James Bruce White

Works (4)

Updated: April 23rd, 2025 20:56

2024 article

Seed endophytic bacterium Lysinibacillus sp. (ZM1) from maize (Zea mays L.) shapes its root architecture through modulation of auxin biosynthesis and nitrogen metabolism

Pal, G., Saxena, S., Kumar, K., Verma, A., Kumar, D., Shukla, P., … Verma, S. K. (2024, May 15). Plant Physiology and Biochemistry.

By: G. Pal n, S. Saxena*, K. Kumar*, A. Verma*, D. Kumar *, P. Shukla *, A. Pandey *, J. White*, S. Verma *

author keywords: Seed endophytic bacteria; Lysinibacillus sp.; Zea mays; Root architecture; Auxin modulation; Nitrogen metabolism
MeSH headings : Zea mays / microbiology; Zea mays / metabolism; Zea mays / growth & development; Indoleacetic Acids / metabolism; Nitrogen / metabolism; Plant Roots / microbiology; Plant Roots / metabolism; Bacillaceae / metabolism; Endophytes / metabolism; Endophytes / physiology; Seeds / microbiology; Seeds / metabolism; Seeds / growth & development; Seedlings / microbiology; Seedlings / metabolism; Seedlings / growth & development
topics (OpenAlex): Legume Nitrogen Fixing Symbiosis; Plant-Microbe Interactions and Immunity; Plant tissue culture and regeneration
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science; OpenAlex)
Source: Web Of Science
Added: June 24, 2024

2022 article

Asymmetrical lineage introgression and recombination in populations of Aspergillus flavus: Implications for biological control

Molo, M. S., White, J. B., Cornish, V., Gell, R. M., Baars, O., Singh, R., … Carbone, I. (2022, October 27). (W. C. Nierman, Ed.). PLoS ONE, Vol. 17.

By: M. Molo n, J. White n, V. Cornish n , R. Gell n, O. Baars n , R. Singh n, M. Carbone n , T. Isakeit * ...

Ed(s): W. Nierman

MeSH headings : Aspergillus flavus / genetics; Aflatoxins / genetics; Biological Control Agents; Zea mays / genetics; Zea mays / microbiology; Recombination, Genetic
topics (OpenAlex): Mycotoxins in Agriculture and Food; Plant Pathogens and Fungal Diseases; Plant Disease Resistance and Genetics
Sources: Web Of Science, ORCID, NC State University Libraries
Added: October 28, 2022

2019 journal article

T-BAS Version 2.1: Tree-Based Alignment Selector Toolkit for Evolutionary Placement of DNA Sequences and Viewing Alignments and Specimen Metadata on Curated and Custom Trees

Microbiology Resource Announcements, 8(29).

By: I. Carbone n , J. White n, J. Miadlikowska *, A. Arnold *, M. Miller *, N. Magain *, J. U'Ren *, F. Lutzoni *

Ed(s): C. Cuomo

topics (OpenAlex): Genomics and Phylogenetic Studies; Mycorrhizal Fungi and Plant Interactions; Plant Pathogens and Fungal Diseases
TL;DR: The Tree-Based Alignment Selector (T-BAS) toolkit combines phylogenetic-based placement of DNA sequences with alignment and specimen metadata visualization tools in an integrative pipeline for analyzing microbial biodiversity. (via Semantic Scholar)
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science; OpenAlex)
Sources: Web Of Science, NC State University Libraries, Crossref
Added: August 5, 2019

2016 journal article

T-BAS: Tree-Based Alignment Selector toolkit for phylogenetic-based placement, alignment downloads and metadata visualization: an example with the Pezizomycotina tree of life

Bioinformatics, 33(8), btw808.

By: I. Carbone n , J. White n, J. Miadlikowska *, A. Arnold *, M. Miller *, F. Kauff*, J. U'Ren *, G. May *, F. Lutzoni *

MeSH headings : Ascomycota / genetics; Endophytes / physiology; Genetic Loci; Metadata; Phylogeny; Sequence Alignment / methods; Software
topics (OpenAlex): Mycorrhizal Fungi and Plant Interactions; Plant Pathogens and Fungal Diseases; Lichen and fungal ecology
TL;DR: The Tree‐Based Alignment Selector (T‐BAS) toolkit is developed to allow evolutionary placement and visualization of diverse DNA sequences representing unknown taxa within a robust phylogenetic context, and to permit the downloading of highly curated, single‐ and multi‐locus alignments for specific clades. (via Semantic Scholar)
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries, Crossref
Added: August 6, 2018

Citation Index includes data from a number of different sources. If you have questions about the sources of data in the Citation Index or need a set of data which is free to re-distribute, please contact us.

Certain data included herein are derived from the Web of Science© and InCites© (2026) of Clarivate Analytics. All rights reserved. You may not copy or re-distribute this material in whole or in part without the prior written consent of Clarivate Analytics.