@article{chen_song_williams_shuford_liu_wang_li_shi_gokce_ducoste_et al._2013, title={Monolignol Pathway 4-Coumaric Acid: Coenzyme A Ligases in Populus trichocarpa: Novel Specificity, Metabolic Regulation, and Simulation of Coenzyme A Ligation Fluxes}, volume={161}, ISSN={["0032-0889"]}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-84874626790&partnerID=MN8TOARS}, DOI={10.1104/pp.112.210971}, abstractNote={Abstract}, number={3}, journal={PLANT PHYSIOLOGY}, author={Chen, Hsi-Chuan and Song, Jina and Williams, Cranos M. and Shuford, Christopher M. and Liu, Jie and Wang, Jack P. and Li, Quanzi and Shi, Rui and Gokce, Emine and Ducoste, Joel and et al.}, year={2013}, month={Mar}, pages={1501–1516} }
 @article{schmidt_schwartzberg_perera_weber-bargioni_carroll_sarkar_bosneaga_urban_song_balakshin_et al._2009, title={Label-free in situ imaging of lignification in the cell wall of low lignin transgenic Populus trichocarpa}, volume={230}, ISSN={["1432-2048"]}, DOI={10.1007/s00425-009-0963-x}, abstractNote={Chemical imaging by confocal Raman microscopy has been used for the visualization of the cellulose and lignin distribution in wood cell walls. Lignin reduction in wood can be achieved by, for example, transgenic suppression of a monolignol biosynthesis gene encoding 4-coumarate-CoA ligase (4CL). Here, we use confocal Raman microscopy to compare lignification in wild type and lignin-reduced 4CL transgenic Populus trichocarpa stem wood with spatial resolution that is sub-μm. Analyzing the lignin Raman bands in the spectral region between 1,600 and 1,700 cm−1, differences in lignin signal intensity and localization are mapped in situ. Transgenic reduction of lignin is particularly pronounced in the S2 wall layer of fibers, suggesting that such transgenic approach may help overcome cell wall recalcitrance to wood saccharification. Spatial heterogeneity in the lignin composition, in particular with regard to ethylenic residues, is observed in both samples.}, number={3}, journal={PLANTA}, author={Schmidt, M. and Schwartzberg, A. M. and Perera, P. N. and Weber-Bargioni, A. and Carroll, A. and Sarkar, P. and Bosneaga, E. and Urban, J. J. and Song, J. and Balakshin, M. Y. and et al.}, year={2009}, month={Aug}, pages={589–597} }
 @article{song_lu_chen_lourenco_chiang_2006, title={Genetic transformation of Populus trichocarpa genotype Nisqually-1: A functional genomic tool for woody plants}, volume={47}, ISSN={["1471-9053"]}, DOI={10.1093/pcp/pcl018}, abstractNote={We report here the Agrobacterium-mediated genetic transformation of Nisqually-1, a Populus trichocarpa genotype whose genome was recently sequenced. Several systems were established. Internodal stem segments from vigorously growing greenhouse plants are the explants most amenable to transformation. For the most efficient system, approximately 40% of the stem segments infected with pBI121-containing Agrobacterium tumefaciens C58 produced transgenic calli, as confirmed by beta-glucuronidase (GUS) staining. The regeneration efficiency of independent transgenic plants was approximately 13%, as revealed by genomic Southern analysis. Some transgenic plants were produced in as little as 5 months after co-cultivation. This system may help to facilitate studies of gene functions in tree growth and development at a genome level.}, number={11}, journal={PLANT AND CELL PHYSIOLOGY}, author={Song, Jingyuan and Lu, Shanfa and Chen, Zenn-Zong and Lourenco, Rodrigo and Chiang, Vincent L.}, year={2006}, month={Nov}, pages={1582–1589} }