@article{kocher_ayroles_stone_grozinger_2010, title={Individual variation in pheromone response correlates with reproductive traits and brain gene expression in worker honey bees}, volume={5}, number={2}, journal={PLoS One}, author={Kocher, S. D. and Ayroles, J. F. and Stone, E. A. and Grozinger, C. M.}, year={2010} } @article{morozova_ayroles_jordan_duncan_carbone_lyman_stone_govindaraju_ellison_mackay_et al._2009, title={Alcohol sensitivity in Drosophila: Translational potential of systems genetics}, volume={183}, DOI={10.1534/genetics.109.107490}, number={2}, journal={Genetics}, author={Morozova, T. V. and Ayroles, J. F. and Jordan, K. W. and Duncan, L. H. and Carbone, M. A. and Lyman, R. E. and Stone, E. A. and Govindaraju, D. R. and Ellison, R. C. and Mackay, T. F. C. and et al.}, year={2009}, pages={733–745} } @article{harbison_carbone_ayroles_stone_lyman_mackay_2009, title={Co-regulated transcriptional networks contribute to natural genetic variation in Drosophila sleep}, volume={41}, DOI={10.1038/ng.330}, number={3}, journal={Nature Genetics}, author={Harbison, S. T. and Carbone, M. A. and Ayroles, J. F. and Stone, E. A. and Lyman, R. F. and MacKay, T. F. C.}, year={2009}, pages={371–375} } @article{stone_ayroles_2009, title={Modulated modularity clustering as an exploratory tool for functional genomic inference}, volume={5}, DOI={10.1371/journal.pgen.1000479}, number={5}, journal={PLoS Genetics}, author={Stone, E. A. and Ayroles, J. F.}, year={2009} } @article{ayroles_carbone_stone_jordan_lyman_magwire_rollmann_duncan_lawrence_anholt_et al._2009, title={Systems genetics of complex traits in Drosophila melanogaster}, volume={41}, DOI={10.1038/ng.332}, number={3}, journal={Nature Genetics}, author={Ayroles, J. F. and Carbone, M. A. and Stone, E. A. and Jordan, K. W. and Lyman, R. F. and Magwire, M. M. and Rollmann, S. M. and Duncan, L. H. and Lawrence, F. and Anholt, R. R. H. and et al.}, year={2009}, pages={299–307} } @misc{ayroles_gibson_2006, title={Analysis of variance of microarray data}, volume={411}, journal={Dna microarrays, part b: databases and statistics}, publisher={San Diego: Elsevier Academic Press Inc}, author={Ayroles, J. F. and Gibson, G.}, year={2006}, pages={214-} } @article{edwards_ayroles_stone_carbone_lyman_mackay, title={A transcriptional network associated with natural variation in Drosophila aggressive behavior}, volume={10}, number={7}, journal={Genome Biology}, author={Edwards, A. C. and Ayroles, J. F. and Stone, E. A. and Carbone, M. A. and Lyman, R. F. and Mackay, T. F. C.} } @article{huang_richards_carbone_zhu_anholt_ayroles_duncan_jordan_lawrence_magwire_et al., title={Epistasis dominates the genetic architecture of Drosophila quantitative traits}, volume={109}, number={39}, journal={Proceedings of the National Academy of Sciences of the United States of America}, author={Huang, W. and Richards, S. and Carbone, M. A. and Zhu, D. H. and Anholt, R. R. H. and Ayroles, J. F. and Duncan, L. and Jordan, K. W. and Lawrence, F. and Magwire, M. M. and et al.}, pages={15553–15559} } @article{ayroles_laflamme_stone_wolfner_mackay, title={Functional genome annotation of Drosophila seminal fluid proteins using transcriptional genetic networks}, volume={93}, number={6}, journal={Genetical Research}, author={Ayroles, J. F. and Laflamme, B. A. and Stone, E. A. and Wolfner, M. F. and Mackay, T. F. C.}, pages={387–395} } @article{carbone_ayroles_yamamoto_morozova_west_magwire_mackay_anholt, title={Overexpression of myocilin in the Drosophila eye activates the unfolded protein response: Implications for glaucoma}, volume={4}, number={1}, journal={PLoS One}, author={Carbone, M. A. and Ayroles, J. F. and Yamamoto, A. and Morozova, T. V. and West, S. A. and Magwire, M. M. and Mackay, T. F. C. and Anholt, R. R. H.} } @article{jumbo-lucioni_ayroles_chambers_jordan_leips_mackay_de_luca, title={Systems genetics analysis of body weight and energy metabolism traits in Drosophila melanogaster}, volume={11}, journal={BMC Genomics}, author={Jumbo-Lucioni, P. and Ayroles, J. F. and Chambers, M. M. and Jordan, K. W. and Leips, J. and Mackay, T. F. C. and De and Luca, M.} } @article{mackay_richards_stone_barbadilla_ayroles_zhu_casillas_han_magwire_cridland_et al., title={The Drosophila melanogaster genetic reference panel}, volume={482}, number={7384}, journal={Nature}, author={Mackay, T. F. C. and Richards, S. and Stone, E. A. and Barbadilla, A. and Ayroles, J. F. and Zhu, D. H. and Casillas, S. and Han, Y. and Magwire, M. M. and Cridland, J. M. and et al.}, pages={173–178} } @article{zwarts_vanden broeck_cappuyns_ayroles_magwire_vulsteke_clements_mackay_callaerts, title={The genetic basis of natural variation in mushroom body size in Drosophila melanogaster}, volume={6}, journal={Nature Communications}, author={Zwarts, L. and Vanden Broeck, L. and Cappuyns, E. and Ayroles, J. F. and Magwire, M. M. and Vulsteke, V. and Clements, J. and Mackay, T. F. C. and Callaerts, P.} } @misc{mackay_stone_ayroles, title={The genetics of quantitative traits: Challenges and prospects}, volume={10}, number={8}, journal={Nature Reviews. Genetics}, author={Mackay, T. F. C. and Stone, E. A. and Ayroles, J. F.}, pages={565–577} } @article{ober_ayroles_stone_richards_zhu_gibbs_stricker_gianola_schlather_mackay_et al., title={Using whole-genome sequence data to predict quantitative trait phenotypes in Drosophila melanogaster}, volume={8}, number={5}, journal={PLoS Genetics}, author={Ober, U. and Ayroles, J. F. and Stone, E. A. and Richards, S. and Zhu, D. H. and Gibbs, R. A. and Stricker, C. and Gianola, D. and Schlather, M. and Mackay, T. F. C. and et al.} }