Works (110)

2019 article

From Ethylene-Auxin Interactions to Auxin Biosynthesis and Signal Integration

Stepanova, A. N., & Alonso, J. M. (2019, July). PLANT CELL, Vol. 31, pp. 1393–1394.

By: A. Stepanova & J. Alonso

Sources: Web Of Science, ORCID
Added: July 29, 2019

2019 journal article

RGL2 controls flower development, ovule number and fertility in Arabidopsis

PLANT SCIENCE, 281, 82–92.

By: M. Dolores Gomez, C. Fuster-Almunia, J. Ocana-Cuesta, J. Alonso & M. Perez-Amador

Sources: Web Of Science, ORCID
Added: April 2, 2019

2019 article

RiboStreamR: a web application for quality control, analysis, and visualization of Ribo-seq data

BMC GENOMICS, Vol. 20.

By: P. Perkins, S. Mazzoni-Putman, A. Stepanova, J. Alonso & S. Heber

Sources: Web Of Science, ORCID
Added: July 1, 2019

2018 journal article

Local Auxin Biosynthesis Is a Key Regulator of Plant Development

DEVELOPMENTAL CELL, 47(3), 306-.

By: J. Brumos, L. Robles, J. Yun, T. Vu, S. Jackson, J. Alonso, A. Stepanova

Sources: NC State University Libraries, ORCID
Added: November 26, 2018

2017 journal article

Transcriptomic analysis in strawberry fruits reveals active auxin biosynthesis and signaling in the ripe receptacle

Frontiers in Plant Science, 8.

By: E. Estrada-Johnson, F. Csukasi, C. Pizarro, J. Vallarino, Y. Kiryakova, A. Vioque, J. Brumos, N. Medina-Escobar ...

Source: NC State University Libraries
Added: August 6, 2018

2017 article

Transcriptomic analysis in strawberry fruits reveals active auxin biosynthesis and signaling in the ripe receptacle (vol 8, pg 889, 2017)

Frontiers in Plant Science, Vol. 8.

By: E. Estrada-Johnson, F. Csukasi, C. Pizarro, J. Vallarino, Y. Kiryakova, A. Vioque, C. Merchante, J. Brumos ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2017 journal article

Translation regulation in plants: An interesting past, an exciting present and a promising future

Plant Journal, 90(4), 628–653.

By: C. Merchante, A. Stepanova & J. Alonso

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2016 review

50 years of Arabidopsis research: Highlights and future directions

[Review of ]. New Phytologist, 209(3), 921–944.

By: N. Provart, J. Alonso, S. Assmann, D. Bergmann, S. Brady, J. Brkljacic, J. Browse, C. Chapple ...

Source: NC State University Libraries
Added: August 6, 2018

2016 journal article

Auxin catabolism unplugged: Role of IAA oxidation in auxin homeostasis

Proceedings of the National Academy of Sciences of the United States of America, 113(39), 10742–10744.

By: A. Stepanova & J. Alonso

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2016 journal article

Cutting out the middle man in light-hormone interactions

Developmental Cell, 39(5), 524–526.

By: A. Stepanova & J. Alonso

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2016 journal article

Genome-wide search for translated upstream open reading frames in Arabidopsis thaliana

IEEE Transactions on Nanobioscience, 15(2), 150–159.

By: Q. Hu, C. Merchante, A. Stepanova, J. Alonso & S. Heber

Source: NC State University Libraries
Added: August 6, 2018

2015 journal article

A Recombineering-based gene tagging system for Arabidopsis

Bacterial Artificial Chromosomes, 2nd Edition, 1227, 233–243.

By: J. Alonso & A. Stepanova

Source: NC State University Libraries
Added: August 6, 2018

2015 conference paper

A stacking-based approach to identify translated upstream open reading frames in Arabidopsis thaliana

Bioinformatics research and applications (isbra 2015), 9096, 138–149.

By: Q. Hu, C. Merchante, A. Stepanova, J. Alonso & S. Heber

Source: NC State University Libraries
Added: August 6, 2018

2015 journal article

Auxin influx carriers control vascular patterning and xylem differentiation in Arabidopsis thaliana

PLoS Genetics, 11(4).

By: N. Fabregas, P. Formosa-Jordan, A. Confraria, R. Siligato, J. Alonso, R. Swarup, M. Bennett, A. Mahonen, A. Cano-Delgado, M. Ibanes

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2015 journal article

Gene-specific translation regulation mediated by the hormone-signaling molecule EIN2

Cell, 163(3), 684–697.

By: C. Merchante, J. Brumos, J. Yun, Q. Hu, K. Spencer, P. Enriquez, B. Binder, S. Heber, A. Stepanova, J. Alonso

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2015 conference paper

Mining transcript features related to translation in Arabidopsis using LASSO and random forest

International conference on computational advances in bio and medical.

By: Q. Hu, C. Merchante, A. Stepanova, J. Alonso & S. Heber

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2015 journal article

Plant functional genomics methods and protocols second edition preface

Plant Functional Genomics: Methods and Protocols, 2nd Edition, 1284, V-.

By: J. Alonso & A. Stepanova

Source: NC State University Libraries
Added: August 6, 2018

2015 book

Plant functional genomics: Methods and protocols

New York: Humana Press.

Source: NC State University Libraries
Added: August 6, 2018

2015 journal article

Regulator of bulb biogenesis1 (RBB1) is involved in vacuole bulb formation in arabidopsis

PLoS One, 10(4).

By: S. Han, J. Alonso & M. Rojas-Pierce

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2015 journal article

Transcriptional control of tissue formation throughout root development

Science, 350(6259), 426–430.

By: M. Moreno-Risueno, R. Sozzani, G. Yardimci, J. Petricka, T. Vernoux, I. Blilou, J. Alonso, C. Winter ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2014 chapter

Arabidopsis Transformation with Large Bacterial Artificial Chromosomes

In Arabidopsis Protocols (pp. 271–283).

By: J. Alonso & A. Stepanova

Source: ORCID
Added: December 19, 2019

2014 journal article

Genetic aspects of auxin biosynthesis and its regulation

Physiologia Plantarum, 151(1), 3–12.

By: J. Brumos, J. Alonso & A. Stepanova

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2014 journal article

Systems analysis of auxin transport in the arabidopsis root apex

Plant Cell, 26(3), 862–875.

By: L. Band, D. Wells, J. Fozard, T. Ghetiu, A. French, M. Pound, M. Wilson, L. Yu ...

Source: NC State University Libraries
Added: August 6, 2018

2013 journal article

Arabidopsis SABRE and CLASP interact to stabilize cell division plane orientation and planar polarity

Nature Communications, 4.

By: S. Pietra, A. Gustavsson, C. Kiefer, L. Kalmbach, P. Hörstedt, Y. Ikeda, A. Stepanova, J. Alonso, M. Grebe

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2013 journal article

Ethylene signaling: simple ligand, complex regulation

Current Opinion in Plant Biology, 16(5), 554–560.

By: C. Merchante, J. Alonso & A. Stepanova

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2013 journal article

Kinetic analysis of Arabidopsis glucosyltransferase UGT74B1 illustrates a general mechanism by which enzymes can escape product inhibition

Biochemical Journal (London, England : 1984), 450, 37–46.

By: J. Kopycki, E. Wieduwild, J. Kohlschmidt, W. Brandt, A. Stepanova, J. Alonso, M. Pedras, S. Abel, C. Grubb

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2013 journal article

Local Auxin Sources Orient the Apical-Basal Axis in< i> Arabidopsis Embryos

Local Auxin Sources Orient the Apical-Basal Axis in< i> Arabidopsis Embryos. Current Biology, 23(24), 2506–2512.

By: H. Robert, P. Grones, A. Stepanova, L. Robles, A. Lokerse, J. Alonso, D. Weijers, J. Friml

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2013 journal article

Molecular mechanisms of ethyleneauxin interaction

Molecular Plant, 6(6), 1734–1737.

By: L. Robles, A. Stepanova & J. Alonso

Source: NC State University Libraries
Added: August 6, 2018

2013 journal article

Molecular mechanisms of ethylene–auxin interactions

Molecular Plant, sst113.

By: L. Robles, A. Stepanova & J. Alonso

Source: ORCID
Added: December 19, 2019

2012 journal article

AUX/LAX genes encode a family of auxin influx transporters that perform distinct functions during Arabidopsis development

The Plant Cell Online, 24(7), 2874–2885.

By: B. Péret, K. Swarup, A. Ferguson, M. Seth, Y. Yang, S. Dhondt, N. James, I. Casimiro, P. Perry, A. Syed

Source: ORCID
Added: December 19, 2019

2012 journal article

AUX/LAX genes encode a family of auxin influx transporters that perform distinct functions during arabidopsis development

Plant Cell, 24(7), 2874–2885.

By: B. Peret, K. Swarup, A. Ferguson, M. Seth, Y. Yang, S. Dhondt, N. James, I. Casimiro ...

Source: NC State University Libraries
Added: August 6, 2018

2011 journal article

A recombineering‐based gene tagging system for Arabidopsis

The Plant Journal, 66(4), 712–723.

By: R. Zhou, L. Benavente, A. Stepanova & J. Alonso

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2011 journal article

A small-molecule screen identifies L-kynurenine as a competitive inhibitor of TAA1/TAR activity in ethylene-directed auxin biosynthesis and root growth in Arabidopsis

The Plant Cell Online, 23(11), 3944–3960.

By: W. He, J. Brumos, H. Li, Y. Ji, M. Ke, X. Gong, Q. Zeng, W. Li ...

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2011 journal article

Bypassing transcription: a shortcut in cytokinin-auxin interactions

Developmental Cell, 21(4), 608–610.

By: A. Stepanova & J. Alonso

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2011 journal article

The Arabidopsis YUCCA1 flavin monooxygenase functions in the indole-3-pyruvic acid branch of auxin biosynthesis

The Plant Cell Online, 23(11), 3961–3973.

By: A. Stepanova, J. Yun, L. Robles, O. Novak, W. He, H. Guo, K. Ljung, J. Alonso

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2009 journal article

A combinatorial interplay among the 1-aminocyclopropane-1-carboxylate isoforms regulates ethylene biosynthesis in Arabidopsis thaliana

Genetics, 183(3), 979–1003.

By: A. Tsuchisaka, G. Yu, H. Jin, J. Alonso, J. Ecker, X. Zhang, S. Gao, A. Theologis

Source: ORCID
Added: December 19, 2019

2009 journal article

Ethylene signaling and response: where different regulatory modules meet

Current Opinion in Plant Biology, 12(5), 548–555.

By: A. Stepanova & J. Alonso

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2009 journal article

Local auxin biosynthesis modulates gradient-directed planar polarity in Arabidopsis

Nature Cell Biology, 11(6), 731–738.

By: Y. Ikeda, S. Men, U. Fischer, A. Stepanova, J. Alonso, K. Ljung, M. Grebe

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2008 journal article

< i> TAA1-Mediated Auxin Biosynthesis Is Essential for Hormone Crosstalk and Plant Development

< i> TAA1-Mediated Auxin Biosynthesis Is Essential for Hormone Crosstalk and Plant Development. Cell, 133(1), 177–191.

By: A. Stepanova, J. Robertson-Hoyt, J. Yun, L. Benavente, D. Xie, K. Doležal, A. Schlereth, G. Jürgens, J. Alonso

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2008 journal article

Potential sites of bioactive gibberellin production during reproductive growth in Arabidopsis

The Plant Cell Online, 20(2), 320–336.

By: J. Hu, M. Mitchum, N. Barnaby, B. Ayele, M. Ogawa, E. Nam, W. Lai, A. Hanada, J. Alonso, J. Ecker

Source: ORCID
Added: December 19, 2019

2008 journal article

The Arabidopsis phytochrome-interacting factor PIF7, together with PIF3 and PIF4, regulates responses to prolonged red light by modulating phyB levels

The Plant Cell Online, 20(2), 337–352.

By: P. Leivar, E. Monte, B. Al-Sady, C. Carle, A. Storer, J. Alonso, J. Ecker, P. Quail

Source: ORCID
Added: December 19, 2019

2007 journal article

A WD40 domain cyclophilin interacts with histone H3 and functions in gene repression and organogenesis in Arabidopsis

The Plant Cell Online, 19(8), 2403–2416.

By: H. Li, Z. He, G. Lu, S. Lee, J. Alonso, J. Ecker, S. Luan

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2007 journal article

An adapter ligation-mediated PCR method for high-throughput mapping of T-DNA inserts in the Arabidopsis genome

Nature Protocols, 2(11), 2910–2917.

By: R. O’Malley, J. Alonso, C. Kim, T. Leisse & J. Ecker

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2007 journal article

Genome-Wide High-Resolution Mapping of Exosome Substrates Reveals Hidden Features in the< i> Arabidopsis Transcriptome

Genome-Wide High-Resolution Mapping of Exosome Substrates Reveals Hidden Features in the< i> Arabidopsis Transcriptome. Cell, 131(7), 1340–1353.

By: J. Chekanova, B. Gregory, S. Reverdatto, H. Chen, R. Kumar, T. Hooker, J. Yazaki, P. Li, N. Skiba, Q. Peng

Source: ORCID
Added: December 19, 2019

2007 journal article

Multilevel interactions between ethylene and auxin in Arabidopsis roots

The Plant Cell Online, 19(7), 2169–2185.

By: A. Stepanova, J. Yun, A. Likhacheva & J. Alonso

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2006 journal article

CDPKs CPK6 and CPK3 function in ABA regulation of guard cell S-type anion-and Ca2+-permeable channels and stomatal closure

PLoS Biology, 4(10), e327.

By: I. Mori, Y. Murata, Y. Yang, S. Munemasa, Y. Wang, S. Andreoli, H. Tiriac, J. Alonso, J. Harper, J. Ecker

Source: ORCID
Added: December 19, 2019

2006 journal article

Downregulation of ClpR2 leads to reduced accumulation of the ClpPRS protease complex and defects in chloroplast biogenesis in Arabidopsis

The Plant Cell Online, 18(7), 1704–1721.

By: A. Rudella, G. Friso, J. Alonso, J. Ecker & K. Wijk

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2006 journal article

Localization of iron in Arabidopsis seed requires the vacuolar membrane transporter VIT1

Science, 314(5803), 1295–1298.

By: S. Kim, T. Punshon, A. Lanzirotti, L. Li, J. Alonso, J. Ecker, J. Kaplan, M. Guerinot

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2006 journal article

Molecular mechanisms of ethylene signaling in Arabidopsis

Molecular Biosystems, 2(3-4), 165–173.

By: L. Benavente & J. Alonso

Source: ORCID
Added: December 19, 2019

2006 journal article

Moving forward in reverse: genetic technologies to enable genome-wide phenomic screens in Arabidopsis

Nature Reviews Genetics, 7(7), 524–536.

By: J. Alonso & J. Ecker

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2006 chapter

PCR-based screening for insertional mutants

In Arabidopsis Protocols (pp. 163–172).

By: A. Stepanova & J. Alonso

Source: ORCID
Added: December 19, 2019

2006 journal article

PHYTOCHROME KINASE SUBSTRATE 1 is a phototropin 1 binding protein required for phototropism

Proceedings of the National Academy of Sciences, 103(26), 10134–10139.

By: P. Lariguet, I. Schepens, D. Hodgson, U. Pedmale, M. Trevisan, C. Kami, M. Carbonnel, J. Alonso, J. Ecker, E. Liscum

Source: ORCID
Added: December 19, 2019

2006 journal article

RACK1 mediates multiple hormone responsiveness and developmental processes in Arabidopsis

Journal of Experimental Botany, 57(11), 2697–2708.

By: J. Chen, H. Ullah, B. Temple, J. Liang, J. Guo, J. Alonso, J. Ecker, A. Jones

Source: ORCID
Added: December 19, 2019

2006 journal article

The Arabidopsis histidine phosphotransfer proteins are redundant positive regulators of cytokinin signaling

The Plant Cell Online, 18(11), 3073–3087.

By: C. Hutchison, J. Li, C. Argueso, M. Gonzalez, E. Lee, M. Lewis, B. Maxwell, T. Perdue, G. Schaller, J. Alonso

Source: ORCID
Added: December 19, 2019

2005 journal article

" Flagellin is not a major defense elicitor in Ralstonia solanacearum cells (vol 17, pg 696, 2005)

MOLECULAR PLANT-MICROBE INTERACTIONS, 18(9), 1024.

By: C. Pfund, J. Tans-Kersten, F. Dunning, J. Alonso, J. Ecker, C. Allen, A. Bent

Source: ORCID
Added: December 19, 2019

2005 journal article

A link between ethylene and auxin uncovered by the characterization of two root-specific ethylene-insensitive mutants in Arabidopsis

The Plant Cell Online, 17(8), 2230–2242.

By: A. Stepanova, J. Hoyt, A. Hamilton & J. Alonso

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2005 journal article

An Arabidopsis NPR1‐like gene, NPR4, is required for disease resistance

The Plant Journal, 41(2), 304–318.

By: G. Liu, E. Holub, J. Alonso, J. Ecker & P. Fobert

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2005 journal article

Arabidopsis ethylene signaling pathway

Science Signaling, 2005(276), cm4.

By: A. Stepanova & J. Alonso

Source: ORCID
Added: December 19, 2019

2005 journal article

Auxin response factors ARF6 and ARF8 promote jasmonic acid production and flower maturation

Development, 132(18), 4107–4118.

By: P. Nagpal, C. Ellis, H. Weber, S. Ploense, L. Barkawi, T. Guilfoyle, G. Hagen, J. Alonso, J. Cohen, E. Farmer

Source: ORCID
Added: December 19, 2019

2005 journal article

Class III homeodomain-leucine zipper gene family members have overlapping, antagonistic, and distinct roles in Arabidopsis development

The Plant Cell Online, 17(1), 61–76.

By: M. Prigge, D. Otsuga, J. Alonso, J. Ecker, G. Drews & S. Clark

Source: ORCID
Added: December 19, 2019

2005 journal article

Ethylene signalling and response pathway: a unique signalling cascade with a multitude of inputs and outputs

Physiologia Plantarum, 123(2), 195–206.

By: A. Stepanova & J. Alonso

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2005 journal article

Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19

The Plant Cell Online, 17(2), 444–463.

By: Y. Okushima, P. Overvoorde, K. Arima, J. Alonso, A. Chan, C. Chang, J. Ecker, B. Hughes, A. Lui, D. Nguyen

Source: ORCID
Added: December 19, 2019

2005 journal article

Functional genomic analysis of the AUXIN/INDOLE-3-ACETIC ACID gene family members in Arabidopsis thaliana

The Plant Cell Online, 17(12), 3282–3300.

By: P. Overvoorde, Y. Okushima, J. Alonso, A. Chan, C. Chang, J. Ecker, B. Hughes, A. Liu, C. Onodera, H. Quach

Source: ORCID
Added: December 19, 2019

2005 journal article

Multiple type-B response regulators mediate cytokinin signal transduction in Arabidopsis

The Plant Cell Online, 17(11), 3007–3018.

By: M. Mason, D. Mathews, D. Argyros, B. Maxwell, J. Kieber, J. Alonso, J. Ecker, G. Schaller

Source: ORCID
Added: December 19, 2019

2005 journal article

NPH4/ARF7 and ARF19 promote leaf expansion and auxin‐induced lateral root formation

The Plant Journal, 43(1), 118–130.

By: J. Wilmoth, S. Wang, S. Tiwari, A. Joshi, G. Hagen, T. Guilfoyle, J. Alonso, J. Ecker, J. Reed

Source: ORCID
Added: December 19, 2019

2005 journal article

Phytochrome-specific type 5 phosphatase controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer

Cell, 120(3), 395–406.

By: J. Ryu, J. Kim, T. Kunkel, B. Kim, D. Cho, S. Hong, S. Kim, A. Fernández, Y. Kim, J. Alonso

Source: ORCID
Added: December 19, 2019

2004 journal article

A homolog of prokaryotic thiol disulfide transporter CcdA is required for the assembly of the cytochrome b6f complex in Arabidopsis chloroplasts

Journal of Biological Chemistry, 279(31), 32474–32482.

By: M. Page, P. Hamel, S. Gabilly, H. Zegzouti, J. Perea, J. Alonso, J. Ecker, S. Theg, S. Christensen, S. Merchant

Source: ORCID
Added: December 19, 2019

2004 journal article

CBF2/DREB1C is a negative regulator of CBF1/DREB1B and CBF3/DREB1A expression and plays a central role in stress tolerance in Arabidopsis

Proceedings of the National Academy of Sciences of the United States of America, 101(11), 3985–3990.

By: F. Novillo, J. Alonso, J. Ecker & J. Salinas

Source: ORCID
Added: December 19, 2019

2004 journal article

Convergence of Signaling Pathways in the Control of Differential Cell Growth in< i> Arabidopsis

Convergence of Signaling Pathways in the Control of Differential Cell Growth in< i> Arabidopsis. Developmental Cell, 7(2), 193–204.

By: H. Li, P. Johnson, A. Stepanova, J. Alonso & J. Ecker

Source: ORCID
Added: December 19, 2019

2004 journal article

Convergence of signaling of differential cell growth pathways in the control in Arabidopsis

Developmental Cell, 7(2), 193–204.

By: H. Li, P. Johnson, A. Stepanova, J. Alonso & J. Ecker

Source: ORCID
Added: December 19, 2019

2004 journal article

DELLA proteins and gibberellin-regulated seed germination and floral development in Arabidopsis

Plant Physiology, 135(2), 1008–1019.

By: L. Tyler, S. Thomas, J. Hu, A. Dill, J. Alonso, J. Ecker, T. Sun

Source: ORCID
Added: December 19, 2019

2004 journal article

Flagellin is not a major defense elicitor in Ralstonia solanacearum cells or extracts applied to Arabidopsis thaliana

Molecular Plant-Microbe Interactions, 17(6), 696–706.

By: C. Pfund, J. Tans-Kersten, F. Dunning, J. Alonso, J. Ecker, C. Allen, A. Bent

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2004 journal article

GCR1 can act independently of heterotrimeric G-protein in response to brassinosteroids and gibberellins in Arabidopsis seed germination

Plant Physiology, 135(2), 907–915.

By: J. Chen, S. Pandey, J. Huang, J. Alonso, J. Ecker, S. Assmann, A. Jones

Source: ORCID
Added: December 19, 2019

2004 journal article

Regulation of flowering time in Arabidopsis by K homology domain proteins

Proceedings of the National Academy of Sciences of the United States of America, 101(34), 12759–12764.

By: T. Mockler, X. Yu, D. Shalitin, D. Parikh, T. Michael, J. Liou, J. Huang, Z. Smith, J. Alonso, J. Ecker

Source: ORCID
Added: December 19, 2019

2004 journal article

The canonical ethylene signaling pathway

Science Signaling, 2004(221), cm1.

By: A. Stepanova & J. Alonso

Source: ORCID
Added: December 19, 2019

2004 journal article

The ethylene signaling pathway

Science, 306(5701), 1513–1515.

By: J. Alonso & A. Stepanova

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2004 journal article

The phytochrome-interacting transcription factor, PIF3, acts early, selectively, and positively in light-induced chloroplast development

Proceedings of the National Academy of Sciences of the United States of America, 101(46), 16091–16098.

By: E. Monte, J. Tepperman, B. Al-Sady, K. Kaczorowski, J. Alonso, J. Ecker, X. Li, Y. Zhang, P. Quail

Source: ORCID
Added: December 19, 2019

2004 journal article

Type-A Arabidopsis response regulators are partially redundant negative regulators of cytokinin signaling

The Plant Cell Online, 16(3), 658–671.

By: J. To, G. Haberer, F. Ferreira, J. Deruère, M. Mason, G. Schaller, J. Alonso, J. Ecker, J. Kieber

Source: ORCID
Added: December 19, 2019

2003 journal article

< i> Arabidopsis RIN4 Is a Target of the Type III Virulence Effector AvrRpt2 and Modulates RPS2-Mediated Resistance

< i> Arabidopsis RIN4 Is a Target of the Type III Virulence Effector AvrRpt2 and Modulates RPS2-Mediated Resistance. Cell, 112(3), 379–389.

By: D. Mackey, Y. Belkhadir, J. Alonso, J. Ecker & J. Dangl

Source: ORCID
Added: December 19, 2019

2003 journal article

A growth regulatory loop that provides homeostasis to phytochrome A signaling

The Plant Cell Online, 15(12), 2966–2978.

By: P. Lariguet, H. Boccalandro, J. Alonso, J. Ecker, J. Chory, J. Casal, C. Fankhauser

Source: ORCID
Added: December 19, 2019

2003 journal article

Chloroplast to nucleus communication triggered by accumulation of Mg-protoporphyrinIX

Nature, 421(6918), 79–83.

By: Å. Strand, T. Asami, J. Alonso, J. Ecker & J. Chory

Source: ORCID
Added: December 19, 2019

2003 journal article

Enhanced fitness conferred by naturally occurring variation in the circadian clock

Science, 302(5647), 1049–1053.

By: T. Michael, P. Salome, J. Hannah, T. Spencer, E. Sharp, M. McPeek, J. Alonso, J. Ecker, C. McClung

Source: ORCID
Added: December 19, 2019

2003 journal article

Five components of the ethylene-response pathway identified in a screen for weak ethylene-insensitive mutants in Arabidopsis

Proceedings of the National Academy of Sciences, 100(5), 2992–2997.

By: J. Alonso, A. Stepanova, R. Solano, E. Wisman, S. Ferrari, F. Ausubel, J. Ecker

Source: ORCID
Added: December 19, 2019

2003 journal article

GUN4, a regulator of chlorophyll synthesis and intracellular signaling

Science, 299(5608), 902–906.

By: R. Larkin, J. Alonso, J. Ecker & J. Chory

Source: ORCID
Added: December 19, 2019

2003 journal article

Genome-wide insertional mutagenesis of Arabidopsis thaliana

Science, 301(5633), 653–657.

By: J. Alonso, A. Stepanova, T. Leisse, C. Kim, H. Chen, P. Shinn, D. Stevenson, J. Zimmerman, P. Barajas, R. Cheuk

Source: ORCID
Added: December 19, 2019

2003 journal article

Genome-wide insertional mutagenesis of Arabidopsis thaliana (vol 301, pg 653, 2003)

Science, 301(5641), 1849.

By: J. Alonso

Source: ORCID
Added: December 19, 2019

2003 journal article

Isolation and characterization of phyC mutants in Arabidopsis reveals complex crosstalk between phytochrome signaling pathways

The Plant Cell Online, 15(9), 1962–1980.

By: E. Monte, J. Alonso, J. Ecker, Y. Zhang, X. Li, J. Young, S. Austin-Phillips, P. Quail

Source: ORCID
Added: December 19, 2019

2003 journal article

Mutations in the Ca2+/H+ transporter CAX1 increase CBF/DREB1 expression and the cold-acclimation response in Arabidopsis

The Plant Cell Online, 15(12), 2940–2951.

By: R. Catalá, E. Santos, J. Alonso, J. Ecker, J. Martínez-Zapater & J. Salinas

Source: ORCID
Added: December 19, 2019

2003 chapter

T-DNA mutagenesis in Arabidopsis

In Plant Functional Genomics (pp. 177–187).

By: J. Alonso & A. Stepanova

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2003 journal article

The Balance between phytochrome kinase substrate1 and PKS2 Provides Homeostasis for Phytochrome A Signaling in Arabidopsis

The Plant Cell Online.

By: P. Lariguet, H. Boccalandro, J. Alonso, J. Ecker, J. Chory, J. Casal, C. Fankhausera

Source: ORCID
Added: December 19, 2019

2003 journal article

The β-subunit of the Arabidopsis G protein negatively regulates auxin-induced cell division and affects multiple developmental processes

The Plant Cell Online, 15(2), 393–409.

By: H. Ullah, J. Chen, B. Temple, D. Boyes, J. Alonso, K. Davis, J. Ecker, A. Jones

Source: ORCID
Added: December 19, 2019

2002 journal article

A role for peroxisomes in photomorphogenesis and development of Arabidopsis

Science, 297(5580), 405–409.

By: J. Hu, M. Aguirre, C. Peto, J. Alonso, J. Ecker & J. Chory

Source: ORCID
Added: December 19, 2019

2002 journal article

De-Etiolated 1 and Damaged DNA Binding Protein 1 Interact to Regulate< i> Arabidopsis Photomorphogenesis

De-Etiolated 1 and Damaged DNA Binding Protein 1 Interact to Regulate< i> Arabidopsis Photomorphogenesis. Current Biology, 12(17), 1462–1472.

By: D. Schroeder, M. Gahrtz, B. Maxwell, R. Cook, J. Kan, J. Alonso, J. Ecker, J. Chory

Source: ORCID
Added: December 19, 2019

2002 journal article

NPSN11 is a cell plate-associated SNARE protein that interacts with the syntaxin KNOLLE

Plant Physiology, 129(2), 530–539.

By: H. Zheng, S. Bednarek, A. Sanderfoot, J. Alonso, J. Ecker & N. Raikhel

Source: ORCID
Added: December 19, 2019

2002 journal article

Three redundant brassinosteroid early response genes encode putative bHLH transcription factors required for normal growth

Genetics, 162(3), 1445–1456.

By: D. Friedrichsen, J. Nemhauser, T. Muramitsu, J. Maloof, J. Alonso, J. Ecker, M. Furuya, J. Chory

Source: ORCID
Added: December 19, 2019

2002 journal article

Trp-dependent auxin biosynthesis in Arabidopsis: involvement of cytochrome P450s CYP79B2 and CYP79B3

Genes & Development, 16(23), 3100–3112.

By: Y. Zhao, A. Hull, N. Gupta, K. Goss, J. Alonso, J. Ecker, J. Normanly, J. Chory, J. Celenza

Source: ORCID
Added: December 19, 2019

2001 journal article

An Arabidopsis circadian clock component interacts with both CRY1 and phyB

Nature, 410(6827), 487–490.

By: J. Jarillo, J. Capel, R. Tang, H. Yang, J. Alonso, J. Ecker, A. Cashmore

Source: ORCID
Added: December 19, 2019

2001 journal article

Phototropin-related NPL1 controls chloroplast relocation induced by blue light

Nature, 410(6831), 952–954.

By: J. Jarillo, H. Gabrys, J. Capel, J. Alonso, J. Ecker & A. Cashmore

Source: ORCID
Added: December 19, 2019

2001 journal article

The ethylene pathway: a paradigm for plant hormone signaling and interaction

Science Signaling, 2001(70), re1.

By: J. Alonso & J. Ecker

Source: ORCID
Added: December 19, 2019

2000 journal article

Ethylene captures a metal! Metal ions are involved in ethylene perception and signal transduction

Plant and Cell Physiology, 41(5), 548–555.

By: T. Hirayama & J. Alonso

Source: ORCID
Added: December 19, 2019

2000 journal article

Involvement of NRAMP1 from Arabidopsis thaliana in iron transport

Biochem. J, 347, 749–755.

By: C. Curie, J. Alonso, M. Le Jean, J. Ecker & J. Briat

Source: ORCID
Added: December 19, 2019

2000 journal article

Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana

Nature, 408(6814), 816–820.

By: A. Theologis, J. Ecker, C. Palm, N. Federspiel, S. Kaul, O. White, J. Alonso, H. Altafi, R. Araujo, C. Bowman

Source: ORCID
Added: December 19, 2019

1999 journal article

EIN2, a bifunctional transducer of ethylene and stress responses in Arabidopsis

Science, 284(5423), 2148–2152.

By: J. Alonso, T. Hirayama, G. Roman, S. Nourizadeh & J. Ecker

Source: ORCID
Added: December 19, 2019

1999 chapter

Ethylene Perception and Response in Citrus Fruit

In Biology and Biotechnology of the Plant Hormone Ethylene II (pp. 137–143).

By: X. Cubells-Martinez, J. Alonso, M. Sanchez-Ballesta & A. Granell

Source: ORCID
Added: December 19, 2019

1999 journal article

RESPONSIVE-TO-ANTAGONIST1, a Menkes/Wilson Disease–Related Copper Transporter, Is Required for Ethylene Signaling in< i> Arabidopsis

RESPONSIVE-TO-ANTAGONIST1, a Menkes/Wilson Disease–Related Copper Transporter, Is Required for Ethylene Signaling in< i> Arabidopsis. Cell, 97(3), 383–393.

By: T. Hirayama, J. Kieber, N. Hirayama, M. Kogan, P. Guzman, S. Nourizadeh, J. Alonso, W. Dailey, A. Dancis, J. Ecker

Source: ORCID
Added: December 19, 2019

1995 journal article

A non-photosynthetic ferredoxin gene is induced by ethylene in Citrus organs

Plant Molecular Biology, 29(6), 1211–1221.

By: J. Alonso, J. Chamarro & A. Granell

Source: ORCID
Added: December 19, 2019

1995 journal article

A putative vacuolar processing protease is regulated by ethylene and also during fruit ripening in Citrus fruit

Plant Physiology, 109(2), 541–547.

By: J. Alonso & A. Granell

Source: ORCID
Added: December 19, 2019

1995 journal article

Evidence for the involvement of ethylene in the expression of specific RNAs during maturation of the orange, a non-climacteric fruit

Plant Molecular Biology, 29(2), 385–390.

By: J. Alonso, J. Chamarro & A. Granell

Source: ORCID
Added: December 19, 2019

1992 journal article

Two dimensional gel electrophoresis patterns of total, in vivo labelled and in vitro translated polypeptides from orange flavedo during maturation and following ethylene treatment

Physiologia Plantarum, 85(2), 147–156.

By: J. Alonso, J. García‐Martínez & J. Chamarro

Source: ORCID
Added: December 19, 2019

conference paper

Deep sequencing of ribosomal footprints for studying genome-wide mRNA translation in plants

Merchante, K., Hu, Q., Stepanova, A. N., Alonso, J. M., & Heber, S.

By: K. Merchante, Q. Hu, A. Stepanova, J. Alonso & S. Heber

Source: ORCID
Added: December 19, 2019

Employment

2001 - present

North Carolina State University Raleigh, NC, US
Professor Plant and Microbial Biology