Joseph P. Cassady Jiao, S., Maltecca, C., Gray, K. A., & Cassady, J. P. (2014). Feed intake, average daily gain, feed efficiency, and real-time ultrasound traits in Duroc pigs: I. Genetic parameter estimation and accuracy of genomic prediction. JOURNAL OF ANIMAL SCIENCE, 92(6), 2377–2386. https://doi.org/10.2527/jas.2013-7338 Jiao, S., maltecca, Gray, K. A., & Cassady, J. P. (2014). Feed intake, average daily gain, feed efficiency, and real-time ultrasound traits in Duroc pigs: II. Genomewide association. Journal of Animal Science, 92(7), 2846–2860. https://doi.org/10.2527/jas.2014-7337 Maltecca, C., Parker, K. L., & Cassady, J. P. (2012). Application of multiple shrinkage methods to genomic predictions. JOURNAL OF ANIMAL SCIENCE, 90(6), 1777–1787. https://doi.org/10.2527/jas.2011-4350 Dhakal, K., Maltecca, C., Cassady, J. P., Baloche, G., Williams, C. M., & Washburn, S. P. (2013). Calf birth weight, gestation length, calving ease, and neonatal calf mortality in Holstein, Jersey, and crossbred cows in a pasture system. JOURNAL OF DAIRY SCIENCE, 96(1), 690–698. https://doi.org/10.3168/jds.2012-5817 Ashwell, M. S., Gonda, M. G., Gray, K., Maltecca, C., Audrey T. O'Nan, Cassady, J. P., & Mente, P. L. (2013). Changes in chondrocyte gene expression following in vitro impaction of porcine articular cartilage in an impact injury model. JOURNAL OF ORTHOPAEDIC RESEARCH, 31(3), 385–391. https://doi.org/10.1002/jor.22239 Huang, Y., Maltecca, C., Cassady, J. P., Alexander, L. J., Snelling, W. M., & MacNeil, M. D. (2012). Effects of reduced panel, reference origin, and genetic relationship on imputation of genotypes in Hereford cattle. JOURNAL OF ANIMAL SCIENCE, 90(12), 4203–4208. https://doi.org/10.2527/jas.2011-4728 Velie, B. D., Cassady, J. P., & Whisnant, C. S. (2012). Endocrine response to acute stress in pigs with differing backtest scores. LIVESTOCK SCIENCE, 145(1-3), 140–144. https://doi.org/10.1016/j.livsci.2012.01.008 Gray, K. A., Maltecca, C., Bagnato, A., Dolezal, M., Rossoni, A., Samore, A. B., & Cassady, J. P. (2012). Estimates of marker effects for measures of milk flow in the Italian brown Swiss dairy cattle population. BMC VETERINARY RESEARCH, 8. https://doi.org/10.1186/1746-6148-8-199 Knauer, M. T., Cassady, J. P., Newcom, D. W., & See, M. T. (2012). Gilt development traits associated with genetic line, diet and fertility. LIVESTOCK SCIENCE, 148(1-2), 159–167. https://doi.org/10.1016/j.livsci.2012.05.024 Spake, J. R., Gray, K. A., & Cassady, J. P. (2012). Relationship between backtest and coping styles in pigs. APPLIED ANIMAL BEHAVIOUR SCIENCE, 140(3-4), 146–153. https://doi.org/10.1016/j.applanim.2012.06.007 Maltecca, C., Gray, K. A., Weigel, K. A., Cassady, J. P., & Ashwell, M. (2011). A genome-wide association study of direct gestation length in US Holstein and Italian Brown populations. ANIMAL GENETICS, 42(6), 585–591. https://doi.org/10.1111/j.1365-2052.2011.02188.x Yoder, C. L., Maltecca, C., Cassady, J. P., Flowers, W. L., Price, S., & See, M. T. (2011). Breed differences in pig temperament scores during a performance test and their phenotypic relationship with performance. LIVESTOCK SCIENCE, 136(2-3), 93–101. https://doi.org/10.1016/j.livsci.2010.08.004 Gray, K. A., Smith, T., Maltecca, C., Overton, P., Parish, J. A., & Cassady, J. P. (2011). Differences in hair coat shedding, and effects on calf weaning weight and BCS among Angus dams. LIVESTOCK SCIENCE, 140(1-3), 68–71. https://doi.org/10.1016/j.livsci.2011.02.009 Fix, J. S., Cassady, J. P., Holl, J. W., Herring, W. O., Culbertson, M. S., & See, M. T. (2010). Effect of piglet birth weight on survival and quality of commercial market swine. LIVESTOCK SCIENCE, 132(1-3), 98–106. https://doi.org/10.1016/j.livsci.2010.05.007 Knauer, M. T., Cassady, J. P., Newcom, D. W., & See, M. T. (2010). Estimates of variance components for genetic correlations among swine estrus traits. JOURNAL OF ANIMAL SCIENCE, 88(9), 2913–2919. https://doi.org/10.2527/jas.2009-2639 Knauer, M. T., Cassady, J. P., Newcom, D. W., & See, M. T. (2011). Phenotypic and genetic correlations between gilt estrus, puberty, growth, composition, and structural conformation traits with first-litter reproductive measures. JOURNAL OF ANIMAL SCIENCE, 89(4), 935–942. https://doi.org/10.2527/jas.2009-2673 Fix, J. S., Cassady, J. P., Heugten, E., Hanson, D. J., & See, M. T. (2010). Differences in lean growth performance of pigs sampled from 1980 and 2005 commercial swine fed 1980 and 2005 representative feeding programs. LIVESTOCK SCIENCE, 128(1-3), 108–114. https://doi.org/10.1016/j.livsci.2009.11.006 Fix, J. S., Cassady, J. P., Herring, W. O., Holl, J. W., Culbertson, M. S., & See, M. T. (2010). Effect of piglet birth weight on body weight, growth, backfat, and longissimus muscle area of commercial market swine. LIVESTOCK SCIENCE, 127(1), 51–59. https://doi.org/10.1016/j.livsci.2009.08.007 Velie, B. D., Maltecca, C., & Cassady, J. P. (2009). Genetic relationships among pig behavior, growth, backfat, and loin muscle area. JOURNAL OF ANIMAL SCIENCE, 87(9), 2767–2773. https://doi.org/10.2527/jas.2008-1328 Ashwell, M. S., Ceddia, R. P., House, R. L., Cassady, J. P., Eisen, E. J., Eling, T. E., … Odle, J. (2010). Trans-10, cis-12-conjugated linoleic acid alters hepatic gene expression in a polygenic obese line of mice displaying hepatic lipidosis. JOURNAL OF NUTRITIONAL BIOCHEMISTRY, 21(9), 848–855. https://doi.org/10.1016/j.jnutbio.2009.06.013 Tsai, S., Cassady, J. P., Freking, B. A., Nonneman, D. J., Rohrer, G. A., & Piedrahita, J. A. (2006, August). Annotation of the Affymetrix(1) porcine genome microarray. ANIMAL GENETICS, Vol. 37, pp. 423–424. https://doi.org/10.1111/j.1365-2052.2006.01460.x Blowe, C. D., Boyette, K. E., Ashwell, M. S., Eisen, E. J., Robison, O. W., & Cassady, J. P. (2006). Characterization of a line of pigs previously selected for increased litter size for RBP4 and follistatin. JOURNAL OF ANIMAL BREEDING AND GENETICS, 123(6), 389–395. https://doi.org/10.1111/j.1439-0388.2006.00620.x Bender, J. M., See, M. T., Hanson, D. J., Lawrence, T. E., & Cassady, J. P. (2006). Correlated responses in growth, carcass, and meat quality traits to divergent selection for testosterone production in pigs. JOURNAL OF ANIMAL SCIENCE, 84(6), 1331–1337. https://doi.org/10.2527/2006.8461331x Tsai, S., Mir, B., Martin, A. C., Estrada, J. L., Bischoff, S. R., Hsieh, W. P., … Piedrahita, J. A. (2006). Detection of transcriptional difference of porcine imprinted genes using different microarray platforms. BMC Genomics, 7. Cassady, J. P. (2007). Evidence of phenotypic relationships among behavioral characteristics of individual pigs and performance. JOURNAL OF ANIMAL SCIENCE, 85(1), 218–224. https://doi.org/10.2527/jas.2006-310 Muncie, S. A., Cassady, J. P., & Ashwell, M. S. (2006). Refinement of quantitative trait loci on bovine chromosome 18 affecting health and reproduction in US Holsteins. ANIMAL GENETICS, 37(3), 273–275. https://doi.org/10.1111/j.1365-2052.2006.01425.x House, R. L., Cassady, J. P., Eisen, E. J., McIntosh, M. K., & Odle, J. (2005). [Review of Conjugated linoleic acid evokes de-lipidation through the regulation of genes controlling lipid metabolism in adipose and liver tissue]. OBESITY REVIEWS, 6(3), 247–258. https://doi.org/10.1111/j.1467-789X.2005.00198.x House, R. L., Cassady, J. P., Eisen, E. J., Eling, T. E., Collins, J. B., Grissom, S. F., & Odle, J. (2005). Functional genomic characterization of delipidation elicited by trans-10, cis-12-conjugated linoleic acid (t10c12-CLA) in a polygenic obese line of mice. PHYSIOLOGICAL GENOMICS, 21(3), 351–361. https://doi.org/10.1152/physiolgenomics.00244.2004 Van Vleck, L. D., & Cassady, J. P. (2005). Unexpected estimates of variance components with a true model containing genetic competition effects. Journal of Animal Science, 83(1), 68–74. https://doi.org/10.2527/2005.83168x Holl, J. W., Cassady, J. P., Pomp, D., & Johnson, R. K. (2004). A genome scan for quantitative trait loci and imprinted regions affecting reproduction in pigs. Journal of Animal Science, 82(12), 3421–3429. https://doi.org/10.2527/2004.82123421x Walker, S., Robison, O. W., Whisnant, C. S., & Cassady, J. P. (2004). Effect of divergent selection for testosterone production on testicular morphology and daily sperm production in boars. Journal of Animal Science, 82(8), 2259–2263. https://doi.org/10.2527/2004.8282259x Cassady, J. P., Robison, O. W., Johnson, R. K., Mabry, J. W., Christian, L. L., Tokach, M. D., … Goodwin, R. N. (2004). National fork producers council maternal line genetic evaluation: A comparison of growth and carcass traits in terminal progeny. Journal of Animal Science, 82(12), 3482–3485. https://doi.org/10.2527/2004.82123482x