Kyle John Tomek

Works (4)

Updated: March 5th, 2026 14:45

2025 article

BPS2025 - Advanced deep learning model to predict DNA-DNA binding interactions

Matange, K. R., Brihadiswaran, G., Tomek, K. J., Tuck, J. M., & Keung, A. J. (2025, February 1). Biophysical Journal, Vol. 2.

By: K. Matange n, G. Brihadiswaran n, K. Tomek n, J. Tuck n  & A. Keung n 

topics (OpenAlex): Computational Drug Discovery Methods
Sources: NC State University Libraries, NC State University Libraries
Added: March 4, 2026

2022 article

DINOS: Data INspired Oligo Synthesis for DNA Data Storage

Volkel, K., Tomek, K. J., Keung, A. J., & Tuck, J. M. (2022, March 23). ACM Journal on Emerging Technologies in Computing Systems, Vol. 3, p. [""].

By: K. Volkel n, K. Tomek n, A. Keung n  & J. Tuck n 

author keywords: DNA information storage; DNA synthesis; DNA assembly algorithms
topics (OpenAlex): Advanced biosensing and bioanalysis techniques; DNA and Biological Computing; Modular Robots and Swarm Intelligence
TL;DR: The approach offers greater density by up to 80% over a prior general purpose gene assembly technique, and in an analysis of synthesis costs, it is estimated that DINOS is as 105× cheaper than de novo synthesis. (via Semantic Scholar)
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Sources: Web Of Science, ORCID, NC State University Libraries
Added: April 14, 2022

2021 article

Promiscuous molecules for smarter file operations in DNA-based data storage

Tomek, K. J., Volkel, K., Indermaur, E. W., Tuck, J. M., & Keung, A. J. (2021, June 10). Nature Communications, Vol. 6.

By: K. Tomek n, K. Volkel n, E. Indermaur n, J. Tuck n  & A. Keung n 

MeSH headings : Computer Simulation; DNA / chemistry; DNA Primers / chemistry; Databases, Nucleic Acid; High-Throughput Nucleotide Sequencing; Image Processing, Computer-Assisted / methods; Information Storage and Retrieval / methods; Real-Time Polymerase Chain Reaction / methods; Software; Temperature; Thermodynamics
topics (OpenAlex): DNA and Biological Computing; Advanced biosensing and bioanalysis techniques; Biosensors and Analytical Detection
TL;DR: The authors leverage thermodynamics to control the access of different subsets of data in a file and provide an argument for the substantial and practical economic benefit of this generalizable strategy to organize data. (via Semantic Scholar)
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Sources: Web Of Science, ORCID, NC State University Libraries
Added: July 12, 2021

2019 article

Driving the Scalability of DNA-Based Information Storage Systems

Tomek, K. J., Volkel, K., Simpson, A., Hass, A. G., Indermaur, E. W., Tuck, J. M., & Keung, A. J. (2019, May 22). ACS Synthetic Biology, Vol. 8, pp. 1241–1248.

By: K. Tomek n, K. Volkel  n, A. Simpson  n, A. Hass n, E. Indermaur n, J. Tuck n , A. Keung n 

author keywords: synthetic biology; DNA storage; information storage; nested architecture; file access; DNA sequencing
MeSH headings : DNA / chemistry; DNA / genetics; Databases, Nucleic Acid; High-Throughput Nucleotide Sequencing; Information Storage and Retrieval / methods; Sequence Analysis, DNA / methods; Synthetic Biology / methods
topics (OpenAlex): DNA and Biological Computing; Advanced biosensing and bioanalysis techniques; Modular Robots and Swarm Intelligence
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Sources: Web Of Science, NC State University Libraries, ORCID
Added: July 15, 2019

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