Joakim M. Andersen

Works (3)

Updated: July 5th, 2023 15:38

2019 journal article

Short communication: Transcriptional response to a large genomic island deletion in the dairy starter culture Streptococcus thermophilus

JOURNAL OF DAIRY SCIENCE, 102(9), 7800–7806.

By: K. Selle n, J. Andersen n & R. Barrangou n 

author keywords: fermentation; Streptococcus thermophilus; transcriptome; CRISPR
MeSH headings : Animals; Clustered Regularly Interspaced Short Palindromic Repeats; Fermentation; Gene Deletion; Gene Expression Regulation, Bacterial / physiology; Genomic Islands; Genomics; Lactic Acid / metabolism; Lactobacillus delbrueckii / metabolism; Milk / microbiology; Streptococcus thermophilus / genetics; Streptococcus thermophilus / metabolism; Transcriptome; Yogurt / microbiology
TL;DR: Results suggest that deletion of a 102-kb genomic island in Strep. (via Semantic Scholar)
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Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 26, 2019

2017 journal article

Deletion of Lipoteichoic Acid Synthase Impacts Expression of Genes Encoding Cell Surface Proteins in Lactobacillus acidophilus

Frontiers in Microbiology, 8.

By: K. Selle n, Y. Goh n, B. Johnson n, O. Sarah  n, J. Andersen n, R. Barrangou n , T. Klaenhammer n

TL;DR: Results elucidate the impact of ltaS deletion on the transcriptome and extracellular proteins of L. acidophilus, suggesting roles of LTA in cell morphology and ion homeostasis as a structural component of the Gram positive cell wall. (via Semantic Scholar)
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Sources: NC State University Libraries, ORCID, NC State University Libraries
Added: August 6, 2018

2016 journal article

CRISPR Diversity and Microevolution in Clostridium difficile

GENOME BIOLOGY AND EVOLUTION, 8(9), 2841–2855.

By: J. Andersen n, M. Shoup*, C. Robinson*, R. Bitton, K. Olsen* & R. Barrangou n 

author keywords: CRISPR-Cas; CRISPR phylogeny; CRISPR typing; BI/NAP1/RT027/ST1Type-IB
MeSH headings : CRISPR-Cas Systems; Clostridioides difficile / classification; Clostridioides difficile / genetics; Clustered Regularly Interspaced Short Palindromic Repeats; Evolution, Molecular; Phylogeny; Polymorphism, Genetic
TL;DR: Overall, CRISPR-Cas sequences constitute a valuable basis for genotyping of C. difficile isolates, provide insights into the micro-evolutionary events that occur between closely related strains, and reflect the evolutionary trajectory of these genomes. (via Semantic Scholar)
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Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

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