Works (61)

Updated: December 2nd, 2024 12:40

2024 journal article

<i>IPD3</i>, a master regulator of arbuscular mycorrhizal symbiosis, affects genes for immunity and metabolism of non-host <i>Arabidopsis</i> when restored long after its evolutionary loss

PLANT MOLECULAR BIOLOGY, 114(2).

By: E. Hornstein n, M. Charles n, M. Franklin n, B. Edwards n, S. Vintila n, M. Kleiner n, H. Sederoff n

author keywords: Mycorrhizae; Symbiosis; Non-mycorrhizal; Genetic engineering; Systems biology; Plant transcriptomics
TL;DR: Interestingly, the effect of expressing IPD3 in Arabidopsis and knocking it out in Lotus was strongest in plants not exposed to AMF, which is revealed to be due to changes in IPD3 genotype causing a transcriptional state, which partially mimics AMF exposure in non-inoculated plants. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science; OpenAlex)
15. Life on Land (Web of Science)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: February 22, 2024

2024 article

Camelina CircRNA Landscape: Implications for Gene Regulation and Fatty Acid Metabolism

Utley, D., Edwards, B., Budnick, A., Grotewold, E., & Sederoff, H. (2024, July 3).

By: D. Utley, B. Edwards, A. Budnick, E. Grotewold & H. Sederoff*

Source: ORCID
Added: July 8, 2024

2024 article

Long- and short-read sequencing methods discover distinct circular RNA pools in <i>Lotus japonicus</i>

Budnick, A., Franklin, M. J., Utley, D., Edwards, B., Charles, M., Hornstein, E. D., & Sederoff, H. (2024, January 20). PLANT GENOME, Vol. 1.

By: A. Budnick n, M. Franklin n, D. Utley n, B. Edwards n, M. Charles n, E. Hornstein n, H. Sederoff n

TL;DR: This is the first identification of L. japonicus circRNA and provides a resource for further characterization of their function in gene regulation and the comparison of methodologies and technologies to sequence, identify, analyze, and validate circRNA from plant tissues will enable further research to characterize the function and biogenesis of circRNA in L. japonicus. (via Semantic Scholar)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: January 28, 2024

2023 article

Back to the Future: Re-Engineering the Evolutionarily Lost Arbuscular Mycorrhiza Host Trait to Improve Climate Resilience for Agriculture

Hornstein, E. D., & Sederoff, H. (2023, September 13). CRITICAL REVIEWS IN PLANT SCIENCES, Vol. 9.

By: E. Hornstein n & H. Sederoff n

author keywords: Agriculture; climate change; genetic engineering; microbiome; mycorrhizae; molecular biology; symbiosis; sustainability
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
15. Life on Land (Web of Science)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: September 15, 2023

2023 journal article

Emergent molecular traits of lettuce and tomato grown under wavelength-selective solar cells

FRONTIERS IN PLANT SCIENCE, 14.

By: M. Charles n, B. Edwards n, E. Ravishankar n, J. Calero n, R. Henry n, J. Rech*, C. Saravitz n, W. You* ...

author keywords: agrivoltaic; greenhouse; solar power; sustainability; gene networks; photosynthesis; photomorphogenesis
Sources: Web Of Science, NC State University Libraries
Added: April 11, 2023

2023 article

Exceptionally high genetic variance of the doubled haploid (DH) population of poplar

Liu, C., Wang, S., Liu, Y., Wang, M., Fan, E., Liu, C., … Qu, G. (2023, May 4). JOURNAL OF FORESTRY RESEARCH, Vol. 5.

By: C. Liu*, S. Wang*, Y. Liu*, M. Wang*, E. Fan*, C. Liu*, S. Zhang*, C. Yang* ...

author keywords: Populus; Anther culture; Doubled haploid; Genetic variance; Flow cytometry
TL;DR: This study provides an effective protocol for poplar haploid induction based on an anther culture method and shows that some excellent homozygous lines have the potential to be model plants in genetic and breeding studies. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: May 30, 2023

2023 article

Re-engineering a lost trait:IPD3, a master regulator of arbuscular mycorrhizal symbiosis, affects genes for immunity and metabolism of non-host Arabidopsis when restored long after its evolutionary loss

Hornstein, E. D., Charles, M., Franklin, M., Edwards, B., Vintila, S., Kleiner, M., & Sederoff, H. (2023, March 7).

TL;DR: Despite the long interval since loss of AM and IPD3 in Arabidopsis, molecular connections to symbiosis machinery remain in place in this nonAM species, with implications for both basic science and the prospect of engineering this trait for agriculture. (via Semantic Scholar)
Source: ORCID
Added: March 8, 2023

2022 journal article

Gene sdaB Is Involved in the Nematocidal Activity of Enterobacter ludwigii AA4 Against the Pine Wood Nematode Bursaphelenchus xylophilus

FRONTIERS IN MICROBIOLOGY, 5.

By: Y. Zhao*, Z. Yuan*, S. Wang, H. Wang*, Y. Chao*, R. Sederoff n, H. Sederoff n, H. Yan* ...

author keywords: sdaB; L-serine dehydratase; Enterobacter ludwigii; nematocidal activity; Bursaphelenchus xylophilus; pine wilt disease; methuosis
TL;DR: Enterobacter ludwigii AA4, isolated from the root of maize, has powerful nematocidal activity against B. xylophilus and has significant potential to serve as an agent for the biological control of pine wilt disease caused by B. (via Semantic Scholar)
Source: NC State University Libraries
Added: June 7, 2022

2022 journal article

High-throughput detection of T-DNA insertion sites for multiple transgenes in complex genomes

BMC GENOMICS, 23(1).

By: B. Edwards n, E. Hornstein n, N. Wilson n & H. Sederoff n

author keywords: Transgene; Insertion site; Polyploid; T-DNA; Sequencing
MeSH headings : DNA, Bacterial / genetics; Plant Breeding; Plants, Genetically Modified / genetics; Transgenes
TL;DR: A simple method to identify the sites of transgene insertions using T-DNA-specific primers and high-throughput sequencing that enables identification of multiple insertion sites in the T 1 generation of any crop transformed via Agrobacterium. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: October 17, 2022

2022 article

Organic solar powered greenhouse performance optimization and global economic opportunity

Ravishankar, E., Booth, R. E., Hollingsworth, J. A., Ade, H., Sederoff, H., DeCarolis, J. F., & Brendan T. O'Connor. (2022, March 10). ENERGY & ENVIRONMENTAL SCIENCE, Vol. 15.

UN Sustainable Development Goal Categories
Sources: ORCID, Web Of Science, NC State University Libraries
Added: March 19, 2022

2022 article

The double flower variant of yellowhorn is due to a LINE1 transposon-mediated insertion

Wang, H., Lu, Y., Zhang, T., Liu, Z., Cao, L., Chang, Q., … Zheng, Z. (2022, December 10). PLANT PHYSIOLOGY, Vol. 12.

By: H. Wang*, Y. Lu*, T. Zhang*, Z. Liu*, L. Cao*, Q. Chang*, Y. Liu*, X. Lu* ...

MeSH headings : Phenotype; Sapindaceae / genetics; Magnoliopsida / genetics; DNA Transposable Elements / genetics; Flowers / genetics; Gene Expression Regulation, Plant
TL;DR: This work found a candidate C-class gene, AGAMOUS1 (XsAG1), through BSA sequencing and genetics analysis with a LONG INTERSPERSED NUCLEAR ELEMENTS 1 (LINE1) transposable element fragment inserted into its second intron that caused a loss-of-C-function and therefore the double-flower phenotype in yellowhorn. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: February 20, 2023

2021 review

An Overview of the Practices and Management Methods for Enhancing Seed Production in Conifer Plantations for Commercial Use

[Review of ]. HORTICULTURAE, 7(8).

By: Y. Li*, X. Li*, M. Zhao*, Z. Pang, J. Wei*, M. Tigabu*, V. Chiang n, H. Sederoff n, R. Sederoff n, X. Zhao*

author keywords: conifers; flowering; seed production; pollination; phytohormones; tree management; nutrient fertilization
TL;DR: The review revealed that flowering and seed yields in conifers are affected by a variety of factors, such as pollen, temperature, light, water availability, nutrients, etc., and a number of management techniques, including topping off, pruning, fertilization, hormone treatment, supplementary pollination, etc. has been developed for improving cone yields. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: September 7, 2021

2021 journal article

Balancing crop production and energy harvesting in organic solar-powered greenhouses

CELL REPORTS PHYSICAL SCIENCE, 2(3).

By: E. Ravishankar n, M. Charles n, Y. Xiong n, R. Henry n, J. Swift n, J. Rech*, J. Calero n, S. Cho n ...

Sources: Web Of Science, NC State University Libraries, ORCID
Added: June 28, 2021

2021 article

Epigenetic modification associated with climate regulates betulin biosynthesis in birch

Wang, J., Chen, B., Ali, S., Zhang, T., Wang, Y., Zhang, H., … Zhang, Q. (2021, December 4). JOURNAL OF FORESTRY RESEARCH, Vol. 12.

By: J. Wang*, B. Chen*, S. Ali*, T. Zhang*, Y. Wang*, H. Zhang*, L. Wang*, Y. Zhang* ...

author keywords: Epigenetics; DNA methylation; Betulin; bHLH9 transcription factor; Hormesis; Climate change; Secondary metabolite
TL;DR: The role of environmental signals to induce epigenetic changes that result in betulin production is highlighted, possibly helping to develop resilient plants to combat ongoing climate change and enhance secondary metabolite production. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: December 13, 2021

2020 journal article

Achieving Net Zero Energy Greenhouses by Integrating Semitransparent Organic Solar Cells

JOULE, 4(2), 490–506.

By: E. Ravishankar n, R. Booth n, C. Saravitz n, H. Sederoff n, H. Ade n & . Brendan T. O'Connor n

Contributors: E. Ravishankar n, R. Booth n, C. Saravitz n, H. Sederoff n, H. Ade n & . B.T. O'Connor

UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: March 10, 2020

2020 review

Microbial Interactions Within Multiple-Strain Biological Control Agents Impact Soil-Borne Plant Disease

[Review of ]. FRONTIERS IN MICROBIOLOGY, 11.

By: B. Niu*, W. Wang*, Z. Yuan*, R. Sederoff n, H. Sederoff n, V. Chiang n, R. Borriss*

Contributors: B. Niu*, W. Wang*, Z. Yuan*, R. Sederoff n, H. Sederoff n, V. Chiang n, R. Borriss*

author keywords: microbial interaction; biological control agents; soil-borne disease; consortia; microbiome and community
TL;DR: The current state of the use of single strain and multi-strain biological control consortia in the management of soil-borne diseases and potential mechanisms used by microbial components to improve the disease suppressing efficacy are summarized. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: November 16, 2020

2020 journal article

Qu-2, a robust poplar suspension cell line for molecular biology

JOURNAL OF FORESTRY RESEARCH, 32(2), 733–740.

By: C. Liu*, K. Li*, M. Wang*, E. Fan*, C. Yang*, J. Wang*, P. Fu*, X. Ge* ...

Contributors: C. Liu*, K. Li*, M. Wang*, E. Fan*, C. Yang*, J. Wang*, P. Fu*, X. Ge* ...

author keywords: Qu-2 cell line; Suspension cell; Poplar; Protoplast isolation; Transient transformation
TL;DR: A hormone autotrophic poplar suspension cell line from a hybrid of Populus alba × P. berolinensis ‘Yinzhong’, named Qu-2, which has the great potential to be an excellent model cell line in tree molecular biological research, ranging from physiology to gene function. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: January 4, 2021

2019 journal article

One thousand plant transcriptomes and the phylogenomics of green plants

NATURE, 574(7780), 679-+.

By: H. Sederoff & K. Burris (2 connected NC State authors and many others, 194 authors in total )

Contributors: J. Leebens-Mack, M. Barker, E. Carpenter, M. Deyholos, M. Gitzendanner, S. Graham, I. Grosse, Z. Li ...

TL;DR: It is found that large expansions of gene families preceded the origins of green plants, land plants and vascular plants, whereas whole-genome duplications are inferred to have occurred repeatedly throughout the evolution of flowering plants and ferns. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science; OpenAlex)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: November 18, 2019

2019 journal article

Relating nitrogen concentration and light intensity to the growth and lipid accumulation of Dunaliella viridis in a photobioreactor

Journal of Applied Phycology, 31(6), 3397–3409.

By: Y. Lai n, A. Karam n, H. Sederoff n, J. Ducoste n & F. de los Reyes n

Contributors: Y. Lai n, A. Karam n, H. Sederoff n, J. Ducoste n & F. Reyes n

author keywords: Dunaliella viridis; Chlorophyta; Lipid; Light; Nitrogen; Photobioreactor
TL;DR: The data show that D. viridis accumulates cellular carbohydrates as a primary carbon and energy storage product and then converts the cellular carbohydrates into cellular lipids as a secondary storage product when nitrogen is depleted, suggesting the possible use of real-time light data as a method for in situ quantification of biomass concentration and chlorophyll a concentration. (via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Sources: ORCID, Crossref, NC State University Libraries
Added: August 28, 2019

2018 journal article

Grafting the Indeterminate Tomato Cultivar Moneymaker onto Multifort Rootstock Improves Cold Tolerance

HORTSCIENCE, 53(11), 1610–1617.

By: D. Suchoff n, P. Perkins-Veazie n, H. Sederoff n, J. Schultheis n, M. Kleinhenz n, F. Louws n, C. Gunter n

Contributors: D. Suchoff n, P. Perkins-Veazie n, H. Sederoff n, J. Schultheis n, M. Kleinhenz n, F. Louws n, C. Gunter n

author keywords: Solanum habrochaites; Solanum lycopersicum; herbaceous grafts; root system morphology; suboptimal temperature
TL;DR: The ability for ‘Multifort’ to maintain root growth at suboptimal temperatures may improve root system sink strength, thereby promoting movement of photosynthate from leaf to root even under cold conditions. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
7. Affordable and Clean Energy (OpenAlex)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: December 17, 2018

2018 journal article

Metabolic and Transcriptional Profiles of Dunaliella viridis Supplemented With Ammonium Derived From Glutamine

FRONTIERS IN MARINE SCIENCE, 5(AUG).

By: J. Dums n, C. Murphree n, N. Vasani n, D. Young n & H. Sederoff n

Contributors: J. Dums n, C. Murphree n, N. Vasani n, D. Young n & H. Sederoff n

author keywords: Dunaliella; nitrogen starvation; ammonium; amino acids; glutamine; biofuel; nitrogen recycling; transcriptome
TL;DR: The results indicate that a continuous, amino acid derived slow release of NH4+ to algae cultures could reduce the amount of synthetic nitrogen needed for growth, but optimization is needed to balance nitrogen starvation and cell division. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: February 18, 2019

2017 journal article

Accumulation of medium-chain, saturated fatty acyl moieties in seed oils of transgenic Camelina sativa

PLOS ONE, 12(2).

By: Z. Hu n, Q. Wu n, J. Dalal n, N. Vasani n, H. Lopez n, H. Sederoff n, R. Qu n

Contributors: Z. Hu n, Q. Wu n, J. Dalal n, N. Vasani n, H. Lopez n, H. Sederoff n, R. Qu n

MeSH headings : 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase / deficiency; 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase / genetics; Brassicaceae / genetics; Brassicaceae / metabolism; Plant Oils / metabolism; Plants, Genetically Modified; RNA Interference; Seeds / metabolism; Thiolester Hydrolases / genetics; Triglycerides / chemistry; Triglycerides / metabolism; Umbellularia / enzymology; Umbellularia / genetics
TL;DR: The results show that a California bay gene can be successfully used to modify the oil composition in camelina seed and present a new biological alternative for jet fuel production. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018

2017 journal article

Amino Acids Are an Ineffective Fertilizer for Dunaliella spp. Growth

FRONTIERS IN PLANT SCIENCE, 8.

By: C. Murphree n, J. Dums n, S. Jain n, C. Zhao*, D. Young n, N. Khoshnoodi*, A. Tikunov*, J. Macdonald* ...

Contributors: C. Murphree n, J. Dums n, S. Jain n, C. Zhao*, D. Young n, N. Khoshnoodi*, A. Tikunov*, J. Macdonald*, G. Pilot*, H. Sederoff n

author keywords: Dunaliella; nitrogen recycling; lipids; biofuel; amino acids; sustainability
TL;DR: It is found that only four amino acids (glutamine, histidine, cysteine, and tryptophan) rescue Dunaliella spp. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018

2017 journal article

Construction and Setup of a Bench-scale Algal Photosynthetic Bioreactor with Temperature, Light, and pH Monitoring for Kinetic Growth Tests

Journal of Visualized Experiments, 2017(124).

By: A. Karam n, C. McMillan n, Y. Lai n, F. de los Reyes n, H. Sederoff n, A. Grunden n, R. Ranjithan n, J. Levis n, J. Ducoste n

Contributors: A. Karam n, C. McMillan n, Y. Lai n, F. De Los Reyes n, H. Sederoff n, A. Grunden n, R. Ranjithan n, J. Levis n, J. Ducoste n

author keywords: Bioengineering; Issue 124; Photosynthetic bioreactors; microalgae; growth kinetics; biofuel; temperature; light; pH; automated monitoring
MeSH headings : Biofuels; Bioreactors / microbiology; Hydrogen-Ion Concentration; Kinetics; Light; Microalgae / growth & development; Models, Biological; Photosynthesis; Temperature
TL;DR: This protocol describes how to size and assemble a flat-plate, bench-scale PBR from acrylic and details how to configure a PBR with continuous pH, light, and temperature monitoring using a data acquisition and control unit, analog sensors, and open-source data acquisition software. (via Semantic Scholar)
Sources: ORCID, NC State University Libraries, Crossref
Added: January 18, 2019

2017 journal article

Construction and setup of a bench-scale algal photosynthetic bioreactor with temperature, light, and ph monitoring for kinetic growth tests

Jove-Journal of Visualized Experiments, (124).

By: A. Karam n, C. McMillan n, Y. Lai n, F. Reyes n, H. Sederoff n, A. Grunden n, R. Ranjithan n, J. Levis, J. Ducoste n

Sources: Crossref, NC State University Libraries
Added: August 6, 2018

2016 journal article

ROSY1, a novel regulator of gravitropic response is a stigmasterol binding protein

JOURNAL OF PLANT PHYSIOLOGY, 196-197, 28–40.

By: J. Dalal n, D. Lewis*, O. Tietz*, E. Brown n, C. Brown n, K. Palme*, G. Muday*, H. Sederoff n

Contributors: J. Dalal n, D. Lewis*, O. Tietz*, E. Brown n, C. Brown n, K. Palme*, G. Muday*, H. Sederoff n

author keywords: Gravity; Root; Auxin; Sterol; Lipid; Membrane composition; Arabidopsis
MeSH headings : Amino Acid Sequence; Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Biological Transport; Carrier Proteins / genetics; Carrier Proteins / metabolism; Gravitropism; Indoleacetic Acids / metabolism; Organ Specificity; Phylogeny; Sequence Alignment; Stigmasterol / metabolism
TL;DR: The results suggest that ROSY1 plays a role in root gravitropism, possibly by facilitating membrane trafficking and asymmetric cell elongation via its interaction with synaptotagmin-1. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018

2015 journal article

A novel gateway-compatible binary vector series (PC-GW) for flexible cloning of multiple genes for genetic transformation of plants

PLASMID, 81, 55–62.

By: J. Dalal n, R. Yalamanchili n, C. Hovary n, M. Ji n, M. Rodriguez-Welsh n, D. Aslett n, S. Ganapathy n, A. Grunden n ...

Contributors: J. Dalal n, R. Yalamanchili n, C. La Hovary n, M. Ji n, M. Rodriguez-Welsh n, D. Aslett n, S. Ganapathy n, A. Grunden n, H. Sederoff n, R. Qu n

author keywords: Gateway; Plant transformation; Agrobacterium; Gene stacking
MeSH headings : Cloning, Molecular / methods; Gene Expression; Gene Order; Genes, Reporter; Genetic Vectors / genetics; Plants, Genetically Modified; Plasmids / genetics; Transformation, Genetic; Transgenes
TL;DR: The PC-GW vectors provide choices for selectable markers, cloning methods, and can accommodate up to eight gene constructs in a single T-DNA, thereby significantly reducing the number of transformations or crosses needed to generate multi-transgene expressing plants. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018

2015 journal article

A photorespiratory bypass increases plant growth and seed yield in biofuel crop Camelina sativa

BIOTECHNOLOGY FOR BIOFUELS, 8(1).

By: J. Dalal n, H. Lopez n, N. Vasani n, Z. Hu n, J. Swift n, R. Yalamanchili n, M. Dvora n, X. Lin n ...

Contributors: J. Dalal n, H. Lopez n, N. Vasani n, Z. Hu n, J. Swift n, R. Yalamanchili n, M. Dvora n, X. Lin n ...

author keywords: Camelina; Seed yield; Biofuel; Photorespiratory bypass; Photosynthesis
TL;DR: By reducing photorespiratory losses and increasing photosynthetic CO2 fixation rates, transgenic plants show dramatic increases in seed yield, and the bypass approach may have significant impact on increasing agricultural productivity for C3 crops. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018

2015 journal article

Algal ancestor of land plants was preadapted for symbiosis

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 112(43), 13390–13395.

By: P. Delaux*, G. Radhakrishnan*, D. Jayaraman*, J. Cheem*, M. Malbreil*, J. Volkening*, H. Sekimoto*, T. Nishiyama* ...

Contributors: P. Delaux*, G. Radhakrishnan*, D. Jayaraman*, J. Cheema*, M. Malbreil*, J. Volkening*, H. Sekimoto*, T. Nishiyama* ...

author keywords: symbiosis; plant evolution; algae; plant-microbe interactions; phylogeny
MeSH headings : Adaptation, Biological / genetics; Adaptation, Biological / physiology; Base Sequence; Biological Evolution; Chlorophyta / genetics; Chlorophyta / physiology; Closterium / genetics; Closterium / growth & development; DNA Primers / genetics; Embryophyta / genetics; Embryophyta / physiology; Fungi / physiology; Hepatophyta / genetics; Hepatophyta / growth & development; Likelihood Functions; Medicago truncatula / microbiology; Models, Genetic; Molecular Sequence Data; Mycorrhizae / physiology; Phylogeny; Plant Proteins / genetics; Plant Roots / microbiology; RNA, Plant / genetics; Reverse Transcriptase Polymerase Chain Reaction; Sequence Analysis, RNA; Spirogyra / genetics; Spirogyra / growth & development; Symbiosis / genetics; Symbiosis / physiology
TL;DR: It is proposed that the most recent common ancestor of extant land plants and green algae was preadapted for symbiotic associations and employed these gene networks to colonize land successfully. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
15. Life on Land (Web of Science; OpenAlex)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018

2015 journal article

Interaction of Temperature and Photoperiod Increases Growth and Oil Content in the Marine Microalgae Dunaliella viridis

PLOS ONE, 10(5).

By: S. Srirangan n, M. Sauer n, B. Howard n, M. Dvora n, J. Dums n, P. Backman n, H. Sederoff n

Contributors: S. Srirangan n, M. Sauer n, B. Howard n, M. Dvora n, J. Dums n, P. Backman n, H. Sederoff n

MeSH headings : Marine Biology; Microalgae / growth & development; Microalgae / metabolism; Molecular Sequence Data; Oils / metabolism; Photoperiod; Temperature
UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018

2015 chapter

Methods for RNA Profiling of Gravi-Responding Plant Tissues

In Methods in Molecular Biology (Vol. 1309, pp. 91–117).

By: J. Dalal n, E. Land n, N. Vasani n, L. He n, C. Smith n, M. Rodriguez-Welsh n, I. Perera n, H. Sederoff n

Contributors: J. Dalal n, E. Land n, N. Vasani n, L. He n, C. Smith n, M. Rodriguez-Welsh n, I. Perera n, H. Sederoff n

author keywords: RNA; Transcript; Transcriptome; Sequencing; PCR; RNAseq; sRNA; miRNA
MeSH headings : Gene Expression Profiling / methods; Gene Expression Regulation, Plant; Gravity Sensing / genetics; Oligonucleotide Array Sequence Analysis / methods; RNA / genetics; RNA, Messenger / biosynthesis; RNA, Messenger / genetics; Seeds / genetics; Seeds / growth & development; Transcriptome / genetics
TL;DR: The current and most widely used methods to profile the changes in an entire transcriptome by high-throughput sequencing of RNA fractions (RNAseq) and single gene transcript analysis using real-time quantitative reverse-transcriptase polymerase chain reaction (qRT-PCR) are described. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries, ORCID, Crossref
Added: August 6, 2018

2013 journal article

ASI: Dunaliella marine microalgae to drop-in replacement liquid transportation fuel

Environmental Progress & Sustainable Energy, 32(4), 916–925.

By: W. Wang n, E. Allen n, A. Campos n, R. Cade n, L. Dean*, M. Dvora n, J. Immer n, S. Mixson n ...

Contributors: W. Wang n, E. Allen n, A. Campos n, R. Cade n, L. Dean*, M. Dvora n, J. Immer n, S. Mixson n ...

TL;DR: A technically feasible and scalable thermo-catalytic process to convert the lipids into replacements for liquid transportation fuels has been developed and these alkanes can be reformed into renewable diesel via conventional catalytic hydrocarbon isomerization reactions to improve cold flow properties, if desired. (via Semantic Scholar)
Sources: Crossref, NC State University Libraries, ORCID
Added: March 1, 2020

2013 journal article

High-Throughput RNA Sequencing of Pseudomonas-Infected Arabidopsis Reveals Hidden Transcriptome Complexity and Novel Splice Variants

PLOS ONE, 8(10).

By: B. Howard n, Q. Hu n, A. Babaoglu n, M. Chandra n, M. Borghi n, X. Tan n, L. He n, H. Winter-Sederoff ...

Contributors: B. Howard n, Q. Hu n, A. Babaoglu n, M. Chandra n, M. Borghi n, X. Tan n, L. He n, H. Winter-Sederoff ...

MeSH headings : Alternative Splicing / genetics; Arabidopsis / microbiology; Exons / genetics; Gene Expression Profiling; Genomics; High-Throughput Nucleotide Sequencing; Introns / genetics; Pseudomonas syringae / genetics; Pseudomonas syringae / physiology; RNA Splice Sites / genetics; Sequence Analysis, RNA; Transcription, Genetic / genetics
TL;DR: A genome-wide analysis of transcription in Arabidopsis thaliana after treatment with Pseudomonas syringae pathovar tomato finds several genes previously known to be alternatively spliced or expressed during the defense response may serve as a pool of candidate genes for regulated alternative splicing with possible biological relevance for thedefense response against invasive pathogens. (via Semantic Scholar)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: August 6, 2018

2012 journal article

A physical map of the Chinese chestnut (Castanea mollissima) genome and its integration with the genetic map

TREE GENETICS & GENOMES, 9(2), 525–537.

By: G. Fang*, B. Blackmon*, M. Staton*, C. Nelson*, T. Kubisiak*, B. Olukolu n, D. Henry*, T. Zhebentyayeva* ...

author keywords: Castanea spp.; Chestnut; BAC library; HICF fingerprinting; Physical map; Comparative genomics; Chestnut blight resistance
TL;DR: Integration of the dense Chinese chestnut genetic map with the physical map was achieved via high-throughput hybridization using overgo probes derived from sequence-based genetic markers. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2012 journal article

The SOS4 pyridoxal kinase is required for maintenance of vitamin B-6-mediated processes in chloroplasts

PLANT PHYSIOLOGY AND BIOCHEMISTRY, 63, 281–291.

By: E. Rueschhoff n, J. Gillikin n, H. Sederoff n & M. Daub n

Contributors: E. Rueschhoff n, J. Gillikin n, H. Sederoff n & M. Daub n

author keywords: Pyridoxine; Pyridoxamine; Pyridoxal kinase; Pyridoxal phosphate synthase
MeSH headings : Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Chloroplasts / metabolism; Models, Biological; Pyridoxal Kinase / genetics; Pyridoxal Kinase / metabolism; Vitamin B 6 / metabolism
TL;DR: Comparing two mutants for vitamin B(6)-metabolizing enzymes in Arabidopsis thaliana shows that both mutants share similar phenotypes, including chlorosis, decreased size, altered chloroplast ultrastructure, and root sensitivity to sucrose, and data indicate that some of the phenotypic consequences shared between the pdx1.3 and sos4 mutants are due to B( 6) deficiency in chloroplasts. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018

2011 journal article

An ER-targeted calcium-binding peptide confers salt and drought tolerance mediated by CIPK6 in Arabidopsis

PLANTA, 235(3), 539–552.

By: P. Tsou*, S. Lee n, N. Allen n, H. Winter-Sederoff & D. Robertson n

Contributors: P. Tsou*, S. Lee n, N. Allen n, H. Winter-Sederoff & D. Robertson n

author keywords: ER calcium; Calcium-binding peptide (CBP); CBL-interacting protein kinase (CIPK6); Drought; Salt
MeSH headings : Arabidopsis / drug effects; Arabidopsis / genetics; Arabidopsis / metabolism; Calcium / metabolism; Chlorophyll / metabolism; Droughts; Endoplasmic Reticulum / metabolism; Gene Expression Regulation, Plant; Immunoblotting; Peptides / genetics; Peptides / metabolism; Plant Proteins / genetics; Plant Proteins / metabolism; Plant Roots / drug effects; Plant Roots / genetics; Plant Roots / metabolism; Plants, Genetically Modified / drug effects; Plants, Genetically Modified / genetics; Plants, Genetically Modified / metabolism; Potassium / metabolism; Reverse Transcriptase Polymerase Chain Reaction; Salts / pharmacology; Sodium / metabolism
TL;DR: This work demonstrates that ER (or nuclear) Ca2+ can directly participate in signal transduction to alter gene expression and the discovery of a method for increasing Ca 2+ levels without deleterious effects on plant growth may have practical applications. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: ORCID, Web Of Science
Added: August 6, 2018

2011 journal article

Arabidopsis thaliana calcium-dependent lipid-binding protein (AtCLB): a novel repressor of abiotic stress response

JOURNAL OF EXPERIMENTAL BOTANY, 62(8), 2679–2689.

By: K. Silva*, B. Laska, C. Brown*, H. Sederoff* & M. Khodakovskaya*

Contributors: K. De Silva*, B. Laska, C. Brown*, H. Sederoff* & M. Khodakovskaya*

author keywords: Ca2+-sensing proteins; ceramide; increased tolerance to salt and drought stress; repressor of abiotic stress response; thalianol synthase gene
MeSH headings : Amino Acid Sequence; Arabidopsis / drug effects; Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / chemistry; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Ceramides / metabolism; DNA, Bacterial / genetics; DNA, Plant / metabolism; Droughts; Electrophoretic Mobility Shift Assay; Gene Expression Profiling; Gene Expression Regulation, Plant / drug effects; Genes, Plant / genetics; Gravitropism / drug effects; Gravitropism / genetics; Molecular Sequence Data; Mutation / genetics; Organ Specificity / drug effects; Organ Specificity / genetics; Plant Roots / drug effects; Plant Roots / metabolism; Promoter Regions, Genetic / genetics; Protein Binding / drug effects; Protein Transport / drug effects; Repressor Proteins / chemistry; Repressor Proteins / genetics; Repressor Proteins / metabolism; Reverse Transcriptase Polymerase Chain Reaction; Salt Tolerance / drug effects; Salt Tolerance / genetics; Sodium Chloride / pharmacology; Stress, Physiological / drug effects; Stress, Physiological / genetics
TL;DR: The role of the Atclb gene in negatively regulating responses to abiotic stress in Arabidopsis thaliana was identified and the loss of the ATCLb gene function confers an enhanced drought and salt tolerance and a modified gravitropic response in T-DNA insertion knockout mutant lines. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018

2010 journal article

Basal Signaling Regulates Plant Growth and Development

PLANT PHYSIOLOGY, 154(2), 439–443.

By: W. Boss n, H. Sederoff n, Y. Im n, N. Moran n, A. Grunden n & I. Perera n

Contributors: W. Boss n, H. Sederoff n, Y. Im n, N. Moran n, A. Grunden n & I. Perera n

MeSH headings : Plant Development; Plant Physiological Phenomena; Second Messenger Systems
TL;DR: The term signal transduction refers to the classical paradigm where an external stimulus is sensed and initiates an increase in second messengers and each second messenger transmits and amplifies the signal by activating a subset of downstream pathways. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science; OpenAlex)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018

2010 conference paper

EFRI-HyBi: Algal oils to "drop-in" replacements for petroleum transportation fuels

ACS National Meeting Book of Abstracts. http://www.scopus.com/inward/record.url?eid=2-s2.0-79951504751&partnerID=MN8TOARS

By: H. Henry Lamb, J. Burkholder, W. Roberts, H. Sederoff & L. Strikeleather

Contributors: H. Henry Lamb, J. Burkholder, W. Roberts, H. Sederoff & L. Strikeleather

Source: ORCID
Added: February 11, 2021

2010 journal article

Lignin and Biomass: A Negative Correlation for Wood Formation and Lignin Content in Trees

PLANT PHYSIOLOGY, 154(2), 555–561.

MeSH headings : Biomass; Gene Expression Regulation, Plant; Lignin / biosynthesis; Lignin / chemistry; Transcription Factors / metabolism; Trees / genetics; Trees / growth & development; Trees / metabolism; Wood / genetics; Wood / growth & development; Wood / metabolism
TL;DR: Studies in populations of forest tree hybrids have shown a negative correlation of biomass growth and lignin content, implying that selection for biomass growth may be highly regulated. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Sources: ORCID, Web Of Science
Added: August 6, 2018

2010 journal article

Role of inositol 1,4,5-triphosphate signalling in gravitropic and phototropic gene expression

Plant, Cell & Environment, 33(12), 2041–2055.

By: R. Salinas Mondragon, J. Kajla n, I. Perera n, C. Brown n & H. Sederoff n

Contributors: R. Salinas-Mondragon, J. Kajla n, I. Perera n, C. Brown n & H. Sederoff n

author keywords: gravitropism; inositol phosphate; phospholipase C; photomorphogenesis; phototropism; transcription
MeSH headings : Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis / metabolism; Gene Expression Regulation, Plant; Gravitropism; Hypocotyl / growth & development; Inositol 1,4,5-Trisphosphate / metabolism; Phototropism; Plant Roots / metabolism; Plants, Genetically Modified / growth & development; Plants, Genetically Modified / metabolism; Signal Transduction; Type C Phospholipases / metabolism
TL;DR: It is concluded that changes in gene expression in response to gravitropic and phototropic stimulation are mediated by two signal transduction pathways that vary in their dependence on changes in InsP(3). (via Semantic Scholar)
Sources: ORCID, Crossref, NC State University Libraries
Added: January 19, 2020

2009 journal article

Increasing inositol (1,4,5)-trisphosphate metabolism affects drought tolerance, carbohydrate metabolism and phosphate-sensitive biomass increases in tomato

Plant Biotechnology Journal, 8(2), 170–183.

By: M. Khodakovskaya*, C. Sword*, Q. Wu n, I. Perera n, W. Boss n, C. Brown n, H. Sederoff*

Contributors: M. Khodakovskaya*, C. Sword*, Q. Wu n, I. Perera n, W. Boss n, C. Brown n, H. Winter Sederoff

MeSH headings : Biomass; Carbohydrate Metabolism; Carotenoids / metabolism; Cytosol / metabolism; DNA, Plant / genetics; Droughts; Fruit / growth & development; Fruit / metabolism; Gene Expression Profiling; Gene Expression Regulation, Plant; Hexoses / metabolism; Humans; Hydrolysis; Inositol 1,4,5-Trisphosphate / metabolism; Inositol Polyphosphate 5-Phosphatases; Lycopene; Solanum lycopersicum / genetics; Solanum lycopersicum / growth & development; Solanum lycopersicum / metabolism; Oligonucleotide Array Sequence Analysis; Phosphoric Monoester Hydrolases / genetics; Plant Leaves / metabolism; Plants, Genetically Modified / genetics; Plants, Genetically Modified / growth & development; Plants, Genetically Modified / metabolism
Sources: NC State University Libraries, NC State University Libraries, ORCID
Added: August 6, 2018

2007 chapter

Plan(t)s for Space Exploration

In Plant Tropisms (pp. 183–195).

By: C. Brown, H. Sederoff*, E. Davies, R. Ferl & B. Stankovic

Contributors: C. Brown, H. Sederoff*, E. Davies, R. Ferl & B. Stankovic

Source: ORCID
Added: February 11, 2021

2007 conference paper

Quality Assessment of Affymetrix GeneChip Data using the EM Algorithm and a Naive Bayes Classifier

2007 IEEE 7th International Symposium on BioInformatics and BioEngineering, 145–150.

By: B. Howard n, B. Sick n, I. Perera n, Y. Im n, H. Winter-Sederoff & S. Heber n

Contributors: B. Howard n, B. Sick n, I. Perera n, J. Yang n, H. Winter-Sederoff & S. Heber n

Event: 2007 IEEE 7th International Symposium on BioInformatics and BioEngineering

TL;DR: This paper demonstrates the utility of an unsupervised classification technique based on the Expectation-Maximization (EM) algorithm and naive Bayes classification that exhibits performance comparable to that of an analogous supervised learner constructed from the same training data. (via Semantic Scholar)
Sources: ORCID, Crossref, NC State University Libraries
Added: September 6, 2020

2005 journal article

Co-expression and hormonal regulation of genes in response to gravity and mechanical stimulation in the Arabidopsis root apex.

Gravitational and Space Biology Bulletin : Publication of the American Society for Gravitational and Space Biology, 18(2), 117–118. http://www.scopus.com/inward/record.url?eid=2-s2.0-26944462406&partnerID=MN8TOARS

By: J. Kimbrough, C. Brown & H. Sederoff

Contributors: J. Kimbrough, C. Brown & H. Sederoff

Source: ORCID
Added: February 11, 2021

2005 journal article

Gravity and light: integrating transcriptional regulation in roots.

Gravitational and Space Biology Bulletin : Publication of the American Society for Gravitational and Space Biology, 18(2), 121–122. http://www.scopus.com/inward/record.url?eid=2-s2.0-24944540197&partnerID=MN8TOARS

By: R. Salinas-Mondragon, A. Brogan, N. Ward, I. Perera, W. Boss, C. Brown, H. Sederoff

Contributors: R. Salinas-Mondragon, A. Brogan, N. Ward, I. Perera, W. Boss, C. Brown, H. Sederoff

Source: ORCID
Added: February 11, 2021

2004 journal article

Phosphorylation of the amino terminus of maize sucrose synthase in relation to membrane association and enzyme activity

PLANT PHYSIOLOGY, 134(4), 1427–1438.

By: S. Hardin n, H. Winter n & S. Huber n

Contributors: S. Hardin n, H. Winter n & S. Huber n

MeSH headings : Enzyme Activation; Glucosyltransferases / chemistry; Glucosyltransferases / metabolism; Hydrogen-Ion Concentration; Intracellular Membranes / enzymology; Intracellular Space / enzymology; Phosphorylation; Plant Leaves / enzymology; Plant Leaves / growth & development; Protein Conformation; Sucrose / metabolism; Zea mays / enzymology; Zea mays / growth & development
TL;DR: The results suggest that SUS membrane binding is controlled in vivo; relative pS15 content of m-SUS depends on the developmental state of the organ; and phosphorylation of S15 affects amino-terminal conformation in a way that may stimulate the catalytic activity of SUS and influence membrane association. (via Semantic Scholar)
Sources: ORCID, Web Of Science
Added: August 6, 2018

2004 journal article

The fast and transient transcriptional network of gravity and mechanical stimulation in the Arabidopsis root Apex

PLANT PHYSIOLOGY, 136(1), 2790–2805.

By: J. Kimbrough n, R. Salinas-Mondragon, W. Boss n, C. Brown n & H. Sederoff n

Contributors: J. Kimbrough n, R. Salinas-Mondragon, W. Boss n, C. Brown n & H. Sederoff n

MeSH headings : Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Cell Wall / metabolism; Gene Expression Profiling; Gene Expression Regulation, Plant; Genome, Plant; Gravitation; Physical Stimulation; Plant Roots / growth & development; Transcription Factors / genetics; Transcription, Genetic
TL;DR: The whole-genome microarray analysis of Arabidopsis root apices after gravity stimulation (reorientation) and mechanical stimulation and transcript levels monitored revealed rapid, transient changes in the relative abundance of specific transcripts occurred in response to gravity or mechanical stimulation, and these transcript level changes reveal clusters of coordinated events. (via Semantic Scholar)
Sources: ORCID, Web Of Science
Added: August 6, 2018

2003 journal article

Phosphorylation of sucrose synthase at serine 170: occurrence and possible role as a signal for proteolysis

PLANT JOURNAL, 35(5), 588–603.

By: S. Hardin n, G. Tang n, A. Scholz*, D. Holtgraewe, H. Winter & S. Huber n

Contributors: S. Hardin n, G. Tang n, A. Scholz*, D. Holtgraewe, H. Winter & S. Huber n

author keywords: CDPK; maize; phosphorylation; proteasome; SnRK1; sucrose synthase
MeSH headings : Cysteine Endopeptidases / metabolism; Glucosyltransferases / metabolism; Multienzyme Complexes / metabolism; Phosphorylation; Proteasome Endopeptidase Complex; Protein Serine-Threonine Kinases / metabolism; Serine / metabolism; Signal Transduction / physiology; Zea mays / enzymology
TL;DR: A model wherein S170 phosphorylation functions as part of a mechanism targeting SUS for proteasome-mediated degradation is supported by the observations that SUS proteolytic fragments were detected and possessed relatively high phosphorylated-S170 (pS170) stoichiometry, which may explain the specific and significant decrease in SUS abundance that accompanies the sink-to-source transition in developing maize leaves. (via Semantic Scholar)
Sources: ORCID, Web Of Science
Added: August 6, 2018

2002 journal article

Effect of short-term N<inf>2</inf> deficiency on expression of the ureide pathway in cowpea root nodules

Plant Physiology, 129(3), 1216–1221.

By: P. Smith*, H. Winter*, P. Storer*, J. Bussell*, K. Schuller* & C. Atkins*

Contributors: P. Smith*, H. Winter*, P. Storer*, J. Bussell*, K. Schuller* & C. Atkins*

MeSH headings : Argon / pharmacology; Bradyrhizobium / growth & development; Carbon-Nitrogen Ligases / genetics; Carbon-Nitrogen Ligases / metabolism; Enzymes / genetics; Enzymes / metabolism; Fabaceae / enzymology; Fabaceae / genetics; Fabaceae / microbiology; Gene Expression Regulation, Enzymologic / drug effects; Gene Expression Regulation, Plant / drug effects; Hydroxymethyl and Formyl Transferases / genetics; Hydroxymethyl and Formyl Transferases / metabolism; Nitrogen / metabolism; Nitrogen Fixation; Oxygen / pharmacology; Phosphoenolpyruvate Carboxylase / genetics; Phosphoenolpyruvate Carboxylase / metabolism; Phosphoribosylglycinamide Formyltransferase; Plant Proteins / genetics; Plant Proteins / metabolism; Plant Roots / enzymology; Plant Roots / genetics; Plant Roots / microbiology; Symbiosis / genetics; Time Factors; Urate Oxidase / genetics; Urate Oxidase / metabolism
TL;DR: The data indicate that the flux of fixed N from bacteroids (N2-fixing nodule bacteria) is in some way associated with transcriptional control over pur5and possibly also catabolism of AIRS protein. (via Semantic Scholar)
Source: ORCID
Added: February 11, 2021

2000 journal article

Regulation of sucrose metabolism in higher plants: Localization and regulation of activity of key enzymes

Critical Reviews in Plant Sciences, 19(1), 31–67.

By: H. Winter & S. Huber n

Contributors: H. Winter & S. Huber n

TL;DR: The purpose of this review is to summarize some of the recent developments relating to regulation of activity and localization of key enzymes involved in sucrose metabolism in plants. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: ORCID
Added: February 11, 2021

2000 review

Regulation of sucrose metabolism in higher plants: Localization and regulation of activity of key enzymes

[Review of ]. CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY, 35(4), 253–289.

By: H. Winter* & S. Huber n

Contributors: H. Winter* & S. Huber n

author keywords: actin cytoskeleton; 14-3-3 proteins; invertase; SNF1 protein kinase; CDPK; regulatory protein phosphorylation; sucrose-phosphate synthase; sucrose-sensing; sucrose synthase; translocation
MeSH headings : Actins / metabolism; Amino Acid Sequence; Cell Membrane / metabolism; Gene Expression Regulation, Plant; Glucosyltransferases / chemistry; Glucosyltransferases / genetics; Glucosyltransferases / metabolism; Glycoside Hydrolases / chemistry; Glycoside Hydrolases / metabolism; Molecular Sequence Data; Phosphorylation; Plant Leaves / enzymology; Plant Leaves / metabolism; Plant Proteins / metabolism; Plants / enzymology; Plants / metabolism; Sequence Alignment; Sucrose / metabolism; beta-Fructofuranosidase
TL;DR: The purpose of this review is to summarize some of the recent developments relating to regulation of activity and localization of key enzymes involved in sucrose metabolism in plants. (via Semantic Scholar)
Sources: ORCID, Web Of Science
Added: August 6, 2018

1999 journal article

The site of oxygen limitation in soybean nodules

PLANT PHYSIOLOGY, 119(2), 399–407.

By: M. Kuzma*, H. Winter, P. Storer*, I. Oresnik*, C. Atkins* & D. Layzell*

Contributors: M. Kuzma*, H. Winter, P. Storer*, I. Oresnik*, C. Atkins* & D. Layzell*

TL;DR: It is proposed that steep adenylate gradients may exist between the site of ATP synthesis (and ADP use) in the mitochondria and the extra-mitochondrial sites of ATP use ( and ADP production) throughout the large, infected cells. (via Semantic Scholar)
Sources: ORCID, Web Of Science
Added: August 6, 2018

1998 journal article

Growth dynamics and cytoskeleton organization during stem maturation and gravity-induced stem bending in Zea mays L.

PLANTA, 207(2), 246–258.

By: D. Collings n, H. Winter, S. Wyatt n & N. Allen n

Contributors: D. Collings n, H. Winter, S. Wyatt n & N. Allen n

author keywords: actin; cell elongation; gravitropism; microtubule; pulvinus; Zea (gravitropism)
MeSH headings : Cell Wall; Cytoskeleton / physiology; Cytoskeleton / ultrastructure; Gravitation; Gravitropism / physiology; Gravity Sensing; Microscopy, Electron; Microtubules / physiology; Microtubules / ultrastructure; Plant Stems / growth & development; Plant Stems / ultrastructure; Pulvinus / growth & development; Pulvinus / ultrastructure; Time Factors; Zea mays / growth & development; Zea mays / ultrastructure
TL;DR: Characterization of gravitropic bending in the maize stem pulvinus, a tissue that functions specifically in gravity responses, demonstrates that the Pulvinus is an ideal system for studying gravitroism. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: ORCID, Web Of Science
Added: August 6, 2018

1998 journal article

Identification of sucrose synthase as an actin-binding protein

FEBS LETTERS, 430(3), 205–208.

By: H. Winter, J. Huber n & S. Huber n

Contributors: H. Winter, J. L. Huber n & S. Huber n

author keywords: actin-binding protein; actin cytoskeleton; aldolase; sucrose synthase; phalloidin
MeSH headings : Actins / metabolism; Animals; Binding Sites; Detergents; Fructose-Bisphosphate Aldolase / metabolism; Glucosyltransferases / chemistry; Glucosyltransferases / isolation & purification; Glucosyltransferases / metabolism; Microfilament Proteins / chemistry; Microfilament Proteins / isolation & purification; Microfilament Proteins / metabolism; Molecular Weight; Octoxynol; Phosphorylation; Rabbits; Serum Albumin, Bovine; Solubility; Zea mays / enzymology
TL;DR: It is postulate that some of the soluble SuSy in the cytosol may be associated with the actin cytoskeleton in vivo, suggesting that a common or overlapping binding site may be involved. (via Semantic Scholar)
Sources: ORCID, Web Of Science
Added: August 6, 2018

1997 journal article

Membrane association of sucrose synthase: changes during the graviresponse and possible control by protein phosphorylation

FEBS LETTERS, 420(2-3), 151–155.

By: H. Winter, J. Huber n & S. Huber n

Contributors: H. Winter, J. Huber n & S. Huber n

author keywords: protein phosphorylation; sucrose synthase; surface hydrophobicity; membrane association; gravity response; Zea mays L. pulvinus
MeSH headings : Adenosine Triphosphate / metabolism; Anilino Naphthalenesulfonates / metabolism; Blotting, Western; Cyclic AMP-Dependent Protein Kinases / antagonists & inhibitors; Cyclic AMP-Dependent Protein Kinases / metabolism; Electrophoresis, Polyacrylamide Gel; Enzyme Inhibitors / pharmacology; Fluorescent Dyes / metabolism; Glucosyltransferases / analysis; Glucosyltransferases / metabolism; Gravitation; Membrane Proteins / metabolism; Phosphorylation; Plant Proteins / metabolism; Precipitin Tests; Solubility; Uridine Diphosphate Glucose / metabolism; Zea mays / enzymology
TL;DR: It is postulate that phosphorylation of SuSy (and perhaps other membrane proteins) is involved in the release of the membrane‐bound enzyme in part as a result of decreased surface hydrophobicity. (via Semantic Scholar)
UN Sustainable Development Goal Categories
6. Clean Water and Sanitation (OpenAlex)
Sources: ORCID, Web Of Science
Added: August 6, 2018

1996 journal article

Regulation of soybean nodule phosphoenolpyruvate carboxylase in vivo

Physiologia Plantarum, 97(3), 531–535.

By: C. Wadham, H. Winter & K. Schuller

Contributors: C. Wadham, H. Winter & K. Schuller

author keywords: glycine max; legume nodule; malate inhibition; nitrogen fixation; PEPC; protein phosphorylation; soybean
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: ORCID
Added: February 11, 2021

1994 journal article

Production and diurnal utilization of assimilates in leaves of spinach (Spinacia oleracea L.) and barley (Hordeum vulgare L.)

Planta, 192(4), 497–501.

By: B. Riens*, G. Lohaus*, H. Winter* & H. Heldt*

Contributors: B. Riens*, G. Lohaus*, H. Winter* & H. Heldt*

TL;DR: Taking into account the carbon consumption in the source leaves by dark respiration, it is evaluated that rates of assimilate export during the light period from spinach and barley leaves are reduced in the dark period to 16 μatom C−1 · h−1 in both species. (via Semantic Scholar)
Source: ORCID
Added: February 11, 2021

1994 journal article

Subcellular volumes and metabolite concentrations in spinach leaves

Planta, 193(4), 530–535.

By: H. Winter*, D. Robinson & H. Heldt*

Contributors: H. Winter*, D. Robinson & H. Heldt*

author keywords: AMINO ACID; SUCROSE CONCENTRATION; SPINACIA (LEAF); METABOLITE COMPARTMENTATION; SUBCELLULAR VOLUMES
TL;DR: From previous measurements of the subcellular levels of sucrose, of phosphorylated intermediates of carbohydrate metabolism, of malate, oxoglutarate and various amino acids in illuminated leaves, and the above sub cellular volumes, the corresponding subCellular metabolite concentrations have been determined. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: ORCID
Added: February 11, 2021

1993 journal article

Subcellular volumes and metabolite concentrations in barley leaves

Planta, 191(2), 180–190.

By: H. Winter*, D. Robinson* & H. Heldt*

Contributors: H. Winter*, D. Robinson* & H. Heldt*

TL;DR: Metabolite concentrations in sub cellular compartments from mature barley leaves after 9 h of illumination and 5 h of darkness were determined by nonaqueous fractionation and by the stereological evaluation of cellular and subcellular volumes from light and electron micrographs. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: ORCID
Added: February 11, 2021

1992 journal article

Phloem transport of amino acids in relation to their cytosolic levels in barley leaves

Plant Physiology, 99(3), 996–1004.

By: H. Winter*, G. Lohaus* & H. Heldt*

Contributors: H. Winter*, G. Lohaus* & H. Heldt*

TL;DR: It is concluded that the overall process of transfer of amino acids from the cytosol of the source cells into the sieve tubes, although carrier mediated, may be a passive process and that the translocation of amino acid via the sieving tubes requires the mass flow of sucrose driven by the active sucrose transport involved by the phloem loading. (via Semantic Scholar)
Source: ORCID
Added: February 11, 2021

Employment

Updated: February 10th, 2021 13:43

2002 - present

North Carolina State University Raleigh, NC, US
Professor Plant and Microbial Biology

Education

Updated: February 10th, 2021 13:52

1984 - 1993

Georg-August-Universität Göttingen Göttingen, Lower Saxony, DE
PhD Plant biochemistry

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