Joseph P. Cassady Jiao, S., Maltecca, C., Gray, K. A., & Cassady, J. P. (2014). Feed intake, average daily gain, feed efficiency, and real-time ultrasound traits in Duroc pigs: I. Genetic parameter estimation and accuracy of genomic prediction. JOURNAL OF ANIMAL SCIENCE, 92(6), 2377–2386. https://doi.org/10.2527/jas.2013-7338 Jiao, S., maltecca, Gray, K. A., & Cassady, J. P. (2014). Feed intake, average daily gain, feed efficiency, and real-time ultrasound traits in Duroc pigs: II. Genomewide association. Journal of Animal Science, 92(7), 2846–2860. https://doi.org/10.2527/jas.2014-7337 Dhakal, K., Maltecca, C., Cassady, J. P., Baloche, G., Williams, C. M., & Washburn, S. P. (2013). Calf birth weight, gestation length, calving ease, and neonatal calf mortality in Holstein, Jersey, and crossbred cows in a pasture system. JOURNAL OF DAIRY SCIENCE, 96(1), 690–698. https://doi.org/10.3168/jds.2012-5817 Ashwell, M. S., Gonda, M. G., Gray, K., Maltecca, C., Audrey T. O'Nan, Cassady, J. P., & Mente, P. L. (2013). Changes in chondrocyte gene expression following in vitro impaction of porcine articular cartilage in an impact injury model. JOURNAL OF ORTHOPAEDIC RESEARCH, 31(3), 385–391. https://doi.org/10.1002/jor.22239 Maltecca, C., Parker, K. L., & Cassady, J. P. (2012). Application of multiple shrinkage methods to genomic predictions. JOURNAL OF ANIMAL SCIENCE, 90(6), 1777–1787. https://doi.org/10.2527/jas.2011-4350 Huang, Y., Maltecca, C., Cassady, J. P., Alexander, L. J., Snelling, W. M., & MacNeil, M. D. (2012). Effects of reduced panel, reference origin, and genetic relationship on imputation of genotypes in Hereford cattle. JOURNAL OF ANIMAL SCIENCE, 90(12), 4203–4208. https://doi.org/10.2527/jas.2011-4728 Velie, B. D., Cassady, J. P., & Whisnant, C. S. (2012). Endocrine response to acute stress in pigs with differing backtest scores. LIVESTOCK SCIENCE, 145(1-3), 140–144. https://doi.org/10.1016/j.livsci.2012.01.008 Gray, K. A., Maltecca, C., Bagnato, A., Dolezal, M., Rossoni, A., Samore, A. B., & Cassady, J. P. (2012). Estimates of marker effects for measures of milk flow in the Italian brown Swiss dairy cattle population. BMC VETERINARY RESEARCH, 8. https://doi.org/10.1186/1746-6148-8-199 Knauer, M. T., Cassady, J. P., Newcom, D. W., & See, M. T. (2012). Gilt development traits associated with genetic line, diet and fertility. LIVESTOCK SCIENCE, 148(1-2), 159–167. https://doi.org/10.1016/j.livsci.2012.05.024 Spake, J. R., Gray, K. A., & Cassady, J. P. (2012). Relationship between backtest and coping styles in pigs. APPLIED ANIMAL BEHAVIOUR SCIENCE, 140(3-4), 146–153. https://doi.org/10.1016/j.applanim.2012.06.007 Maltecca, C., Gray, K. A., Weigel, K. A., Cassady, J. P., & Ashwell, M. (2011). A genome-wide association study of direct gestation length in US Holstein and Italian Brown populations. ANIMAL GENETICS, 42(6), 585–591. https://doi.org/10.1111/j.1365-2052.2011.02188.x Yoder, C. L., Maltecca, C., Cassady, J. P., Flowers, W. L., Price, S., & See, M. T. (2011). Breed differences in pig temperament scores during a performance test and their phenotypic relationship with performance. LIVESTOCK SCIENCE, 136(2-3), 93–101. https://doi.org/10.1016/j.livsci.2010.08.004 Gray, K. A., Smith, T., Maltecca, C., Overton, P., Parish, J. A., & Cassady, J. P. (2011). Differences in hair coat shedding, and effects on calf weaning weight and BCS among Angus dams. LIVESTOCK SCIENCE, 140(1-3), 68–71. https://doi.org/10.1016/j.livsci.2011.02.009 Knauer, M. T., Cassady, J. P., Newcom, D. W., & See, M. T. (2011). Phenotypic and genetic correlations between gilt estrus, puberty, growth, composition, and structural conformation traits with first-litter reproductive measures. JOURNAL OF ANIMAL SCIENCE, 89(4), 935–942. https://doi.org/10.2527/jas.2009-2673 Fix, J. S., Cassady, J. P., Heugten, E., Hanson, D. J., & See, M. T. (2010). Differences in lean growth performance of pigs sampled from 1980 and 2005 commercial swine fed 1980 and 2005 representative feeding programs. LIVESTOCK SCIENCE, 128(1-3), 108–114. https://doi.org/10.1016/j.livsci.2009.11.006 Fix, J. S., Cassady, J. P., Herring, W. O., Holl, J. W., Culbertson, M. S., & See, M. T. (2010). Effect of piglet birth weight on body weight, growth, backfat, and longissimus muscle area of commercial market swine. LIVESTOCK SCIENCE, 127(1), 51–59. https://doi.org/10.1016/j.livsci.2009.08.007 Fix, J. S., Cassady, J. P., Holl, J. W., Herring, W. O., Culbertson, M. S., & See, M. T. (2010). Effect of piglet birth weight on survival and quality of commercial market swine. LIVESTOCK SCIENCE, 132(1-3), 98–106. https://doi.org/10.1016/j.livsci.2010.05.007 Knauer, M. T., Cassady, J. P., Newcom, D. W., & See, M. T. (2010). Estimates of variance components for genetic correlations among swine estrus traits. JOURNAL OF ANIMAL SCIENCE, 88(9), 2913–2919. https://doi.org/10.2527/jas.2009-2639 Ashwell, M. S., Ceddia, R. P., House, R. L., Cassady, J. P., Eisen, E. J., Eling, T. E., … Odle, J. (2010). Trans-10, cis-12-conjugated linoleic acid alters hepatic gene expression in a polygenic obese line of mice displaying hepatic lipidosis. JOURNAL OF NUTRITIONAL BIOCHEMISTRY, 21(9), 848–855. https://doi.org/10.1016/j.jnutbio.2009.06.013 Velie, B. D., Maltecca, C., & Cassady, J. P. (2009). Genetic relationships among pig behavior, growth, backfat, and loin muscle area. JOURNAL OF ANIMAL SCIENCE, 87(9), 2767–2773. https://doi.org/10.2527/jas.2008-1328 Cassady, J. P. (2007). Evidence of phenotypic relationships among behavioral characteristics of individual pigs and performance. JOURNAL OF ANIMAL SCIENCE, 85(1), 218–224. https://doi.org/10.2527/jas.2006-310 Tsai, S., Cassady, J. P., Freking, B. A., Nonneman, D. J., Rohrer, G. A., & Piedrahita, J. A. (2006, August). Annotation of the Affymetrix(1) porcine genome microarray. ANIMAL GENETICS, Vol. 37, pp. 423–424. https://doi.org/10.1111/j.1365-2052.2006.01460.x Blowe, C. D., Boyette, K. E., Ashwell, M. S., Eisen, E. J., Robison, O. W., & Cassady, J. P. (2006). Characterization of a line of pigs previously selected for increased litter size for RBP4 and follistatin. JOURNAL OF ANIMAL BREEDING AND GENETICS, 123(6), 389–395. https://doi.org/10.1111/j.1439-0388.2006.00620.x Bender, J. M., See, M. T., Hanson, D. J., Lawrence, T. E., & Cassady, J. P. (2006). Correlated responses in growth, carcass, and meat quality traits to divergent selection for testosterone production in pigs. JOURNAL OF ANIMAL SCIENCE, 84(6), 1331–1337. https://doi.org/10.2527/2006.8461331x Tsai, S., Mir, B., Martin, A. C., Estrada, J. L., Bischoff, S. R., Hsieh, W. P., … Piedrahita, J. A. (2006). Detection of transcriptional difference of porcine imprinted genes using different microarray platforms. BMC Genomics, 7. Muncie, S. A., Cassady, J. P., & Ashwell, M. S. (2006). Refinement of quantitative trait loci on bovine chromosome 18 affecting health and reproduction in US Holsteins. ANIMAL GENETICS, 37(3), 273–275. https://doi.org/10.1111/j.1365-2052.2006.01425.x House, R. L., Cassady, J. P., Eisen, E. J., McIntosh, M. K., & Odle, J. (2005). [Review of Conjugated linoleic acid evokes de-lipidation through the regulation of genes controlling lipid metabolism in adipose and liver tissue]. OBESITY REVIEWS, 6(3), 247–258. https://doi.org/10.1111/j.1467-789X.2005.00198.x House, R. L., Cassady, J. P., Eisen, E. J., Eling, T. E., Collins, J. B., Grissom, S. F., & Odle, J. (2005). Functional genomic characterization of delipidation elicited by trans-10, cis-12-conjugated linoleic acid (t10c12-CLA) in a polygenic obese line of mice. PHYSIOLOGICAL GENOMICS, 21(3), 351–361. https://doi.org/10.1152/physiolgenomics.00244.2004 Van Vleck, L. D., & Cassady, J. P. (2005). Unexpected estimates of variance components with a true model containing genetic competition effects. Journal of Animal Science, 83(1), 68–74. https://doi.org/10.2527/2005.83168x Holl, J. W., Cassady, J. P., Pomp, D., & Johnson, R. K. (2004). A genome scan for quantitative trait loci and imprinted regions affecting reproduction in pigs. Journal of Animal Science, 82(12), 3421–3429. https://doi.org/10.2527/2004.82123421x Walker, S., Robison, O. W., Whisnant, C. S., & Cassady, J. P. (2004). Effect of divergent selection for testosterone production on testicular morphology and daily sperm production in boars. Journal of Animal Science, 82(8), 2259–2263. https://doi.org/10.2527/2004.8282259x Cassady, J. P., Robison, O. W., Johnson, R. K., Mabry, J. W., Christian, L. L., Tokach, M. D., … Goodwin, R. N. (2004). National fork producers council maternal line genetic evaluation: A comparison of growth and carcass traits in terminal progeny. Journal of Animal Science, 82(12), 3482–3485. https://doi.org/10.2527/2004.82123482x