@article{castillo_acosta_hodge_vann_lewis_2023, title={Analysis of alkaloids and reducing sugars in processed and unprocessed tobacco leaves using a handheld near infrared spectrometer}, volume={1}, ISSN={["1751-6552"]}, DOI={10.1177/09670335221148594}, journal={JOURNAL OF NEAR INFRARED SPECTROSCOPY}, author={Castillo, Miguel S. and Acosta, Juan J. and Hodge, Gary R. and Vann, Matthew C. and Lewis, Ramsey S.}, year={2023}, month={Jan} } @article{ibarra_hodge_acosta_2023, title={Quantitative Genetics of a Hybrid Population of Eucalyptus nitens x Eucalyptus globulus: Estimation of Genetic Parameters and Implications for Breeding Strategies}, volume={14}, ISSN={["1999-4907"]}, url={https://doi.org/10.3390/f14020381}, DOI={10.3390/f14020381}, number={2}, journal={FORESTS}, author={Ibarra, Luis and Hodge, Gary and Acosta, Juan Jose}, year={2023}, month={Feb} } @article{mostert-o'neill_tate_reynolds_mphahlele_berg_verryn_acosta_borevitz_myburg_2022, title={Genomic consequences of artificial selection during early domestication of a wood fibre crop}, volume={7}, ISSN={["1469-8137"]}, url={https://doi.org/10.1111/nph.18297}, DOI={10.1111/nph.18297}, journal={NEW PHYTOLOGIST}, author={Mostert-O'Neill, Marja M. and Tate, Hannah and Reynolds, S. Melissa and Mphahlele, Makobatjatji M. and Berg, Gert and Verryn, Steve D. and Acosta, Juan J. and Borevitz, Justin O. and Myburg, Alexander A.}, year={2022}, month={Jul} } @article{perek_hodge_tambarussi_biernaski_acosta_2022, title={Predicted genetic gains for growth traits and wood resistance in Pinus maximinoi and Pinus tecunumanii}, volume={22}, ISSN={["1984-7033"]}, url={https://doi.org/10.1590/1984-70332022v22n2a23}, DOI={10.1590/1984-70332022v22n2a23}, number={2}, journal={CROP BREEDING AND APPLIED BIOTECHNOLOGY}, author={Perek, Matheus and Hodge, Gary and Tambarussi, Evandro Vagner and Biernaski, Fabricio Antonio and Acosta, Juan}, year={2022} } @article{rocha_benatti_siqueira_souza_bianchin_souza_miranda fernandes_oda_stape_yassue_et al._2022, title={Quantitative trait loci related to growth and wood quality traits in Eucalyptus grandis W. Hill identified through single- and multi-trait genome-wide association studies}, volume={18}, ISSN={["1614-2950"]}, DOI={10.1007/s11295-022-01570-x}, number={6}, journal={TREE GENETICS & GENOMES}, author={Rocha, Lucas Fernandes and Benatti, Thiago Romanos and Siqueira, Leandro and Souza, Izabel Christina and Bianchin, Isadora and Souza, Aguinaldo Jose and Miranda Fernandes, Aline Cristina and Oda, Shinitiro and Stape, Jose Luiz and Yassue, Rafael Massahiro and et al.}, year={2022}, month={Dec} } @article{kropat_laleicke_acosta_2022, title={Towards Inline Prediction of Color Development for Wood Stained with Chemical Stains Using Near-Infrared Spectroscopy}, volume={72}, ISSN={["0015-7473"]}, DOI={10.13073/FPJ-D-22-00021}, number={2}, journal={FOREST PRODUCTS JOURNAL}, author={Kropat, Marcel and Laleicke, Paul Frederik and Acosta, Juan Jose}, year={2022}, pages={130–139} } @article{jackson_christie_reynolds_marais_tii-kuzu_caballero_kampman_visser_naidoo_kain_et al._2021, title={A genome-wide SNP genotyping resource for tropical pine tree species}, volume={8}, ISSN={["1755-0998"]}, DOI={10.1111/1755-0998.13484}, journal={MOLECULAR ECOLOGY RESOURCES}, author={Jackson, Colin and Christie, Nanette and Reynolds, Sharon Melissa and Marais, Gerhard C. and Tii-kuzu, Yokateme and Caballero, Madison and Kampman, Tamanique and Visser, Erik A. and Naidoo, Sanushka and Kain, Dominic and et al.}, year={2021}, month={Aug} } @article{mostert-o'neill_reynolds_acosta_lee_borevitz_myburg_2021, title={Genomic evidence of introgression and adaptation in a model subtropical tree species,Eucalyptus grandis}, volume={30}, ISSN={["1365-294X"]}, url={http://dx.doi.org/10.1111/mec.15615}, DOI={10.1111/mec.15615}, number={3}, journal={MOLECULAR ECOLOGY}, publisher={Wiley}, author={Mostert-O'Neill, Marja Mirjam and Reynolds, Sharon Melissa and Acosta, Juan Jose and Lee, David John and Borevitz, Justin O. and Myburg, Alexander Andrew}, year={2021}, month={Feb}, pages={625–638} } @article{lu_payn_pandey_acosta_heine_walker_young_2021, title={HYPERSPECTRAL IMAGING WITH COST-SENSITIVE LEARNING FOR HIGH-THROUGHPUT SCREENING OF LOBLOLLY PINE (PINUS TAEDA L.) SEEDLINGS FOR FREEZE TOLERANCE}, volume={64}, ISSN={["2151-0040"]}, url={http://dx.doi.org/10.13031/trans.14708}, DOI={10.13031/trans.14708}, number={6}, journal={TRANSACTIONS OF THE ASABE}, publisher={American Society of Agricultural and Biological Engineers (ASABE)}, author={Lu, Yuzhen and Payn, Kitt G. and Pandey, Piyush and Acosta, Juan J. and Heine, Austin J. and Walker, Trevor D. and Young, Sierra}, year={2021}, pages={2045–2059} } @article{pandey_payn_lu_heine_walker_acosta_young_2021, title={Hyperspectral Imaging Combined with Machine Learning for the Detection of Fusiform Rust Disease Incidence in Loblolly Pine Seedlings}, volume={13}, ISSN={["2072-4292"]}, url={https://doi.org/10.3390/rs13183595}, DOI={10.3390/rs13183595}, number={18}, journal={REMOTE SENSING}, publisher={MDPI AG}, author={Pandey, Piyush and Payn, Kitt G. and Lu, Yuzhen and Heine, Austin J. and Walker, Trevor D. and Acosta, Juan J. and Young, Sierra}, year={2021}, month={Sep} } @article{nel_acosta_hodge_2021, title={Initial growth results comparing first generation F1 and advanced-generation F2 Pinus patula x Pinus tecunumanii interspecific hybrid families}, volume={9}, ISSN={["2070-2639"]}, url={https://doi.org/10.2989/20702620.2021.1926370}, DOI={10.2989/20702620.2021.1926370}, journal={SOUTHERN FORESTS-A JOURNAL OF FOREST SCIENCE}, publisher={National Inquiry Services Center (NISC)}, author={Nel, Andre and Acosta, Juan J. and Hodge, Gary R.}, year={2021}, month={Sep} } @article{lu_walker_acosta_young_pandey_heine_payn_2021, title={Prediction of Freeze Damage and Minimum Winter Temperature of the Seed Source of Loblolly Pine Seedlings Using Hyperspectral Imaging}, volume={67}, ISSN={["1938-3738"]}, url={https://doi.org/10.1093/forsci/fxab003}, DOI={10.1093/forsci/fxab003}, number={3}, journal={FOREST SCIENCE}, publisher={Oxford University Press (OUP)}, author={Lu, Yuzhen and Walker, Trevor D. and Acosta, Juan J. and Young, Sierra and Pandey, Piyush and Heine, Austin J. and Payn, Kitt G.}, year={2021}, month={Jun}, pages={321–334} } @article{whittier_hodge_lopez_saravitz_acosta_2021, title={The use of near infrared spectroscopy to predict foliar nutrient levels of hydroponically grown teak seedlings}, volume={7}, ISSN={["1751-6552"]}, DOI={10.1177/09670335211025649}, journal={JOURNAL OF NEAR INFRARED SPECTROSCOPY}, author={Whittier, William Andrew and Hodge, Gary R. and Lopez, Juan and Saravitz, Carole and Acosta, Juan Jose}, year={2021}, month={Jul} } @article{caballero_lauer_bennett_zaman_mcevoy_acosta_jackson_townsend_eckert_whetten_et al._2021, title={Toward genomic selection in Pinus taeda: Integrating resources to support array design in a complex conifer genome}, volume={9}, ISSN={["2168-0450"]}, url={https://doi.org/10.1002/aps3.11439}, DOI={10.1002/aps3.11439}, number={6}, journal={APPLICATIONS IN PLANT SCIENCES}, publisher={Wiley}, author={Caballero, Madison and Lauer, Edwin and Bennett, Jeremy and Zaman, Sumaira and McEvoy, Susan and Acosta, Juan and Jackson, Colin and Townsend, Laura and Eckert, Andrew and Whetten, Ross W. and et al.}, year={2021}, month={Jun} } @article{hodge_acosta_2020, title={An Algorithm for Genetic Analysis of Full-Sib Datasets with Mixed-Model Software Lacking a Numerator Relationship Matrix Function, and a Comparison with Results from a Dedicated Genetic Software Package}, volume={11}, url={https://doi.org/10.3390/f11111169}, DOI={10.3390/f11111169}, number={11}, journal={Forests}, publisher={MDPI AG}, author={Hodge, Gary R. and Acosta, Juan Jose}, year={2020}, month={Nov}, pages={1169} } @article{acosta_castillo_hodge_2020, title={Comparison of benchtop and handheld near-infrared spectroscopy devices to determine forage nutritive value}, volume={60}, ISSN={["1435-0653"]}, url={http://dx.doi.org/10.1002/csc2.20264}, DOI={10.1002/csc2.20264}, number={6}, journal={CROP SCIENCE}, publisher={Wiley}, author={Acosta, J. J. and Castillo, M. S. and Hodge, G. R.}, year={2020}, pages={3410–3422} } @article{bekewe_castillo_acosta_rivera_2020, title={Defoliation management effects on nutritive value of ‘performer’ switchgrass}, volume={60}, ISSN={0011-183X 1435-0653}, url={http://dx.doi.org/10.1002/csc2.20036}, DOI={10.1002/csc2.20036}, number={3}, journal={Crop Science}, publisher={Wiley}, author={Bekewe, Perejitei E. and Castillo, Miguel S. and Acosta, Juan J. and Rivera, R.}, year={2020}, month={Mar}, pages={1682–1689} } @article{tyrmi_vuosku_acosta_li_sterck_cervera_savolainen_pyhäjärvi_2020, title={Genomics of Clinal Local Adaptation in Pinus sylvestris Under Continuous Environmental and Spatial Genetic Setting}, volume={10}, url={https://doi.org/10.1534/g3.120.401285}, DOI={10.1534/g3.120.401285}, number={8}, journal={G3: Genes|Genomes|Genetics}, publisher={Genetics Society of America}, author={Tyrmi, Jaakko S. and Vuosku, Jaana and Acosta, Juan J. and Li, Zhen and Sterck, Lieven and Cervera, Maria T. and Savolainen, Outi and Pyhäjärvi, Tanja}, year={2020}, month={Aug}, pages={2683–2696} } @article{martins_yuliarto_antes_sabki_prasetyo_unda_mansfield_hodge_acosta_2020, title={Wood and Pulping Properties Variation of Acacia crassicarpa A.Cunn. ex Benth. and Sampling Strategies for Accurate Phenotyping}, volume={11}, url={https://doi.org/10.3390/f11101043}, DOI={10.3390/f11101043}, number={10}, journal={Forests}, publisher={MDPI AG}, author={Martins, Gustavo Salgado and Yuliarto, Muhammad and Antes, Rudine and Sabki and Prasetyo, Agung and Unda, Faride and Mansfield, Shawn D. and Hodge, Gary R. and Acosta, Juan Jose}, year={2020}, month={Sep}, pages={1043} } @article{acosta_fahrenkrog_neves_resende_dervinis_davis_holliday_kirst_2019, title={Exome Resequencing Reveals Evolutionary History, Genomic Diversity, and Targets of Selection in the Conifers Pinus taeda and Pinus elliottii}, volume={11}, ISSN={1759-6653}, url={http://dx.doi.org/10.1093/gbe/evz016}, DOI={10.1093/gbe/evz016}, number={2}, journal={Genome Biology and Evolution}, publisher={Oxford University Press (OUP)}, author={Acosta, Juan J and Fahrenkrog, Annette M and Neves, Leandro G and Resende, Márcio F R and Dervinis, Christopher and Davis, John M and Holliday, Jason A and Kirst, Matias}, editor={Pritham, EllenEditor}, year={2019}, month={Jan}, pages={508–520} } @article{de moraes_dos santos_de lima_aguiar_missiaggia_da costa dias_rezende_gonçalves_acosta_kirst_et al._2018, title={Genomic selection prediction models comparing sequence capture and SNP array genotyping methods}, volume={38}, ISSN={1380-3743 1572-9788}, url={http://dx.doi.org/10.1007/s11032-018-0865-3}, DOI={10.1007/s11032-018-0865-3}, number={9}, journal={Molecular Breeding}, publisher={Springer Science and Business Media LLC}, author={de Moraes, Bráulio Fabiano Xavier and dos Santos, Rodrigo Furtado and de Lima, Bruno Marco and Aguiar, Aurélio Mendes and Missiaggia, Alexandre Alves and da Costa Dias, Donizete and Rezende, Gabriel Dehon Peçanha Sampaio and Gonçalves, Flávia Maria Avelar and Acosta, Juan J. and Kirst, Matias and et al.}, year={2018}, month={Sep} } @article{hodge_acosta_unda_woodbridge_mansfield_2018, title={Global near infrared spectroscopy models to predict wood chemical properties of Eucalyptus}, volume={26}, ISSN={0967-0335 1751-6552}, url={http://dx.doi.org/10.1177/0967033518770211}, DOI={10.1177/0967033518770211}, number={2}, journal={Journal of Near Infrared Spectroscopy}, publisher={SAGE Publications}, author={Hodge, Gary R and Acosta, Juan Jose and Unda, Faride and Woodbridge, William C and Mansfield, Shawn D}, year={2018}, month={Apr}, pages={117–132} } @article{naidoo_christie_acosta_mphahlele_payn_myburg_külheim_2018, title={Terpenes associated with resistance against the gall wasp, Leptocybe invasa, in Eucalyptus grandis}, volume={41}, ISSN={0140-7791}, url={http://dx.doi.org/10.1111/pce.13323}, DOI={10.1111/pce.13323}, number={8}, journal={Plant, Cell & Environment}, publisher={Wiley}, author={Naidoo, Sanushka and Christie, Nanette and Acosta, Juan J. and Mphahlele, Makobatjatji M. and Payn, Kitt G. and Myburg, Alexander A. and Külheim, Carsten}, year={2018}, month={Jun}, pages={1840–1851} } @article{albert_barbazuk_depamphilis_der_leebens-mack_ma_palmer_rounsley_sankoff_schuster_et al._2013, title={The Amborella Genome and the Evolution of Flowering Plants}, volume={342}, ISSN={["1095-9203"]}, url={http://science.sciencemag.org/content/342/6165/1241089.long}, DOI={10.1126/science.1241089}, number={6165}, journal={Science}, author={Albert, Victor A. and Barbazuk, W. Bradley and dePamphilis, Claude W. and Der, Joshua P. and Leebens-Mack, James and Ma, Hong and Palmer, Jeffrey D. and Rounsley, Steve and Sankoff, David and Schuster, Stephan C. and et al.}, year={2013}, month={Dec}, pages={1456–1457} } @article{resende_muñoz_acosta_peter_davis_grattapaglia_resende_kirst_2011, title={Accelerating the domestication of trees using genomic selection: accuracy of prediction models across ages and environments}, volume={193}, ISSN={0028-646X}, url={http://dx.doi.org/10.1111/j.1469-8137.2011.03895.x}, DOI={10.1111/j.1469-8137.2011.03895.x}, number={3}, journal={New Phytologist}, publisher={Wiley}, author={Resende, M. F. R., Jr and Muñoz, P. and Acosta, J. J. and Peter, G. F. and Davis, J. M. and Grattapaglia, D. and Resende, M. D. V. and Kirst, M.}, year={2011}, month={Oct}, pages={617–624} } @article{stability of genomic selection prediction models across ages and environments_2011, url={http://dx.doi.org/10.1186/1753-6561-5-s7-o14}, DOI={10.1186/1753-6561-5-s7-o14}, journal={BMC Proceedings}, year={2011}, month={Dec} } @article{echavarría_correa_patiño_acosta_rueda_2006, title={Evaluación de métodos estadísticos utilizados en trabajos de grado y tesis en los programas de la facultad de ciencias agropecuarias, en un período de tres años}, volume={59}, url={https://www.redalyc.org/articulo.oa?id=179914075012}, number={2}, journal={Revista Facultad Nacional de Agronomía}, author={Echavarría, H. and Correa, G. and Patiño, J.F. and Acosta, J.J. and Rueda, J.A.}, year={2006}, pages={3565–3580} } @article{echavarría sánchez_correa londoño_patiño díez_acosta jaramillo_rueda restrepo_2006, title={Evaluación de métodos estadísticos utilizados en trabajos de grado y tesis en los programas de la facultad de ciencias agropecuarias, en un período de tres años.}, volume={59}, url={https://revistas.unal.edu.co/index.php/refame/article/view/24349}, number={2}, journal={Revista Facultad Nacional de Agronomía, Medellín.}, author={Echavarría Sánchez, H. and Correa Londoño, G. and Patiño Díez, J. and Acosta Jaramillo, J. and Rueda Restrepo, J.}, year={2006}, month={Aug}, pages={3465–3580} } @article{ruiz suescún_2005, title={Escorrentía superficial en bosques montanos naturales y plantados de Antioquia, Colombia}, volume={S.l.], v. 58, n. 1}, url={https://revistas.unal.edu.co/index.php/refame/article/view/21509/22498}, journal={Revista Facultad Nacional de Agronomía, Medellín.}, author={Ruiz Suescún, Oscar Andrés}, year={2005}, month={Apr}, pages={2635–2649,} } @article{ruiz_acosta_león_2005, title={Escorrentía superficial en bosques montanos naturales y plantados de Antioquia, Colombia}, volume={58}, url={http://www.bdigital.unal.edu.co/24359/1/21509-73485-1-PB.pdf}, number={1}, journal={Revista Facultad Nacional de Agronomía}, author={Ruiz, O.A. and Acosta, J.J. and León, J.D.}, year={2005}, pages={2635–2649} }