doi.org/10.1016/j.ajhg.2022.08.004

Sun, Q., Liu, W., Rosen, J. D., Huang, L., Pace, R. G., Dang, H., … Li, Y. (2022). Leveraging TOPMed imputation server and constructing a cohort-specific imputation reference panel to enhance genotype imputation among cystic fibrosis patients. HUMAN GENETICS AND GENOMICS ADVANCES, 3(2). https://doi.org/10.1016/j.xhgg.2022.100090

Sun, Q., Yang, Y., Rosen, J. D., Jiang, M.-Z., Chen, J., Liu, W., … Li, Y. (2022). MagicalRsq: Machine-learning-based genotype imputation quality calibration. AMERICAN JOURNAL OF HUMAN GENETICS, 109(11), 1986–1997. https://doi.org/10.1016/j.ajhg.2022.09.009

Rusyn, I., Chiu, W. A., & Wright, F. A. (2022). Model systems and organisms for addressing inter- and intra-species variability in risk assessment. REGULATORY TOXICOLOGY AND PHARMACOLOGY, 132. https://doi.org/10.1016/j.yrtph.2022.105197

Aksit, M. A., Ling, H., Pace, R. G., Raraigh, K. S., Onchiri, F., Faino, A. V., … Blackman, S. M. (2022). Pleiotropic modifiers of age-related diabetes and neonatal intestinal obstruction in cystic fibrosis. AMERICAN JOURNAL OF HUMAN GENETICS, 109(10), 1894–1908. https://doi.org/10.1016/j.ajhg.2022.09.004

Bhandari, S., Casillas, G., Aly, N. A., Zhu, R., Newman, G., Wright, F. A., … Chiu, W. A. (2022). Spatial and Temporal Analysis of Impacts of Hurricane Florence on Criteria Air Pollutants and Air Toxics in Eastern North Carolina. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH, 19(3). https://doi.org/10.3390/ijerph19031757

Xia, K., Shabalin, A. A., Yin, Z., Chung, W., Sullivan, P. F., Wright, F. A., … Zou, F. (2022, June 11). TwinEQTL: ultrafast and powerful association analysis for eQTL and GWAS in twin studies. GENETICS. https://doi.org/10.1093/genetics/iyac088

Wang, M., Rivenbark, K., Gong, J., Wright, F. A., & Phillips, T. D. (2021). Application of Edible Montmorillonite Clays for the Adsorption and Detoxification of Microcystin. ACS APPLIED BIO MATERIALS, 4(9), 7254–7265. https://doi.org/10.1021/acsabm.1c00779

Roman-Hubers, A. T., Cordova, A. C., Aly, N. A., McDonald, T. J., Lloyd, D. T., Wright, F. A., … Rusyn, I. (2021). Data Processing Workflow to Identify Structurally Related Compounds in Petroleum Substances Using Ion Mobility Spectrometry-Mass Spectrometry. ENERGY & FUELS, 35(13), 10529–10539. https://doi.org/10.1021/acs.energyfuels.1c00892

Aly, N. A., Casillas, G., Luo, Y.-S., McDonald, T. J., Wade, T. L., Zhu, R., … Rusyn, I. (2021). Environmental impacts of Hurricane Florence flooding in eastern North Carolina: temporal analysis of contaminant distribution and potential human health risks. JOURNAL OF EXPOSURE SCIENCE AND ENVIRONMENTAL EPIDEMIOLOGY, 31(5), 810–822. https://doi.org/10.1038/s41370-021-00325-5

House, J. S., Grimm, F. A., Klaren, W. D., Dalzell, A., Kuchi, S., Zhang, S.-D., … Rusyn, I. (2021). Grouping of UVCB Substances with New Approach Methodologies (NAMs) Data. ALTEX-ALTERNATIVES TO ANIMAL EXPERIMENTATION, 38(1), 123–137. https://doi.org/10.14573/altex.2006262

Erber, L., Goodman, S., Wright, F. A., Chiu, W. A., Tretyakova, N. Y., & Rusyn, I. (2021). Intra- and Inter-Species Variability in Urinary N7-(1-Hydroxy-3-buten-2-yl)guanine Adducts Following Inhalation Exposure to 1,3-Butadiene. CHEMICAL RESEARCH IN TOXICOLOGY, 34(11), 2375–2383. https://doi.org/10.1021/acs.chemrestox.1c00291

Chen, Z., Jang, S., Kaihatu, J. M., Zhou, Y.-H., Wright, F. A., Chiu, W. A., & Rusyn, I. (2021). Potential Human Health Hazard of Post-Hurricane Harvey Sediments in Galveston Bay and Houston Ship Channel: A Case Study of Using In Vitro Bioactivity Data to Inform Risk Management Decisions. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH, 18(24). https://doi.org/10.3390/ijerph182413378

Luo, Y.-S., Chen, Z., Blanchette, A. D., Zhou, Y.-H., Wright, F. A., Baker, E. S., … Rusyn, I. (2021). Relationships between constituents of energy drinks and beating parameters in human induced pluripotent stem cell (iPSC)-Derived cardiomyocytes. FOOD AND CHEMICAL TOXICOLOGY, 149. https://doi.org/10.1016/j.fct.2021.111979

Chen, Z., Lloyd, D., Zhou, Y.-H., Chiu, W. A., Wright, F. A., & Rusyn, I. (2021). Risk Characterization of Environmental Samples Using In Vitro Bioactivity and Polycyclic Aromatic Hydrocarbon Concentrations Data. TOXICOLOGICAL SCIENCES, 179(1), 108–120. https://doi.org/10.1093/toxsci/kfaa166

Marvel, S. W., House, J. S., Wheeler, M., Song, K., Zhou, Y.-H., Wright, F. A., … Reif, D. M. (2021, January). The COVID-19 Pandemic Vulnerability Index (PVI) Dashboard: Monitoring County-Level Vulnerability Using Visualization, Statistical Modeling, and Machine Learning. https://doi.org/10.1289/EHP8690

Etheridge, A. S., Gallins, P. J., Jima, D., Broadaway, K. A., Ratain, M. J., Schuetz, E., … Innocenti, F. (2020). A New Liver Expression Quantitative Trait Locus Map From 1,183 Individuals Provides Evidence for Novel Expression Quantitative Trait Loci of Drug Response, Metabolic, and Sex-Biased Phenotypes. CLINICAL PHARMACOLOGY & THERAPEUTICS, 107(6), 1383–1393. https://doi.org/10.1002/cpt.1751

Mukherjee, R., Beykal, B., Szafran, A. T., Onel, M., Stossi, F., Mancini, M. G., … Pistikopoulos, E. N. (2020). Classification of estrogenic compounds by coupling high content analysis and machine learning algorithms. PLOS COMPUTATIONAL BIOLOGY, 16(9). https://doi.org/10.1371/journal.pcbi.1008191

House, J. S., Bouzos, E., Fahy, K. M., Francisco, V. M., Lloyd, D. T., Wright, F. A., … Wheeler, K. E. (2020). Low-Dose Silver Nanoparticle Surface Chemistry and Temporal Effects on Gene Expression in Human Liver Cells. SMALL, 16(21). https://doi.org/10.1002/smll.202000299

Rusyn, I., Chiu, W. A., & Wright, F. A. (2020, October). Questioning Existing Cancer Hazard Evaluation Standards in the Name of Statistics. https://doi.org/10.1093/toxsci/kfaa077

Chen, Z., Liu, Y., Wright, F. A., Chiu, W. A., & Rusyn, I. (2020). Rapid Hazard Characterization of Environmental Chemicals Using a Compendium of Human Cell Lines from Different Organs. ALTEX-ALTERNATIVES TO ANIMAL EXPERIMENTATION, 37(4), 623–638. https://doi.org/10.14573/altex.2002291

Song, K., Wright, F. A., & Zhou, Y.-H. (2020). Systematic Comparisons for Composition Profiles, Taxonomic Levels, and Machine Learning Methods for Microbiome-Based Disease Prediction. FRONTIERS IN MOLECULAR BIOSCIENCES, 7. https://doi.org/10.3389/fmolb.2020.610845

Aguet, F., Barbeira, A. N., Bonazzola, R., Brown, A., Castel, S. E., Jo, B., … Volpi, S. (2020). The GTEx Consortium atlas of genetic regulatory effects across human tissues. SCIENCE, 369(6509), 1318–1330. https://doi.org/10.1126/science.aaz1776

Miikherjee, R., Onel, M., Beykal, B., Szafran, A. T., Stossi, F., Mancini, M. A., … Pistikopoulos, E. N. (2019). Development of the Texas A&M Superfund Research Program Computational Platform for Data Integration, Visualization, and Analysis. 29TH EUROPEAN SYMPOSIUM ON COMPUTER AIDED PROCESS ENGINEERING, PT A, Vol. 46, pp. 967–972. https://doi.org/10.1016/B978-0-12-818634-3.50162-4

Onel, M., Beykal, B., Ferguson, K., Chiu, W. A., McDonald, T. J., Zhou, L., … Pistikopoulos, E. N. (2019). Grouping of complex substances using analytical chemistry data: A framework for quantitative evaluation and visualization. PLOS ONE, 14(10). https://doi.org/10.1371/journal.pone.0223517

Grimm, F. A., House, J. S., Wilson, M. R., Sirenko, O., Iwata, Y., Wright, F. A., … Rusyn, I. (2019). Multi-dimensional in vitro bioactivity profiling for grouping of glycol ethers. REGULATORY TOXICOLOGY AND PHARMACOLOGY, 101, 91–102. https://doi.org/10.1016/j.yrtph.2018.11.011

Lewis, L., Borowa-Mazgaj, B., Conti, A., Chappell, G. A., Luo, Y.-S., Bodnar, W., … Rusyn, I. (2019). Population-Based Analysis of DNA Damage and Epigenetic Effects of 1,3-Butadiene in the Mouse. CHEMICAL RESEARCH IN TOXICOLOGY, 32(5), 887–898. https://doi.org/10.1021/acs.chemrestox.9b00035

Luo, Y.-S., Cichocki, J. A., Hsieh, N.-H., Lewis, L., Wright, F. A., Threadgill, D. W., … Rusyn, I. (2019). Using Collaborative Cross Mouse Population to Fill Data Gaps in Risk Assessment: A Case Study of Population-Based Analysis of Toxicokinetics and Kidney Toxicodynamics of Tetrachloroethylene. ENVIRONMENTAL HEALTH PERSPECTIVES, 127(6). https://doi.org/10.1289/EHP5105

Grimm, F. A., Blanchette, A., House, J. S., Ferguson, K., Hsieh, N.-H., Dalaijamts, C., … Rusyn, I. (2018). A Human Population-Based Organotypic In Vitro Model for Cardiotoxicity Screening. ALTEX-ALTERNATIVES TO ANIMAL EXPERIMENTATION, 35(4), 441–452. https://doi.org/10.14573/altex.1805301

Frayling, T. M., Beaumont, R. N., Jones, S. E., Yaghootkar, H., Tuke, M. A., Ruth, K. S., … Zhou, Y. H. (2018). A common allele in FGF21 associated with sugar intake is associated with body shape, lower total body-fat percentage, and higher blood pressure. Cell Reports, 23(2), 327–336.

Polineni, D., Dang, H., Gallins, P. J., Jones, L. C., Pace, R. G., Stonebraker, J. R., … Zou, F. (2018). Airway mucosal host defense is key to genomic regulation of cystic fibrosis lung disease severity. American Journal of Respiratory and Critical Care Medicine, 197(1), 79–93.

Li, G., Shabalin, A. A., Rusyn, I., Wright, F. A., & Nobel, A. B. (2018). An empirical Bayes approach for multiple tissue eQTL analysis. Biostatistics (Oxford, England), 19(3), 391–406. https://doi.org/10.1093/biostatistics/kxx048

Zhou, Y.-H., Marron, J. S., & Wright, F. A. (2018). Computation of ancestry scores with mixed families and unrelated individuals. BIOMETRICS, 74(1), 155–164. https://doi.org/10.1111/biom.12708

Palowitch, J., Shabalin, A., Zhou, Y.-H., Nobel, A. B., & Wright, F. A. (2018). Estimation of cis-eQTL effect sizes using a log of linear model. BIOMETRICS, 74(2), 616–625. https://doi.org/10.1111/biom.12810

Li, G., Jima, D., Wright, F. A., & Nobel, A. B. (2018). HT-eQTL: integrative expression quantitative trait loci analysis in a large number of human tissues. BMC Bioinformatics, 19.

House, J. S., Mendez, M., Maguire, R. L., Gonzalez-Nahm, S., Huang, Z., Daniels, J., … Hoyo, C. (2018). Periconceptional maternal mediterranean diet is associated with favorable offspring behaviors and altered CpG methylation of imprinted genes. Frontiers in Cell and Developmental Biology, 6(SEP), 107. https://doi.org/10.3389/fcell.2018.00107

Singleton, D. R., Lee, J., Dickey, A. N., Stroud, A., Scholl, E. H., Wright, F. A., & Aitken, M. D. (2018). Polyphasic characterization of four soil-derived phenanthrene-degrading Acidovorax strains and proposal of Acidovorax carolinensis sp nov. SYSTEMATIC AND APPLIED MICROBIOLOGY, 41(5), 460–472. https://doi.org/10.1016/j.syapm.2018.06.001

Venkatratnam, A., House, J. S., Konganti, K., McKenney, C., Threadgill, D. W., Chiu, W. A., … Rusyn, I. (2018). Population-based dose-response analysis of liver transcriptional response to trichloroethylene in mouse. MAMMALIAN GENOME, 29(1-2), 168–181. https://doi.org/10.1007/s00335-018-9734-y

Marvel, S. W., To, K., Grimm, F. A., Wright, F. A., Rusyn, I., & Reif, D. M. (2018). ToxPi Graphical User Interface 2.0: Dynamic exploration, visualization, and sharing of integrated data models. BMC Bioinformatics, 19.

House, J. S., Grimm, F. A., Jima, D. D., Zhou, Y. H., Rusyn, I., & Wright, F. A. (2017). A Pipeline for high-throughput concentration response modeling of gene expression for toxicogenomics. Frontiers in Genetics, 8.

Rudra, P., Zhou, Y. H., & Wright, F. A. (2017). A procedure to detect general association based on concentration of ranks. Stat, 6(1), 88–101.

Chiu, W. A., Wright, F. A., & Rusyn, I. (2017). A tiered, Bayesian approach to estimating population variability for regulatory decision-making. Altex-Alternatives to Animal Experimentation, 34(3), 377–388.

Henriquez, A., House, J., Miller, D. B., Snow, S. J., Fisher, A., Ren, H., … Kodavanti, U. P. (2017). Adrenal-derived stress hormones modulate ozone-induced lung injury and inflammation. TOXICOLOGY AND APPLIED PHARMACOLOGY, 329, 249–258. https://doi.org/10.1016/j.taap.2017.06.009

Lee, S., Sun, W., Wright, F. A., & Zou, F. (2017). An improved and explicit surrogate variable analysis procedure by coefficient adjustment. BIOMETRIKA, 104(2), 303–316. https://doi.org/10.1093/biomet/asx018

Jansen, R., Hottenga, J.-J., Nivard, M. G., Abdellaoui, A., Laport, B., Geus, E. J., … Boomsma, D. I. (2017). Conditional eQTL analysis reveals allelic heterogeneity of gene expression. HUMAN MOLECULAR GENETICS, 26(8), 1444–1451. https://doi.org/10.1093/hmg/ddx043

Tan, M. H., Li, Q., Shanmugam, R., Piskol, R., Kohler, J., Young, A. N., … Li, J. B. (2017). Dynamic landscape and regulation of RNA editing in mammals. Nature, 550(7675), 249–254. https://doi.org/10.1038/NATURE24041

Venkatratnam, A., Furuya, S., Kosyk, O., Gold, A., Bodnar, W., Konganti, K., … Rusyn, I. (2017). Editor's Highlight: Collaborative Cross Mouse Population Enables Refinements to Characterization of the Variability in Toxicokinetics of Trichloroethylene and Provides Genetic Evidence for the Role of PPAR Pathway in Its Oxidative Metabolism. TOXICOLOGICAL SCIENCES, 158(1), 48–62. https://doi.org/10.1093/toxsci/kfx065

Liu, X., Finucane, H. K., Gusev, A., Bhatia, G., Gazal, S., O'Connor, L., … Price, A. L. (2017). Functional Architectures of Local and Distal Regulation of Gene Expression in Multiple Human Tissues. AMERICAN JOURNAL OF HUMAN GENETICS, 100(4), 605–616. https://doi.org/10.1016/j.ajhg.2017.03.002

Aguet, F., Brown, A. A., Castel, S. E., Davis, J. R., He, Y., Jo, B., … Zhou, Y.-H. (2017). Genetic effects on gene expression across human tissues. Nature, 550(7675), 204–213. https://doi.org/10.1038/NATURE24277

Aguet, F., Brown, A. A., Castel, S. E., Davis, J. R., He, Y., Jo, B., … Nedzel, J. L. (2017). Genetic effects on gene expression across human tissues. Nature, 550(7675), 204-.

Tukiainen, T., Villani, A.-C., Yen, A., Rivas, M. A., Marshall, J. L., Satija, R., … MacArthur, D. G. (2017). Landscape of X chromosome inactivation across human tissues. Nature, 550(7675), 244–248. https://doi.org/10.1038/NATURE24265

Li, X., Kim, Y., Tsang, E. K., Davis, J. R., Damani, F. N., Chiang, C., … Montgomery, S. B. (2017). The impact of rare variation on gene expression across tissues. Nature, 550(7675), 239–243. https://doi.org/10.1038/NATURE24267

Grimm, F. A., Iwata, Y., Sirenko, O., Chappell, G. A., Wright, F. A., Reif, D. M., … Rusyn, I. (2016). A chemical-biological similarity-based grouping of complex substances as a prototype approach for evaluating chemical alternatives. GREEN CHEMISTRY, 18(16), 4407–4419. https://doi.org/10.1039/c6gc01147k

Yang, J., Huang, T., Petralia, F., Long, Q., Zhang, B., Argmann, C., … Tu, Z. (2016). Erratum: Corrigendum: Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseases. Scientific Reports, 6(1), 19384. https://doi.org/10.1038/SREP19384

Jansen, R., Penninx, B. W. J. H., Madar, V., Xia, K., Milaneschi, Y., Hottenga, J. J., … Willemsen, G. (2016). Gene expression in major depressive disorder. Molecular Psychiatry, 21(3), 339–347.

Tian, X., Patel, K., Ridpath, J. R., Chen, Y. J., Zhou, Y. H., Neo, D., … Nakamura, J. (2016). Homologous recombination and translesion DNA synthesis play critical roles on tolerating DNA damage caused by trace levels of hexavalent chromium. PLoS One, 11(12).

Gusev, A., Ko, A., Shi, H., Bhatia, G., Chung, W., Penninx, B. W. J. H., … Pasaniuc, B. (2016). Integrative approaches for large-scale transcriptome-wide association studies. Nature Genetics, 48(3), 245–252. https://doi.org/10.1038/NG.3506

Gusev, A., Ko, A., Shi, H., Bhatia, G., Chung, W., Penninx, B. W. J. H., … Kahonen, M. (2016). Integrative approaches for large-scale transcriptome-wide association studies. Nature Genetics, 48(3), 245–252.

Theisen, C., & Williams, L. (2016). Poster: risk-based attack surface approximation. Symposium and Bootcamp on the Science of Security, 121–123.

Zhou, Y. H., & Wright, F. A. (2016). The projack: a resampling approach to correct for ranking bias in high-throughput studies. Biostatistics (Oxford, England), 17(1), 54–64.

Walter, V., Wright, F. A., & Nobel, A. B. (2015). Consistent testing for recurrent genomic aberrations. BIOMETRIKA, 102(4), 783–796. https://doi.org/10.1093/biomet/asv046

Jansen, R., Penninx, B. W. J. H., Madar, V., Xia, K., Milaneschi, Y., Hottenga, J. J., … Sullivan, P. F. (2015). Erratum: Gene expression in major depressive disorder. Molecular Psychiatry, 21(3), 444–444. https://doi.org/10.1038/MP.2015.94

Eduati, F., Mangravite, L. M., Wang, T., Tang, H., Bare, J. C., Huang, R., … Saez-Rodriguez, J. (2015). Erratum: Prediction of human population responses to toxic compounds by a collaborative competition. Nature Biotechnology, 33(10), 1109–1109. https://doi.org/10.1038/NBT1015-1109A

O’Neal, W. K., Gallins, P., Pace, R. G., Dang, H., Wolf, W. E., Jones, L. C., … Knowles, M. R. (2015). Gene Expression in Transformed Lymphocytes Reveals Variation in Endomembrane and HLA Pathways Modifying Cystic Fibrosis Pulmonary Phenotypes. The American Journal of Human Genetics, 96(2), 318–328. https://doi.org/10.1016/J.AJHG.2014.12.022

Jansen, R., Penninx, B. W. J. H., Madar, V., Xia, K., Milaneschi, Y., Hottenga, J. J., … Sullivan, P. F. (2015). Gene expression in major depressive disorder. Molecular Psychiatry, 21(3), 339–347. https://doi.org/10.1038/MP.2015.57

Corvol, H., Blackman, S. M., Boëlle, P.-Y., Gallins, P. J., Pace, R. G., Stonebraker, J. R., … Knowles, M. R. (2015). Genome-wide association meta-analysis identifies five modifier loci of lung disease severity in cystic fibrosis. Nature Communications, 6(1). https://doi.org/10.1038/NCOMMS9382

Corvol, H., Blackman, S. M., Boelle, P. Y., Gallins, P. J., Pace, R. G., Stonebraker, J. R., … Patrone, M. V. (2015). Genome-wide association meta-analysis identifies five modifier loci of lung disease severity in cystic fibrosis. Nature Communications, 6.

Zhou, Y.-H., & Wright, F. A. (2015). Hypothesis testing at the extremes: fast and robust association for high-throughput data. BIOSTATISTICS, 16(3), 611–625. https://doi.org/10.1093/biostatistics/kxv007

Rager, J. E., Tilley, S. K., Tulenko, S. E., Smeester, L., Ray, P. D., Yosim, A., … Fry, R. C. (2015). Identification of Novel Gene Targets and Putative Regulators of Arsenic-Associated DNA Methylation in Human Urothelial Cells and Bladder Cancer. Chemical Research in Toxicology, 28(6), 1144–1155. https://doi.org/10.1021/TX500393Y

Rager, J. E., Tilley, S. K., Tulenko, S. E., Smeester, L., Ray, P. D., Yosim, A., … Del Razo, L. M. (2015). Identification of novel gene targets and putative regulators of arsenic-associated DNA methylation in human urothelial cells and bladder cancer. Chemical Research in Toxicology, 28(6), 1144–1155.

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