James Holland
Holland, J. B., & Piepho, H.-P. (2024). Don't BLUP Twice. G3: Genes, Genomes, Genetics. https://doi.org/10.1093/g3journal/jkae250
Washburn, J. D., Varela, J. I., Xavier, A., Chen, Q., Ertl, D., Gage, J. L., … Leon, N. (2024, September 20). Global Genotype by Environment Prediction Competition Reveals That Diverse Modeling Strategies Can Deliver Satisfactory Maize Yield Estimates. https://doi.org/10.1101/2024.09.13.612969
Washburn, J. D., Varela, J. I., Xavier, A., Chen, Q., Ertl, D., Gage, J. L., … Leon, N. (2024). Global Genotype by Environment Prediction Competition Reveals That Diverse Modeling Strategies Can Deliver Satisfactory Maize Yield Estimates. GENETICS. https://doi.org/10.1093/genetics/iyae195
Costa, M., Holland, J. B., Leon, N., & Kaeppler, S. M. (2024, October 15). Impact of genotype x environment interaction and selection history on genomic prediction in maize (Zea mays L.). CROP SCIENCE, Vol. 10. https://doi.org/10.1002/csc2.21379
Woore, M. S., Flint-Garcia, S. A., & Holland, J. B. (2024, February 15). Phenotypic characterization of Southeastern United States open-pollinated maize landraces. CROP SCIENCE, Vol. 2. https://doi.org/10.1002/csc2.21198
Hudson, O., Resende Jr, M. F. R., Messina, C., Holland, J., & Brawner, J. (2024). Prediction of resistance, virulence, and host-by-pathogen interactions using dual-genome prediction models. THEORETICAL AND APPLIED GENETICS, 137(8). https://doi.org/10.1007/s00122-024-04698-7
Lima, D. C., Aviles, A. C., Alpers, R. T., McFarland, B. A., Kaeppler, S., Ertl, D., … Leon, N. (2023). 2018-2019 field seasons of the Maize Genomes to Fields (G2F) G x E project. BMC GENOMIC DATA, 24(1). https://doi.org/10.1186/s12863-023-01129-2
Lima, D. C., Aviles, A. C., Alpers, R. T., Perkins, A., Schoemaker, D. L., Costa, M., … Leon, N. (2023, September 14). 2020-2021 field seasons of Maize GxE project within the Genomes to Fields Initiative. BMC RESEARCH NOTES, Vol. 16. https://doi.org/10.1186/s13104-023-06430-y
DeWitt, N., Lyerly, J., Guedira, M., Holland, J. B., Ward, B. P., Murphy, J. P., … Brown-Guedira, G. (2023, March 1). Bearded or smooth? Awns improve yield when wheat experiences heat stress during grain fill. https://doi.org/10.1101/2023.02.27.530138
DeWitt, N., Lyerly, J., Guedira, M., Holland, J. B., Murphy, J. P., Ward, B. P., … Brown-Guedira, G. (2023). Bearded or smooth? Awns improve yield when wheat experiences heat stress during grain fill in the southeastern United States. JOURNAL OF EXPERIMENTAL BOTANY, 74(21), 6749–6759. https://doi.org/10.1093/jxb/erad318
Samira, R., Lopez, L. F. S., Holland, J., & Balint-Kurti, P. J. (2023, January 16). Characterization of a Host-Specific Toxic Activity Produced by Bipolaris cookei, Causal Agent of Target Leaf Spot of Sorghum. PHYTOPATHOLOGY, Vol. 1. https://doi.org/10.1094/PHYTO-11-22-0427
Samira, R., Samayoa, L. F., Holland, J., & Balint-Kurti, P. J. (2023). Characterization of a host-specific toxic activity produced by Bipolaris cookei, causal agent of Target Leaf Spot of Sorghum. Phytopathology®, 113(7), 1301–1306. https://doi.org/10.1094/PHYTO-11-22-0427-R
Choquette, N. E., Weldekidan, T., Brewer, J., Davis, S. B., Wisser, R. J., & Holland, J. B. (2023, June 27). Enhancing adaptation of tropical maize to temperate environments using genomic selection (A. Lipka, Ed.). G3-GENES GENOMES GENETICS, Vol. 6. https://doi.org/10.1093/g3journal/jkad141
Choquette, N. E., Holland, J. B., Weldekidan, T., Drouault, J., Leon, N., Flint-Garcia, S., … Wisser, R. J. (2023, February 25). Environment-specific selection alters flowering-time plasticity and results in pervasive pleiotropic responses in maize. NEW PHYTOLOGIST, Vol. 2. https://doi.org/10.1111/nph.18769
Lima, D. C., Washburn, J. D., Varela, J. I., Chen, Q., Gage, J. L., Romay, M. C., … Leon, N. (2023, July 17). Genomes to Fields 2022 Maize genotype by Environment Prediction Competition. BMC RESEARCH NOTES, Vol. 16. https://doi.org/10.1186/s13104-023-06421-z
Tittes, S., Lorant, A., McGinty, S., Holland, J. B., Jesus Sánchez-González, J., Seetharam, A., … Ross-Ibarra, J. (2023, November 21). Not so local: the population genetics of convergent adaptation in maize and teosinte. https://doi.org/10.7554/eLife.92405.1
Tittes, S., Lorant, A., McGinty, S., Holland, J. B., Jesus Sánchez-González, J., Seetharam, A., … Ross-Ibarra, J. (2023, November 21). Not so local: the population genetics of convergent adaptation in maize and teosinte. https://doi.org/10.7554/eLife.92405
Dobbs, A. M., Sousa-Ortega, C., Holland, J. B., Snyder, L. U., & Leon, R. G. (2023, December 9). Variability structure and heritability of germination timing in Capsella bursa-pastoris (L.) Medik. (Shepherd's purse). WEED RESEARCH, Vol. 12. https://doi.org/10.1111/wre.12605
Butoto, E. N., Brewer, J. C., & Holland, J. B. (2022, July 4). Empirical comparison of genomic and phenotypic selection for resistance to Fusarium ear rot and fumonisin contamination in maize. THEORETICAL AND APPLIED GENETICS, Vol. 7. https://doi.org/10.1007/s00122-022-04150-8
Rogers, A. R., Bian, Y., Krakowsky, M., Peters, D., Turnbull, C., Nelson, P., & Holland, J. B. (2022, October 24). Genomic prediction for the Germplasm Enhancement of Maize project. PLANT GENOME, Vol. 10. https://doi.org/10.1002/tpg2.20267
Billings, G. T., Jones, M. A., Rustgi, S., Bridges, W. C., Holland, J. B., Hulse-Kemp, A. M., & Campbell, B. T. (2022). Outlook for Implementation of Genomics-Based Selection in Public Cotton Breeding Programs. PLANTS-BASEL, 11(11). https://doi.org/10.3390/plants11111446
Holland, J. (2022, August 11). Saving Genetic Diversity in Seed Banks. https://doi.org/10.52750/958664
Holland, J. (2022, August 11). The History of Maize. https://doi.org/10.52750/273626
Chen, Q., Samayoa, L. F., Yang, C. J., Olukolu, B. A., York, A. M., Sanchez-Gonzalez, J. de J., … Doebley, J. F. (2021). A conserved genetic architecture among populations of the maize progenitor, teosinte, was radically altered by domestication. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 118(43). https://doi.org/10.1073/pnas.2112970118j1of10
DeWitt, N., Guedira, M., Lauer, E., Murphy, J. P., Marshall, D., Mergoum, M., … Brown-Guedira, G. (2021). Characterizing the oligogenic architecture of plant growth phenotypes informs genomic selection approaches in a common wheat population. BMC GENOMICS, 22(1). https://doi.org/10.1186/s12864-021-07574-6
Holland, J. B., Samayoa, L. F., Olukolu, B. A., Yang, C. J., Chen, Q., Stetter, M. G., … Doebley, J. F. (2021, September 2). Domestication Reshaped the Genetic Basis of Inbreeding Depression in a Maize Landrace Compared to its Wild Relative, Teosinte. BioRxiv, Vol. 9. https://doi.org/10.1101/2021.09.01.458502
Samayoa, L. F., Olukolu, B. A., Yang, C. J., Chen, Q., Stetter, M. G., York, A. M., … Holland, J. B. (2021). Domestication reshaped the genetic basis of inbreeding depression in a maize landrace compared to its wild relative, teosinte. PLOS GENETICS, 17(12). https://doi.org/10.1371/journal.pgen.1009797
Chiango, H., Jafarikouhini, N., Pradhan, D., Figueiredo, A., Silva, J., Sinclair, T. R., & Holland, J. (2021, August 5). Drought resilience in CIMMYT maize lines adapted to Africa resulting from transpiration sensitivity to vapor pressure deficit and soil drying. JOURNAL OF CROP IMPROVEMENT, Vol. 8. https://doi.org/10.1080/15427528.2021.1961334
Butoto, E. N., Marino, T. P., & Holland, J. B. (2021, June 18). Effects of artificial inoculation on trait correlations with resistance to Fusarium ear rot and fumonisin contamination in maize. CROP SCIENCE, Vol. 5. https://doi.org/10.1002/csc2.20551
Rogers, A. R., & Holland, J. B. (2022). Environment-specific genomic prediction ability in maize using environmental covariates depends on environmental similarity to training data. G3-GENES GENOMES GENETICS, 12(2). https://doi.org/10.1093/g3journal/jkab440
Tittes, S., Lorant, A., McGinty, S., Holland, J. B., Jesus Sánchez-González, J., Seetharam, A., … Ross-Ibarra, J. (2021, September 10). Not so local: the population genetics of convergent adaptation in maize and teosinte. https://doi.org/10.1101/2021.09.09.459637
Lauer, E., Holland, J., & Isik, F. (2022). Prediction ability of genome-wide markers in Pinus taeda L. within and between population is affected by relatedness to the training population and trait genetic architecture. G3-GENES GENOMES GENETICS, 12(2). https://doi.org/10.1093/g3journal/jkab405
Weldekidan, T., Manching, H., Choquette, N., Leon, N., Flint-Garcia, S., Holland, J., … Wisser, R. J. (2021, October 13). Registration of tropical populations of maize selected in parallel for early flowering time across the United States. JOURNAL OF PLANT REGISTRATIONS, Vol. 10. https://doi.org/10.1002/plr2.20181
Rogers, A. R., Dunne, J. C., Romay, C., Bohn, M., Buckler, E. S., Ciampitti, I. A., … Holland, J. B. (2021). The importance of dominance and genotype-by-environment interactions on grain yield variation in a large-scale public cooperative maize experiment. G3-GENES GENOMES GENETICS, 11(2). https://doi.org/10.1093/g3journal/jkaa050
Woore, M. S., Flint-Garcia, S. A., & Holland, J. B. (2021, September 19). The potential to breed a low-protein maize for protein-restricted diets. CROP SCIENCE, Vol. 61. https://doi.org/10.1002/csc2.20600
Jarquin, D., Leon, N., Romay, C., Bohn, M., Buckler, E. S., Ciampitti, I., … Lorenz, A. (2021). Utility of Climatic Information via Combining Ability Models to Improve Genomic Prediction for Yield Within the Genomes to Fields Maize Project. FRONTIERS IN GENETICS, 11. https://doi.org/10.3389/fgene.2020.592769
Stagnati, L., Rahjoo, V., Samayoa, L. F., Holland, J. B., Borrelli, V. M. G., Busconi, M., … Marocco, A. (2020). A Genome-Wide Association Study To Understand the Effect of Fusarium verticillioides Infection on Seedlings of a Maize Diversity Panel. G3-GENES GENOMES GENETICS, 10(5), 1685–1696. https://doi.org/10.1534/g3.119.400987
Kuki, M. C., Barth Pinto, R. J., Bengosi Bertagna, F. A., Tessmann, D. J., Amaral Junior, A. T., Scapim, C. A., & Holland, J. B. (2020). Association mapping and genomic prediction for ear rot disease caused by Fusarium verticillioides in a tropical maize germplasm. CROP SCIENCE, 60(6), 2867–2881. https://doi.org/10.1002/csc2.20272
Ramstein, G. P., Larsson, S. J., Cook, J. P., Edwards, J. W., Ersoz, E. S., Flint-Garcia, S., … Romay, M. C. (2020). Dominance Effects and Functional Enrichments Improve Prediction of Agronomic Traits in Hybrid Maize. GENETICS, 215(1), 215–230. https://doi.org/10.1534/genetics.120.303025
Diepenbrock, C. H., Ilut, D. C., Magallanes-Lundback, M., Kandianis, C. B., Lipka, A. E., Bradbury, P. J., … DellaPenna, D. (2020, July 15). Eleven biosynthetic genes explain the majority of natural variation for carotenoid levels in maize grain (Vol. 7). Vol. 7. https://doi.org/10.1101/2020.07.15.203448
Diepenbrock, C. H., Ilut, D. C., Magallanes-Lundback, M., Kandianis, C. B., Lipka, A. E., Bradbury, P. J., … DellaPenna, D. (2021). Eleven biosynthetic genes explain the majority of natural variation in carotenoid levels in maize grain. PLANT CELL, 33(4), 882–900. https://doi.org/10.1093/plcell/koab032
DeWitt, N., Guedira, M., Lauer, E., Murphy, J. P., Marshall, D., Mergoum, M., … Brown-Guedira, G. (2020, December 16). Genetic variation for plant growth traits in a common wheat population is dominated by known variants and novel QTL. https://doi.org/10.1101/2020.12.16.422696
Woore, M. S., & Holland, J. B. (2020). Genetic variation for response to mixed triazole and strobilurin application in diverse maize. Agrosystems, Geosciences & Environment, 3(1). https://doi.org/10.1002/agg2.20054
Samira, R., Kimball, J. A., Samayoa, L. F., Holland, J. B., Jamann, T. M., Brown, P. J., … Balint-Kurti, P. J. (2020). Genome-wide association analysis of the strength of the MAMP-elicited defense response and resistance to target leaf spot in sorghum. Scientific Reports, 10(1). https://doi.org/10.1038/s41598-020-77684-w
Holland, J. B., Marino, T. P., Manching, H. C., & Wisser, R. J. (2020). Genomic prediction for resistance to Fusarium ear rot and fumonisin contamination in maize. CROP SCIENCE, 60(4), 1863–1875. https://doi.org/10.1002/csc2.20163
Wagner, M. R., Roberts, J. H., Balint‐Kurti, P., & Holland, J. B. (2020). Heterosis of leaf and rhizosphere microbiomes in field‐grown maize. New Phytologist, 228(3), 1055–1069. https://doi.org/10.1111/nph.16730
McFarland, B. A., Alkhalifah, N., Bohn, M., Bubert, J., Buckler, E. S., Ciampitti, I., … De Leon, N. (2020). Maize genomes to fields (G2F): 2014-2017 field seasons: Genotype, phenotype, climatic, soil, and inbred ear image datasets. BMC Research Notes, 13(1). https://doi.org/10.1186/s13104-020-4922-8
Falcon, C. M., Kaeppler, S. M., Spalding, E. P., Miller, N. D., Haase, N., AlKhalifah, N., … Leon, N. (2020). Relative utility of agronomic, phenological, and morphological traits for assessing genotype-by-environment interaction in maize inbreds. Crop Science, 60(1), 62–81. https://doi.org/10.1002/csc2.20035
Chen, Q., Samayoa, L. F., Yang, C. J., Bradbury, P. J., Olukolu, B. A., Neumeyer, M. A., … Doebley, J. F. (2020). The genetic architecture of the maize progenitor, teosinte, and how it was altered during maize domestication. PLOS GENETICS, 16(5). https://doi.org/10.1371/journal.pgen.1008791
Morales, L., Zila, C. T., Mejia, D. E. M., Arbelaez, M. M., Balint-Kurti, P. J., Holland, J. B., & Nelson, R. J. (2019). Diverse Components of Resistance to Fusarium verticillioides Infection and Fumonisin Contamination in Four Maize Recombinant Inbred Families. TOXINS, 11(2). https://doi.org/10.3390/toxins11020086
Camargo Senhorinho, H. J., Dacal Coan, M. M., Marino, T. P., Kuki, M. C., Barth Pinto, R. J., Scapim, C. A., & Holland, J. B. (2019). Genomic-Wide Association Study of Popping Expansion in Tropical Popcorn and Field Corn Germplasm. CROP SCIENCE, 59(5), 2007–2019. https://doi.org/10.2135/cropsci2019.02.0101
Guo, T., Yu, X., Li, X., Zhang, H., Zhu, C., Flint-Garcia, S., … Yu, J. (2019). Optimal Designs for Genomic Selection in Hybrid Crops. MOLECULAR PLANT, 12(3), 390–401. https://doi.org/10.1016/j.molp.2018.12.022
Wisser, R. J., Fang, Z., Holland, J. B., Teixeira, J. E. C., Dougherty, J., Weldekidan, T., … Hallauer, A. (2019). The Genomic Basis for Short-Term Evolution of Environmental Adaptation in Maize. GENETICS, 213(4), 1479–1494. https://doi.org/10.1534/genetics.119.302780
Yang, C. J., Samayoa, L. F., Bradbury, P. J., Olukolu, B. A., Xue, W., York, A. M., … Doebley, J. F. (2019). The genetic architecture of teosinte catalyzed and constrained maize domestication. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 116(12), 5643–5652. https://doi.org/10.1073/pnas.1820997116
Sarinelli, J. M., Murphy, J. P., Tyagi, P., Holland, J. B., Johnson, J. W., Mergoum, M., … Brown-Guedira, G. (2019). Training population selection and use of fixed effects to optimize genomic predictions in a historical USA winter wheat panel. THEORETICAL AND APPLIED GENETICS, 132(4), 1247–1261. https://doi.org/10.1007/s00122-019-03276-6
Martins, L. B., Rucker, E., Thomason, W., Wisser, R. J., Holland, J. B., & Balint-Kurti, P. (2019). Validation and Characterization of Maize Multiple Disease Resistance QTL. G3 Genes|Genomes|Genetics, 9(9), 2905–2912. https://doi.org/10.1534/g3.119.400195
Stagnati, L., Lanubile, A., Samayoa, L. F., Bragalanti, M., Giorni, P., Busconi, M., … Marocco, A. (2019). A Genome Wide Association Study Reveals Markers and Genes Associated with Resistance to Fusarium verticillioides Infection of Seedlings in a Maize Diversity Panel. G3-GENES GENOMES GENETICS, 9(2), 571–579. https://doi.org/10.1534/g3.118.200916
Ovenden, B., Milgate, A., Wade, L. J., Rebetzke, G. J., & Holland, J. B. (2018). Accounting for Genotype-by-Environment Interactions and Residual Genetic Variation in Genomic Selection for Water-Soluble Carbohydrate Concentration in Wheat. G3-GENES GENOMES GENETICS, 8(6), 1909–1919. https://doi.org/10.1534/g3.118.200038
Morales, L., Marino, T. P., Wenndt, A. J., Fouts, J. Q., Holland, J. B., & Nelson, R. J. (2018). Dissecting Symptomatology and Fumonisin Contamination Produced by Fusarium verticillioides in Maize Ears. PHYTOPATHOLOGY, 108(12), 1475–1485. https://doi.org/10.1094/PHYTO-05-18-0167-R
Sanchez Gonzalez, J. de J., Ruiz Corral, J. A., Medina Garcia, G., Ramirez Ojeda, G., Cruz Larios, L., Holland, J. B., … Garcia Romero, G. E. (2018). Ecogeography of teosinte. PLOS ONE, 13(2). https://doi.org/10.1371/journal.pone.0192676
Harnessing Maize Biodiversity. (2018). In Compendium of Plant Genomes. https://doi.org/10.1007/978-3-319-97427-9_20
Alkhalifah, N., Campbell, D. A., Falcon, C. M., Gardiner, J. M., Miller, N. D., Romay, M. C., … Lawrence-Dill, C. J. (2018). Maize Genomes to Fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets. BMC Research Notes, 11(1). https://doi.org/10.1186/s13104-018-3508-1
Holland, J. B. (2018, September 24). Plant Genetics: Two Steps on the Path to Maize Adaptation. CURRENT BIOLOGY, Vol. 28, pp. R1098–R1101. https://doi.org/10.1016/j.cub.2018.07.049
Wills, D. M., Fang, Z., York, A. M., Holland, J. B., & Doebley, J. F. (2018). Defining the Role of the MADS-Box Gene, Zea Agamous-like1, a Target of Selection During Maize Domestication. JOURNAL OF HEREDITY, 109(3), 333–338. https://doi.org/10.1093/jhered/esx073
Bian, Y., & Holland, J. B. (2017). Enhancing genomic prediction with genome-wide association studies in multiparental maize populations. HEREDITY, 118(6), 585–593. https://doi.org/10.1038/hdy.2017.4
Isik, F., Holland, J., & Maltecca, C. (2017). Genetic Data Analysis for Plant and Animal Breeding. https://doi.org/10.1007/978-3-319-55177-7
Ovenden, B., Milgate, A., Wade, L. J., Rebetzke, G. J., & Holland, J. B. (2017). Genome-Wide Associations for Water-Soluble Carbohydrate Concentration and Relative Maturity in Wheat Using SNP and DArT Marker Arrays. G3-GENES GENOMES GENETICS, 7(8), 2821–2830. https://doi.org/10.1534/g3.117.039842
Swarts, K., Gutaker, R. M., Benz, B., Blake, M., Bukowski, R., Holland, J., … Burbano, H. A. (2017). Genomic estimation of complex traits reveals ancient maize adaptation to temperate North America. SCIENCE, 357(6350), 512–515. https://doi.org/10.1126/science.aam9425
Jamann, T. M., Sood, S., Wisser, R. J., & Holland, J. B. (2017). High-Throughput Resequencing of Maize Landraces at Genomic Regions Associated with Flowering Time. PLOS ONE, 12(1). https://doi.org/10.1371/journal.pone.0168910
Ovenden, B., Milgate, A., Lisle, C., Wade, L. J., Rebetzke, G. J., & Holland, J. B. (2017). Selection for water-soluble carbohydrate accumulation and investigation of genetic x environment interactions in an elite wheat breeding population. THEORETICAL AND APPLIED GENETICS, 130(11), 2445–2461. https://doi.org/10.1007/s00122-017-2969-2
Gage, J. L., Jarquin, D., Romay, C., Lorenz, A., Buckler, E. S., Kaeppler, S., … Leon, N. (2017). The effect of artificial selection on phenotypic plasticity in maize. NATURE COMMUNICATIONS, 8(1). https://doi.org/10.1038/s41467-017-01450-2
Morales, L., Wenndt, A., Marino, T., Holland, J., & Nelson, R. (2017). Variation in the Fusarium verticilloides-maize pathosystem and implications for sorting mycotoxin-contaminated maize grain. Phytopathology, 107(2), 11–11.
Xue, S., Bradbury, P. J., Casstevens, T., & Holland, J. B. (2016). Genetic Architecture of Domestication-Related Traits in Maize. GENETICS, 204(1), 99-+. https://doi.org/10.1534/genetics.116.191106
Andres, R. J., Coneva, V., Frank, M. H., Tuttle, J. R., Samayoa, L. F., Han, S. W., … Kuraparthy, V. (2017). Modifications to a LATE MERISTEM IDENTITY1 gene are responsible for the major leaf shapes of Upland cotton (Gossypium hirsutum L.). Proceedings of the National Academy of Sciences of the United States of America, 114(1), E57–66. https://doi.org/10.1101/062612
Andres, R. J., Coneva, V., Frank, M. H., Tuttle, J. R., Samayoa, L. F., Han, S.-W., … Kuraparthy, V. (2016). Modifications to a LATE MERISTEM IDENTITY1 gene are responsible for the major leaf shapes of Upland cotton (Gossypium hirsutum L.). Proceedings of the National Academy of Sciences, 114(1), E57–E66. https://doi.org/10.1073/pnas.1613593114
Rebetzke, G. J., Richards, R. A., & Holland, J. B. (2017). Population extremes for assessing trait value and correlated response of genetically complex traits. Field Crops Research, 201, 122–132. https://doi.org/10.1016/j.fcr.2016.10.019
Olukolu, B. A., Bian, Y., De Vries, B., Tracy, W. F., Wisser, R. J., Holland, J. B., & Balint-Kurti, P. J. (2016). The Genetics of Leaf Flecking in Maize and Its Relationship to Plant Defense and Disease Resistance. Plant Physiology, 172(3), 1787–1803. https://doi.org/10.1104/pp.15.01870
Holland, J., Graham, G. I., Murphy, J. P., & Lynn, M. (2015). Charles W. Stuber: Maize Geneticist and Pioneer of Marker-Assisted Selection. Plant Breeding Reviews, Vol 39, 39, 1–22. https://doi.org/10.1002/9781119107743.ch1
Holland, J. B., Graham, G. I., Murphy, J. P., & Senior, M. L. (2015). Charles W. Stuber: Maize Geneticist and Pioneer of Marker-Assisted Selection. In Plant Breeding Reviews (Vol. 39, pp. 1–22). https://doi.org/10.1002/9781119107743.ch01
Bian, Y., & Holland, J. B. (2015). Ensemble Learning of QTL Models Improves Prediction of Complex Traits. G3-GENES GENOMES GENETICS, 5(10), 2073–2084. https://doi.org/10.1534/g3.115.021121
Nelson, P. T., Krakowsky, M. D., Coles, N. D., Holland, J. B., Bubeck, D. M., Smith, J. S. C., & Goodman, M. M. (2016). Genetic Characterization of the North Carolina State University Maize Lines. CROP SCIENCE, 56(1), 259–275. https://doi.org/10.2135/cropsci2015.09.0532
Samayoa, L. F., Malvar, R. A., Olukolu, B. A., Holland, J. B., & Butron, A. (2015). Genome-wide association study reveals a set of genes associated with resistance to the Mediterranean corn borer (Sesamia nonagrioides L.) in a maize diversity panel. BMC PLANT BIOLOGY, 15(1). https://doi.org/10.1186/s12870-014-0403-3
Ogut, F., Bian, Y., Bradbury, P. J., & Holland, J. B. (2015). Joint-multiple family linkage analysis predicts within-family variation better than single-family analysis of the maize nested association mapping population. HEREDITY, 114(6), 552–563. https://doi.org/10.1038/hdy.2014.123
Holland, J. B. (2015, September 11). MAGIC maize: a new resource for plant genetics. GENOME BIOLOGY, Vol. 16. https://doi.org/10.1186/s13059-015-0713-2
Balint-Kurti, P. J., & Holland, J. B. (2015). New insight into a complex plant–fungal pathogen interaction. Nature Genetics, 47(2), 101–103. https://doi.org/10.1038/ng.3203
Jamann, T. M., Balint-Kurti, P. J., & Holland, J. B. (2015). QTL Mapping Using High-Throughput Sequencing. https://doi.org/10.1007/978-1-4939-2444-8_13
Pratt, R. C., Holland, J. B., Balint-Kurti, P. J., Coles, N. D., Zwonitzer, J. C., Casey, M. A., & McMullen, M. D. (2015). Registration of the Ki14 × B73 Recombinant Inbred Mapping Population of Maize. Journal of Plant Registrations, 9(2), 262–265. https://doi.org/10.3198/jpr2014.06.0041crmp
Horne, D. W., Eller, M. S., & Holland, J. B. (2016). Responses to Recurrent Index Selection for Reduced Fusarium Ear Rot and Lodging and for Increased Yield in Maize. CROP SCIENCE, 56(1), 85–94. https://doi.org/10.2135/cropsci2015.06.0333
Olukolu, B. A., Wang, G.-F., Vontimitta, V., Venkata, B. P., Marla, S., Ji, J., … Johal, G. (2014). A Genome-Wide Association Study of the Maize Hypersensitive Defense Response Identifies Genes That Cluster in Related Pathways. PLoS Genetics, 10(8), e1004562. https://doi.org/10.1371/journal.pgen.1004562
Goodman, M. M., Holland, J. B., & Sánchez G, J. J. (2014). Breeding and genetic diversity. In Genetics, Genomics and Breeding of Maize (pp. 14–50). https://doi.org/10.1201/b17274
Holland, J. B. (2014). Breeding: Plants, Modern. In Encyclopedia of Agriculture and Food Systems (pp. 187–200). https://doi.org/10.1016/B978-0-444-52512-3.00226-6
Peiffer, J. A., Romay, M. C., Gore, M. A., Flint-Garcia, S. A., Zhang, Z. W., Millard, M. J., … Buckler, E. S. (2014). Causes and Consequences of Genetic Background Effects Illuminated by Integrative Genomic Analysis. GENETICS, 196(4), 1321-+. https://doi.org/10.1534/genetics.113.159426
Zila, C. T., Ogut, F., Romay, M. C., Gardner, C. A., Buckler, E. S., & Holland, J. B. (2014). Genome-wide association study of Fusarium ear rot disease in the USA maize inbred line collection. BMC PLANT BIOLOGY, 14(1). https://doi.org/10.1186/s12870-014-0372-6
Teixeira, J. E. C., Weldekidan, T., Leon, N., Flint-Garcia, S., Holland, J. B., Lauter, N., … Wisser, R. J. (2015). Hallauer's Tuson: a decade of selection for tropical-to-temperate phenological adaptation in maize. HEREDITY, 114(2), 229–240. https://doi.org/10.1038/hdy.2014.90
Hirsch, C. N., Flint-Garcia, S. A., Beissinger, T. M., Eichten, S. R., Deshpande, S., Barry, K., … Kaeppler, S. M. (2014). Insights into the effects of long-term artificial selection on seed size in maize. Genetics, 198(1), 409-. https://doi.org/10.1534/genetics.114.167155
Bian, Y., Yang, Q., Balint-Kurti, P. J., Wisser, R. J., & Holland, J. B. (2014). Limits on the reproducibility of marker associations with southern leaf blight resistance in the maize nested association mapping population. BMC GENOMICS, 15(1). https://doi.org/10.1186/1471-2164-15-1068
Yu, J., Roy, S. K., Kamal, A. H. M., Cho, K., Kwon, S.-J., Cho, S.-W., … Woo, S. H. (2014). Protein profiling reveals novel proteins in pollen and pistil of W22 (ga1; Ga1) in maize. Proteomes, 2(2), 258–271. https://doi.org/10.3390/proteomes2020258
Peiffer, J. A., Romay, M. C., Gore, M. A., Flint-Garcia, S. A., Zhang, Z., Millard, M. J., … Buckler, E. S. (2014). The Genetic Architecture Of Maize Height. GENETICS, 196(4), 1337-+. https://doi.org/10.1534/genetics.113.159152
Santa-Cruz, J. H., Kump, K. L., Arellano, C., Goodman, M. M., Krakowsky, M. D., Holland, J. B., & Balint-Kurti, P. J. (2014). Yield effects of two southern leaf blight resistance loci in maize hybrids. Crop Science, 54(3), 882–894. https://doi.org/10.2135/cropsci2013.08.0553
Zila, C. T., Fernando Samayoa, L., Santiago, R., Butron, A., & Holland, J. B. (2013). A Genome-Wide Association Study Reveals Genes Associated with Fusarium Ear Rot Resistance in a Maize Core Diversity Panel. G3-GENES GENOMES GENETICS, 3(11), 2095–2104. https://doi.org/10.1534/g3.113.007328
Romay, M. C., Millard, M. J., Glaubitz, J. C., Peiffer, J. A., Swarts, K. L., Casstevens, T. M., … Gardner, C. A. (2013). Comprehensive genotyping of the USA national maize inbred seed bank. GENOME BIOLOGY, 14(6). https://doi.org/10.1186/gb-2013-14-6-r55
Willcox, M. C., Davis, G. L., Warburton, M. L., Windham, G. L., Abbas, H. K., Betrán, J., … Williams, W. P. (2013). Confirming quantitative trait loci for aflatoxin resistance from Mp313E in different genetic backgrounds. Molecular Breeding, 32(1), 15–26. https://doi.org/10.1007/s11032-012-9821-9
Sood, S., Flint-Garcia, S., Willcox, M. C., & Holland, J. B. (2014). Mining natural variation for maize improvement: Selection on phenotypes and genes. In Genomics of Plant Genetic Resources: Volume 1. Managing, Sequencing and Mining Genetic Resources (pp. 615–649). https://doi.org/10.1007/978-94-007-7572-5_25
Olukolu, B. A., Negeri, A., Dhawan, R., Venkata, B. P., Sharma, P., Garg, A., … Balint-Kurti, P. (2013). A Connected Set of Genes Associated with Programmed Cell Death Implicated in Controlling the Hypersensitive Response in Maize. GENETICS, 193(2), 609-+. https://doi.org/10.1534/genetics.112.147595
Hung, H.-Y., & Holland, J. B. (2012). Diallel Analysis of Resistance to Fusarium Ear Rot and Fumonisin Contamination in Maize. CROP SCIENCE, 52(5), 2173–2181. https://doi.org/10.2135/cropsci2012.03.0154
Chia, J.-M., Song, C., Bradbury, P. J., Costich, D., De Leon, N., Doebley, J., … Ware, D. (2012). Maize HapMap2 identifies extant variation from a genome in flux. Nature Genetics, 44(7), 803–807. https://doi.org/10.1038/ng.2313
Veturi, Y., Kump, K., Walsh, E., Ott, O., Poland, J., Kolkman, J. M., … Wisser, R. J. (2012). Multivariate Mixed Linear Model Analysis of Longitudinal Data: An Information-Rich Statistical Technique for Analyzing Plant Disease Resistance. PHYTOPATHOLOGY, 102(11), 1016–1025. https://doi.org/10.1094/phyto-10-11-0268
Hizbai, B. T., Gardner, K. M., Wight, C. P., Dhanda, R. K., Molnar, S. J., Johnson, D., … Tinker, N. A. (2012). Quantitative Trait Loci Affecting Oil Content, Oil Composition, and Other Agronomically Important Traits in Oat. PLANT GENOME, 5(3), 164–175. https://doi.org/10.3835/plantgenome2012.07.0015
Hung, H.-Y., Shannon, L. M., Tian, F., Bradbury, P. J., Chen, C., Flint-Garcia, S. A., … Holland, J. B. (2012). ZmCCT and the genetic basis of day-length adaptation underlying the postdomestication spread of maize. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 109(28), E1913–E1921. https://doi.org/10.1073/pnas.1203189109
Wisser, R. J., Balint-Kurti, P. J., & Holland, J. B. (2011). A novel genetic framework for studying response to artificial selection. PLANT GENETIC RESOURCES-CHARACTERIZATION AND UTILIZATION, 9(2), 281–283. https://doi.org/10.1017/s1479262111000359
Coles, N. D., Zila, C. T., & Holland, J. B. (2011). Allelic Effect Variation at Key Photoperiod Response Quantitative Trait Loci in Maize. CROP SCIENCE, 51(3), 1036–1049. https://doi.org/10.2135/cropsci2010.08.0488
Jumbo, M. D., Weldekidan, T., Holland, J. B., & Hawk, J. A. (2011). Comparison of Conventional, Modified Single Seed Descent, and Doubled Haploid Breeding Methods for Maize Inbred Line Development Using Germplasm Enhancement of Maize Breeding Crosses. CROP SCIENCE, 51(4), 1534–1543. https://doi.org/10.2135/cropsci2010.10.0594
Brown, P. J., Upadyayula, N., Mahone, G. S., Tian, F., Bradbury, P. J., Myles, S., … Rocheford, T. R. (2011). Distinct Genetic Architectures for Male and Female Inflorescence Traits of Maize. PLOS GENETICS, 7(11). https://doi.org/10.1371/journal.pgen.1002383
Cook, J. P., McMullen, M. D., Holland, J. B., Tian, F., Bradbury, P., Ross-Ibarra, J., … Flint-Garcia, S. A. (2012). Genetic Architecture of Maize Kernel Composition in the Nested Association Mapping and Inbred Association Panels. PLANT PHYSIOLOGY, 158(2), 824–834. https://doi.org/10.1104/pp.111.185033
Tian, F., Bradbury, P. J., Brown, P. J., Hung, H., Sun, Q., Flint-Garcia, S., … Buckler, E. S. (2011). Genome-wide association study of leaf architecture in the maize nested association mapping population. NATURE GENETICS, 43(2), 159–U113. https://doi.org/10.1038/ng.746
Kump, K. L., Bradbury, P. J., Wisser, R. J., Buckler, E. S., Belcher, A. R., Oropeza-Rosas, M. A., … Holland, J. B. (2011). Genome-wide association study of quantitative resistance to southern leaf blight in the maize nested association mapping population. NATURE GENETICS, 43(2), 163–U120. https://doi.org/10.1038/ng.747
Bloom, J. C., & Holland, J. B. (2011). Genomic localization of the maize cross-incompatibility gene, Gametophyte factor 1 (ga1). Maydica, 56(4), 379–387. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-84857675839&partnerID=MN8TOARS
Negeri, A. T., Coles, N. D., Holland, J. B., & Balint-Kurti, P. J. (2011). Mapping QTL controlling southern leaf blight resistance by joint analysis of three related recombinant inbred line populations. Crop Science, 51(4), 1571–1579. https://doi.org/10.2135/cropsci2010.12.0672
Wisser, R. J., Kolkman, J. M., Patzoldt, M. E., Holland, J. B., Yu, J., Krakowsky, M., … Balint-Kurti, P. J. (2011). Multivariate analysis of maize disease resistances suggests a pleiotropic genetic basis and implicates a GST gene. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 108(18), 7339–7344. https://doi.org/10.1073/pnas.1011739108
Holland, J. B., & Coles, N. D. (2011). QTL controlling masculinization of ear tips in a maize (Zea mays L.) intraspecific cross. G3: Genes, Genomes, Genetics, 1(5), 337–341. https://doi.org/10.1534/g3.111.000786
Avendano Lopez, A. N., Sanchez Gonzalez, J. de J., Ruiz Corral, J. A., De La Cruz Larios, L., Santacruz-Ruvalcaba, F., Sanchez Hernandez, C. V., & Holland, J. B. (2011). Seed Dormancy in Mexican Teosinte. CROP SCIENCE, 51(5), 2056–2066. https://doi.org/10.2135/cropsci2010.09.0538
Sanchez G, J. J., Cruz L, L. D., Vidal M, V. A., Ron P, J., Taba, S., Santacruz-Ruvalcaba, F., … Barba-Gonzalez, R. (2011). THREE NEW TEOSINTES (ZEA SPP., POACEAE) FROM MEXICO. AMERICAN JOURNAL OF BOTANY, 98(9), 1537–1548. https://doi.org/10.3732/ajb.1100193
Hung, H.-Y., Browne, C., Guill, K., Coles, N., Eller, M., Garcia, A., … Holland, J. B. (2012). The relationship between parental genetic or phenotypic divergence and progeny variation in the maize nested association mapping population. HEREDITY, 108(5), 490–499. https://doi.org/10.1038/hdy.2011.103
Holland, J. B., & Nelson, P. T. (2010). Dedication: Major M. Goodman: Maize Geneticist and Breeder. In Plant Breeding Reviews (Vol. 33, pp. 1–29). https://doi.org/10.1002/9780470535486.ch1
Glover, J. D., Reganold, J. P., Bell, L. W., Borevitz, J., Brummer, E. C., Buckler, E. S., … Xu, Y. (2010, June 25). Increased Food and Ecosystem Security via Perennial Grains. SCIENCE, Vol. 328, pp. 1638–1639. https://doi.org/10.1126/science.1188761
Glover, J. D., Reganold, J. P., Bell, L. W., Borevitz, J., Brummer, E. C., Buckler, E. S., … Xu, Y. (2010). Response. Science, 330(6000), 33–34. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-77957375418&partnerID=MN8TOARS
Eller, M. S., Payne, G. A., & Holland, J. B. (2010). Selection for Reduced Fusarium Ear Rot and Fumonisin Content in Advanced Backcross Maize Lines and Their Topeross Hybrids. CROP SCIENCE, 50(6), 2249–2260. https://doi.org/10.2135/cropsci2009.11.0683
Yan, W., & Holland, J. B. (2010). A heritability-adjusted GGE biplot for test environment evaluation. EUPHYTICA, 171(3), 355–369. https://doi.org/10.1007/s10681-009-0030-5
Gonzalo, M., Holland, J. B., Vyn, T. J., & McIntyre, L. M. (2010). Direct mapping of density response in a population of B73 x Mo17 recombinant inbred lines of maize (Zea Mays L.). HEREDITY, 104(6), 583–599. https://doi.org/10.1038/hdy.2009.140
Coles, N. D., McMullen, M. D., Balint-Kurti, P. J., Pratt, R. C., & Holland, J. B. (2010). Genetic Control of Photoperiod Sensitivity in Maize Revealed by Joint Multiple Population Analysis. GENETICS, 184(3), 799–U301. https://doi.org/10.1534/genetics.109.110304
McMullen, M. D., Kresovich, S., Villeda, H. S., Bradbury, P., Li, H., Sun, Q., … Buckler, E. S. (2009). Genetic properties of the maize nested association mapping population. Science, 325(5941), 737–740. https://doi.org/10.1126/science.1174320
Holland, J. B., & Cardinal, A. J. (2009). Harnessing quantitative genetics and genomics for understanding and improving complex traits in crops. In Drought Frontiers in Rice: Crop Improvement for Increased Rainfed Production (pp. 123–136). https://doi.org/10.1142/9789814280013_0008
Zwonitzer, J. C., Coles, N. D., Krakowsky, M. D., Arellano, C., Holland, J. B., McMullen, M. D., … Balint-Kurti, P. J. (2010). Mapping resistance quantitative trait loci for three foliar diseases in a maize recombinant inbred line population - Evidence for multiple disease resistance? Phytopathology, 100(1), 72–79. https://doi.org/10.1094/PHYTO-100-1-0072
Wooten, D. R., Livingston, D. P., III, Lyerly, H. J., Holland, J. B., Jellen, E. N., Marshall, D. S., & Murphy, J. P. (2009). Quantitative Trait Loci and Epistasis for Oat Winter-Hardiness Component Traits. CROP SCIENCE, 49(6), 1989–1998. https://doi.org/10.2135/cropsci2008.10.0612
Buckler, E. S., Holland, J. B., Bradbury, P. J., Acharya, C. B., Brown, P. J., Browne, C., … McMullen, M. D. (2009). The Genetic Architecture of Maize Flowering Time. SCIENCE, 325(5941), 714–718. https://doi.org/10.1126/science.1174276
Van Esbroeck, G. A., Corral, J. A. R., Gonzalez, J. J. S., & Holland, J. B. (2008). A Comparison of leaf appearance rates among teosinte, maize landraces and modern maize. Maydica, 53(2), 117–123.
Van Esbroeck, G. A., Ruiz Corral, J. A., Sanchez Gonzalez, J. J., & Holland, J. B. (2008). A comparison of leaf appearance rates among teosinte, maize landraces and modern maize. Maydica, 53(2), 117–123. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-57849127135&partnerID=MN8TOARS
Eller, M. S., Holland, J. B., & Payne, G. A. (2008). BREEDING FOR IMPROVED RESISTANCE TO FUMONISIN CONTAMINATION IN MAIZE. TOXIN REVIEWS, 27(3-4), 371–389. https://doi.org/10.1080/15569540802450326
Ruiz Corral, J. A., Puga, N. D., Sanchez Gonzalez, J. de J., Parra, J. R., Gonzalez Eguiarte, D. R., Holland, J. B., & Medina Garcia, G. (2008). Climatic adaptation and ecological descriptors of 42 Mexican maize races. CROP SCIENCE, 48(4), 1502–1512. https://doi.org/10.2135/cropsci2007.09.0518
Yu, J., Holland, J. B., McMullen, M. D., & Buckler, E. S. (2008). Genetic design and statistical power of nested association mapping in maize. GENETICS, 178(1), 539–551. https://doi.org/10.1534/genetics.107.074245
Eller, M. S., Robertson-Hoyt, L. A., Payne, G. A., & Holland, J. B. (2008). Grain yield and fusarium ear rot of maize hybrids developed from lines with varying levels of resistance. Maydica, 53(1-4), 231–237. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-77956931980&partnerID=MN8TOARS
Nelson, P. T., Coles, N. D., Holland, J. B., Bubeck, D. M., Smith, S., & Goodman, M. M. (2008). Molecular characterization of maize inbreds with expired US plant variety protection. CROP SCIENCE, 48(5), 1673–1685. https://doi.org/10.2135/cropsci2008.02.0092
Wooten, D. R., Livingston, D. P., III, Holland, J. B., Marshall, D. S., & Murphy, J. P. (2008). Quantitative trait loci and epistasis for crown freezing tolerance in the 'Kanota' x 'Ogle' hexaploid oat mapping population. CROP SCIENCE, 48(1), 149–157. https://doi.org/10.2135/cropsci2006.12.0793
Holland, J. B. (2007). [Review of Genetic architecture of complex traits in plants]. CURRENT OPINION IN PLANT BIOLOGY, 10(2), 156–161. https://doi.org/10.1016/j.pbi.2007.01.003
Krakowsky, M. D., Lee, M., & Holland, J. B. (2007). Genotypic correlation and multivariate QTL analyses for cell wall components and resistance to stalk tunneling by the European corn borer in maize. CROP SCIENCE, 47(2), 485–490. https://doi.org/10.2135/cropsci2006.05.0283
Burke, I. C., Holland, J. B., Burton, J. D., York, A. C., & Wilcut, J. W. (2007). Johnsongrass (Sorghum halepense) pollen expresses ACCase target-site resistance. WEED TECHNOLOGY, 21(2), 384–388. https://doi.org/10.1614/WT-06-061.1
Gonzalo, M., Vyn, T. J., Holland, J. B., & McIntyre, L. M. (2007). Mapping reciprocal effects and interactions with plant density stress in Zea mays L. HEREDITY, 99(1), 14–30. https://doi.org/10.1038/sj.hdy.6800955
Balint-Kurti, P. J., Zwonitzer, J. C., Wisser, R. J., Carson, M. L., Oropeza-Rosas, M. A., Holland, J. B., & Szalma, S. J. (2007). Precise mapping of quantitative trait loci for resistance to southern leaf blight, caused by Cochliobolus heterostrophus race O, and flowering time using advanced intercross maize lines. GENETICS, 176(1), 645–657. https://doi.org/10.1534/genetics.106.067892
Szalma, S. J., Hostert, B. M., LeDeaux, J. R., Stuber, C. W., & Holland, J. B. (2007). QTL mapping with near-isogenic lines in maize. THEORETICAL AND APPLIED GENETICS, 114(7), 1211–1228. https://doi.org/10.1007/s00122-007-0512-6
Robertson-Hoyt, L. A., Betran, J., Payne, G. A., White, D. G., Isakeit, T., Maragos, C. M., … Holland, J. B. (2007). Relationships among resistances to Fusarium and Aspergillus ear rots and contamination by fumonisin and aflatoxin in maize. PHYTOPATHOLOGY, 97(3), 311–317. https://doi.org/10.1094/PHYTO-97-3-0311
Robertson-Hoyt, L. A., Kleinschmidt, C. E., White, D. G., Payne, G. A., Maragos, C. M., & Holland, J. B. (2007). Relationships of resistance to Fusarium ear rot and fumonisin contamination with agronomic performance of maize. CROP SCIENCE, 47(5), 1770–1778. https://doi.org/10.2135/cropsci2006.10.0676
Robertson, L. A., Kleinschmidt, C. E., White, D. G., Payne, G. A., Maragos, C. M., & Holland, J. B. (2006). Erratum: Heritabilities and correlations of fusarium ear rot resistance and fumonisin contamination resistance in two maize populations (Crop Science 46, 1 (353-361)). Crop Science, 46(3). https://doi.org/10.2135/cropsci2005.0139er
Holland, J. B. (2006). Estimating genotypic correlations and their standard errors using multivariate restricted maximum likelihood estimation with SAS Proc MIXED. CROP SCIENCE, 46(2), 642–654. https://doi.org/10.2135/cropsci2005.0191
Tarter, J. A., & Holland, J. B. (2006). Gains from selection during the development of semiexotic inbred lines from Latin American maize accessions. Maydica, 51(1), 15–23. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-33646828357&partnerID=MN8TOARS
Robertson, L. A., Kleinschmidt, C. E., White, D. G., Payne, G. A., Maragos, C. M., & Holland, J. B. (2006). Heritabilities and correlations of fusarium ear rot resistance and fumonisin contamination resistance in two maize populations. CROP SCIENCE, 46(1), 353–361. https://doi.org/10.2135/cropsci2005.0139
Balint-Kurti, P. J., Krakowsky, M. D., Jines, M. P., Robertson, L. A., Molnar, T. L., Goodman, M. M., & Holland, J. B. (2006). Identification of quantitative trait loci for resistance to southern leaf blight and days to anthesis in a maize recombinant inbred line population. PHYTOPATHOLOGY, 96(10), 1067–1071. https://doi.org/10.1094/PHYTO-96-1067
Gonzalo, M., Vyn, T. J., Holland, J. B., & McIntyre, L. M. (2006). Mapping density response in maize: A direct approach for testing genotype and treatment interactions. GENETICS, 173(1), 331–348. https://doi.org/10.1534/genetics.105.045757
Jines, M. P., Balint-Kurti, P., Robertson-Hoyt, L. A., Molnar, T., Holland, J. B., & Goodman, M. M. (2007). Mapping resistance to Southern rust in a tropical by temperate maize recombinant inbred topcross population. THEORETICAL AND APPLIED GENETICS, 114(4), 659–667. https://doi.org/10.1007/s00122-006-0466-0
Zhao, W., Canaran, P., Jurkuta, R., Fulton, T., Glaubitz, J., Buckler, E., … Ware, D. (2006). Panzea: a database and resource for molecular and functional diversity in the maize genome. Nucleic Acids Research., 34(Database issue). Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-33644874840&partnerID=MN8TOARS
Robertson-Hoyt, L. A., Jines, M. P., Balint-Kurti, P. J., Kleinschmidt, C. E., White, D. G., Payne, G. A., … Holland, J. B. (2006). QTL mapping for fusarium ear rot and fumonisin contamination resistance in two maize populations. Crop Science, 46(4), 1734–1743. https://doi.org/10.2135/cropsci2005.12-0450
Long, J., Holland, J. B., Munkvold, G. P., & Jannink, J. L. (2006). Responses to selection for partial resistance to crown rust in oat. CROP SCIENCE, 46(3), 1260–1265. https://doi.org/10.2135/cropsci2005.06-0169
Holland, J. B. (2008). Theoretical and Biological Foundations of Plant Breeding. In Plant Breeding: The Arnel R. Hallauer International Symposium (pp. 127–140). https://doi.org/10.1002/9780470752708.ch9
Yu, J., Pressoir, G., Briggs, W. H., Vroh Bi, I., Yamasaki, M., Doebley, J. F., … Buckler, E. S. (2006). A unified mixed-model method for association mapping that accounts for multiple levels of relatedness. Nature Genetics, 38(2), 203–208. https://doi.org/10.1038/ng1702
Tarter, J. A., Goodman, M. M., & Holland, J. B. (2004). Recovery of exotic alleles in semiexotic maize inbreds derived from crosses between Latin American accessions and a temperate line. Theoretical and Applied Genetics, 109(3), 609–617. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-4344701300&partnerID=MN8TOARS
Holland, J. B., & Goodman, M. M. (2003). Combining ability of a tropical-derived maize population with isogenic BT and conventional testers. Maydica, 48(1), 1–8. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0038419797&partnerID=MN8TOARS
Helland, S. J., & Holland, J. B. (2003). Genome-wide genetic diversity among components does not cause cultivar blend responses. Crop Science, 43(5), 1618–1627. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0141459295&partnerID=MN8TOARS
Tarter, J. A., Goodman, M. M., & Holland, J. B. (2003). Testcross Performance of Semiexotic Inbred Lines Derived from Latin American Maize Accessions. Crop Science, 43(6), 2272–2278. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0242653940&partnerID=MN8TOARS
Cox, T. S., Bender, M., Picone, C., Van Tassel, D. L., Holland, J. B., Brummer, E. C., … Jackson, W. (2002). Breeding perennial grain crops. Critical Reviews in Plant Sciences, 21(2), 59–91. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0036216289&partnerID=MN8TOARS
Cervantes-Martinez, C. T., Frey, K. J., White, P. J., Wesenberg, D. M., & Holland, J. B. (2002). Correlated responses to selection for greater β-glucan content in two oat populations. Crop Science, 42(3), 730–738. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0036235335&partnerID=MN8TOARS
Holland, J. B., Portyanko, V. A., Hoffman, D. L., & Lee, M. (2002). Genomic regions controlling vernalization and photoperiod responses in oat. THEORETICAL AND APPLIED GENETICS, 105(1), 113–126. https://doi.org/10.1007/s00122-001-0845-5
Portyanko, V. A., Hoffman, D. L., Lee, M., & Holland, J. B. (2001). A linkage map of hexaploid oat based on grass anchor DNA clones and its relationship to other oat maps. GENOME, 44(2), 249–265. https://doi.org/10.1139/gen-44-2-249
Kremer, C. A., Lee, M., & Holland, J. B. (2001). A restriction fragment length polymorphism based linkage map of a diploid Avena recombinant inbred line population. Genome, 44(2), 192–204. https://doi.org/10.1139/gen-44-2-192
Helland, S. J., & Holland, J. B. (2001). Blend response and stability and cultivar blending ability in oat. Crop Science, 41(6), 1689–1696. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0035656793&partnerID=MN8TOARS
Holland, J. B., Frey, K. J., & Hammond, E. G. (2001). Correlated responses of fatty acid composition, grain quality, and agronomic traits to nine cycles of recurrent selection for increased oil content in oat. EUPHYTICA, 122(1), 69–79. https://doi.org/10.1023/A:1012639821332
Holland, J. B., & Munkvold, G. P. (2001). Genetic relationships of crown rust resistance, grain yield, test weight, and seed weight in oat. Crop Science, 41(4), 1041–1050. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0034891094&partnerID=MN8TOARS
Holland, J. B., Helland, S. J., Sharopova, N., & Rhyne, D. C. (2001). Polymorphism of PCR-based markers targeting exons, introns, promoter regions, and SSRs in maize and introns and repeat sequences in oat. GENOME, 44(6), 1065–1076. https://doi.org/10.1139/gen-44-6-1065
Holland, J. B., Helland, S. J., Sharopova, N., & Rhyne, D. C. (2001). Polymorphism of PCR-based markers targeting exons, introns, promoter regions, and SSRs in maize and introns and repeat sequences in oat. Genome, 44(6), 1065–1076. https://doi.org/10.1139/g01-110
Cervantes-Martinez, C. T., Frey, K. J., White, P. J., Wesenberg, D. M., & Holland, J. B. (2001). Selection for greater β-glucan content in oat grain. Crop Science, 41(4), 1085–1091. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0034890343&partnerID=MN8TOARS
Holland, J. B., Bjornstad, A., Frey, K. J., Gullord, M., Wesenberg, D. M., & Buraas, T. (2000). Recurrent selection in oat for adaptation to diverse environments. EUPHYTICA, 113(3), 195–205. https://doi.org/10.1023/A:1003933421378
Holland, J. B., & Brummer, E. C. (1999). Cultivar effects on oat-berseem clover intercrops. Agronomy Journal, 91(2), 321–329. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0032772190&partnerID=MN8TOARS
Hoi, S. W., Holland, J. B., & Hammond, E. G. (1999). Heritability of lipase activity of oat caryopses. Crop Science, 39(4), 1055–1059. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0032770550&partnerID=MN8TOARS
Frey, K. J., & Holland, J. B. (1999). Nine cycles of recurrent selection for increased groat-oil content in oat. Crop Science, 39(6), 1636–1641. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0033374759&partnerID=MN8TOARS
Holland, J. B. (1998). EPISTACY: A SAS program for detecting two-locus epistatic interactions using genetic marker information. Journal of Heredity, 89(4), 374–375. https://doi.org/10.1093/jhered/89.4.374
Holland, J. B., Uhr, D. V., Jeffers, D., & Goodman, M. M. (1998). Inheritance of resistance to southern corn rust in tropical by corn-belt maize populations. THEORETICAL AND APPLIED GENETICS, 96(2), 232–241. https://doi.org/10.1007/s001220050732
Palmer, R. G., Holland, J. B., & Lewers, K. S. (1998). Recombination values for the Ms6-W1 chromosome region in different genetic backgrounds in soybean. Crop Science, 38(2), 293–296. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0031811862&partnerID=MN8TOARS
QTLs and epistasis associated with vernalization responses in oat. (1997). Crop Science, 37(4), 1306–1316. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0030822104&partnerID=MN8TOARS
Holland, J. B., Goodman, M. M., & Castillo-Gonzalez, F. (1996). Identification of agronomically superior Latin American maize accessions via multi-stage evaluations. Crop Science, 36(3), 778–784. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0029832942&partnerID=MN8TOARS
Holthaus, J. F., Holland, J. B., White, P. J., & Frey, K. J. (1996). Inheritance of β-glucan content of oat grain. Crop Science, 36(3), 567–572. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0029789190&partnerID=MN8TOARS
Holland, J. B., & Goodman, M. M. (1995). Combining ability of tropical maize accessions with U.S. germplasm. Crop Science, 35(3), 767–773. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0029165570&partnerID=MN8TOARS
Holland, J. B., & Bingham, E. T. (1994). Genetic improvement for yield and fertility of alfalfa cultivars representing different eras of breeding. Crop Science, 34(4), 953–957. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0027995637&partnerID=MN8TOARS