James Ryan Crosby

College of Engineering

Works (13)

Updated: August 29th, 2023 05:00

2023 article

Complete Genome Sequences of Caldicellulosiruptor acetigenus DSM 7040, Caldicellulosiruptor morganii DSM 8990 (RT8.B8), and Caldicellulosiruptor naganoensis DSM 8991 (NA10)

Bing, R. G. G., Willard, D. J. J., Manesh, M. J. H., Laemthong, T., Crosby, J. R. R., Adams, M. W. W., & Kelly, R. M. M. (2023, February 1). MICROBIOLOGY RESOURCE ANNOUNCEMENTS, Vol. 2.

By: R. Bing n, D. Willard n, M. Manesh n, T. Laemthong n, J. Crosby n, M. Adams*, R. Kelly n

Sources: Web Of Science, ORCID
Added: February 20, 2023

2023 journal article

Complete Genome Sequences of Two Thermophilic Indigenous Bacteria Isolated from Wheat Straw, Thermoclostridium stercorarium subsp. Strain RKWS1 and Thermoanaerobacter sp. Strain RKWS2

MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 12(3).

By: R. Bing n, D. Willard n, M. Manesh n, T. Laemthong n, J. Crosby n, M. Adams*, R. Kelly n

Sources: Web Of Science, ORCID
Added: April 17, 2023

2023 journal article

Fermentative conversion of unpretreated plant biomass: A thermophilic threshold for indigenous microbial growth

BIORESOURCE TECHNOLOGY, 367.

By: R. Bing n, M. Carey n, T. Laemthong n, D. Willard n, J. Crosby n, D. Sulis n, J. Wang n, M. Adams*, R. Kelly n

author keywords: Thermophiles; Lignocellulose; Consolidated bioprocessing; Caldicellulosiruptor bescii; Acetivibrio thermocellus
MeSH headings : Biomass; Fermentation; Lignin / chemistry; Clostridium thermocellum / metabolism; Plants / metabolism
Sources: Web Of Science, ORCID
Added: January 17, 2023

2023 journal article

Role of cell-substrate association during plant biomass solubilization by the extreme thermophile Caldicellulosiruptor bescii

EXTREMOPHILES, 27(1).

By: T. Laemthong n, R. Bing n, J. Crosby n, M. Manesh n, M. Adams* & R. Kelly n

author keywords: Caldicellulosiruptor; Extreme thermophile; Lignocellulose; Binding proteins; Tapirins
MeSH headings : Cellulose / metabolism; Biomass; Saccharum / metabolism; Caldicellulosiruptor / metabolism; Clostridiales / metabolism; Plants; Archaea / metabolism
Sources: Web Of Science, ORCID
Added: March 13, 2023

2023 journal article

Whither the genus Caldicellulosiruptor and the order Thermoanaerobacterales: phylogeny, taxonomy, ecology, and phenotype

FRONTIERS IN MICROBIOLOGY, 14.

By: R. Bing n, D. Willard n, J. Crosby n, M. Adams* & R. Kelly n

author keywords: Caldicellulosiruptor; Thermoanaerobacterales; bacteria; thermophiles; phylogeny; ecology; fermentative anaerobes
Sources: Web Of Science, ORCID
Added: August 28, 2023

2022 article

Biochemical and Regulatory Analyses of Xylanolytic Regulons in Caldicellulosiruptor bescii Reveal Genus-Wide Features of Hemicellulose Utilization

Crosby, J. R., Laemthong, T., Bing, R. G., Zhang, K., Tanwee, T. N. N., Lipscomb, G. L., … Kelly, R. M. (2022, October 11). APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Vol. 10.

By: J. Crosby n, T. Laemthong n, R. Bing n, K. Zhang*, T. Tanwee*, G. Lipscomb*, D. Rodionov*, Y. Zhang*, M. Adams*, R. Kelly n

author keywords: Caldicellulosiruptor; extreme thermophile; hemicellulose; xylanases; hemicellulase
MeSH headings : Regulon; Xylans; Cellulose / metabolism; Clostridiales / metabolism; Sugars
Sources: Web Of Science, ORCID
Added: October 24, 2022

2022 article

Engineering Caldicellulosiruptor bescii with Surface Layer Homology Domain-Linked Glycoside Hydrolases Improves Plant Biomass Solubilization

Laemthong, T., Bing, R. G., Crosby, J. R., Adams, M. W. W., & Kelly, R. M. (2022, September 28). APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Vol. 9.

By: T. Laemthong n, R. Bing n, J. Crosby n, M. Adams* & R. Kelly n

author keywords: Caldicellulosiruptor; lignocellulose; glycoside hydrolase; surface layer homology (SLH) domain; plant biomass degradation; surface layer homology domain
MeSH headings : Glycoside Hydrolases / metabolism; Biomass; Xylans / metabolism; Xylose; Clostridiales / metabolism; Cellulose / metabolism; Plants / microbiology; Populus
Sources: Web Of Science, ORCID
Added: October 11, 2022

2021 journal article

Genome-Scale Metabolic Model of Caldicellulosiruptor bescii Reveals Optimal Metabolic Engineering Strategies for Bio-based Chemical Production

MSystems, 6(3).

By: D. Rodionov*, I. Rodionova, V. Rodionov, A. Arzamasov, K. Zhang*, G. Rubinstein*, T. Tanwee*, R. Bing n ...

Ed(s): Z. Summers

author keywords: Caldicellulosiruptor bescii; lignocellulose degradation; carbohydrate; Caldicellulosiruptor; carbohydrate utilization; comparative genomics; metabolic reconstruction; plant biomass degradation; regulon
Sources: Web Of Science, Crossref, ORCID
Added: July 14, 2021

2020 article

The biology and biotechnology of the genus Caldicellulosiruptor: recent developments in 'Caldi World'

Lee, L. L., Crosby, J. R., Rubinstein, G. M., Laemthong, T., Bing, R. G., Straub, C. T., … Kelly, R. M. (2020, January). EXTREMOPHILES, Vol. 24, pp. 1–15.

By: L. Lee n, J. Crosby n, G. Rubinstein*, T. Laemthong n, R. Bing n, C. Straub n, M. Adams*, R. Kelly n

author keywords: Caldicellulosiruptor; Extreme thermophiles; Lignocellulose
MeSH headings : Biomass; Biotechnology; Clostridiales; Glycoside Hydrolases; Hot Springs
Sources: Web Of Science, ORCID
Added: February 27, 2020

2019 journal article

Extreme thermophiles as emerging metabolic engineering platforms

Current Opinion in Biotechnology, 59, 55–64.

By: J. Crosby n, T. Laemthong n, A. Lewis n, C. Straub n, M. Adams* & R. Kelly n

MeSH headings : Archaea; Biotechnology; Genetic Engineering; Metabolic Engineering; Waste Products
Sources: Web Of Science, Crossref, ORCID
Added: November 25, 2019

2018 review

Biotechnology of extremely thermophilic archaea

[Review of ]. FEMS MICROBIOLOGY REVIEWS, 42(5), 543–578.

By: C. Straub n, J. Counts n, D. Nguyen*, C. Wu*, B. Zeldes n, J. Crosby n, J. Conway n, J. Otten n ...

author keywords: extremely thermophilic archaea; biotechnology; biocatalysis; biooxidation
MeSH headings : Archaea / genetics; Archaea / physiology; Biotechnology / trends; Hot Temperature; Industrial Microbiology / trends; Metabolic Engineering / trends
Sources: Web Of Science, ORCID
Added: November 19, 2018

2018 journal article

Novel multidomain, multifunctional glycoside hydrolases from highly lignocellulolytic Caldicellulosiruptor species

AICHE JOURNAL, 64(12), 4218–4228.

By: J. Conway n, J. Crosby n, A. Hren n, R. Southerland n, L. Lee n, V. Lunin*, P. Alahuhta*, M. Himmel* ...

author keywords: Caldicellulosiruptor; lignocellulose; glycoside hydrolase; cellulase
Sources: Web Of Science, ORCID
Added: November 26, 2018

2018 journal article

Parsing in vivo and in vitro contributions to microcrystalline cellulose hydrolysis by multidomain glycoside hydrolases in the Caldicellulosiruptor bescii secretome

BIOTECHNOLOGY AND BIOENGINEERING, 115(10), 2426–2440.

By: J. Conway n, J. Crosby n, B. McKinley n, N. Seals n, M. Adams* & R. Kelly n

author keywords: Caldicellulosiruptor berci; cellulase; extreme thermophile; glycoside hydrolase; lignocellulose; secretome
MeSH headings : Cellulose / chemistry; Cellulose / metabolism; Firmicutes / enzymology; Firmicutes / genetics; Glycoside Hydrolases / chemistry; Glycoside Hydrolases / genetics; Glycoside Hydrolases / metabolism; Hydrolysis
Sources: Web Of Science, ORCID
Added: October 29, 2018