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Fern Jessica Barkalow

Works (4)

Updated: March 14th, 2025 05:05

2025 journal article

Integrating AI-powered text mining from PubTator into the manual curation workflow at the Comparative Toxicogenomics Database

DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION, 2025.

By: T. Wiegers n, A. Davis n, J. Wiegers n, D. Sciaky n, F. Barkalow n, B. Wyatt n, M. Strong n, R. Mcmorran n, S. Abrar n, C. Mattingly n

topics (OpenAlex): Biomedical Text Mining and Ontologies; Genetics, Bioinformatics, and Biomedical Research; Bioinformatics and Genomic Networks
Sources: Web Of Science, NC State University Libraries
Added: March 10, 2025

2024 article

Comparative toxicogenomics database's 20th anniversary: update 2025

Davis, A. P., Wiegers, T. C., Sciaky, D., Barkalow, F., Strong, M., Wyatt, B., … Mattingly, C. J. (2024, October 10). NUCLEIC ACIDS RESEARCH, Vol. 10.

By: A. Davis n, T. Wiegers n, D. Sciaky n, F. Barkalow n, M. Strong n, B. Wyatt n, J. Wiegers n, R. McMorran n, S. Abrar n, C. Mattingly n

topics (OpenAlex): Biomedical Text Mining and Ontologies; Bioinformatics and Genomic Networks; Gene expression and cancer classification
Sources: Web Of Science, NC State University Libraries
Added: October 21, 2024

2024 journal article

Transforming environmental health datasets from the comparative toxicogenomics database into chord diagrams to visualize molecular mechanisms

FRONTIERS IN TOXICOLOGY, 6.

By: B. Wyatt n, A. Davis n, T. Wiegers n, J. Wiegers n, S. Abrar n, D. Sciaky n, F. Barkalow n, M. Strong n, C. Mattingly n

author keywords: data visualization; chord diagram; r; molecular mechanisms; environmental health; database; tetramers
topics (OpenAlex): Bioinformatics and Genomic Networks; Computational Drug Discovery Methods; Gene expression and cancer classification
Sources: Web Of Science, NC State University Libraries
Added: August 19, 2024

2023 journal article

CTD tetramers: a new online tool that computationally links curated chemicals, genes, phenotypes, and diseases to inform molecular mechanisms for environmental health

TOXICOLOGICAL SCIENCES, 195(2), 155–168.

By: A. Davis n, T. Wiegers n, J. Wiegers n, B. Wyatt n, R. Johnson n, D. Sciaky n, F. Barkalow n, M. Strong n, A. Planchart n, C. Mattingly n

author keywords: database tool; chemical-disease pathway; molecular mechanisms; environmental health; knowledge gaps; adverse outcome pathway
topics (OpenAlex): Health, Environment, Cognitive Aging; Bioinformatics and Genomic Networks; Computational Drug Discovery Methods
Sources: Web Of Science, NC State University Libraries
Added: April 1, 2024

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