Jason Andrew Peiffer

Works (6)

Updated: August 4th, 2023 19:50

2014 journal article

Causes and Consequences of Genetic Background Effects Illuminated by Integrative Genomic Analysis

GENETICS, 196(4), 1321-+.

By: J. Peiffer, M. Romay, M. Gore, S. Flint-Garcia, Z. Zhang, M. Millard, C. Gardner, M. McMullen ...

author keywords: transcriptional profiling; introgression mapping; genetic background effects; mutant expressivity; modifier genes; epistasis
MeSH headings : Animals; Drosophila Proteins / genetics; Drosophila melanogaster / anatomy & histology; Drosophila melanogaster / genetics; Drosophila melanogaster / ultrastructure; Epistasis, Genetic; Gene Expression Regulation; Genes, Modifier; Genome, Insect; Genomics / methods; Inbreeding; Mutation; Phenotype; Polymorphism, Single Nucleotide; Quantitative Trait Loci; Transcription Factors / genetics; Wings, Animal / ultrastructure
TL;DR: This work generated multiple novel genome-level datasets from a mapping-by-introgression experiment and a tagged RNA gene expression dataset and integrated these data with previously published genomic datasets from expression microarrays and a modifier mutation screen to identify a robust set of candidate loci contributing to the background-dependent effects of mutations in SD. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2014 journal article

Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines

Genome Research, 24(7), 1193–1208.

By: W. Huang, A. Massouras, Y. Inoue, J. Peiffer, M. Ramia, A. Tarone, L. Turlapati, T. Zichner ...

Source: NC State University Libraries
Added: August 6, 2018

2014 journal article

The Genetic Architecture Of Maize Height

GENETICS, 196(4), 1337-+.

By: J. Peiffer n, M. Romay *, M. Gore *, S. Flint-Garcia *, Z. Zhang *, M. Millard*, C. Gardner *, M. McMullen* ...

Contributors: J. Peiffer n, M. Romay *, M. Gore *, S. Flint-Garcia *, Z. Zhang *, M. Millard*, C. Gardner *, M. McMullen* ...

author keywords: GBLUP; height; maize; plant
MeSH headings : Adaptation, Biological; Chromosome Mapping; Genetic Variation; Genome, Plant; Genome-Wide Association Study; Phenotype; Plant Stems / genetics; Plant Stems / physiology; Quantitative Trait Loci; Reproducibility of Results; Zea mays / genetics; Zea mays / growth & development; Zea mays / physiology
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Sources: Web Of Science, ORCID, NC State University Libraries, NC State University Libraries
Added: August 6, 2018

2013 journal article

Comprehensive genotyping of the USA national maize inbred seed bank

GENOME BIOLOGY, 14(6).

By: M. Romay *, M. Millard*, J. Glaubitz*, J. Peiffer n, K. Swarts *, T. Casstevens *, R. Elshire *, C. Acharya * ...

Contributors: M. Romay *, M. Millard*, J. Glaubitz*, J. Peiffer n, K. Swarts *, T. Casstevens *, R. Elshire *, C. Acharya * ...

author keywords: Diversity; Genotyping by sequencing; Germplasm; Maize; Public
MeSH headings : Alleles; Biological Specimen Banks; Breeding; Chromosome Mapping; Genetic Markers; Genome, Plant; Genotype; High-Throughput Nucleotide Sequencing; Linkage Disequilibrium; Phenotype; Polymorphism, Single Nucleotide; Quantitative Trait, Heritable; Seeds / classification; Seeds / genetics; United States; Zea mays / genetics
TL;DR: Genotyping by sequencing, a new low-cost, high-throughput sequencing technology was used to genotype 2,815 maize inbred accessions, preserved mostly at the National Plant Germplasm System in the USA, and identified trait associations at SNPs very close to known candidate genes for kernel color, sweet corn, and flowering time. (via Semantic Scholar)
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science; OpenAlex)
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2013 journal article

The genetic architecture of maize stalk strength

PLoS One, 8(6).

By: J. Peiffer, S. Flint-Garcia, N. De Leon, M. McMullen, S. Kaeppler & E. Buckler

Source: NC State University Libraries
Added: August 6, 2018

journal article

Genetic basis of transcriptome diversity in Drosophila melanogaster

Huang, W., Carbone, M. A., Magwire, M. M., Peiffer, J. A., Lyman, R. F., Stone, E. A., … Mackay, T. F. C. Proceedings of the National Academy of Sciences of the United States of America, 112(44), E6010–6019.

By: W. Huang, M. Carbone, M. Magwire, J. Peiffer, R. Lyman, E. Stone, R. Anholt, T. Mackay

Source: NC State University Libraries
Added: August 6, 2018

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