Works (30)

Updated: July 5th, 2023 15:34

2023 article

Analysis of alkaloids and reducing sugars in processed and unprocessed tobacco leaves using a handheld near infrared spectrometer

Castillo, M. S., Acosta, J. J., Hodge, G. R., Vann, M. C., & Lewis, R. S. (2023, January 16). JOURNAL OF NEAR INFRARED SPECTROSCOPY, Vol. 1.

co-author countries: United States of America 🇺🇸
author keywords: Near infrared spectroscopy; handheld; alkaloids; tobacco; reducing sugars; unprocessed; intact
Sources: Web Of Science, ORCID
Added: February 13, 2023

2023 journal article

Quantitative Genetics of a Hybrid Population of Eucalyptus nitens x Eucalyptus globulus: Estimation of Genetic Parameters and Implications for Breeding Strategies

FORESTS, 14(2).

co-author countries: Chile 🇨🇱 United States of America 🇺🇸
author keywords: genetics parameters; F-1 hybrids; Eucalyptus; General Hybridizing Ability (GHA); tree breeding; wood traits
Sources: ORCID, Web Of Science
Added: February 15, 2023

2022 article

Genomic consequences of artificial selection during early domestication of a wood fibre crop

Mostert-O'Neill, M. M., Tate, H., Reynolds, S. M., Mphahlele, M. M., Berg, G., Verryn, S. D., … Myburg, A. A. (2022, July 2). NEW PHYTOLOGIST, Vol. 7.

co-author countries: Australia 🇦🇺 United States of America 🇺🇸 South Africa 🇿🇦
author keywords: artificial selection; domestication; eucalypt; forestry; population genomics; selection signatures
MeSH headings : Domestication; Genome, Plant; Genomics; Plant Breeding; Polymorphism, Single Nucleotide / genetics; Selection, Genetic; Wood / genetics
Sources: ORCID, Web Of Science
Added: July 3, 2022

2022 journal article

Predicted genetic gains for growth traits and wood resistance in Pinus maximinoi and Pinus tecunumanii

CROP BREEDING AND APPLIED BIOTECHNOLOGY, 22(2).

co-author countries: Brazil 🇧🇷 United States of America 🇺🇸
author keywords: Genetic parameters; Seed orchard; Heritability; Resistograph; Selection index
Sources: ORCID, Web Of Science
Added: August 6, 2022

2022 journal article

Quantitative trait loci related to growth and wood quality traits in Eucalyptus grandis W. Hill identified through single- and multi-trait genome-wide association studies

TREE GENETICS & GENOMES, 18(6).

By: L. Rocha*, T. Benatti*, L. Siqueira*, I. Souza*, I. Bianchin*, A. Souza*, A. Miranda Fernandes*, S. Oda* ...

co-author countries: Brazil 🇧🇷 Spain 🇪🇸 United States of America 🇺🇸
author keywords: Association mapping; Genome-wide association study; Eucalyptus; Gene ontology
Sources: Web Of Science, ORCID
Added: October 24, 2022

2022 journal article

Towards Inline Prediction of Color Development for Wood Stained with Chemical Stains Using Near-Infrared Spectroscopy

FOREST PRODUCTS JOURNAL, 72(2), 130–139.

By: M. Kropat*, P. Laleicke & J. Acosta

Sources: Web Of Science, ORCID
Added: August 1, 2022

2021 journal article

A genome‐wide SNP genotyping resource for tropical pine tree species

Molecular Ecology Resources, 22(2), 695–710.

By: C. Jackson n, N. Christie*, S. Reynolds*, G. Marais*, Y. Tii‐kuzu*, M. Caballero*, T. Kampman*, E. Visser* ...

co-author countries: United States of America 🇺🇸 South Africa 🇿🇦
author keywords: genotyping array; molecular breeding; Pitro50K; SNP; tropical pines
Sources: Web Of Science, ORCID, Crossref
Added: September 7, 2021

2021 journal article

Genomic evidence of introgression and adaptation in a model subtropical tree species,Eucalyptus grandis

MOLECULAR ECOLOGY, 30(3), 625–638.

co-author countries: Australia 🇦🇺 United States of America 🇺🇸 South Africa 🇿🇦
author keywords: ancestry mapping; environmental association; introgression; population genomics
MeSH headings : Acclimatization; Adaptation, Physiological / genetics; Eucalyptus / genetics; Genomics; Trees / genetics
Sources: Web Of Science, ORCID
Added: September 28, 2020

2021 journal article

HYPERSPECTRAL IMAGING WITH COST-SENSITIVE LEARNING FOR HIGH-THROUGHPUT SCREENING OF LOBLOLLY PINE (PINUS TAEDA L.) SEEDLINGS FOR FREEZE TOLERANCE

TRANSACTIONS OF THE ASABE, 64(6), 2045–2059.

By: Y. Lu*, K. Payn*, P. Pandey*, J. Acosta, A. Heine*, T. Walker*, S. Young*

author keywords: Cost-sensitive learning; Freeze tolerance; Hyperspectral imaging; Plant phenotyping; Support vector machine
Sources: Web Of Science, ORCID
Added: January 7, 2022

2021 journal article

Hyperspectral Imaging Combined with Machine Learning for the Detection of Fusiform Rust Disease Incidence in Loblolly Pine Seedlings

REMOTE SENSING, 13(18).

co-author countries: United States of America 🇺🇸
author keywords: plant imaging; computer vision; forestry; disease discrimination; hyperspectral imaging; plant phenotyping; machine learning
Sources: ORCID, Web Of Science
Added: September 11, 2021

2021 article

Initial growth results comparing first generation F1 and advanced-generation F2 Pinus patula x Pinus tecunumanii interspecific hybrid families

Nel, A., Acosta, J. J., & Hodge, G. R. (2021, September 28). SOUTHERN FORESTS-A JOURNAL OF FOREST SCIENCE, Vol. 9.

By: A. Nel, J. Acosta n & G. Hodge n

co-author countries: United States of America 🇺🇸
author keywords: F1 versus F2 hybrids; F2 hybrids; PPTL; seed yields; synthetic hybrids
Sources: ORCID, Web Of Science
Added: September 28, 2021

2021 journal article

Prediction of Freeze Damage and Minimum Winter Temperature of the Seed Source of Loblolly Pine Seedlings Using Hyperspectral Imaging

FOREST SCIENCE, 67(3), 321–334.

By: Y. Lu*, T. Walker n, J. Acosta n, S. Young n, P. Pandey n, A. Heine n, K. Payn n

co-author countries: United States of America 🇺🇸
author keywords: loblolly pine; freeze damage; hyperspectral imaging; predictive modeling; variable selection
Sources: ORCID, Web Of Science
Added: April 7, 2021

2021 article

The use of near infrared spectroscopy to predict foliar nutrient levels of hydroponically grown teak seedlings

Whittier, W. A., Hodge, G. R., Lopez, J., Saravitz, C., & Acosta, J. J. (2021, July 8). JOURNAL OF NEAR INFRARED SPECTROSCOPY, Vol. 7.

co-author countries: United States of America 🇺🇸
author keywords: Tectona grandis; teak; near infrared spectroscopy; foliar nutrient; nitrogen; phosphorus; potassium
Sources: Web Of Science, ORCID
Added: July 26, 2021

2021 journal article

Toward genomic selection in Pinus taeda: Integrating resources to support array design in a complex conifer genome

APPLICATIONS IN PLANT SCIENCES, 9(6).

By: M. Caballero*, E. Lauer n, J. Bennett*, S. Zaman*, S. McEvoy*, J. Acosta n, C. Jackson n, L. Townsend n ...

co-author countries: United States of America 🇺🇸
author keywords: exome capture; genomic selection; genotype array; genotyping-by-sequencing (GBS); loblolly pine; Pinus taeda; variant detection
Sources: ORCID, Web Of Science
Added: July 4, 2021

2020 journal article

An Algorithm for Genetic Analysis of Full-Sib Datasets with Mixed-Model Software Lacking a Numerator Relationship Matrix Function, and a Comparison with Results from a Dedicated Genetic Software Package

Forests, 11(11), 1169.

co-author countries: United States of America 🇺🇸
author keywords: diallel; variance components; breeding values; REML; BLUP; pedigree; heritability
Source: ORCID
Added: November 3, 2020

2020 journal article

Comparison of benchtop and handheld near-infrared spectroscopy devices to determine forage nutritive value

CROP SCIENCE, 60(6), 3410–3422.

co-author countries: United States of America 🇺🇸
Sources: ORCID, Web Of Science
Added: August 12, 2020

2020 journal article

Defoliation management effects on nutritive value of ‘performer’ switchgrass

Crop Science, 60(3), 1682–1689.

By: P. Bekewe n, M. Castillo n, J. Acosta n & R. Rivera n

co-author countries: United States of America 🇺🇸

Contributors: P. Bekewe n, M. Castillo n, J. Acosta n & R. Rivera n

Sources: Crossref, ORCID
Added: June 11, 2020

2020 journal article

Genomics of Clinal Local Adaptation in Pinus sylvestris Under Continuous Environmental and Spatial Genetic Setting

G3&Amp;#58; Genes|Genomes|Genetics, 10(8), 2683–2696.

co-author countries: Belgium 🇧🇪 Spain 🇪🇸 Finland 🇫🇮 United States of America 🇺🇸
author keywords: adaptation; population genetics - empirical; landscape genetics; gymnosperms; Pinus sylvestris; Local adaptation; Targeted DNA Sequencing; Structural Variation
MeSH headings : Adaptation, Physiological / genetics; Ecosystem; Genetic Variation; Genetics, Population; Genomics; Pinus; Pinus sylvestris / genetics; Selection, Genetic
Source: ORCID
Added: August 12, 2020

2020 journal article

Wood and Pulping Properties Variation of Acacia crassicarpa A.Cunn. ex Benth. and Sampling Strategies for Accurate Phenotyping

Forests, 11(10), 1043.

By: G. Martins n, M. Yuliarto, R. Antes, Sabki, A. Prasetyo, F. Unda*, S. Mansfield*, G. Hodge n, J. Acosta n

co-author countries: Canada 🇨🇦 United States of America 🇺🇸
author keywords: Acacia crassicarpa; phenotypic variation; wood and pulping properties; longitudinal variation; wood chemistry; basic density; NIRS
Source: ORCID
Added: September 29, 2020

2019 journal article

Exome Resequencing Reveals Evolutionary History, Genomic Diversity, and Targets of Selection in the Conifers Pinus taeda and Pinus elliottii

Genome Biology and Evolution, 11(2), 508–520.

By: J. Acosta n, A. Fahrenkrog*, L. Neves*, M. Resende*, C. Dervinis*, J. Davis*, J. Holliday*, M. Kirst*

co-author countries: United States of America 🇺🇸

Contributors: J. Acosta n, A. Fahrenkrog*, L. Neves*, M. Resende*, C. Dervinis*, J. Davis*, J. Holliday*, M. Kirst*

Ed(s): E. Pritham

author keywords: Pinus taeda; Pinus elliottii; demography; genetic diversity; natural selection; exome
MeSH headings : Biological Evolution; Computer Simulation; Genetic Variation; Linkage Disequilibrium; Ovule / chemistry; Pinus taeda / genetics; Population Dynamics; Selection, Genetic
Sources: Web Of Science, Crossref, ORCID
Added: June 17, 2019

2018 journal article

Genomic selection prediction models comparing sequence capture and SNP array genotyping methods

Molecular Breeding, 38(9).

By: B. de Moraes*, R. dos Santos*, B. de Lima, A. Aguiar, A. Missiaggia, D. da Costa Dias, G. Rezende, F. Gonçalves* ...

co-author countries: Brazil 🇧🇷 United States of America 🇺🇸

Contributors: B. Moraes*, R. Santos*, B. Lima, A. Aguiar, A. Missiaggia, D. Costa Dias, G. Rezende, F. Gonçalves* ...

author keywords: Captured sequences; Exome capture; Prediction ability; Sequencing; Genotyping platforms; Eucalyptus
Sources: Web Of Science, Crossref, ORCID
Added: October 19, 2018

2018 journal article

Global near infrared spectroscopy models to predict wood chemical properties of Eucalyptus

Journal of Near Infrared Spectroscopy, 26(2), 117–132.

By: G. Hodge n, J. Acosta n, F. Unda*, W. Woodbridge n & S. Mansfield*

co-author countries: Canada 🇨🇦 United States of America 🇺🇸

Contributors: G. Hodge n, J. Acosta n, F. Unda*, W. Woodbridge n & S. Mansfield*

author keywords: Near infrared; global calibrations; lignin; S/G ratio; glucose; xylose; breeding; indirect selection; wood quality; Eucalyptus
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

2018 journal article

Terpenes associated with resistance against the gall wasp, Leptocybe invasa, in Eucalyptus grandis

Plant, Cell & Environment, 41(8), 1840–1851.

co-author countries: Australia 🇦🇺 United States of America 🇺🇸 South Africa 🇿🇦
author keywords: attractant; GC-MS; NIR; plant defence; repellent
MeSH headings : Animals; Disease Resistance; Eucalyptus / immunology; Eucalyptus / metabolism; Eucalyptus / parasitology; Plant Leaves / parasitology; Plant Shoots / parasitology; Plant Tumors / parasitology; Spectroscopy, Near-Infrared; Terpenes / metabolism; Wasps
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

2013 journal article

The Amborella Genome and the Evolution of Flowering Plants

Science, 342(6165), 1456–1457.

By: V. Albert, W. Barbazuk, C. dePamphilis, J. Der, J. Leebens-Mack, H. Ma, J. Palmer, S. Rounsley ...

Contributors: C. DePamphilis, J. Palmer, S. Rounsley, D. Sankoff, S. Schuster, J. Ammiraju, W. Barbazuk, S. Chamala ...

MeSH headings : Conservation of Natural Resources; Contig Mapping; Evolution, Molecular; Flowers / genetics; Gene Duplication; Genetic Variation; Genome, Plant; Metagenomics / statistics & numerical data; Molecular Sequence Annotation; Multigene Family; New Caledonia; Phylogeny; Sequence Analysis, DNA; Tracheophyta / classification; Tracheophyta / genetics; Tracheophyta / growth & development
Sources: ORCID, Web Of Science
Added: August 6, 2018

2011 journal article

Accelerating the domestication of trees using genomic selection: accuracy of prediction models across ages and environments

New Phytologist, 193(3), 617–624.

By: M. Resende*, P. Muñoz*, J. Acosta*, G. Peter*, J. Davis*, D. Grattapaglia*, M. Resende*, M. Kirst*

co-author countries: Brazil 🇧🇷 United States of America 🇺🇸

Contributors: M. Resende*, P. Muñoz*, J. Acosta*, G. Peter*, J. Davis*, D. Grattapaglia*, M. Resende*, M. Kirst*

author keywords: genomic selection; genotype by environment interaction; model estimation; Pinus taeda; plant breeding
MeSH headings : Agriculture; Environment; Genomics / methods; Inheritance Patterns / genetics; Linear Models; Models, Genetic; Phenotype; Pinus / anatomy & histology; Pinus / genetics; Pinus / growth & development; Quantitative Trait, Heritable; Reproducibility of Results; Selection, Genetic; Time Factors; Trees / genetics; Trees / growth & development
Sources: ORCID, Crossref
Added: July 2, 2020

2011 journal article

Stability of Genomic Selection prediction models across ages and environments

BMC Proceedings.

Source: ORCID
Added: June 25, 2020

2006 journal article

Evaluación de métodos estadísticos utilizados en trabajos de grado y tesis en los programas de la facultad de ciencias agropecuarias, en un período de tres años

Revista Facultad Nacional De Agronomía, 59(2), 3565–3580. https://www.redalyc.org/articulo.oa?id=179914075012

By: H. Echavarría, G. Correa, J. Patiño, J. Acosta & J. Rueda

Source: NC State University Libraries
Added: September 27, 2020

2006 journal article

Evaluación de métodos estadísticos utilizados en trabajos de grado y tesis en los programas de la facultad de ciencias agropecuarias, en un período de tres años.

Revista Facultad Nacional De Agronomía, Medellín., 59(2), 3465–3580. https://revistas.unal.edu.co/index.php/refame/article/view/24349

By: H. Echavarría Sánchez, G. Correa Londoño, J. Patiño Díez, J. Acosta Jaramillo & J. Rueda Restrepo

Source: ORCID
Added: July 2, 2020

2005 journal article

Escorrentía superficial en bosques montanos naturales y plantados de Antioquia, Colombia

Revista Facultad Nacional De Agronomía, Medellín., S.l.], v. 58, n. 1, 2635–2649, https://revistas.unal.edu.co/index.php/refame/article/view/21509/22498

By: O. Ruiz Suescún

Source: ORCID
Added: July 2, 2020

2005 journal article

Escorrentía superficial en bosques montanos naturales y plantados de Antioquia, Colombia

Revista Facultad Nacional De Agronomía, 58(1), 2635–2649. http://www.bdigital.unal.edu.co/24359/1/21509-73485-1-PB.pdf

By: O. Ruiz, J. Acosta & J. León

Source: NC State University Libraries
Added: September 27, 2020

Employment

Updated: April 4th, 2023 11:33

2022 - present

North Carolina State University Raleigh, North Carolina, US
Associate Director - Associate Research Professor Camcore, Department of Forestry & Environmental Resources

2014 - 2022

North Carolina State University Raleigh, North Carolina, US
Research Assistant Professor - Genetics and Tree Improvement Camcore, Department of Forestry & Environmental Resources

2009 - 2014

University of Florida Gainesville, FL, US
Graduate Research Assistant School of Forest Resources and Conservation

2004 - 2009

Smurfit Kappa Colombia Yumbo, CO
Forest Research Engineer - Tree Improvement Program Research and Development

2006 - 2008

Smurfit Kappa Colombia Yumbo, CO
Forest Research Engineer – Seed Orchards Research and Development

Education

Updated: June 26th, 2020 07:58

2009 - 2014

University of Florida Gainesville, FL, US
Ph.D. - Forest Genetics, Minor: Statistics Forest Resources and Conservation

1998 - 2004

Universidad Nacional de Colombia Medellin, CO
B.Sc - Forest Engineering Departamento de Ciencias Forestales