Hamid Ashrafi

https://orcid.org/0000-0002-2094-2367

Breeding, Plant Breeding, Bioinformatics, Genetics, Cotton, Pepper, Tomato, Melon, Sponge Gourd

Works (92)

2020 article

Biomass yields, cytogenetics, fertility, and compositional analyses of novel bioenergy grass hybrids (Tripidium spp.)

GLOBAL CHANGE BIOLOGY BIOENERGY.

Sources: Web Of Science, ORCID
Added: April 6, 2020

2020 journal article

Simulated storage causes carbohydrate loss and rooting differences in two poinsettia cultivars

CANADIAN JOURNAL OF PLANT SCIENCE, 100(4), 459–462.

By: N. Jahnke, J. Dole & H. Ashrafi

Sources: Web Of Science, ORCID
Added: August 31, 2020

2019 journal article

3D point cloud data to quantitatively characterize size and shape of shrub crops

HORTICULTURE RESEARCH, 6.

By: Y. Jiang, C. Li, F. Takeda, E. Kramer, H. Ashrafi & J. Hunter

Sources: Web Of Science, ORCID
Added: July 15, 2019

2019 journal article

Sequencing-Based Bin Map Construction of a Tomato Mapping Population, Facilitating High-Resolution Quantitative Trait Loci Detection

PLANT GENOME, 12(1).

By: I. Gonda, H. Ashrafi, D. Lyon, S. Strickler, A. Hulse-Kemp, Q. Ma, H. Sun, K. Stoffel ...

Sources: Web Of Science, ORCID
Added: April 2, 2019

2018 journal article

Breeding Trait Priorities of the Blueberry Industry in the United States and Canada

HortScience, 53(7), 1021–1028.

By: R. Gallardo, Q. Zhang, M. Dossett, J. Polashock, C. Rodriguez-Saona, N. Vorsa, P. Edger, H. Ashrafi ...

Source: ORCID
Added: December 6, 2018

2018 speech

Developing the Genomic Resources for a Tetraploid Blueberry cv "O'Neal"

Aryal, R., Yow, A., & Ashrafi, H. (2018, August). Poster presented at the National Association of Plant Breeders 2018 Annual Meeting, Guelph Canada.

By: R. Aryal, A. Yow & H. Ashrafi

Event: National Association of Plant Breeders 2018 Annual Meeting at Guelph Canada

Source: NC State University Libraries
Added: November 1, 2018

2018 speech

Differential Gene Expression during Blueberry Fruits Ripening

Aryal, R., & Ashrafi, H. (2018, July). Poster presented at the Plant Biology 2018, Montreal, Quebec, Canada.

By: R. Aryal & H. Ashrafi

Event: Plant Biology 2018 at Montreal, Quebec, Canada

Source: NC State University Libraries
Added: November 1, 2018

2018 speech

Differential Gene Expression during Flower and Fruit Development of the Blueberry Cv. "O'Neal"

Aryal, R., Bostan, H., Yow, A. G., Tseng, E., Iorizzo, M., & Ashrafi, H. (Januaary 13-17, 2018Januaary 13-17, 2018). Poster presented at the Plant and Animal Genome XXVI Conference, San Diego CA.

By: R. Aryal, H. Bostan, A. Yow, E. Tseng, M. Iorizzo & H. Ashrafi

Event: Plant and Animal Genome XXVI Conference at San Diego CA

Source: NC State University Libraries
Added: November 1, 2018

2018 speech

Differential Gene Expression of Southern Highbush Blueberry cv. ‘O’Neal’ Floral Buds in Response to Freeze Treatment and Recovery Periods

Redpath, L. E., Yow, A. G., Aryal, R., Hulse-Kemp, A. M., Franks, R. G., Whetten, R., & Ashrafi, H. (2018, July). Poster presented at the American Society for Horticultural Science, Washington D.C.

By: L. Redpath, A. Yow, R. Aryal, A. Hulse-Kemp, R. Franks, R. Whetten, H. Ashrafi

Event: American Society for Horticultural Science at Washington D.C

Source: NC State University Libraries
Added: November 1, 2018

2018 speech

Differential Gene Expression of ‘O’Neal’ Blueberry Floral Buds in Response to Freeze Treatment and Recovery Periods

Redpath, L. E., & Ashrafi, H. (2018, April). Presented at the Genomic Science and Biomathematics Symposium, NC State University, Raleigh NC.

By: L. Redpath & H. Ashrafi

Event: Genomic Science and Biomathematics Symposium at NC State University, Raleigh NC

Source: NC State University Libraries
Added: November 1, 2018

2018 speech

Evaluation of Mechanically Harvested Southern Highbush Blueberries (Vaccinium corymbosum) Advanced Selections for Fresh Market

Redpath, L. E., Bland, T. W., Ballington, J. R., Jiang, Y., Li, C., & Ashrafi, H. (2018, July). Presented at the American Society for Horticultural Science, Washington D.C.

By: L. Redpath, T. Bland, J. Ballington, Y. Jiang, C. Li & H. Ashrafi

Event: American Society for Horticultural Science at Washington D.C

Source: NC State University Libraries
Added: November 1, 2018

2018 speech

Fruit Quality Related Trait Evaluation in a Segregating F1 Population of Blueberry from a Cross Between "Reveille" and "Arlen" Cultivars

Young, E., Redpath, L., Iorizzo, M., & Ashrafi, H. (2018, August). Poster presented at the National Association of Plant Breeders 2018 Annual Meeting, Guelph, Canada.

By: E. Young, L. Redpath, M. Iorizzo & H. Ashrafi

Event: National Association of Plant Breeders 2018 Annual Meeting at Guelph, Canada

Source: NC State University Libraries
Added: November 1, 2018

2018 journal article

Identification and Mapping of Late Blight Resistance Quantitative Trait Loci in Tomato Accession PI 163245

The Plant Genome, 0(0), 0.

By: E. Ohlson, H. Ashrafi & M. Foolad

Source: ORCID
Added: December 6, 2018

2018 speech

RNA-Seq Analysis of Floral Bud Response to Freeze Treatments in Southern Highbush Blueberry CV "O’Neal"

Redpath, L. E., Yow, A. G., Aryal, R., Hulse-Kemp, A. M., Franks, R. G., Whetten, R., & Ashrafi, H. (2018, August). Poster presented at the National Plant Breeders Association, Guelph Ontario, Canada August.

By: L. Redpath, A. Yow, R. Aryal, A. Hulse-Kemp, R. Franks, R. Whetten, H. Ashrafi

Event: National Plant Breeders Association at Guelph Ontario, Canada August

Source: NC State University Libraries
Added: November 1, 2018

2018 speech

Single Nucleotide Polymorphic (SNP) Marker Discovery in a Diverse Panel of Blueberry (Vaccinium sp.) Species

Young., E., Ballington, J. R., & Ashrafi, H. (2018, July). Presented at the American Society of Horticulture Sciences, Washington, D.C.

By: E. Young., J. Ballington & H. Ashrafi

Event: American Society of Horticulture Sciences at Washington, D.C

Source: NC State University Libraries
Added: November 1, 2018

2017 speech

Differential Gene Expression Analysis of Blueberry Cultivar “Arlen” in Response to Mummy Berry (Monilinia vaccinii-corymbosi) Disease Infection

Yow, A. G., Burchhardt, K., Rollins, J. A., Cubeta, M. A., & Ashrafi, H. (2017, September). Presented at the Plant Molecular Biology Consortium Retreat, Asheville, NC.

By: A. Yow, K. Burchhardt, J. Rollins, M. Cubeta & H. Ashrafi

Event: Plant Molecular Biology Consortium Retreat at Asheville, NC

Source: NC State University Libraries
Added: November 1, 2018

2017 journal article

Disease Resistance to Multiple Fungal and Oomycete Pathogens Evaluated Using a Recombinant Inbred Line Population in Pepper

Phytopathology, 107(12), 1522–1531.

By: R. Naegele, L. Granke, J. Fry, T. Hill, H. Ashrafi, A. Deynze, M. Hausbeck

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2017 speech

Identification of Candidate Genes for Mummy Berry Disease Resistance in Blueberry

Yow, A. G., Burchhardt, K., Cubeta, M. A., & Ashrafi, H. (2017, March). Poster presented at the NCSU Graduate Student Research Symposium, Raleigh, NC.

By: A. Yow, K. Burchhardt, M. Cubeta & H. Ashrafi

Event: NCSU Graduate Student Research Symposium at Raleigh, NC

Source: NC State University Libraries
Added: November 1, 2018

2017 speech

Identification of Candidate Genes for Mummy Berry Disease Resistance in Blueberry

Yow, A. G., Burchhardt, K., Cubeta, M. A., & Ashrafi, H. (2017, January). Poster presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XXV), San Diego, CA.

By: A. Yow, K. Burchhardt, M. Cubeta & H. Ashrafi

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XXV) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2017 journal article

Regions Underlying Population Structure and the Genomics of Organ Size Determination in

The Plant Genome, 10(3), 0.

By: T. Hill, J. Chunthawodtiporn, H. Ashrafi, K. Stoffel, A. Weir & A. Deynze

Source: ORCID
Added: December 6, 2018

2016 journal article

A HapMap leads to a Capsicum annuum SNP infinium array: a new tool for pepper breeding

Horticulture Research, 3(1), 16036.

By: A. Hulse-Kemp, H. Ashrafi, J. Plieske, J. Lemm, K. Stoffel, T. Hill, H. Luerssen, C. Pethiyagoda ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2016 journal article

A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution

Nature Genetics, 48(6), 657–666.

By: M. Iorizzo, S. Ellison, D. Senalik, P. Zeng, P. Satapoomin, J. Huang, M. Bowman, M. Iovene ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2016 journal article

DNA Sequence Evolution and Rare Homoeologous Conversion in Tetraploid Cotton

PLOS Genetics, 12(5), e1006012.

By: J. Page, Z. Liechty, R. Alexander, K. Clemons, A. Hulse-Kemp, H. Ashrafi, A. Deynze, D. Stelly, J. Udall

Ed(s): K. Bomblies

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2016 speech

Identification of Differentially Expressed Genes for Mummy Berry (Monilinia vaccinii-corymbosi) Resistance in Blueberry

Yow, A. G., Burchhardt, K., Cubeta, M. A., & Ashrafi, H. (2016, August). Poster presented at the Conference for the American Society for Horticultural Science (ASHS), Atlanta, GA.

By: A. Yow, K. Burchhardt, M. Cubeta & H. Ashrafi

Event: Conference for the American Society for Horticultural Science (ASHS) at Atlanta, GA

Source: NC State University Libraries
Added: November 1, 2018

2016 speech

Major CNV Detection by Read-Depth Analysis Using Capture-Based GBS in Cotton

Santiago, L. M. D., Hulse-Kemp, A. M., Resende, M., Neves, L. G., Ashrafi, H., Gill, C. A., & Stelly, D. M. (2016, January). Poster presented at the International Conference of Plant and Animal Genome Research (PAG XXIV), San Diego, CA.

By: L. Santiago, A. Hulse-Kemp, M. Resende, L. Neves, H. Ashrafi, C. Gill, D. Stelly

Event: International Conference of Plant and Animal Genome Research (PAG XXIV) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2016 journal article

New Insights on Eggplant/Tomato/Pepper Synteny and Identification of Eggplant and Pepper Orthologous QTL

Frontiers in Plant Science, 7.

By: R. Rinaldi, A. Deynze, E. Portis, G. Rotino, L. Toppino, T. Hill, H. Ashrafi, L. Barchi, S. Lanteri

Source: ORCID
Added: December 6, 2018

2016 speech

QTL Underlying Androgenic Haploid Production in Pepper (Capsicum annuum)

Hill, T., Afnan, K., Ray, T., Chaverri, A., Ashrafi, H., Deynze, A. V., & Bradford, K. (2016, January). Poster presented at the International Conference of Plant and Animal Genome Research (PAG XXIV), San Diego, CA.

By: T. Hill, K. Afnan, T. Ray, A. Chaverri, H. Ashrafi, A. Deynze, K. Bradford

Event: International Conference of Plant and Animal Genome Research (PAG XXIV) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2016 speech

Toward Deciphering of Mechanisms Underlying White Drupelet and Reversion Disorders of Blackberry

Fernandez, G., Carter, J. R., Yow, A. G., & Ashrafi, H. (2016, January). Poster presented at the International Conference of Plant and Animal Genome Research (PAG XXIV), San Diego, CA.

By: G. Fernandez, J. Carter, A. Yow & H. Ashrafi

Event: International Conference of Plant and Animal Genome Research (PAG XXIV) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2016 speech

Using RNA-Seq for the Identification of Candidate Genes for Mummy Berry Disease Resistance in Blueberry

Yow, A. G., Burchhardt, K., Cubeta, M. A., & Ashrafi, H. (2016, September). Presented at the Plant Molecular Biology Consortium Retreat, Wrightsville Beach, NC.

By: A. Yow, K. Burchhardt, M. Cubeta & H. Ashrafi

Event: Plant Molecular Biology Consortium Retreat at Wrightsville Beach, NC

Source: NC State University Libraries
Added: November 1, 2018

2015 journal article

A Long-Read Transcriptome Assembly of Cotton (Gossypium hirsutum L.) and Intraspecific Single Nucleotide Polymorphism Discovery

The Plant Genome, 8(2), 0.

By: H. Ashrafi, A. Hulse-Kemp, F. Wang, S. Yang, X. Guan, D. Jones, M. Matvienko, K. Mockaitis ...

Sources: NC State University Libraries, ORCID
Added: November 1, 2018

2015 journal article

BAC-End Sequence-Based SNP Mining in Allotetraploid Cotton (Gossypium) Utilizing Resequencing Data, Phylogenetic Inferences, and Perspectives for Genetic Mapping

G3&Amp;#58; Genes|Genomes|Genetics, 5(6), 1095–1105.

By: A. Hulse-Kemp, H. Ashrafi, K. Stoffel, X. Zheng, C. Saski, B. Scheffler, D. Fang, Z. Chen, A. Deynze, D. Stelly

Source: ORCID
Added: December 6, 2018

2015 journal article

Characterization of early blight resistance in a recombinant inbred line population of tomato: I. Heritability and trait correlations

Advanced Studies in Biology, 7, 131–148.

By: M. Foolad & H. Ashrafi

Sources: NC State University Libraries, ORCID
Added: November 6, 2018

2015 journal article

Characterization of early blight resistance in a recombinant inbred line population of tomato: II. Identification of QTLs and their co-localization with candidate resistance genes

Advanced Studies in Biology, 7, 149–168.

By: H. Ashrafi & M. Foolad

Source: ORCID
Added: December 6, 2018

2015 journal article

Detached-Leaflet Evaluation of Tomato Germplasm for Late Blight Resistance and Its Correspondence to Field and Greenhouse Screenings

Plant Disease, 99(5), 718–722.

By: M. Foolad, M. Sullenberger & H. Ashrafi

Source: ORCID
Added: December 6, 2018

2015 journal article

Development of a 63K SNP array for Gossypium and high-density mapping of intra- and inter-specific populations of cotton (G. hirsutum L)

G3 Gene| Genomes| Genetics, 5, 1187–1209.

By: A. Hulse-Kemp, J. Lemm, J. Plieske, H. Ashrafi & R. Buyyarapu

Source: NC State University Libraries
Added: November 1, 2018

2015 speech

Full-Length Transcriptome Sequencing Using PacBio Sequencing in Blueberry

Yow, A. G., Guo, W., & Ashrafi, H. (2015, November). Poster presented at the NCSU CALS Stewards of the Future Conference, Raleigh, NC.

By: A. Yow, W. Guo & H. Ashrafi

Event: NCSU CALS Stewards of the Future Conference at Raleigh, NC

Source: NC State University Libraries
Added: November 1, 2018

2015 journal article

Ultra-High Density, Transcript-Based Genetic Maps of Pepper Define Recombination in the Genome and Synteny Among Related Species

G3&Amp;#58; Genes|Genomes|Genetics, 5(11), 2341–2355.

By: T. Hill, H. Ashrafi, S. Chin-Wo, K. Stoffel, M. Truco, A. Kozik, R. Michelmore, A. Deynze

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2015 speech

Using spinach to compare technologies for whole genome assemblies

Presented at the Plant and Animal Genome XXIII Conference.

By: H. Ashrafi

Event: Plant and Animal Genome XXIII Conference

Source: NC State University Libraries
Added: November 6, 2018

2014 journal article

Cosegregates with QTL for Resistance to in Pepper ()

The Plant Genome, 7(2), 0.

By: W. Rehrig, H. Ashrafi, T. Hill, J. Prince & A. Deynze

Source: ORCID
Added: December 6, 2018

2014 speech

Deciphering Resistance to Phytophthora capsici in Pepper

Deynze, A. V., Hill, T., Ashrafi, H., Kozik, A., Chin-Wo, S. R., & Rehrig, W. Z. (2014, January). Poster presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XXI), San Diego, CA.

By: A. Deynze, T. Hill, H. Ashrafi, A. Kozik, S. Chin-Wo & W. Rehrig

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XXI) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2014 journal article

Development and bin mapping of gene-associated interspecific SNPs for cotton (Gossypium hirsutum L.) introgression breeding efforts

BMC Genomics, 15(1), 945.

By: A. Hulse-Kemp, H. Ashrafi, X. Zheng, F. Wang, K. Hoegenauer, A. Maeda, S. Yang, K. Stoffel ...

Source: ORCID
Added: December 6, 2018

2014 journal article

Genome sequence of the hot pepper provides insights into the evolution of pungency in Capsicum species

Nature Genetics, 46(3), 270–278.

By: S. Kim, M. Park, S. Yeom, Y. Kim, J. Lee, H. Lee, E. Seo, J. Choi ...

Sources: NC State University Libraries, ORCID
Added: November 6, 2018

2014 speech

Increasing Gossypium hirsutum Intraspecific SNPs via Genomic Sequencing

Deynze, A. V., Stelly, D., Ashrafi, H., Hulse, A. M., & Jones, D. C. (2014, January). Poster presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XXI), San Diego, CA.

By: A. Deynze, D. Stelly, H. Ashrafi, A. Hulse & D. Jones

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XXI) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2014 journal article

QTL Mapping of Fruit Rot Resistance to the Plant Pathogen Phytophthora capsici in a Recombinant Inbred Line Capsicum annuum Population

Phytopathology, 104(5), 479–483.

By: R. Naegele, H. Ashrafi, T. Hill, S. Chin-Wo, A. Deynze & M. Hausbeck

Source: ORCID
Added: December 6, 2018

2014 speech

SNP marker discovery for tomato breeding using Genotyping-by-Sequencing (GBS)

Ashrafi, H., Ohlson, E. W., Sullenberger, M. T., Stoffel, K., Masoudi, M., Deynze, A. V., & Foolad, M. (2014, September). Presented at the Tomato Breeders Round Table, NC State University, Fletcher, NC.

By: H. Ashrafi, E. Ohlson, M. Sullenberger, K. Stoffel, M. Masoudi, A. Deynze, M. Foolad

Event: Tomato Breeders Round Table, NC State University at Fletcher, NC

Source: NC State University Libraries
Added: November 1, 2018

2013 journal article

An Ultra-High-Density, Transcript-Based, Genetic Map of Lettuce

G3&Amp;#58; Genes|Genomes|Genetics, 3(4), 617–631.

By: M. Truco, H. Ashrafi, A. Kozik, H. Leeuwen, J. Bowers, S. Wo, K. Stoffel, H. Xu ...

Source: ORCID
Added: December 6, 2018

2013 journal article

Characterization of Capsicum annuum Genetic Diversity and Population Structure Based on Parallel Polymorphism Discovery with a 30K Unigene Pepper GeneChip

PLoS ONE, 8(2), e56200.

By: T. Hill, H. Ashrafi, S. Reyes-Chin-Wo, J. Yao, K. Stoffel, M. Truco, A. Kozik, R. Michelmore, A. Deynze

Ed(s): J. Zhang

Source: ORCID
Added: December 6, 2018

2013 speech

Genome-wide SNP Development and Validation for Intraspecific SNPs in Upland Cotton

Hulse, A. M., Hoegenauer, K. A., Ashrafi, H., Wang, F., Stelly, D., Deynze, A. V., … Jones, D. C. (2013, January). Poster presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XXI), San Diego, CA.

By: A. Hulse, K. Hoegenauer, H. Ashrafi, F. Wang, D. Stelly, A. Deynze, L. Hinze, J. Yu ...

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XXI) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2013 journal article

Identification of QTLs for capsaicinoids, fruit quality, and plant architecture-related traits in an interspecific Capsicum RIL population

Genome, 56(1), 61–74.

By: S. Yarnes, H. Ashrafi, S. Reyes-Chin-Wo, T. Hill, K. Stoffel & A. Deynze

Ed(s): P. Gulick

Source: ORCID
Added: December 6, 2018

2013 journal article

Insights into the Evolution of Cotton Diploids and Polyploids from Whole-Genome Re-sequencing

G3&Amp;#58; Genes|Genomes|Genetics, 3(10), 1809–1818.

By: J. Page, M. Huynh, Z. Liechty, K. Grupp, D. Stelly, A. Hulse, H. Ashrafi, A. Deynze, J. Wendel, J. Udall

Source: ORCID
Added: December 6, 2018

2013 speech

Resolving Tight Linkages Around Renlon by MAS for High-resolution Recombination in Chromosome-11

Zheng, X., Wang, F., Hoegenauer, K. A., Quintana, J., Ashrafi, H., Stelly, D., … Nichols, R. L. (2013, January). Poster presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XXI), San Diego, CA.

By: X. Zheng, F. Wang, K. Hoegenauer, J. Quintana, H. Ashrafi, D. Stelly, A. Bell, A. Deynze, D. Jones, R. Nichols

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XXI) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2013 article

Structural Genomics

Deynze, A. V., Hill, T., & Ashrafi, H. (2013, January). Genetics, Genomics, and Breeding of Tomato, pp. 327–344.

By: A. Deynze, T. Hill & H. Ashrafi

Source: ORCID
Added: December 6, 2018

2012 speech

Collaborative Development of SNPs for Cotton Research, Introgression, MAS and Breeding. Genome-Wide Gossypium SNP Development and Validation

Wang, F., Hulse, A. M., Hoegenauer, K., Stelly, D. M., Ashrafi, H., Deynze, A. V., & Yu, J. Z. (2012, January). Presented at the Cotton Improvement Conference, Beltwide Cotton Conferences. Retrieved from http://www.cotton.org/beltwide/index.cfm?page=beltwide_overview

By: F. Wang, A. Hulse, K. Hoegenauer, D. Stelly, H. Ashrafi, A. Deynze, J. Yu

Event: Cotton Improvement Conference, Beltwide Cotton Conferences

Source: NC State University Libraries
Added: November 1, 2018

2012 speech

Comparison and evaluation of cotton SNPs developed by transcriptome, genome reduction on restriction site conservation and RAD-based sequencing

Ashrafi, H. (2012, October). Presented at the International Cotton Genome Initiative (ICGI) Research Conference, Raleigh, North Carolina, USA.

By: H. Ashrafi

Event: International Cotton Genome Initiative (ICGI) Research Conference at Raleigh, North Carolina, USA

Source: NC State University Libraries
Added: November 1, 2018

2012 speech

Comparisons of high-density EST-based maps in pepper species

Hill, T., Ashrafi, H., Reyes-Chin-Wo, S., Romero, M. S., Kozik, A., & Deynze, A. V. (2012, January). Poster presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XX), San Diego, CA.

By: T. Hill, H. Ashrafi, S. Reyes-Chin-Wo, M. Romero, A. Kozik & A. Deynze

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XX) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2012 journal article

De novo assembly of the pepper transcriptome (Capsicum annuum): a benchmark for in silico discovery of SNPs, SSRs and candidate genes

BMC Genomics, 13(1), 571.

By: H. Ashrafi, T. Hill, K. Stoffel, A. Kozik, J. Yao, S. Chin-Wo, A. Deynze

Source: ORCID
Added: December 6, 2018

2012 journal article

Development and application of a 6.5 million feature Affymetrix Genechip® for massively parallel discovery of single position polymorphisms in lettuce (Lactuca spp.)

BMC Genomics, 13(1), 185.

By: K. Stoffel, H. Leeuwen, A. Kozik, D. Caldwell, H. Ashrafi, X. Cui, X. Tan, T. Hill ...

Source: ORCID
Added: December 6, 2018

2012 speech

Genome-Wide Gossypium SNP Development and Validation

Wang, F., Hulse, A. M., Hoegenauer, K., Stelly, D. M., Ashrafi, H., Deynze, A. V., & Yu, J. (2012, January). Presented at the Cotton Improvement Conference, Beltwide Cotton Conferences. Retrieved from http://www.cotton.org/beltwide/index.cfm?page=beltwide_overview

By: F. Wang, A. Hulse, K. Hoegenauer, D. Stelly, H. Ashrafi, A. Deynze, J. Yu

Event: Cotton Improvement Conference, Beltwide Cotton Conferences

Source: NC State University Libraries
Added: November 1, 2018

2012 speech

Genome-wide SNP development and validation for allotetraploid Gossypium

Hulse, A. M., Wang, F., Hoegenauer, K., Stelly, D. M., Ashrafi, H., Deynze, A. V., … Jones, D. C. (2012, January). Poster presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XX), San Diego, CA.

By: A. Hulse, F. Wang, K. Hoegenauer, D. Stelly, H. Ashrafi, A. Deynze, J. Yu, J. Chen, J. Udall, D. Jones

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XX) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2012 speech

Genome-wide SNP discovery from de novo assemblies of pepper (Capsicum annuum) transcriptomes

Ashrafi, H., Yao, J., Stoffel, K., Reyes-Chin-Wo, S., Hill, T., Kozik, A., & Van Deynze, A. (2012, January). Poster presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XX), San Diego, CA.

By: H. Ashrafi, J. Yao, K. Stoffel, S. Reyes-Chin-Wo, T. Hill, A. Kozik, A. Van Deynze

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XX) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2012 journal article

Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres

Nature, 492(7429), 423–427.

By: A. Paterson, J. Wendel, H. Gundlach, H. Guo, J. Jenkins, D. Jin, D. Llewellyn, K. Showmaker ...

Source: ORCID
Added: December 6, 2018

2012 journal article

Selective genotyping to identify late blight resistance genes in an accession of the tomato wild species Solanum pimpinellifolium

Euphytica, 187(1), 63–75.

By: H. Merk, H. Ashrafi & M. Foolad

Source: ORCID
Added: December 6, 2018

2012 journal article

Uniform ripening Encodes a Golden 2-like Transcription Factor Regulating Tomato Fruit Chloroplast Development

Science, 336(6089), 1711–1715.

By: A. Powell, C. Nguyen, T. Hill, K. Cheng, R. Figueroa-Balderas, H. Aktas, H. Ashrafi, C. Pons ...

Source: ORCID
Added: December 6, 2018

2011 speech

An Integrated approach to breeding resistance to Phytophthora capsici In Pepper

Deynze, A. V., Hill, T. A., Yarnes, S., Rehrig, W. Z., Chin-Wo, S. R., Ashrafi, H., … Prince, J. (2011, January). Poster presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XIX), San Diego, CA.

By: A. Deynze, T. Hill, S. Yarnes, W. Rehrig, S. Chin-Wo, H. Ashrafi, R. Adamchak, A. Kozik, J. Prince

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XIX) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2011 speech

Comparisons of high-density EST-based maps in pepper species

Hill, T., Ashrafi, H., Chin-Wo, S. R.-, Romero, M. S., Deynze, A. V., & Kozik, A. (Aug. 6-10, 2011Aug. 6-10, 2011). Presented at the Plant Biology, American Society of Plant Biologists, Minneapolis, MN.

By: T. Hill, H. Ashrafi, S. Chin-Wo, M. Romero, A. Deynze & A. Kozik

Event: Plant Biology, American Society of Plant Biologists at Minneapolis, MN

Source: NC State University Libraries
Added: November 1, 2018

2011 journal article

De novo assembly and characterization of the carrot transcriptome reveals novel genes, new markers, and genetic diversity

BMC Genomics, 12(1).

By: M. Iorizzo, D. Senalik, D. Grzebelus, M. Bowman, P. Cavagnaro, M. Matvienko, H. Ashrafi, A. Deynze, P. Simon

Source: ORCID
Added: December 6, 2018

2011 speech

Development and Application of Genomic Tools in Pepper

Deynze, A. V., Hill, T., Prince, J., Yarnes, S., Chunthawodtiporn, J., Rehrig, W., … Kozik, A. (2011, January). Poster presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XIX), San Diego, CA.

By: A. Deynze, T. Hill, J. Prince, S. Yarnes, J. Chunthawodtiporn, W. Rehrig, S. Reyes-Chin-wo, H. Ashrafi, A. Kozik

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XIX) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2011 journal article

Identification of novel quantitative trait loci for increased lycopene content and other fruit quality traits in a tomato recombinant inbred line population

Molecular Breeding, 30(1), 549–567.

By: H. Ashrafi, M. Kinkade, H. Merk & M. Foolad

Source: ORCID
Added: December 6, 2018

2011 speech

The Genetic Map and Genome Sequencing of Lettuce

Deynze, A. V., Hill, T., Prince, J., Yarnes, S., Chunthawodtiporn, J., Rehrig, W., … Kozik, A. (2011, January). Poster presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XIX), San Diego, CA.

By: A. Deynze, T. Hill, J. Prince, S. Yarnes, J. Chunthawodtiporn, W. Rehrig, S. Reyes-Chin-wo, H. Ashrafi, A. Kozik

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XIX) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2010 speech

Ultra High Density EST-Based Maps Reveal Genome Differences Between C. frutescence And C. annuum

Hill, T., Ashrafi, H., Kozik, A., & Deynze, A. V. (2010, January). Poster presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XVIII), San Diego, CA.

By: T. Hill, H. Ashrafi, A. Kozik & A. Deynze

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XVIII) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2009 journal article

A new genetic linkage map of tomato based on a Solanum lycopersicum × S. pimpinellifolium RIL population displaying locations of candidate pathogen response genes

Genome, 52(11), 935–956.

By: H. Ashrafi, M. Kinkade & M. Foolad

Ed(s): P. Gulick

Source: ORCID
Added: December 6, 2018

2009 speech

Construction of an Ultra High Density Genetic Map of Lettuce using an Affymetrix GeneChip

Kozik, A., Leeuwen, H., Truco, M. J., Stoffel, K., McHale, L., Ashrafi, H., … Michelmore, R. W. (2009, January). Poster presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XVII), San Diego, CA.

By: A. Kozik, H. Leeuwen, M. Truco, K. Stoffel, L. McHale, H. Ashrafi, D. Lavelle, X. Cui, A. Deynze, R. Michelmore

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XVII) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2009 speech

Development and Utilization of a High Density 6.6 Million Feature Affymetrix GeneChip for Marker Discovery and Genotyping in Lettuce

Leeuwen, H., Stoffel, K., Truco, M. J., Ashrafi, H., Cui, X., Kozik, A., … Deynze, A. V. (2009, January). Poster presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XVII), San Diego, CA.

By: H. Leeuwen, K. Stoffel, M. Truco, H. Ashrafi, X. Cui, A. Kozik, R. Michelmore, A. Deynze

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XVII) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2009 speech

High-Density Mapping of the Lettuce Genome with SFP Markers in over 15,000 Unigenes

Leeuwen, H., Stoffel, K., Kozik, A., Cui, X., Ashrafi, H., McHale, L., … Michelmore, R. W. (2009, January). Presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XVII), San Diego, CA.

By: H. Leeuwen, K. Stoffel, A. Kozik, X. Cui, H. Ashrafi, L. McHale, D. Lavelle, G. Wong ...

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XVII) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2009 speech

The Application of a Whole Genome Pepper Array to Identify SFPs in a Diversity Panel

Ashrafi, H., Hill, T., Yao, J., Leeuwen, H., Michelmore, R., Kozik, A., & Deynze, A. V. (2009, January). Invited presentation in Solanaceae workshop presented at the International Conference on the Status of Plant and Animal Genome Research (PAG XVII), San Diego, CA.

By: H. Ashrafi, T. Hill, J. Yao, H. Leeuwen, R. Michelmore, A. Kozik, A. Deynze

Event: International Conference on the Status of Plant and Animal Genome Research (PAG XVII) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2009 speech

The Application of a Whole Genome Pepper Array to Solanaceae Crops

Hill, T., Ashrafi, H., Yao, J., Jong, W. D., Francis, D., Kozik, A., & Deynze, A. V. (2009, October). Presented at the Cologne, Germany.

By: T. Hill, H. Ashrafi, J. Yao, W. Jong, D. Francis, A. Kozik, A. Deynze

Event: at Cologne, Germany

Source: NC State University Libraries
Added: November 1, 2018

2008 journal article

A Solanum lycopersicum × Solanum pimpinellifolium Linkage Map of Tomato Displaying Genomic Locations of R-Genes, RGAs, and Candidate Resistance/Defense-Response ESTs

International Journal of Plant Genomics, 2008, 1–18.

By: A. Sharma, L. Zhang, D. Niño-Liu, H. Ashrafi & M. Foolad

Source: ORCID
Added: December 6, 2018

2008 journal article

Genetics, Genomics and Breeding of Late Blight and Early Blight Resistance in Tomato

Critical Reviews in Plant Sciences, 27(2), 75–107.

By: M. Foolad, H. Merk & H. Ashrafi

Source: ORCID
Added: December 6, 2018

2007 speech

HPLC and spectrophotometer analyses of fruit carotenoids In a Lycopersicon esculentum X L. pimpinellifolium RIL population reveals several new QTLs for lycopene content

Ashrafi, H., Kinkade, M. R., & Foolad, M. R. (2007, January). Presented at the The International Conference on the Status of Plant and Animal Genome Research, PAG XV, San Diego, CA.

By: H. Ashrafi, M. Kinkade & M. Foolad

Event: The International Conference on the Status of Plant and Animal Genome Research, PAG XV at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2007 speech

Identification and molecular mapping of a new dominant gene (Ph5) conferring broad-spectrum resistance against tomato late blight

Merk, H. L., Ashrafi, H., Kinkade, M. P., & Foolad, M. R. (2007, January). Presented at the The International Conference on the Status of Plant and Animal Genome Research, PAG XV, San Diego, CA.

By: H. Merk, H. Ashrafi, M. Kinkade & M. Foolad

Event: The International Conference on the Status of Plant and Animal Genome Research, PAG XV at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2006 speech

A molecular linkage map of tomato based on RFLP markers and candidate disease-resistance/defense-response genes in an F7 RIL population

Ashrafi, H., Lin, G. Y., & Foolad, M. R. (2006, March). Poster presented at the Graduate Research Exposition, College of Ag. Sciences, The Pennsylvania State University, University Park, PA.

By: H. Ashrafi, G. Lin & M. Foolad

Event: Graduate Research Exposition, College of Ag. Sciences, The Pennsylvania State University at University Park, PA

Source: NC State University Libraries
Added: November 1, 2018

2006 speech

Identification of QTLs for tomato early blight resistance in a RIL population of a cross between Lycopersicon esculentum and L. pimpinellifolium

Ashrafi, H., Lin, G. Y., & Foolad, M. R. (2006, April). Poster presented at the Pennsylvania State University Genetics Symposium, University Park, PA.

By: H. Ashrafi, G. Lin & M. Foolad

Event: Pennsylvania State University Genetics Symposium at University Park, PA

Source: NC State University Libraries
Added: November 1, 2018

2006 conference paper

Identification of new sources of late blight resistance in tomato and mapping of a new resistance gene

Foolad, M. R., Merk, H. L., Ashrafi, H., & Kinkade, M. P. (Nov. 9-10, 2006). Proc. 21st Annual Tomato Disease Workshop. Fletcher, NC: NC State University.

By: M. Foolad, H. Merk, H. Ashrafi & M. Kinkade

Source: NC State University Libraries
Added: November 1, 2018

2006 speech

Mapping of early blight resistance QTLs and candidate resistance genes in a RIL population of tomato

Ashrafi, H., Sharma, A., Kole, C., Merk, H., Lin, G. Y., & Foolad, M. R. (2006, January). Poster presented at the The XIV International Conference on the Status of Plant and Animal Genome Research (PAG XIV), San Diego, CA.

By: H. Ashrafi, A. Sharma, C. Kole, H. Merk, G. Lin & M. Foolad

Event: The XIV International Conference on the Status of Plant and Animal Genome Research (PAG XIV) at San Diego, CA

Source: NC State University Libraries
Added: November 1, 2018

2006 speech

Toward identification and mapping of new late blight resistance genes in tomato

Merk, H. L., Ashrafi, H., Kole, C., Kinkade, M., Lin, G. Y., & Foolad, M. R. (2006, April). Poster presented at the 2006 Pennsylvania State University Genetics Symposium, University Park, PA.

By: H. Merk, H. Ashrafi, C. Kole, M. Kinkade, G. Lin & M. Foolad

Event: 2006 Pennsylvania State University Genetics Symposium at University Park, PA

Source: NC State University Libraries
Added: November 1, 2018

2005 journal article

(13) Comparative Mapping of Early Blight Resistance QTLs and Candidate Resistance Genes in F2, F3, F4 and a RIL Population of Tomato

HortScience, 40(4), 1040.

By: H. Ashrafi, A. Sharma, D. Niño-Liu, L. Zhang & M. Foolad

Source: NC State University Libraries
Added: November 1, 2018

2005 speech

Comparative mapping of early blight resistance QTLs and candidate resistance genes in F2, F3, F4 and a RIL population of Tomato

Poster presented at the 2005 ASHS Annual International Conference, Las Vegas.

By: H. Ashrafi, A. Sharma, D. Niño-Liu, L. Zhang & M. Foolad

Event: 2005 ASHS Annual International Conference at Las Vegas

Source: NC State University Libraries
Added: November 1, 2018

2005 speech

Genetic mapping of candidate resistance genes in tomato using an F2 and a RIL population of a Lycopersicon esculentum × L. pimpinellifolium cross

Ashrafi, H., Sharma, A., Niño-Liu, D., & Foolad, M. R. (2005, March). Presented at the Graduate Research Exposition, College of Agricultural Sciences, The Pennsylvania State University, University Park, PA.

By: H. Ashrafi, A. Sharma, D. Niño-Liu & M. Foolad

Event: Graduate Research Exposition, College of Agricultural Sciences, The Pennsylvania State University at University Park, PA

Source: NC State University Libraries
Added: November 1, 2018

2005 journal article

Genetics and Breeding of Early Blight Resistance in Tomato

HortScience, 40, 1114–1114.

By: M. Foolad, A. Sharma, H. Ashrafi & G. Lin

Source: NC State University Libraries
Added: November 1, 2018

2005 speech

Genetics of early blight resistance in tomato

Sharma, A., Ashrafi, H., & Foolad, M. R. (2005, January). Poster presented at the The International Conference on the Status of Plant and Animal Genome Research, PAG XIII, San Diego.

By: A. Sharma, H. Ashrafi & M. Foolad

Event: The International Conference on the Status of Plant and Animal Genome Research, PAG XIII at San Diego

Source: NC State University Libraries
Added: November 1, 2018

2004 speech

Early blight resistance in tomato: genetics, breeding and accelerated breeding

R., F. M., Sharma, A., & Ashrafi, H. (2004, June). Poster presented at the First International Symposium in Tomato Diseases (ISTD) and 19th Annual Tomato Disease Workshop (ATDW), Orlando, FL.

By: F. R., A. Sharma & H. Ashrafi

Event: First International Symposium in Tomato Diseases (ISTD) and 19th Annual Tomato Disease Workshop (ATDW) at Orlando, FL

Source: NC State University Libraries
Added: November 1, 2018

2003 journal article

MOLECULAR CHARACTERIZATION OF OLIVE GERMPLASM IN IRAN BY USE OF RANDOM AMPLIFIED POLYMORPHIC DNA (RAPD) AND CORRELATION WITH PHENOTYPIC STUDIES: PRELIMINARY RESULTS

Acta Horticulturae, 7(623), 169–175.

By: S. Samaee, Z. Shobbar, H. Ashrafi, M. Hosseini-Mazinani & M. Sheidai

Source: ORCID
Added: December 6, 2018

Employment

2015 - present

North Carolina State University Raleigh, NC, US
Assistant Professor Horticultural Science

2008 - 2015

University of California Davis Davis, CA, US
Bioinformatics Scientist Plant Sciences

Education

2007 - 2008

Pennsylvania State University Penn State World Campus University Park, PA, US
PhD Genetics Plant Sciences