@misc{brůna_aryal_dudchenko_sargent_mead_buti_cavallini_hytönen_andrés_pham_et al._2022, title={A chromosome-length genome assembly and annotation of blackberry (Rubus argutus, cv. ‘Hillquist’)}, url={http://dx.doi.org/10.1101/2022.04.28.489789}, DOI={10.1101/2022.04.28.489789}, abstractNote={Abstract}, publisher={Cold Spring Harbor Laboratory}, author={Brůna, Tomáš and Aryal, Rishi and Dudchenko, Olga and Sargent, Daniel James and Mead, Daniel and Buti, Matteo and Cavallini, Andrea and Hytönen, Timo and Andrés, Javier and Pham, Melanie and et al.}, year={2022}, month={Apr} } @article{brůna_aryal_dudchenko_sargent_mead_buti_cavallini_hytönen_andrés_pham_et al._2022, title={A chromosome-length genome assembly and annotation of blackberry (Rubus argutus, cv. “Hillquist”)}, volume={11}, ISSN={2160-1836}, url={http://dx.doi.org/10.1093/g3journal/jkac289}, DOI={10.1093/g3journal/jkac289}, abstractNote={Abstract Blackberries (Rubus spp.) are the fourth most economically important berry crop worldwide. Genome assemblies and annotations have been developed for Rubus species in subgenus Idaeobatus, including black raspberry (R. occidentalis), red raspberry (R. idaeus), and R. chingii, but very few genomic resources exist for blackberries and their relatives in subgenus Rubus. Here we present a chromosome-length assembly and annotation of the diploid blackberry germplasm accession “Hillquist” (R. argutus). “Hillquist” is the only known source of primocane-fruiting (annual-fruiting) in tetraploid fresh-market blackberry breeding programs and is represented in the pedigree of many important cultivars worldwide. The “Hillquist” assembly, generated using Pacific Biosciences long reads scaffolded with high-throughput chromosome conformation capture sequencing, consisted of 298 Mb, of which 270 Mb (90%) was placed on 7 chromosome-length scaffolds with an average length of 38.6 Mb. Approximately 52.8% of the genome was composed of repetitive elements. The genome sequence was highly collinear with a novel maternal haplotype-resolved linkage map of the tetraploid blackberry selection A-2551TN and genome assemblies of R. chingii and red raspberry. A total of 38,503 protein-coding genes were predicted, of which 72% were functionally annotated. Eighteen flowering gene homologs within a previously mapped locus aligning to an 11.2 Mb region on chromosome Ra02 were identified as potential candidate genes for primocane-fruiting. The utility of the “Hillquist” genome has been demonstrated here by the development of the first genotyping-by-sequencing-based linkage map of tetraploid blackberry and the identification of possible candidate genes for primocane-fruiting. This chromosome-length assembly will facilitate future studies in Rubus biology, genetics, and genomics and strengthen applied breeding programs.}, journal={G3 Genes|Genomes|Genetics}, publisher={Oxford University Press (OUP)}, author={Brůna, Tomáš and Aryal, Rishi and Dudchenko, Olga and Sargent, Daniel James and Mead, Daniel and Buti, Matteo and Cavallini, Andrea and Hytönen, Timo and Andrés, Javier and Pham, Melanie and et al.}, editor={Pyhäjärvi, TEditor}, year={2022}, month={Nov} } @article{willman_bushakra_bassil_finn_dossett_perkins-veazie_bradish_fernandez_weber_scheerens_et al._2022, title={Analysis of a Multi-Environment Trial for Black Raspberry (Rubus occidentalis L.) Quality Traits}, volume={13}, ISSN={2073-4425}, url={http://dx.doi.org/10.3390/genes13030418}, DOI={10.3390/genes13030418}, abstractNote={U.S. black raspberry (BR) production is currently limited by narrowly adapted, elite germplasm. An improved understanding of genetic control and the stability of pomological traits will inform the development of improved BR germplasm and cultivars. To this end, the analysis of a multiple-environment trial of a BR mapping population derived from a cross that combines wild ancestors introgressed with commercial cultivars on both sides of its pedigree has provided insights into genetic variation, genotype-by-environment interactions, quantitative trait loci (QTL), and QTL-by-environment interactions (QEI) of fruit quality traits among diverse field environments. The genetic components and stability of four fruit size traits and six fruit biochemistry traits were characterized in this mapping population following their evaluation over three years at four distinct locations representative of current U.S. BR production. This revealed relatively stable genetic control of the four fruit size traits across the tested production environments and less stable genetic control of the fruit biochemistry traits. Of the fifteen total QTL, eleven exhibited significant QEI. Closely overlapping QTL revealed the linkage of several fruit size traits: fruit mass, drupelet count, and seed fraction. These and related findings are expected to guide further genetic characterization of BR fruit quality, management of breeding germplasm, and development of improved BR cultivars for U.S. production.}, number={3}, journal={Genes}, publisher={MDPI AG}, author={Willman, Matthew R. and Bushakra, Jill M. and Bassil, Nahla and Finn, Chad E. and Dossett, Michael and Perkins-Veazie, Penelope and Bradish, Christine M. and Fernandez, Gina E. and Weber, Courtney A. and Scheerens, Joseph C. and et al.}, year={2022}, month={Feb}, pages={418} } @book{fernandez_2021, place={Raleigh, NC}, title={2021 PMSP for Blackberry in Alabama, Arkansas, Georgia, Louisiana, Mississippi, North Carolina, South Carolina, Tennessee and Virginia}, url={https://ipmdata.ipmcenters.org/source_report.cfm?view=yes&sourceid=1444}, institution={National IPM Database}, author={Fernandez, G.E.}, year={2021} } @article{chandra_oh_han_salinas_anciro_whitaker_chacon_fernandez_lee_2021, title={Comparative Transcriptome Analysis to Identify Candidate Genes for FaRCg1 Conferring Resistance Against Colletotrichum gloeosporioides in Cultivated Strawberry (Fragaria × ananassa)}, volume={12}, ISSN={1664-8021}, url={http://dx.doi.org/10.3389/fgene.2021.730444}, DOI={10.3389/fgene.2021.730444}, abstractNote={Colletotrichum}, journal={Frontiers in Genetics}, publisher={Frontiers Media SA}, author={Chandra, Saket and Oh, Youngjae and Han, Hyeondae and Salinas, Natalia and Anciro, Ashlee and Whitaker, Vance M. and Chacon, Jose Guillermo and Fernandez, Gina and Lee, Seonghee}, year={2021}, month={Aug} } @article{kraft_sit_diepenbrock_ashrafi_aryal_fernandez_burrack_2021, title={Detection of Fruit Meals Within Laboratory-Raised and Field-Trapped Adult Drosophila suzukii (Diptera: Drosophilidae) Guts}, volume={9}, ISSN={2296-701X}, url={http://dx.doi.org/10.3389/fevo.2021.719645}, DOI={10.3389/fevo.2021.719645}, abstractNote={The feeding habits of adult Brachycera are understudied and may provide important context for understanding invasive pest biology, as with the polyphagous small fruit pest Drosophila suzukii}, journal={Frontiers in Ecology and Evolution}, publisher={Frontiers Media SA}, author={Kraft, Laura J. and Sit, Tim L. and Diepenbrock, Lauren M. and Ashrafi, Hamid and Aryal, Rishi and Fernandez, Gina E. and Burrack, Hannah J.}, year={2021}, month={Aug} } @article{fernandez_pattison_perkins-veazie_ballington_clevinger_schiavone_gu_samtani_vinson_mcwhirt_et al._2020, title={'Liz' and 'Rocco' Strawberries}, volume={55}, ISSN={["2327-9834"]}, DOI={10.21273/HORTSCI14516-19}, number={4}, journal={HORTSCIENCE}, author={Fernandez, Gina and Pattison, Jeremy and Perkins-Veazie, Penelope and Ballington, James R. and Clevinger, Elizabeth and Schiavone, Rocco and Gu, Sanjun and Samtani, Jayesh and Vinson, Edgar and McWhirt, Amanda and et al.}, year={2020}, month={Apr}, pages={597–600} } @article{jacobs_adhikari_pattison_yencho_fernandez_louws_2020, title={Assessing Rate-Reducing Foliar Resistance to Anthracnose Crown Rot and Fruit Rot in Strawberry}, volume={104}, ISSN={0191-2917 1943-7692}, url={http://dx.doi.org/10.1094/PDIS-04-19-0687-RE}, DOI={10.1094/PDIS-04-19-0687-RE}, abstractNote={ Anthracnose fruit rot and anthracnose crown rot (ACR) caused by two species complexes of the fungus referred to as Colletotrichum acutatum and Colletotrichum gloeosporioides, respectively, are major pathogens of strawberry in North Carolina. Anthracnose epidemics are common when susceptible cultivars and asymptomatic planting stocks carrying quiescent Colletotrichum infection or hemibiotrophic infection (HBI) are planted. The main objective of this study was to assess resistance to HBI and ACR in strawberry. Strawberry cultivars and breeding lines were spray inoculated with isolates of C. acutatum or C. gloeosporioides. Four epidemiological parameters providing estimates of rate-reducing resistance to HBI and ACR in strawberry cultivars and lines were evaluated in repeated experiments in controlled environments in a greenhouse. HBI severity, measured as the percentage of total leaf area covered by acervuli, was estimated visually and by image analysis. ACR severity was rated weekly for wilt symptoms, and relative area under disease progress curve scores were calculated for comparing strawberry cultivars and lines. Significant differences (P ≤ 0.005) in HBI severity were found among strawberry genotypes; however, the correlations were not remarkable between Colletotrichum species (r = 0.4251). Although significant variation in resistance was observed for ACR, this was also weakly correlated (r = 0.2430) with resistance to C. gloeosporioides HBI. Overall, rate-reducing resistance to HBI and ACR in strawberry identified in this study could be utilized in breeding programs to develop durable resistance to anthracnose in North Carolina. }, number={2}, journal={Plant Disease}, publisher={Scientific Societies}, author={Jacobs, Raymond L. and Adhikari, Tika B. and Pattison, Jeremy and Yencho, G. Craig and Fernandez, Gina E. and Louws, Frank J.}, year={2020}, month={Feb}, pages={398–407} } @article{worthington_aryal_bassil_mead_fernandez_clark_fernández-fernández_finn_hummer_ashrafi_2020, title={Development of new genomic resources and tools for molecular breeding in blackberry}, volume={4}, ISSN={0567-7572 2406-6168}, url={http://dx.doi.org/10.17660/ActaHortic.2020.1277.6}, DOI={10.17660/ActaHortic.2020.1277.6}, number={1277}, journal={Acta Horticulturae}, publisher={International Society for Horticultural Science (ISHS)}, author={Worthington, M.L. and Aryal, R. and Bassil, N.V. and Mead, D. and Fernandez, G.E. and Clark, J.R. and Fernández-Fernández, F. and Finn, C.E. and Hummer, K.E. and Ashrafi, H.}, year={2020}, month={Apr}, pages={39–46} } @article{willman_bushakra_bassil_finn_dossett_perkins-veazie_bradish_fernandez_weber_scheerens_et al._2020, title={Genetic analysis of drupelet count in black raspberry (Rubus occidentalis)}, volume={4}, ISSN={0567-7572 2406-6168}, url={http://dx.doi.org/10.17660/ActaHortic.2020.1277.9}, DOI={10.17660/ActaHortic.2020.1277.9}, number={1277}, journal={Acta Horticulturae}, publisher={International Society for Horticultural Science (ISHS)}, author={Willman, M. and Bushakra, J.M. and Bassil, N.V. and Finn, C.E. and Dossett, M. and Perkins-Veazie, P. and Bradish, C.M. and Fernandez, G.E. and Weber, C.A. and Scheerens, J. and et al.}, year={2020}, month={Apr}, pages={65–72} } @article{kon_fernandez_perkins-veazie_blaedow_2020, title={Managing vigor of blackberry with prohexadione calcium: effects on primocane and floricane development}, volume={4}, ISSN={0567-7572 2406-6168}, url={http://dx.doi.org/10.17660/ActaHortic.2020.1277.47}, DOI={10.17660/ActaHortic.2020.1277.47}, number={1277}, journal={Acta Horticulturae}, publisher={International Society for Horticultural Science (ISHS)}, author={Kon, T.M. and Fernandez, G.E. and Perkins-Veazie, P. and Blaedow, K.}, year={2020}, month={Apr}, pages={329–336} } @article{finn_peterson_clark_fernandez_hall_worthington_2020, title={Merging blackberry germplasm pools and moving previously unutilized species into commercially viable selections}, volume={4}, ISSN={0567-7572 2406-6168}, url={http://dx.doi.org/10.17660/ActaHortic.2020.1277.7}, DOI={10.17660/ActaHortic.2020.1277.7}, number={1277}, journal={Acta Horticulturae}, publisher={International Society for Horticultural Science (ISHS)}, author={Finn, C.E. and Peterson, M.E. and Clark, J.R. and Fernandez, G.E. and Hall, H.K. and Worthington, M.L.}, year={2020}, month={Apr}, pages={47–54} } @article{bradish_bushakra_robbins_karaadac_teo_willard_perkins-veazie_lee_scheerens_weber_et al._2020, title={Standardized Phenotyping in Black Raspberry}, volume={74}, number={1}, journal={Journal of the American Pomological Society}, author={Bradish, C.M. and Bushakra, J.M. and Robbins, L.R. and Karaadac, E. and Teo, S. and Willard, J.L. and Perkins-Veazie, P. and Lee, J. and Scheerens, J.C. and Weber, C.A. and et al.}, year={2020}, month={Jan}, pages={2–17} } @misc{molina-bravo_worthington_fernandez_2019, title={Advances and challenges in raspberry and blackberry breeding}, volume={54}, ISBN={9781786762122}, ISSN={2059-6936}, url={http://dx.doi.org/10.19103/AS.2018.0040.27}, DOI={10.19103/AS.2018.0040.27}, journal={Achieving sustainable cultivation of temperate zone tree fruits and berries Volume 2: Case studies}, publisher={Burleigh Dodds Science Publishing}, author={Molina-Bravo, Ramón and Worthington, Margaret Leigh and Fernandez, Gina E.}, year={2019}, month={Jun}, pages={363–396} } @article{adhikari_chacon_fernandez_louws_2019, title={First Report of Anthracnose Causing Both Crown and Fruit Rot of Strawberry by Colletotrichum siamense in North Carolina}, volume={5}, ISSN={0191-2917 1943-7692}, url={http://dx.doi.org/10.1094/pdis-02-19-0314-pdn}, DOI={10.1094/pdis-02-19-0314-pdn}, journal={Plant Disease}, publisher={Scientific Societies}, author={Adhikari, T. B. and Chacon, J. G. and Fernandez, G. E. and Louws, F. J.}, year={2019}, month={May}, pages={PDIS-02–19-0314} } @article{jacobs_adhikari_pattison_yencho_fernandez_louws_2019, title={Inheritance of Resistance to Colletotrichum gloeosporioides and C. acutatum in Strawberry}, volume={109}, ISSN={0031-949X 1943-7684}, url={http://dx.doi.org/10.1094/PHYTO-08-18-0283-R}, DOI={10.1094/PHYTO-08-18-0283-R}, number={3}, journal={Phytopathology}, publisher={Scientific Societies}, author={Jacobs, Raymond L. and Adhikari, Tika B. and Pattison, Jeremy and Yencho, G. Craig and Fernandez, Gina E. and Louws, Frank J.}, year={2019}, month={Mar}, pages={428–435} } @article{samtani_rom_friedrich_fennimore_finn_petran_wallace_pritts_fernandez_chase_et al._2019, title={The Status and Future of the Strawberry Industry in the United States}, volume={29}, ISSN={1063-0198 1943-7714}, url={http://dx.doi.org/10.21273/HORTTECH04135-18}, DOI={10.21273/HORTTECH04135-18}, abstractNote={Strawberry (Fragaria}, number={1}, journal={HortTechnology}, publisher={American Society for Horticultural Science}, author={Samtani, Jayesh B. and Rom, Curt R. and Friedrich, Heather and Fennimore, Steven A. and Finn, Chad E. and Petran, Andrew and Wallace, Russell W. and Pritts, Marvin P. and Fernandez, Gina and Chase, Carlene A. and et al.}, year={2019}, month={Feb}, pages={11–24} } @article{jibran_spencer_fernandez_monfort_mnejja_dzierzon_tahir_davies_chagné_foster_et al._2019, title={Two Loci, RiAF3 and RiAF4, Contribute to the Annual-Fruiting Trait in Rubus}, volume={10}, ISSN={1664-462X}, url={http://dx.doi.org/10.3389/fpls.2019.01341}, DOI={10.3389/fpls.2019.01341}, journal={Frontiers in Plant Science}, publisher={Frontiers Media SA}, author={Jibran, Rubina and Spencer, Jessica and Fernandez, Gina and Monfort, Amparo and Mnejja, Mourad and Dzierzon, Helge and Tahir, Jibran and Davies, Kevin and Chagné, David and Foster, Toshi M. and et al.}, year={2019}, month={Oct} } @article{livingston_tuong_hoffman_fernandez_2018, title={Protocol for Producing Three-Dimensional Infrared Video of Freezing in Plants}, volume={9}, ISSN={1940-087X}, url={http://dx.doi.org/10.3791/58025}, DOI={10.3791/58025}, number={139}, journal={Journal of Visualized Experiments}, publisher={MyJove Corporation}, author={Livingston, David P., III and Tuong, Tan D. and Hoffman, Mark and Fernandez, Gina}, year={2018}, month={Sep} } @inbook{fernandez_molina-bravo_takeda_2018, title={What We Know About Heat Stress in Rubus}, ISBN={9783319990309 9783319990316}, url={http://dx.doi.org/10.1007/978-3-319-99031-6_3}, DOI={10.1007/978-3-319-99031-6_3}, booktitle={Raspberry}, publisher={Springer International Publishing}, author={Fernandez, Gina E. and Molina-Bravo, Ramon and Takeda, Fumiomi}, year={2018}, pages={29–40} } @article{perkins-veazie_ma_fernandez_bradish_bushakra_bassil_weber_scheerens_robbins_finn_et al._2016, title={Black raspberry fruit composition over two years from seedling populations grown at four US geographic locations}, volume={1133}, ISSN={0567-7572 2406-6168}, url={http://dx.doi.org/10.17660/actahortic.2016.1133.52}, DOI={10.17660/actahortic.2016.1133.52}, number={1133}, journal={Acta Horticulturae}, publisher={International Society for Horticultural Science (ISHS)}, author={Perkins-Veazie, P. and Ma, G. and Fernandez, G.E. and Bradish, C.M. and Bushakra, J.M. and Bassil, N.V. and Weber, C.A. and Scheerens, J.C. and Robbins, L. and Finn, C.E. and et al.}, year={2016}, month={May}, pages={335–338} } @article{bradish_overbaugh_ballington_fernandez_bassil_2016, title={Comparative diversity analysis of southeastern Rubus germplasm through molecular and pedigree techniques}, volume={1127}, ISSN={["2406-6168"]}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-85007394056&partnerID=MN8TOARS}, DOI={10.17660/actahortic.2016.1127.25}, journal={XXIX INTERNATIONAL HORTICULTURAL CONGRESS ON HORTICULTURE: SUSTAINING LIVES, LIVELIHOODS AND LANDSCAPES (IHC2014): INTERNATIONAL SYMPOSIUM ON PLANT BREEDING IN HORTICULTURE}, author={Bradish, C. M. and Overbaugh, E. and Ballington, J. and Fernandez, G. E. and Bassil, N. V.}, year={2016}, pages={157–161} } @article{beck_schroeder-moreno_fernandez_grossman_creamer_2016, title={Effects of Cover Crops, Compost, and Vermicompost on Strawberry Yields and Nitrogen Availability in North Carolina}, volume={26}, ISSN={["1943-7714"]}, DOI={10.21273/horttech03447-16}, number={5}, journal={HORTTECHNOLOGY}, author={Beck, John E. and Schroeder-Moreno, Michelle S. and Fernandez, Gina E. and Grossman, Julie M. and Creamer, Nancy G.}, year={2016}, month={Oct}, pages={604–613} } @article{bradish_fernandez_bushakra_perkins-veazie_dossett_bassil_finn_2016, title={Evaluation of vigor and winter hardiness of black raspberry breeding populations (Rubus occidentalis) grown in the southeastern US}, volume={1133}, ISSN={["2406-6168"]}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-84973606487&partnerID=MN8TOARS}, DOI={10.17660/actahortic.2016.1133.19}, number={1133}, journal={XI INTERNATIONAL RUBUS AND RIBES SYMPOSIUM}, publisher={International Society for Horticultural Science (ISHS)}, author={Bradish, C. M. and Fernandez, G. E. and Bushakra, J. M. and Perkins-Veazie, P. and Dossett, M. and Bassil, N. V. and Finn, C. E.}, year={2016}, pages={129–133} } @article{perkins-veazie_pattison_fernandez_ma_2016, title={Fruit Quality and Composition of Two Advanced North Carolina Strawberry Selections}, volume={16}, ISSN={["1553-8362"]}, DOI={10.1080/15538362.2016.1219289}, journal={INTERNATIONAL JOURNAL OF FRUIT SCIENCE}, author={Perkins-Veazie, Penelope and Pattison, Jeremy and Fernandez, Gina and Ma, Guoying}, year={2016}, pages={220–227} } @article{bradish_bushakra_dossett_bassil_finn_fernandez_2016, title={Genotyping and phenotyping heat tolerance in black raspberry (Rubus occidentalis L.)}, volume={1127}, ISSN={["2406-6168"]}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-85007373316&partnerID=MN8TOARS}, DOI={10.17660/actahortic.2016.1127.50}, number={1127}, journal={XXIX INTERNATIONAL HORTICULTURAL CONGRESS ON HORTICULTURE: SUSTAINING LIVES, LIVELIHOODS AND LANDSCAPES (IHC2014): INTERNATIONAL SYMPOSIUM ON PLANT BREEDING IN HORTICULTURE}, publisher={International Society for Horticultural Science (ISHS)}, author={Bradish, C. M. and Bushakra, J. M. and Dossett, M. and Bassil, N. V. and Finn, C. E. and Fernandez, G. E.}, year={2016}, pages={321–324} } @article{kim_perkins-veazie_fernandez_2016, title={Phenolic compounds and antioxidant capacity of organically grown fresh market blackberries}, volume={1133}, ISSN={["0567-7572"]}, DOI={10.17660/actahortic.2016.1133.55}, journal={XI INTERNATIONAL RUBUS AND RIBES SYMPOSIUM}, author={Kim, Moo Jung and Perkins-Veazie, P. and Fernandez, G. E.}, year={2016}, pages={353–356} } @book{fernandez_hummer_2016, title={Proceedings of the XI International Rubus and Ribes Symposium}, publisher={ISHS}, year={2016} } @article{bushakra_bradish_weber_dossett_fernandez_weiland_peterson_scheerens_robbins_serce_et al._2016, title={Toward understanding genotype x environment interactions in black raspberry (Rubus occidentalis L.)}, volume={1117}, ISSN={["0567-7572"]}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-84971528876&partnerID=MN8TOARS}, DOI={10.17660/actahortic.2016.1117.5}, number={1117}, journal={XXIX INTERNATIONAL HORTICULTURAL CONGRESS ON HORTICULTURE: SUSTAINING LIVES, LIVELIHOODS AND LANDSCAPES (IHC2014): II INTERNATIONAL BERRY FRUIT SYMPOSIUM: INTERACTIONS! LOCAL AND GLOBAL BERRY RESEARCH AND INNOVATION}, publisher={International Society for Horticultural Science (ISHS)}, author={Bushakra, J. M. and Bradish, C. M. and Weber, C. A. and Dossett, M. and Fernandez, G. and Weiland, J. and Peterson, M. and Scheerens, J. C. and Robbins, L. and Serce, S. and et al.}, year={2016}, pages={25–29} } @article{bradish_yousef_ma_perkins-veazie_fernandez_2015, title={Anthocyanin, carotenoid, tocopherol, and ellagitannin content of red raspberry cultivars grown under field or high tunnel cultivation in the Southeastern United States}, volume={140}, number={2}, journal={Journal of the American Society for Horticultural Science}, author={Bradish, C. M. and Yousef, G. G. and Ma, G. Y. and Perkins-Veazie, P. and Fernandez, G. E.}, year={2015}, pages={163–171} } @article{rysin_mcwhirt_fernandez_louws_schroeder-moreno_2015, title={Economic viability and environmental impact assessment of three different strawberry production systems in the Southeastern United States}, volume={25}, number={4}, journal={HortTechnology}, author={Rysin, O. and McWhirt, A. and Fernandez, G. and Louws, F. J. and Schroeder-Moreno, M.}, year={2015}, pages={585–594} } @article{kim_perkins-veazie_ma_fernandez_2015, title={Shelf life and changes in phenolic compounds of organically grown blackberries during refrigerated storage}, volume={110}, ISSN={["1873-2356"]}, DOI={10.1016/j.postharvbio.2015.08.020}, journal={POSTHARVEST BIOLOGY AND TECHNOLOGY}, author={Kim, Moo Jung and Perkins-Veazie, Penelope and Ma, Guoying and Fernandez, Gina}, year={2015}, month={Dec}, pages={257–263} } @article{bassil_gilmore_hummer_weber_dossett_agunga_rhodes_mockler_scheerens_filichkin_et al._2014, title={Genetic and Genomic Resources in Black Raspberry}, volume={8}, ISSN={0567-7572 2406-6168}, url={http://dx.doi.org/10.17660/actahortic.2014.1048.1}, DOI={10.17660/actahortic.2014.1048.1}, number={1048}, journal={Acta Horticulturae}, publisher={International Society for Horticultural Science (ISHS)}, author={Bassil, N. and Gilmore, B. and Hummer, K. and Weber, C. and Dossett, M. and Agunga, R. and Rhodes, E. and Mockler, T. and Scheerens, J.C. and Filichkin, S. and et al.}, year={2014}, month={Aug}, pages={19–24} } @article{molina-bravo_fernandez_sosinski_2014, title={Quantitative trait locus analysis of tolerance to temperature fluctuations in winter, fruit characteristics, flower color, and prickle-free canes in raspberry}, volume={33}, ISSN={["1572-9788"]}, DOI={10.1007/s11032-013-9947-4}, number={2}, journal={MOLECULAR BREEDING}, author={Molina-Bravo, Ramon and Fernandez, Gina E. and Sosinski, Bryon R.}, year={2014}, month={Feb}, pages={267–280} } @article{fernandez_ballington_perkins-veazie_2013, title={'Von' Thornless Blackberry}, volume={48}, ISSN={["0018-5345"]}, DOI={10.21273/hortsci.48.5.654}, number={5}, journal={HORTSCIENCE}, author={Fernandez, Gina E. and Ballington, James R. and Perkins-Veazie, Penelope}, year={2013}, month={May}, pages={654–656} } @article{burrack_fernandez_spivey_kraus_2013, title={Variation in selection and utilization of host crops in the field and laboratory by Drosophila suzukii Matsumara (Diptera: Drosophilidae), an invasive frugivore}, volume={69}, ISSN={["1526-4998"]}, DOI={10.1002/ps.3489}, number={10}, journal={PEST MANAGEMENT SCIENCE}, author={Burrack, Hannah J. and Fernandez, Gina E. and Spivey, Taylor and Kraus, Dylan A.}, year={2013}, month={Oct}, pages={1173–1180} } @inproceedings{fernandez_perkins-veazie_2013, title={Yield and postharvest attributes of caneberries grown under high tunnels and in the open field in North Carolina}, volume={987}, DOI={10.17660/actahortic.2013.987.12}, booktitle={International symposium on high tunnel horticultural crop production}, author={Fernandez, Gina and Perkins-Veazie, P.}, year={2013}, pages={89–98} } @article{bradish_perkins-veazie_fernandez_xie_jia_2012, title={Comparison of Flavonoid Composition of Red Raspberries (Rubus idaeus L.) Grown in the Southern United States}, volume={60}, ISSN={["1520-5118"]}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-84862185617&partnerID=MN8TOARS}, DOI={10.1021/jf203474e}, number={23}, journal={JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY}, author={Bradish, Christine M. and Perkins-Veazie, Penelope and Fernandez, Gina E. and Xie, Guoxiang and Jia, Wei}, year={2012}, month={Jun}, pages={5779–5786} } @article{molina-bravo_arellano_sosinski_fernandez_2011, title={A protocol to assess heat tolerance in a segregating population of raspberry using chlorophyll fluorescence}, volume={130}, ISSN={["1879-1018"]}, DOI={10.1016/j.scienta.2011.07.022}, number={3}, journal={SCIENTIA HORTICULTURAE}, author={Molina-Bravo, Ramon and Arellano, Consuelo and Sosinski, Bryon R. and Fernandez, Gina E.}, year={2011}, month={Sep}, pages={524–530} } @article{garland_schroeder-moreno_fernandez_creamer_2011, title={Influence of summer cover crops and mycorrhizal fungi on strawberry production in the Southeastern United States}, volume={46}, number={7}, journal={HortScience}, author={Garland, B. C. and Schroeder-Moreno, M. S. and Fernandez, G. E. and Creamer, N. G.}, year={2011}, pages={985–992} } @article{fernandez_ballington_2010, title={Performance of primocane-fruiting experimental blackberry cultivars in the Southern Appalachian Mountains}, volume={20}, number={6}, journal={HortTechnology}, author={Fernandez, G. E. and Ballington, J. R.}, year={2010}, pages={996–1000} } @article{fernandez_ballington_bryson_2009, title={'Nantahala' red raspberry}, volume={44}, number={1}, journal={HortScience}, author={Fernandez, G. E. and Ballington, J. R. and Bryson, S. J.}, year={2009}, pages={25–26} } @article{tzanetakis_guzman-baeny_vanesbroeck_fernandez_martin_2009, title={First Report of Impatiens necrotic spot virus in Blackberry in the Southeastern United States}, volume={93}, ISSN={["0191-2917"]}, DOI={10.1094/PDIS-93-4-0432A}, number={4}, journal={PLANT DISEASE}, author={Tzanetakis, I. E. and Guzman-Baeny, T. L. and VanEsbroeck, Z. P. and Fernandez, G. E. and Martin, R. R.}, year={2009}, month={Apr}, pages={432–432} } @article{ballington_fernandez_2008, title={Rubus breeding for the Southeastern United States}, volume={777}, journal={Acta Horticulturae}, author={Ballington, J.R. and Fernandez, G.E.}, year={2008}, pages={87–90} } @article{warmund_guinan_fernandez_2008, title={Temperatures and cold damage to small fruit crops across the eastern United States associated with the April 2007 freeze}, volume={43}, ISSN={["0018-5345"]}, DOI={10.21273/hortsci.43.6.1643}, number={6}, journal={HORTSCIENCE}, author={Warmund, Michele Renee and Guinan, Patrick and Fernandez, Gina}, year={2008}, month={Oct}, pages={1643–1647} } @article{leandro_guzman_ferguson_fernandez_louws_2007, title={Population dynamics of Trichoderma in fumigated and compost-amended soil and on strawberry roots}, volume={35}, ISSN={["1873-0272"]}, DOI={10.1016/j.apsoil.2006.04.008}, number={1}, journal={APPLIED SOIL ECOLOGY}, publisher={Elsevier BV}, author={Leandro, L. F. S. and Guzman, T. and Ferguson, L. M. and Fernandez, G. E. and Louws, F. J.}, year={2007}, month={Jan}, pages={237–246} } @article{leandro_ferguson_louws_fernandez_2007, title={Strawberry growth and productivity in fumigated compared to compost-amended production systems}, volume={42}, number={2}, journal={HortScience}, author={Leandro, L. F. S. and Ferguson, L. M. and Louws, F. J. and Fernandez, G. E.}, year={2007}, pages={227–231} } @article{sydorovych_safley_ferguson_poling_fernandez_brannen_monks_louws_2006, title={Economic evaluation of methyl bromide alternatives for the production of strawberries in the southeastern United States}, volume={16}, number={1}, journal={HortTechnology}, author={Sydorovych, O. and Safley, C. D. and Ferguson, L. M. and Poling, E. B. and Fernandez, G. E. and Brannen, P. A. and Monks, D. M. and Louws, F. J.}, year={2006}, pages={118–128} } @article{safley_boldea_fernandez_2006, title={Estimated costs of producing, harvesting, and marketing blackberries in the southeastern United States}, volume={16}, number={1}, journal={HortTechnology}, author={Safley, C. D. and Boldea, O. and Fernandez, G. E.}, year={2006}, pages={109–117} } @article{martin_tzanetakis_gergerich_fernández_pesic_2004, title={Blackberry yellow vein associated virus: A new crinivirus found in blackberry.}, volume={9}, ISSN={0567-7572 2406-6168}, url={http://dx.doi.org/10.17660/actahortic.2004.656.21}, DOI={10.17660/actahortic.2004.656.21}, number={656}, journal={Acta Horticulturae}, publisher={International Society for Horticultural Science (ISHS)}, author={Martin, R.R. and Tzanetakis, I.E. and Gergerich, R. and Fernández, G. and Pesic, Z.}, year={2004}, month={Sep}, pages={137–142} } @article{leandro_ferguson_fernandez_louws_2004, title={Evaluation of Trichoderma strains as biocontrol tools for integrated management of strawberry root rot}, ISBN={9290671708}, journal={Proceedings of a meeting of the WGs : management of plant diseases and arthropod pests by BCAs and their integration in agriculture systems at S. Michele all'Adige, Trentino, Italy, 9-13 June 2004}, publisher={Dijon, France : International Organization for Biological and Integrated Control of Noxious Animals and Plants, West Palaearctic Regional Section}, author={Leandro, L. and Ferguson, L. and Fernandez, G. and Louws, F.}, editor={Y. Elad, I. Pertot and Enkegaard, A.Editors}, year={2004} } @article{fernandez_ballington_2003, title={DOUBLE CROPPING OF STRAWBERRIES IN AN ANNUAL SYSTEM USING CONDITIONED PLUG PLANTS AND HIGH TUNNELS}, ISBN={["90-6605-300-3"]}, ISSN={0567-7572 2406-6168}, url={http://dx.doi.org/10.17660/actahortic.2003.614.81}, DOI={10.17660/actahortic.2003.614.81}, number={614}, journal={Acta Horticulturae}, publisher={International Society for Horticultural Science (ISHS)}, author={Fernandez, G.E. and Ballington, J.R.}, year={2003}, month={Sep}, pages={547–552} } @article{butler_fernandez_louws_2002, title={Strawberry plant growth parameters and yield among transplants of different types and from different geographic sources, grown in a plasticulture system}, volume={12}, number={1}, journal={HortTechnology}, author={Butler, L. M. and Fernandez, G. E. and Louws, F. J.}, year={2002}, pages={100–103} } @article{fernandez_2001, title={Fall-applied rowcovers enhance yield in plasticulture strawberries}, volume={11}, number={3}, journal={HortTechnology}, author={Fernandez, G. E.}, year={2001}, pages={440–444} } @article{fernandez_butler_louws_2001, title={Strawberry Growth and Development in an Annual Plasticulture System}, volume={36}, ISSN={0018-5345 2327-9834}, url={http://dx.doi.org/10.21273/hortsci.36.7.1219}, DOI={10.21273/hortsci.36.7.1219}, abstractNote={The growth and development of three strawberry cultivars commonly grown in a plasticulture system were documented. Strawberry plants were harvested monthly and divided by roots, crown, leaves, flowers, and fruit and then dried in an oven. The dry matter production and resource allocation proceeded along a predictable pattern of development. The establishment phase was characterized by an active period of growth of root, crown and leaves in the fall. Through the winter, the plants underwent slow growth, ending in a transition period in the late winter/early spring when resources were allocated to both vegetative and reproductive growth. In the spring, all plant parts received significantly increased allocation of, or redistribution of, resources. Cultivars of California origin, `Chandler' and `Camarosa', displayed similar trends in yield, dry matter production, seasonal resource allocation, and growth analysis variables throughout the season. `Sweet Charlie', a cultivar from Florida, showed lower dry matter accumulation and relative growth rate in the spring, higher harvest index and lower yield than the California cultivars.}, number={7}, journal={HortScience}, publisher={American Society for Horticultural Science}, author={Fernandez, Gina E. and Butler, Laura M. and Louws, Frank J.}, year={2001}, month={Dec}, pages={1219–1223} } @article{fernandez_pritts_1996, title={Carbon Supply Reduction has a Minimal Influence on Current Year's Red Raspberry (Rubus idaeus L.) Fruit Production}, volume={121}, ISSN={0003-1062 2327-9788}, url={http://dx.doi.org/10.21273/jashs.121.3.473}, DOI={10.21273/jashs.121.3.473}, abstractNote={A 2-year study was conducted to investigate the influence of the light environment on source-sink relationships in `Titan' red raspberry. Treatments imposed included flower and cane removal in conjunction with partial or whole canopy shading. Raspberry plants were remarkably resistant to a reduction in carbon supply. Yields and primocane production were maintained even when canopies were shaded. Furthermore, if raspberry plants were prevented from producing a full crop in one year, yields the following year tended to be higher than normal. These data, and other studies demonstrating that raspberry roots are strong carbon sinks, suggest that raspberry plants may rely on stored carbohydrate to mature the current crop of fruits when current photosynthate is inadequate. This trait is characteristic of some perennial species adapted to progressively changing environments, but may not be optimal for horticultural situations where growing conditions are relatively constant from year to year. A large root storage capacity and excessive primocane production likely contribute to the relatively low yields that are typical of this species.}, number={3}, journal={Journal of the American Society for Horticultural Science}, publisher={American Society for Horticultural Science}, author={Fernandez, Gina E. and Pritts, Marvin P.}, year={1996}, month={May}, pages={473–477} } @article{clark_irvin_fernandez_1994, title={Effects of Gibberellic Acid on Seed Traces of ‘Venus’ and ‘Saturn’ Grapes}, volume={2}, ISSN={1052-0015}, url={http://dx.doi.org/10.1300/j065v02n01_03}, DOI={10.1300/j065v02n01_03}, number={1}, journal={Journal of Small Fruit & Viticulture}, publisher={Informa UK Limited}, author={Clark, John R. and Irvin, Kelly M. and Fernandez, Gina E.}, year={1994}, month={Jan}, pages={11–19} } @article{fernandez_pritts_1994, title={Growth, Carbon Acquisition, and Source-Sink Relationships in `Titan' Red Raspberry}, volume={119}, ISSN={0003-1062 2327-9788}, url={http://dx.doi.org/10.21273/jashs.119.6.1163}, DOI={10.21273/jashs.119.6.1163}, abstractNote={Seasonal changes in growth, mean maximal photosynthetic rates, and the temperature and light response curves of `Titan' red raspberry (Rubus idaeus}, number={6}, journal={Journal of the American Society for Horticultural Science}, publisher={American Society for Horticultural Science}, author={Fernandez, Gina E. and Pritts, Marvin P.}, year={1994}, month={Nov}, pages={1163–1168} } @article{fernandez_pritts_1993, title={Growth and source-sink relationships in 'Titan' red raspberry}, volume={10}, ISSN={0567-7572 2406-6168}, url={http://dx.doi.org/10.17660/actahortic.1993.352.21}, DOI={10.17660/actahortic.1993.352.21}, number={352}, journal={Acta Horticulturae}, publisher={International Society for Horticultural Science (ISHS)}, author={Fernandez, Gina E. and Pritts, Marvin P.}, year={1993}, month={Oct}, pages={151–158} } @article{patten_neuendorff_nimr_clark_fernandez_1991, title={Cold Injury of Southern Blueberries as a Function of Germplasm and Season of Flower Bud Development}, volume={26}, ISSN={0018-5345 2327-9834}, url={http://dx.doi.org/10.21273/hortsci.26.1.18}, DOI={10.21273/hortsci.26.1.18}, abstractNote={The relative tolerance of flower buds and flowers of southern highbush blueberry (Vaccinium}, number={1}, journal={HortScience}, publisher={American Society for Horticultural Science}, author={Patten, Kim and Neuendorff, Elizabeth and Nimr, Gary and Clark, John R. and Fernandez, Gina}, year={1991}, month={Jan}, pages={18–20} } @article{fernandez_clark_moore_1991, title={Effect of Seedcoat Manipulation on the Germination of Stenospermocarpic Grape Embryos Cultured in Ovulo}, volume={26}, ISSN={0018-5345 2327-9834}, url={http://dx.doi.org/10.21273/hortsci.26.9.1220}, DOI={10.21273/hortsci.26.9.1220}, number={9}, journal={HortScience}, publisher={American Society for Horticultural Science}, author={Fernandez, Gina E. and Clark, John R. and Moore, J.N.}, year={1991}, month={Sep}, pages={1220} } @article{fernandez_clark_1991, title={In Vitro Propagation of the Erect Thornless `Navaho' Blackberry}, volume={26}, ISSN={0018-5345 2327-9834}, url={http://dx.doi.org/10.21273/hortsci.26.9.1219}, DOI={10.21273/hortsci.26.9.1219}, number={9}, journal={HortScience}, publisher={American Society for Horticultural Science}, author={Fernandez, Gina E. and Clark, John R.}, year={1991}, month={Sep}, pages={1219} }