Works (396)

Updated: August 15th, 2023 21:15

2023 journal article

Development of a Versatile Method to Construct Direct Electron Transfer-Type Enzyme Complexes Employing SpyCatcher/SpyTag System

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 24(3).

By: T. Yanase n, J. Okuda-Shimazaki n, R. Asano*, K. Ikebukuro*, K. Sode n & W. Tsugawa*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: biosensors; direct electron transfer; SpyCatcher; SpyTag; glucose dehydrogenase; d-amino acid oxidase; l-lactate oxidase; biomedical engineering
MeSH headings : Flavin-Adenine Dinucleotide / metabolism; Electrons; Glucose 1-Dehydrogenase / metabolism; Proteins / metabolism; Oxidation-Reduction
Sources: ORCID, Web Of Science
Added: January 18, 2023

2023 journal article

Development of an Anti-Idiotype Aptamer-Based Electrochemical Sensor for a Humanized Therapeutic Antibody Monitoring

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 24(6).

By: M. Nagata n, J. Lee n, T. Saito*, K. Ikebukuro* & K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: aptamers; bevacizumab; biosensors; therapeutic monoclonal antibody; point-of-care testing
MeSH headings : Bevacizumab; Aptamers, Nucleotide / metabolism; Antibodies, Monoclonal; Oxidation-Reduction; Electrochemical Techniques / methods; Biosensing Techniques / methods
Sources: ORCID, Web Of Science
Added: March 11, 2023

2023 journal article

Surface area independent response of closed bipolar electrodes

Sensors and Actuators Reports.

By: D. Probst n, I. Lee n, J. Dick* & K. Sode n

co-author countries: United States of America 🇺🇸
Source: ORCID
Added: January 3, 2023

2022 journal article

A Thiol-reactive Phenazine Ethosulfate - A Novel Redox Mediator for Quasi-direct Electron-transfer-type Sensors

SENSORS AND MATERIALS, 34(6), 2105–2124.

By: M. Fitriana, K. Hiraka, K. Ikebukuro, K. Sode* & W. Tsugawa

author keywords: thiol-reactive phenazine ethosulfate; quasi-direct electron transfer; redox probe; enzyme modification; lactate oxidase; electrochemical enzyme sensor; biomedical engineering
Sources: Web Of Science, ORCID
Added: June 27, 2022

2022 journal article

An Amine-Reactive Phenazine Ethosulfate (arPES)-A Novel Redox Probe for Electrochemical Aptamer-Based Sensor

SENSORS, 22(5).

By: M. Nagata n, J. Lee n, S. Henley n, K. Ikebukuro* & K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: aptamer; redox probe; amine-reactive phenazine ethosulfate; electrochemical sensor
Sources: ORCID, Web Of Science
Added: February 25, 2022

2022 journal article

Clinical Study of a High Accuracy Green Design Blood Glucose Monitor Using an Innovative Optical Transmission Absorbance System

JOURNAL OF DIABETES SCIENCE AND TECHNOLOGY, 16(5), 1069–1075.

By: T. Moriuchi*, Y. Otaki*, H. Satou*, F. Chai*, Y. Hayashida*, R. Aikawa*, T. Sugiyama*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: accuracy; blood glucose monitoring; green design; green diabetes initiative; optical BGM
MeSH headings : Blood Glucose; Blood Glucose Self-Monitoring; Data Collection; Diabetes Mellitus, Type 2; Humans; Hyperglycemia
Sources: Web Of Science, ORCID
Added: January 30, 2023

2022 journal article

Development of a DNA aptamer that binds to the complementarity-determining region of therapeutic monoclonal antibody and affinity improvement induced by pH-change for sensitive detection

BIOSENSORS & BIOELECTRONICS, 203.

By: T. Saito*, Y. Shimizu*, K. Tsukakoshi*, K. Abe*, J. Lee n, K. Ueno*, R. Asano*, B. Jones* ...

co-author countries: United Kingdom of Great Britain and Northern Ireland 🇬🇧 Japan 🇯🇵 United States of America 🇺🇸
author keywords: DNA aptamer; Therapeutic antibody; Antibody-aptamer complex; Affinity improvement; Electrochemical biosensor
MeSH headings : Antibodies, Monoclonal; Antibody Affinity; Aptamers, Nucleotide / chemistry; Biosensing Techniques; Complementarity Determining Regions / chemistry; Complementarity Determining Regions / genetics; Humans; Hydrogen-Ion Concentration
Sources: Web Of Science, ORCID
Added: July 11, 2022

2022 journal article

Development of a POCT type insulin sensor employing anti-insulin single chain variable fragment based on faradaic electrochemical impedance spectroscopy under single frequency measurement

Biosensors and Bioelectronics, 200, 113901.

By: M. Khanwalker n, R. Fujita*, J. Lee n, E. Wilson n, K. Ito*, R. Asano*, K. Ikebukuro*, J. LaBelle*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: Insulin; Single chain variable fragment (scFv); Faradaic electrochemical impedance; spectroscopy; Point-of-care testing (POCT) sensor; Single frequency measurement
MeSH headings : Biosensing Techniques; Dielectric Spectroscopy; Electrochemical Techniques; Electrodes; Insulin; Point-of-Care Testing; Single-Chain Antibodies
Source: ORCID
Added: December 21, 2021

2022 journal article

Development of an electrochemical impedance spectroscopy based biosensor for detection of ubiquitin C-Terminal hydrolase L1

BIOSENSORS & BIOELECTRONICS, 208.

By: J. Lee n, B. Kane n, M. Khanwalker n & K. Sode n

co-author countries: United States of America 🇺🇸
author keywords: Traumatic brain injury; Ubiquitin C-Terminal hydrolase L1 (UCH-L1); Electrochemical impedance spectroscopy; Point-of-care testing; Immunosensor
MeSH headings : Biomarkers; Biosensing Techniques; Brain Injuries, Traumatic / diagnosis; Dielectric Spectroscopy; Humans; Ubiquitin Thiolesterase
Sources: ORCID, Web Of Science
Added: March 30, 2022

2022 journal article

In Vitro Continuous 3 Months Operation of Direct Electron Transfer Type Open Circuit Potential Based Glucose Sensor: Heralding the Next CGM Sensor

JOURNAL OF DIABETES SCIENCE AND TECHNOLOGY, 16(5), 1107–1113.

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: FADGDH; direct electron transfer (DET); 3(rd) generation glucose sensor; continuous glucose monitoring (CGM); Open circuit potential (OCP); long-term operation
MeSH headings : Humans; Biosensing Techniques / methods; Blood Glucose; Blood Glucose Self-Monitoring; Electrodes; Electrons; Flavin-Adenine Dinucleotide; Glucose; Gold
Sources: ORCID, Web Of Science
Added: April 27, 2022

2022 journal article

In Vitro Evaluation of Miniaturized Amperometric Enzyme Sensor Based on the Direct Electron Transfer Principle for Continuous Glucose Monitoring

Journal of Diabetes Science and Technology, 1, 193229682110706.

By: Y. Inoue*, Y. Kusaka*, K. Shinozaki*, I. Lee n & K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: FADGDH; direct electron transfer (DET); third-generation glucose sensor; continuous glucose monitoring (CGM)
MeSH headings : Humans; Acetaminophen; Biosensing Techniques / methods; Blood Glucose; Blood Glucose Self-Monitoring / methods; Electrodes; Electrons; Glucose; Glucose 1-Dehydrogenase
Source: ORCID
Added: January 7, 2022

2022 journal article

Light-induced production of isobutanol and 3-methyl-1-butanol by metabolically engineered cyanobacteria

MICROBIAL CELL FACTORIES, 21(1).

By: S. Kobayashi*, S. Atsumi*, K. Ikebukuro*, K. Sode n & R. Asano*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: Biofuel; CcaS/CcaR two-component system; Cyanobacteria; Isobutanol; Light-regulated gene expression; Metabolic regulation; Synechocystis sp. PCC 6803; 3-methyl-1-butanol
MeSH headings : Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Butanols / metabolism; Light; Metabolic Engineering; Pentanols / metabolism; Photoreceptors, Microbial / genetics; Photoreceptors, Microbial / metabolism; Photosynthesis; Promoter Regions, Genetic; Synechocystis / genetics; Synechocystis / growth & development; Synechocystis / metabolism
Sources: Web Of Science, ORCID
Added: January 18, 2022

2022 journal article

Microgravity environment grown crystal structure information based engineering of direct electron transfer type glucose dehydrogenase

COMMUNICATIONS BIOLOGY, 5(1).

By: J. Okuda-Shimazaki n, H. Yoshida*, I. Lee n, K. Kojima*, N. Suzuki*, W. Tsugawa*, M. Yamada*, K. Inaka*, H. Tanaka*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
MeSH headings : Glucose 1-Dehydrogenase; Blood Glucose Self-Monitoring; Electrons; Blood Glucose
Sources: ORCID, Web Of Science
Added: December 7, 2022

2022 journal article

Structure of lactate oxidase from Enterococcus hirae revealed new aspects of active site loop function: Product-inhibition mechanism and oxygen gatekeeper

PROTEIN SCIENCE, 31(10).

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: crystal structure; dehydrogenase; flavin; lactate oxidase; lactate sensor; l-lactate; oxidase; oxygen; product inhibition; substrate inhibition
MeSH headings : Catalytic Domain; Enterococcus hirae / metabolism; Flavin Mononucleotide / chemistry; Kinetics; Lactates; Ligands; Mixed Function Oxygenases / chemistry; Oxygen; Pyruvic Acid; Triose-Phosphate Isomerase / metabolism
Sources: ORCID, Web Of Science
Added: September 22, 2022

2022 journal article

Transient potentiometry based d-serine sensor using engineered d-amino acid oxidase showing quasi-direct electron transfer property

Biosensors and Bioelectronics, 200, 113927.

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: D-Serine; Transient potentiometry; Open circuit potential; D-Amino acid Oxidase; Direct electron transfer
MeSH headings : Biosensing Techniques; Electrons; Flavin-Adenine Dinucleotide; Glucose; Glucose 1-Dehydrogenase; Potentiometry; Serine
Source: ORCID
Added: December 30, 2021

2021 journal article

A Green Light-Regulated T7 RNA Polymerase Gene Expression System for Cyanobacteria

Marine Biotechnology, 23(1), 31–38.

By: C. Shono*, D. Ariyanti*, K. Abe*, Y. Sakai*, I. Sakamoto*, K. Tsukakoshi*, K. Sode n, K. Ikebukuro*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: T7 RNA polymerase; Green light-regulated gene expression system; Light-regulated bioprocesses; CcaS; CcaR; Synechocystissp; PCC6803; Cyanobacteria
MeSH headings : Bacterial Proteins; DNA-Directed RNA Polymerases; Gene Expression; Gene Expression Regulation, Bacterial / radiation effects; Genes, Reporter; Green Fluorescent Proteins / genetics; Light; Plasmids; Promoter Regions, Genetic; Synechocystis / genetics; Synechocystis / radiation effects; Viral Proteins
Source: ORCID
Added: October 9, 2020

2021 journal article

A self-powered glucose sensor based on BioCapacitor principle with micro-sized enzyme anode employing direct electron transfer type FADGDH

JOURNAL OF PHYSICS-ENERGY, 3(3).

By: I. Lee n, J. Okuda-Shimazaki n, W. Tsugawa*, K. Ikebukuro* & K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: micro-sized electrode; biofuel cell; BioCapacitor; self-powered; glucose sensor; implantable artificial pancreas; direct electron transfer
Sources: ORCID, Web Of Science
Added: March 14, 2021

2021 journal article

Artificial complementary chromatic acclimation gene expression system in Escherichia coli

MICROBIAL CELL FACTORIES, 20(1).

By: D. Ariyanti*, K. Ikebukuro* & K. Sode n

co-author countries: Indonesia 🇮🇩 Japan 🇯🇵 United States of America 🇺🇸
author keywords: Artificial complementary chromatic acclimation; Gene expression system; CcaS; CcaR; Escherichia coli
MeSH headings : Escherichia coli / genetics; Escherichia coli / metabolism; Gene Expression; Gene Expression Regulation, Bacterial; Genes, Reporter; Light; Luminescent Proteins / genetics; Phycobilins / biosynthesis; Phycobilins / genetics; Phycocyanin / biosynthesis; Phycocyanin / genetics; Promoter Regions, Genetic; Synechocystis / genetics; Synechocystis / metabolism; Transcription, Genetic; Transformation, Bacterial
Sources: ORCID, Web Of Science
Added: July 6, 2021

2021 journal article

Continuous electrochemical monitoring of L-glutamine using redox-probe-modified L-glutamine-binding protein based on intermittent pulse amperometry

SENSORS AND ACTUATORS B-CHEMICAL, 346.

By: S. Takamatsu*, J. Lee n, R. Asano*, W. Tsugawa*, K. Ikebukuro* & K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: L-glutamine; Continuous monitoring; L-glutamine-binding protein; Intermittent pulse amperometry; Electrochemical; Conformation change
Sources: ORCID, Web Of Science
Added: August 5, 2021

2021 journal article

Continuous glucose monitoring systems-Current status and future perspectives of the flagship technologies in biosensor research

BIOSENSORS & BIOELECTRONICS, 181.

By: I. Lee n, D. Probst n, D. Klonoff* & K. Sode n

co-author countries: United States of America 🇺🇸
author keywords: Diabetes; Glucose sensor; Blood glucose monitoring; Continuous glucose monitoring; Artificial pancreas; Wearable biosensors; Green initiative
Sources: Web Of Science, ORCID
Added: May 24, 2021

2021 article

Data on G-quadruplex topology, and binding ability of G-quadruplex forming sequences found in the promoter region of biomarker proteins and those relations to the presence of nuclear localization signal in the proteins

Lee, J., Teramoto, K., Yokoyama, T., Ueno, K., Tsukakoshi, K., Sode, K., & Ikebukuro, K. (2021, June). DATA IN BRIEF, Vol. 36.

By: J. Lee n, K. Teramoto*, T. Yokoyama*, K. Ueno*, K. Tsukakoshi*, K. Sode n, K. Ikebukuro*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: G-quadruplex; Aptamer; Nuclear localization signal; Promoter region; Biomarker protein
Sources: Web Of Science, ORCID
Added: July 19, 2021

2021 journal article

Detection of Chloride Using Microelectrodes in Closed Bipolar Electrode Scheme

ECS Meeting Abstracts.

By: D. Probst, I. Lee, J. Dick & K. Sode*

Source: ORCID
Added: November 12, 2021

2021 journal article

Development of an Interdigitated Electrode-Based Disposable Enzyme Sensor Strip for Glycated Albumin Measurement

MOLECULES, 26(3).

By: M. Hatada n, N. Loew n, J. Okuda-Shimazaki n, M. Khanwalker n, W. Tsugawa*, A. Mulchandani*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: interdigitated electrode; glycated albumin; fructosyl amino acid oxidase; point of care testing; disposable enzyme sensor; diabetes mellitus
MeSH headings : Biosensing Techniques / instrumentation; Disposable Equipment; Electrodes; Enzymes / metabolism; Glycation End Products, Advanced; Reproducibility of Results; Serum Albumin / analysis; Glycated Serum Albumin
Sources: Web Of Science, ORCID
Added: March 1, 2021

2021 journal article

Development of glycated peptide enzyme sensor based flow injection analysis system for haemoglobin A1c monitoring using quasi-direct electron transfer type engineered fructosyl peptide oxidase

BIOSENSORS & BIOELECTRONICS, 177.

By: M. Hatada n, S. Saito*, S. Yonehara*, W. Tsugawa*, R. Asano*, K. Ikebukuro*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: Haemoglobin A1c; Glycated protein; Fructosyl peptide oxidase; Flow injection analysis; Quasi-direct electron transfer; 2.5th generation principle
MeSH headings : Ascomycota; Biosensing Techniques; Electrons; Flow Injection Analysis; Glycated Hemoglobin / analysis; Humans; Peptides
Sources: Web Of Science, ORCID
Added: March 15, 2021

2021 article

Editorial preface of the special issue on "the progress and perspectives of biosensing research in North America"

Li, C.-zhong, Liu, J., & Sode, K. (2021, December 15). BIOSENSORS & BIOELECTRONICS, Vol. 194.

By: C. Li*, J. Liu* & K. Sode n

co-author countries: Canada 🇨🇦 United States of America 🇺🇸
MeSH headings : Biosensing Techniques; North America
Sources: Web Of Science, ORCID
Added: October 4, 2021

2021 journal article

Electrochemical quantification of accelerated FADGDH rates in aqueous nanodroplets

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 118(25).

By: K. Vannoy*, I. Lee n, K. Sode n & J. Dick*

co-author countries: United States of America 🇺🇸
author keywords: nanoelectrochemistry; nanodroplet; enzymology; FADGDH; reaction acceleration
MeSH headings : Electrochemistry; Electrodes; Flavin-Adenine Dinucleotide; Glucose Dehydrogenases / metabolism; Nanoparticles / chemistry; Water / chemistry
Sources: ORCID, Web Of Science
Added: June 16, 2021

2021 journal article

Electrochemical quantification of accelerated FADGDH rates in aqueous nanodroplets

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 118(25).

By: K. Vannoy, I. Lee, K. Sode & J. Dick

author keywords: nanoelectrochemistry; nanodroplet; enzymology; FADGDH; reaction acceleration
MeSH headings : Adolescent; Humans; United States / epidemiology; Child; Young Adult; Adult; Suicide, Attempted; Suicidal Ideation; Information Sources; Suicide Prevention; Surveys and Questionnaires; Risk Factors
Sources: Web Of Science, ORCID
Added: August 2, 2021

2021 journal article

G-quadruplex-forming aptamer enhances the peroxidase activity of myoglobin against luminol

NUCLEIC ACIDS RESEARCH, 49(11), 6069–6081.

By: K. Tsukakoshi*, Y. Yamagishi*, M. Kanazashi*, K. Nakama*, D. Oshikawa*, N. Savory*, A. Matsugami*, F. Hayashi* ...

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
MeSH headings : Aptamers, Nucleotide / chemistry; Aptamers, Nucleotide / metabolism; Computer Simulation; G-Quadruplexes; Heme / metabolism; Luminescence; Luminol / chemistry; Luminol / metabolism; Myoglobin / metabolism; Nuclear Magnetic Resonance, Biomolecular; Peroxidase / metabolism; SELEX Aptamer Technique; Substrate Specificity
Sources: Web Of Science, ORCID
Added: July 26, 2021

2021 journal article

Rapid, convenient, and highly sensitive detection of human hemoglobin in serum using a high-affinity bivalent antibody-enzyme complex

TALANTA, 234.

By: D. Miura*, H. Kimura*, W. Tsugawa*, K. Ikebukuro*, K. Sode n & R. Asano*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: Bivalent antibody-enzyme complex; Catcher/tag system; Glucose dehydrogenase; Hemoglobin; Homogeneous electrochemical detection; Single-chain variable fragment
MeSH headings : ErbB Receptors; Hemoglobins; Humans; Single-Chain Antibodies
Sources: Web Of Science, ORCID
Added: September 7, 2021

2021 journal article

Rational design of direct electron transfer type L-lactate dehydrogenase for the development of multiplexed biosensor

BIOSENSORS & BIOELECTRONICS, 176.

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: L-lactate oxidase; Direct electron transfer; Fusion protein; Site-directed mutagenesis; Multiplexed biosensor; Biomedical engineering
MeSH headings : Biosensing Techniques; Blood Glucose; Blood Glucose Self-Monitoring; Electrodes; Electrons; Glucose; Glucose Oxidase; L-Lactate Dehydrogenase
Sources: Web Of Science, ORCID
Added: March 8, 2021

2021 journal article

Strategic design and improvement of the internal electron transfer of heme b domain-fused glucose dehydrogenase for use in direct electron transfer-type glucose sensors

BIOSENSORS & BIOELECTRONICS, 176.

By: K. Ito*, J. Okuda-Shimazaki n, K. Kojima*, K. Mori*, W. Tsugawa*, R. Asano*, K. Ikebukuro*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: Glucose dehydrogenase; Surface electrostatics; Direct electron transfer; Fusion protein; Docking simulation
MeSH headings : Biosensing Techniques; Blood Glucose; Blood Glucose Self-Monitoring; Electron Transport; Electrons; Flavin-Adenine Dinucleotide / metabolism; Glucose; Glucose 1-Dehydrogenase / metabolism; Heme; Saccharomycetales
Sources: Web Of Science, ORCID
Added: March 15, 2021

2020 journal article

(Keynote) Continuous Glucose Monitoring Systems - Current Status and Future Perspectives of the Flagship Technologies in Biosensor Research -

ECS Meeting Abstracts, MA2020-02(44), 2777–2777.

By: K. Sode n

co-author countries: United States of America 🇺🇸
Source: ORCID
Added: December 23, 2020

2020 review

Alteration of Electron Acceptor Preferences in the Oxidative Half-Reaction of Flavin-Dependent Oxidases and Dehydrogenases

[Review of ]. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 21(11).

By: K. Hiraka*, W. Tsugawa* & K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: oxidase; dehydrogenase; oxidative half-reaction; oxygen; electron acceptor; flavin adenine dinucleotide; flavin mononucleotide; oxygen accessible pathway; bioelectrochemistry; enzyme engineering
MeSH headings : Animals; Electron Transport; Flavins / chemistry; Flavins / metabolism; Flavoproteins / chemistry; Flavoproteins / metabolism; Humans; Oxidoreductases / chemistry; Oxidoreductases / metabolism; Oxygen / chemistry; Oxygen / metabolism
Sources: Web Of Science, ORCID
Added: July 20, 2020

2020 journal article

Application of a Glucose Dehydrogenase-Fused with Zinc Finger Protein to Label DNA Aptamers for the Electrochemical Detection of VEGF

SENSORS, 20(14).

By: J. Lee n, A. Tatsumi*, K. Tsukakoshi*, E. Wilson n, K. Abe*, K. Sode n, K. Ikebukuro*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: aptamer; labeling; enzyme; zinc finger protein; glucose dehydrogenase; electrochemical sensor; vascular endothelial growth factor
MeSH headings : Aptamers, Nucleotide; Biosensing Techniques; Electrochemical Techniques; Glucose 1-Dehydrogenase; Humans; Vascular Endothelial Growth Factor A / analysis; Zinc Fingers
Sources: Web Of Science, ORCID
Added: August 24, 2020

2020 journal article

Construction of Super-Stabilized Direct Electron Transfer Type Glucose Dehydrogenase for Long Term Continuous Glucose Sensing System

ECS Meeting Abstracts, MA2020-02(44), 2831–2831.

By: J. Shimazaki, H. Yoshida & K. Sode*

Source: ORCID
Added: December 23, 2020

2020 journal article

Creation of a novel DET type FAD glucose dehydrogenase harboring Escherichia coli derived cytochrome b562 as an electron transfer domain

Biochemical and Biophysical Research Communications, 530(1), 82–86.

By: T. Yanase*, J. Okuda-Shimazaki n, K. Mori*, K. Kojima*, W. Tsugawa* & K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: Fusion enzymes; Direct electron transfer; Enzyme electrode; 3rd generation glucose sensor; Cytochrome b(562); FAD-Dependent glucose dehydrogenase
MeSH headings : Botrytis / genetics; Botrytis / metabolism; Cytochrome b Group / genetics; Cytochrome b Group / metabolism; Electron Transport; Escherichia coli / genetics; Escherichia coli / metabolism; Escherichia coli Proteins / genetics; Escherichia coli Proteins / metabolism; Flavin-Adenine Dinucleotide / metabolism; Glucose 1-Dehydrogenase / genetics; Glucose 1-Dehydrogenase / metabolism; Protein Engineering; Recombinant Fusion Proteins / genetics; Recombinant Fusion Proteins / metabolism; Substrate Specificity
Source: ORCID
Added: October 9, 2020

2020 journal article

Development of Insulin Sensors Based on Faradaic and Non-Faradaic Electrochemical Impedance Spectroscopy Detection Principle Using Single Chain Antibody (scFv)

ECS Meeting Abstracts, MA2020-02(44), 2783–2783.

By: M. Khanwalker, J. Lee*, J. LaBelle*, C. Cook*, M. Caplan*, B. Morrow*, C. Beck*, R. Asano*, K. Ikebukuro*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
Source: ORCID
Added: December 23, 2020

2020 journal article

Development of an Electrochemical Biosensor of Ubiquitin C-Terminal Hydrolase L1 (UCH-L1) for the Assessment of Traumatic Brain Injury (TBI)

ECS Meeting Abstracts, MA2020-02(44), 2784–2784.

By: J. Lee, H. Hirano, W. Tsugawa & K. Sode*

Source: ORCID
Added: December 23, 2020

2020 journal article

Electrochemical Aptasensor Employing Enzyme-Aptamer One-to-One Complex Showing Quasi-Direct Electron Transfer Ability

ECS Meeting Abstracts, MA2020-02(44), 2834–2834.

By: Y. Hatano*, J. Lee*, S. Kim*, K. Ikebukuro*, R. Asano*, M. Gu*, K. Sode*

co-author countries: Japan 🇯🇵 Korea (Republic of) 🇰🇷 United States of America 🇺🇸
Source: ORCID
Added: December 23, 2020

2020 journal article

Engineered Glucose Oxidase Capable of Quasi-Direct Electron Transfer after a Quick-and-Easy Modification with a Mediator

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 21(3).

By: N. Suzuki*, J. Lee n, N. Loew n, Y. Takahashi-Inose*, J. Okuda-Shimazaki n, K. Kojima*, K. Mori*, W. Tsugawa*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: glucose oxidase; direct electron transfer; amine-reactive phenazine ethosulfate; glucose sensor; glycemic level monitoring
MeSH headings : Aspergillus niger / enzymology; Biosensing Techniques / methods; Blood Glucose / analysis; Electrochemical Techniques; Fungal Proteins / metabolism; Glucose / metabolism; Glucose Oxidase / genetics; Glucose Oxidase / metabolism; Phenazines / metabolism; Protein Engineering
Sources: Web Of Science, ORCID
Added: May 8, 2020

2020 journal article

FAD dependent glucose dehydrogenases - Discovery and engineering of representative glucose sensing enzymes -

BIOELECTROCHEMISTRY, 132.

By: J. Okuda-Shimazaki n, H. Yoshida* & K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: Flavin adenine dinucleotide (FAD); Glucose dehydrogenase; Glucose sensor; Diabetes; Direct electron transfer (DET); Glucose oxidase
MeSH headings : Electrons; Flavin-Adenine Dinucleotide / metabolism; Fungi / enzymology; Glucose / metabolism; Glucose 1-Dehydrogenase / metabolism; Protein Engineering
Sources: Web Of Science, ORCID
Added: March 30, 2020

2020 journal article

Rational engineering of Aerococcus viridans L-lactate oxidase for the mediator modification to achieve quasi-direct electron transfer type lactate sensor

BIOSENSORS & BIOELECTRONICS, 151.

By: K. Hiraka*, K. Kojima*, W. Tsugawa*, R. Asano*, K. Ikebukuro* & K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: L-lactate oxidase; Amine reactive phenazine ethosulfate; Site-directed mutagenesis; Amperometric L-lactate biosensor; Interference; Direct electron transfer
MeSH headings : Aerococcus / chemistry; Aerococcus / isolation & purification; Biosensing Techniques; Catalysis; Enzymes, Immobilized / chemistry; Glucose / chemistry; Humans; Lactic Acid / chemistry; Lactic Acid / isolation & purification; Mixed Function Oxygenases / chemistry; Oxidation-Reduction
Sources: Web Of Science, ORCID
Added: June 29, 2020

2020 journal article

The Abtamer: A Novel Antibody-Aptamer Conjugate for Electrochemical Biosensing Applications

ECS Meeting Abstracts, MA2020-02(44), 2835–2835.

By: E. Wilson, J. Lee, S. Henley, R. Asano, K. Ikebukuro & K. Sode*

Source: ORCID
Added: December 23, 2020

2020 journal article

The Continuous 3 Month Operation of Open Circuit Potential Based Glucose Sensor Employing Direct Electron Transfer Type Fad Dependent Glucose Dehydrogenase

ECS Meeting Abstracts, MA2020-02(44), 2779–2779.

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
Source: ORCID
Added: December 23, 2020

2019 journal article

Affinity sensor for haemoglobin A1c based on single-walled carbon nanotube field-effect transistor and fructosyl amino acid binding protein

BIOSENSORS & BIOELECTRONICS, 129, 254–259.

By: M. Hatada*, T. Tran*, W. Tsugawa*, K. Sode n & A. Mulchandani*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: M. Hatada*, T. Tran*, W. Tsugawa*, K. Sode n & A. Mulchandani*

author keywords: Single-walled carbon nanotube; Field-effect transistor; Haemoglobin A1c; Fructosyl amino acid binding protein; SocA; Fructosyl valine
MeSH headings : Agrobacterium tumefaciens / chemistry; Bacterial Proteins / chemistry; Biosensing Techniques / instrumentation; Biosensing Techniques / methods; Equipment Design; Glycated Hemoglobin / analysis; Humans; Nanotubes, Carbon / chemistry; Proteolysis; Transistors, Electronic; Valine / analogs & derivatives; Valine / analysis
Sources: Web Of Science, ORCID
Added: April 20, 2020

2019 journal article

Application of an engineered chromatic acclimation sensor for red-light-regulated gene expression in cyanobacteria

ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS, 44.

By: S. Kobayashi*, M. Nakajima*, R. Asano*, E. Ferreira*, K. Abe*, P. Tamagnini*, S. Atsumi*, K. Sode n

co-author countries: Japan 🇯🇵 Portugal 🇵🇹 United States of America 🇺🇸
author keywords: Cyanobacteria; Marine cyanobacterium; Chromatic acclimation sensor; CcaS/CcaR two-component system; Miniaturized CcaS; Red-light-regulated gene expression
Sources: Web Of Science, ORCID
Added: December 16, 2019

2019 journal article

Designer fungus FAD glucose dehydrogenase capable of direct electron transfer

BIOSENSORS & BIOELECTRONICS, 123, 114–123.

By: K. Ito*, J. Okuda-Shimazaki*, K. Mori*, K. Kojima*, W. Tsugawa*, K. Ikebukuro*, C. Lin*, J. La Belle*, H. Yoshida*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: K. Ito*, J. Okuda-Shimazaki*, K. Mori*, K. Kojima*, W. Tsugawa*, K. Ikebukuro*, C. Lin*, J. La Belle*, H. Yoshida*, K. Sode n

author keywords: Glucose dehydrogenase; Cellobiose dehydrogenase; Direct electron transfer; Designer FADGDH; Fusion protein; Heme b-binding cytochrome domain
MeSH headings : Aspergillus flavus / chemistry; Aspergillus flavus / enzymology; Biosensing Techniques; Blood Glucose / isolation & purification; Catalytic Domain; Electrodes; Electron Transport; Flavin-Adenine Dinucleotide / chemistry; Glucose Dehydrogenases / chemistry; Heme / chemistry
Sources: Web Of Science, ORCID
Added: April 20, 2020

2019 journal article

Development of a third-generation glucose sensor based on the open circuit potential for continuous glucose monitoring

BIOSENSORS & BIOELECTRONICS, 124, 216–223.

By: I. Lee n, N. Loew n, W. Tsugawa*, K. Ikebukuro* & K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: Open circuit potential; Third generation glucose sensor; Continuous glucose monitoring (CGM); Direct electron transfer; FAD dependent glucose dehydrogenase (FADGDH)
MeSH headings : Biosensing Techniques; Blood Glucose / chemistry; Blood Glucose Self-Monitoring / methods; Diabetes Mellitus / blood; Diabetes Mellitus / pathology; Flavin-Adenine Dinucleotide / chemistry; Glucose / chemistry; Glucose / isolation & purification; Glucose 1-Dehydrogenase / chemistry; Humans; Insulin / chemistry; Insulin / metabolism
Sources: Web Of Science, ORCID
Added: December 31, 2018

2019 journal article

G-Quadruplex Structure Improves the Immunostimulatory Effects of CpG Oligonucleotides

NUCLEIC ACID THERAPEUTICS, 29(4), 224–229.

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: CpG ODN; toll-like receptor 9; G-quadruplex; IL-6; peripheral blood mononuclear cells
MeSH headings : Adjuvants, Immunologic / genetics; Adjuvants, Immunologic / pharmacology; Animals; Cell Line; CpG Islands / drug effects; G-Quadruplexes; Humans; Immunologic Factors / genetics; Leukocytes, Mononuclear / drug effects; Leukocytes, Mononuclear / immunology; Nucleic Acid Conformation / drug effects; Oligonucleotides, Antisense / chemistry; Oligonucleotides, Antisense / genetics; Phosphates / chemistry; Phosphates / metabolism
Sources: Web Of Science, ORCID
Added: August 19, 2019

2019 journal article

Third generation impedimetric sensor employing direct electron transfer type glucose dehydrogenase

BIOSENSORS & BIOELECTRONICS, 129, 189–197.

By: Y. Ito*, J. Okuda-Shimazaki n, W. Tsugawa*, N. Loew n, I. Shitanda*, C. Lin*, J. La Belle*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: Faradaic electrochemical impedance spectroscopy; Impedimetric biosensor; Direct electron transfer; FAD dependent glucose dehydrogenase complex; Charge transfer resistance; Imaginary impedance monitoring
MeSH headings : Bacteria / enzymology; Biosensing Techniques / methods; Electric Impedance; Electrodes; Electron Transport; Flavin-Adenine Dinucleotide / chemistry; Glucose / analysis; Glucose 1-Dehydrogenase / chemistry; Gold / chemistry
Sources: Web Of Science, ORCID
Added: March 11, 2019

2019 journal article

X-ray structure of the direct electron transfer-type FAD glucose dehydrogenase catalytic subunit complexed with a hitchhiker protein

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 75, 841–851.

By: H. Yoshida*, K. Kojima*, M. Shiota*, K. Yoshimatsu*, T. Yamazaki*, S. Ferri*, W. Tsugawa*, S. Kamitori*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: direct electron transfer; flavin adenine dinucleotide-dependent dehydrogenase complex; glucose dehydrogenase; iron-sulfur cluster; hitchhiker protein; glucose sensors; Burkholderia cepacia
MeSH headings : Burkholderia cepacia / enzymology; Catalytic Domain; Crystallography, X-Ray / methods; Electron Transport; Flavin-Adenine Dinucleotide / chemistry; Glucose Dehydrogenases / chemistry; Models, Molecular; Recombinant Proteins / chemistry
Sources: Web Of Science, ORCID
Added: September 23, 2019

2018 journal article

A Disposable Tear Glucose Biosensor-Part 5: Improvements in Reagents and Tear Sampling Component.

Journal of Diabetes Science and Technology, 12(4), 842–846.

By: C. Lin*, Y. Ito*, A. Deng*, J. Johns*, D. Matloff*, C. Cook*, K. Sode n, J. La Belle*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: C. Lin*, Y. Ito*, A. Deng*, J. Johns*, D. Matloff*, C. Cook*, K. Sode n, J. La Belle*

MeSH headings : Biosensing Techniques / instrumentation; Biosensing Techniques / methods; Blood Glucose / analysis; Contact Lenses; Glucose 1-Dehydrogenase; Humans; Indicators and Reagents; Tears / chemistry
Source: ORCID
Added: October 9, 2020

2018 journal article

Biomolecular engineering of redox enzymes: Alteration of the electron acceptor preference; from oxygen to direct electron transfer

Abstracts of Papers of the American Chemical Society, 255. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000435537700584&KeyUID=WOS:000435537700584

By: K. Sode

Contributors: K. Sode

Source: ORCID
Added: October 9, 2020

2018 journal article

Comprehensive study of domain rearrangements of single-chain bispecific antibodies to determine the best combination of configurations and microbial host cells

Mabs, 10(6), 854–863.

By: R. Asano*, Y. Kuroki*, S. Honma, M. Akabane, S. Watanabe, S. Mayuzumi*, S. Hiyamuta*, I. Kumagai*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: R. Asano*, Y. Kuroki*, S. Honma, M. Akabane, S. Watanabe, S. Mayuzumi*, S. Hiyamuta*, I. Kumagai*, K. Sode n

author keywords: Brevibacillus choshinensis; cancer immunotherapy; CD3; diabody; effective domain order; epidermal growth factor receptor; host cell; Pichia pastoris; small bispecific antibody; tandem scFv
MeSH headings : Antibodies, Bispecific / genetics; Antibodies, Bispecific / immunology; Binding Sites / genetics; Binding Sites / immunology; Brevibacillus / genetics; Cell Line, Tumor; Cell Survival / immunology; Electrophoresis, Polyacrylamide Gel; Escherichia coli / genetics; Genetic Variation; Humans; Pichia / genetics; Recombinant Fusion Proteins / genetics; Recombinant Fusion Proteins / immunology; Recombinant Fusion Proteins / metabolism; Single-Chain Antibodies / genetics; Single-Chain Antibodies / immunology
Source: ORCID
Added: October 9, 2020

2018 journal article

Construction and characterization of flavin adenine dinucleotide glucose dehydrogenase complex harboring a truncated electron transfer subunit

ELECTROCHIMICA ACTA, 277, 276–286.

By: J. Okuda-Shimazaki*, N. Loew n, N. Hirose n, K. Kojima*, K. Mori*, W. Tsugawa*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: J. Okuda-Shimazaki*, N. Loew n, N. Hirose n, K. Kojima*, K. Mori*, W. Tsugawa*, K. Sode n

author keywords: Direct electron transfer; Truncated electron transfer subunit; Heme c; Glucose dehydrogenase; Glucose sensing
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 journal article

Development of a glucose sensor employing quick and easy modification method with mediator for altering electron acceptor preference

BIOELECTROCHEMISTRY, 121, 185–190.

By: M. Hatada*, N. Loew n, Y. Inose-Takahashi*, J. Okuda-Shimazaki*, W. Tsugawa*, A. Mulchandani*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: M. Hatada*, N. Loew n, Y. Inose-Takahashi*, J. Okuda-Shimazaki*, W. Tsugawa*, A. Mulchandani*, K. Sode n

author keywords: 2.5th generation biosensor; Electrochemical enzyme sensor; Mediator modification of enzymes; Glucose dehydrogenase; Glucoside 3-dehydrogenase; Lactate oxidase
MeSH headings : Aerococcus / enzymology; Agrobacterium tumefaciens / enzymology; Biosensing Techniques / methods; Blood Glucose / analysis; Botrytis / enzymology; Electron Transport; Enzymes, Immobilized / chemistry; Glucose / analysis; Glucose 1-Dehydrogenase / chemistry; Glucose Dehydrogenases / chemistry; Humans; Mixed Function Oxygenases / chemistry; Phenazines / chemistry; Recombinant Proteins / chemistry
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 journal article

Development of an electrochemical detection system for CpG methylation of human genome using methyl CpG binding domain and zinc finger protein

Abstracts of Papers of the American Chemical Society, 256. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000447600001002&KeyUID=WOS:000447600001002

By: J. Lee, W. Yoshida, D. Hiraoka, A. Tatsumi, K. Abe, K. Nakabayashi, H. Wakeda, K. Hata ...

Contributors: J. Lee, W. Yoshida, D. Hiraoka, A. Tatsumi, K. Abe, K. Nakabayashi, H. Wakeda, K. Hata ...

Source: ORCID
Added: October 9, 2020

2018 journal article

Development toward a novel integrated tear lactate sensor using Schirmer test strip and engineered lactate oxidase

SENSORS AND ACTUATORS B-CHEMICAL, 270, 525–529.

By: C. Lin*, K. Hiraka*, D. Matloff*, J. Johns*, A. Deng*, K. Sode n, J. La Belle*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: C. Lin*, K. Hiraka*, D. Matloff*, J. Johns*, A. Deng*, K. Sode n, J. La Belle*

author keywords: Tear lactate; Schirmer's test strip; Integrated sensor; Lactate oxidase; Oxygen interference
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 journal article

Direct electron transfer (DET) mechanism of FAD dependent dehydrogenase complexes ∼from the elucidation of intra- and inter-molecular electron transfer pathway to the construction of engineered DET enzyme complexes∼

Current Opinion in Electrochemistry.

By: Y. Yamashita*, I. Lee*, N. Loew n & K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: Y. Yamashita*, I. Lee*, N. Loew n & K. Sode n

Source: ORCID
Added: October 9, 2020

2018 article

Elucidation of the intra- and inter-molecular electron transfer pathways of glucoside 3-dehydrogenase

Miyazaki, R., Yamazaki, T., Yoshimatsu, K., Kojima, K., Asano, R., Sode, K., & Tsugawa, W. (2018, August). BIOELECTROCHEMISTRY, Vol. 122, pp. 115–122.

By: R. Miyazaki*, T. Yamazaki*, K. Yoshimatsu*, K. Kojima*, R. Asano*, K. Sode n, W. Tsugawa*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: R. Miyazaki*, T. Yamazaki*, K. Yoshimatsu*, K. Kojima*, R. Asano*, K. Sode n, W. Tsugawa*

author keywords: Glucoside 3 dehydrogenase; Electron transfer pathway; FAD; Fe-S cluster; Heme c
MeSH headings : Agrobacterium tumefaciens / chemistry; Agrobacterium tumefaciens / enzymology; Agrobacterium tumefaciens / genetics; Amino Acid Sequence; Catalytic Domain; Electron Transport; Genes, Bacterial; Glucose Dehydrogenases / chemistry; Glucose Dehydrogenases / genetics; Glucose Dehydrogenases / metabolism; Iron-Sulfur Proteins / chemistry; Iron-Sulfur Proteins / genetics; Iron-Sulfur Proteins / metabolism; Multigene Family; Sequence Alignment
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 journal article

Engineered fungus derived FAD-dependent glucose dehydrogenase with acquired ability to utilize hexaammineruthenium(III) as an electron acceptor

Bioelectrochemistry, 123, 62–69.

By: M. Okurita*, N. Suzuki*, N. Loew n, H. Yoshida*, W. Tsugawa*, K. Mori*, K. Kojima*, D. Klonoff*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: M. Okurita*, N. Suzuki*, N. Loew n, H. Yoshida*, W. Tsugawa*, K. Mori*, K. Kojima*, D. Klonoff*, K. Sode n

author keywords: Glucose dehydrogenase; Glucose oxidase; Flavin adenine dinucleotide; Aspergillus flavus; Hexaammineruthenium chloride; Enzyme sensor strip
MeSH headings : Amino Acid Substitution; Aspergillus flavus / enzymology; Aspergillus flavus / genetics; Aspergillus flavus / metabolism; Electrochemical Techniques; Electrons; Flavin-Adenine Dinucleotide / metabolism; Glucose 1-Dehydrogenase / genetics; Glucose 1-Dehydrogenase / metabolism; Models, Molecular; Protein Engineering; Ruthenium Compounds / metabolism
Source: ORCID
Added: October 9, 2020

2018 journal article

Esterification of PQQ Enhances Blood-Brain Barrier Permeability and Inhibitory Activity against Amyloidogenic Protein Fibril Formation.

ACS Chemical Neuroscience.

By: K. Tsukakoshi*, W. Yoshida*, M. Kobayashi*, N. Kobayashi*, J. Kim*, T. Kaku*, T. Iguchi*, K. Nagasawa* ...

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: K. Tsukakoshi*, W. Yoshida*, M. Kobayashi*, N. Kobayashi*, J. Kim*, T. Kaku*, T. Iguchi*, K. Nagasawa* ...

author keywords: Pyrroloquinoline quinone trimethylester; alpha-synuclein; amyloid beta; blood-brain barrier permeability
MeSH headings : Amyloid / drug effects; Amyloid beta-Peptides / drug effects; Amyloid beta-Peptides / metabolism; Amyloidogenic Proteins / drug effects; Animals; Blood-Brain Barrier / metabolism; Cell Line, Tumor; Cell Survival / drug effects; Esterification; Esters / chemical synthesis; Esters / pharmacology; Humans; Mice; Neurons / drug effects; Neurons / metabolism; PQQ Cofactor / analogs & derivatives; PQQ Cofactor / chemical synthesis; PQQ Cofactor / pharmacology; Peptide Fragments / drug effects; Peptide Fragments / metabolism; Permeability; Prion Proteins / drug effects; Prion Proteins / metabolism; Protein Aggregation, Pathological / metabolism; alpha-Synuclein / drug effects; alpha-Synuclein / metabolism
Source: ORCID
Added: October 9, 2020

2018 journal article

Glycogen Production in Marine Cyanobacterial Strain Synechococcus sp NKBG 15041c

Marine Biotechnology, 20(2), 109–117.

By: A. Badary*, S. Takamatsu*, M. Nakajima*, S. Ferri*, P. Lindblad* & K. Sode*

co-author countries: Japan 🇯🇵 Sweden 🇸🇪

Contributors: A. Badary*, S. Takamatsu*, M. Nakajima*, S. Ferri*, P. Lindblad* & K. Sode*

author keywords: Marine cyanobacteria; Synechococcus; Glycogen; Bioprocess; Carbohydrate production
MeSH headings : Biofuels; Glycogen / biosynthesis; Nitrogen / metabolism; Seawater; Synechococcus / genetics; Synechococcus / growth & development; Synechococcus / metabolism; Transcription, Genetic; Transcriptome
Source: ORCID
Added: October 9, 2020

2018 journal article

Improving the induction fold of riboregulators for cyanobacteria

Rna Biology, 15(3), 353–358.

By: I. Sakamoto*, K. Abe*, S. Kawai*, K. Tsukakoshi*, Y. Sakai*, K. Sode*, K. Ikebukuro*

co-author countries: Japan 🇯🇵

Contributors: I. Sakamoto*, K. Abe*, S. Kawai*, K. Tsukakoshi*, Y. Sakai*, K. Sode*, K. Ikebukuro*

author keywords: Cyanobacteria; post-transcriptional gene; regulation; riboregulator; RNA engineering; synthetic biology
MeSH headings : Gene Expression Regulation, Bacterial; Genetic Engineering / methods; Models, Molecular; Nucleic Acid Conformation; Promoter Regions, Genetic; RNA / chemistry; RNA / genetics; Synechocystis / genetics; Synechocystis / growth & development; Transcriptional Activation
Source: ORCID
Added: October 9, 2020

2018 journal article

Minimizing the effects of oxygen interference on L-lactate sensors by a single amino acid mutation in Aerococcus viridans L-lactate oxidase

Biosensors & Bioelectronics, 103, 163–170.

By: K. Hiraka*, K. Kojima*, C. Lin*, W. Tsugawa*, R. Asano*, J. La Belle*, K. Sode*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: K. Hiraka*, K. Kojima*, C. Lin*, W. Tsugawa*, R. Asano*, J. La Belle*, K. Sode*

author keywords: L-lactate oxidase; L-lactate; Oxygen; Screen-printed carbon electrode; Site-directed mutagenesis; Biomedical engineering
MeSH headings : Amino Acids / chemistry; Biosensing Techniques; Lactic Acid / chemistry; Lactic Acid / isolation & purification; Mixed Function Oxygenases / chemistry; Mixed Function Oxygenases / genetics; Mutation; Oxidation-Reduction; Oxygen / chemistry
Source: ORCID
Added: October 9, 2020

2018 journal article

Mutagenesis Study of the Cytochrome c Subunit Responsible for the Direct Electron Transfer-Type Catalytic Activity of FAD-Dependent Glucose Dehydrogenase

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 19(4).

By: Y. Yamashita*, N. Suzuki*, N. Hirose*, K. Kojima*, W. Tsugawa* & K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: Y. Yamashita*, N. Suzuki*, N. Hirose*, K. Kojima*, W. Tsugawa* & K. Sode n

author keywords: glucose dehydrogenase; direct electron transfer; cytochrome c; glucose sensor; biomedical engineering
MeSH headings : Amino Acid Sequence; Biocatalysis; Catalytic Domain / genetics; Cytochromes c / chemistry; Cytochromes c / genetics; Electrodes; Electrons; Enzyme Assays; Flavin-Adenine Dinucleotide / metabolism; Glucose 1-Dehydrogenase / metabolism; Mutagenesis / genetics; Mutant Proteins / metabolism; Solutions
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 journal article

Quasi-direct electron transfer-type glucose sensor based on engineered glucose oxidase

Abstracts of Papers of the American Chemical Society, 256. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000447600001209&KeyUID=WOS:000447600001209

By: N. Loew, N. Suzuki, W. Tsugawa, Y. Inose-Takahashi, M. Hatada, K. Mori, K. Sode

Contributors: N. Loew, N. Suzuki, W. Tsugawa, Y. Inose-Takahashi, M. Hatada, K. Mori, K. Sode

Source: ORCID
Added: October 9, 2020

2018 journal article

Self-powered, wireless continuous glucose sensing system based direct electron transfer

Abstracts of Papers of the American Chemical Society, 256. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000447600000887&KeyUID=WOS:000447600000887

By: I. Lee, N. Loew, W. Tsugawa, K. Ikebukuro & K. Sode

Contributors: I. Lee, N. Loew, W. Tsugawa, K. Ikebukuro & K. Sode

Source: ORCID
Added: October 9, 2020

2018 journal article

Smart aptamers forming G-quadruplex: Structural and functional change of aptamers forming G-quadruplex in response to surrounding conditions and its regulation with the ligands

Abstracts of Papers of the American Chemical Society, 256. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000447600001223&KeyUID=WOS:000447600001223

By: K. Tsukakoshi, M. Nishio, I. Sasaki, Y. Ma, K. Nagasawa, Y. Kato, C. Nakamura, K. Sode, K. Ikebukuro

Contributors: K. Tsukakoshi, M. Nishio, I. Sasaki, Y. Ma, K. Nagasawa, Y. Kato, C. Nakamura, K. Sode, K. Ikebukuro

Source: ORCID
Added: October 9, 2020

2018 journal article

Synthesis of a hemin-containing copolymer as a novel immunostimulator that induces IFN-gamma production

International Journal of Nanomedicine, 13, 4461–4472.

By: K. Hoshi, T. Yamazaki, C. Yoshikawa, W. Tsugawa, K. Ikebukuro & K. Sode*

Contributors: K. Hoshi, T. Yamazaki, C. Yoshikawa, W. Tsugawa, K. Ikebukuro & K. Sode*

author keywords: hemin copolymer; immunostimulator; adjuvant; radical polymerization; NIPAM; toll-like receptor 9; T-helper 1; inflammasome
MeSH headings : Acrylic Resins / chemical synthesis; Acrylic Resins / chemistry; Cell Death / drug effects; Cell Line; Hemin / pharmacology; Humans; Immunologic Factors / pharmacology; Interferon-gamma / biosynthesis; Interleukin-6 / biosynthesis; NF-kappa B / metabolism; Polymers / chemical synthesis; Polymers / chemistry; Signal Transduction / drug effects; Spectrophotometry, Ultraviolet; Spectroscopy, Fourier Transform Infrared; Toll-Like Receptors / metabolism
Source: ORCID
Added: October 9, 2020

2018 journal article

The electrochemical behavior of a FAD dependent glucose dehydrogenase with direct electron transfer subunit by immobilization on self-assembled monolayers

Bioelectrochemistry, 121, 1–6.

By: I. Lee*, N. Loew*, W. Tsugawa*, C. Lin*, D. Probst*, J. Belle*, K. Sode n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: I. Lee*, N. Loew*, W. Tsugawa*, C. Lin*, D. Probst*, J. La Belle*, K. Sode n

MeSH headings : Biosensing Techniques / methods; Blood Glucose / analysis; Blood Glucose / metabolism; Burkholderia cepacia / enzymology; Electrochemical Techniques / methods; Electron Transport; Enzymes, Immobilized / metabolism; Flavin-Adenine Dinucleotide / metabolism; Glucose / analysis; Glucose / metabolism; Glucose 1-Dehydrogenase / metabolism; Humans
Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2018 journal article

Wearable and implantable biosensing technologies based on the direct electron transfer principle

Abstracts of Papers of the American Chemical Society, 256. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000447600001124&KeyUID=WOS:000447600001124

By: K. Sode, N. Loew, I. Lee, Y. Ito & W. Tsugawa

Contributors: K. Sode, N. Loew, I. Lee, Y. Ito & W. Tsugawa

Source: ORCID
Added: October 9, 2020

2017 journal article

Applying a riboregulator as a new chromosomal gene regulation tool for higher glycogen production in Synechocystis sp PCC 6803

Applied Microbiology and Biotechnology, 101(23-24), 8465–8474.

By: K. Ueno*, Y. Sakai*, C. Shono*, I. Sakamoto*, K. Tsukakoshi*, Y. Hihara*, K. Sode*, K. Ikebukuro*

co-author countries: Japan 🇯🇵

Contributors: K. Ueno*, Y. Sakai*, C. Shono*, I. Sakamoto*, K. Tsukakoshi*, Y. Hihara*, K. Sode*, K. Ikebukuro*

author keywords: Riboregulator; Synechocystis sp PCC 6803; Cyanobacteria; cyabrB2; Gene regulation; Glycogen production
MeSH headings : Gene Expression Regulation, Bacterial; Genes, Regulator; Glycogen / biosynthesis; Metabolic Engineering / methods; Synechocystis / genetics; Synechocystis / metabolism; Transcription, Genetic
Source: ORCID
Added: October 9, 2020

2017 journal article

Characterization of Electron Mediator Preference of Aerococcus viridans-Derived Lactate Oxidase for Use in Disposable Enzyme Sensor Strips

Sensors and Materials, 29(12), 1703–1711.

By: N. Loew, M. Fitriana, K. Hiraka, K. Sode & W. Tsugawa

Contributors: N. Loew, M. Fitriana, K. Hiraka, K. Sode & W. Tsugawa

author keywords: lactate oxidase; screen-printed carbon electrode; electron mediator; 1-methoxy-5-methyl phenazinium methyl sulfate; potassium ferricyanide; hexaammineruthenium(III) chloride; biomedical engineering
Source: ORCID
Added: October 9, 2020

2017 journal article

Continuous operation of an ultra-low-power microcontroller using glucose as the sole energy source

Biosensors & Bioelectronics, 93, 335–339.

By: I. Lee*, T. Sode*, N. Loew*, W. Tsugawa*, C. Lowe* & K. Sode*

co-author countries: United Kingdom of Great Britain and Northern Ireland 🇬🇧 Japan 🇯🇵

Contributors: I. Lee*, T. Sode*, N. Loew*, W. Tsugawa*, C. Lowe* & K. Sode*

author keywords: Microcontroller; BioCapacitor; Enzyme fuel cell; Direct electron transfer; Implantable artificial organs; Self-powered; Glucose sensor
MeSH headings : Artificial Organs; Bioelectric Energy Sources; Biosensing Techniques; Electrodes; Glucose / chemistry; Glucose 1-Dehydrogenase / chemistry; Humans
Source: ORCID
Added: October 9, 2020

2017 journal article

Development of a screen-printed carbon electrode based disposable enzyme sensor strip for the measurement of glycated albumin

Biosensors & Bioelectronics, 88, 167–173.

By: M. Hatada*, W. Tsugawa*, E. Kamio*, N. Loew*, D. Klonoff* & K. Sode*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: M. Hatada*, W. Tsugawa*, E. Kamio*, N. Loew*, D. Klonoff* & K. Sode*

author keywords: Diabetes mellitus; Glycated albumin; Fructosyl amino acid oxidase; Hemoglobin A1c; Point-of-care testing; Screen-printed carbon electrode
MeSH headings : Amino Acid Oxidoreductases / chemistry; Biosensing Techniques / instrumentation; Carbon / chemistry; Electrodes; Equipment Design; Glycation End Products, Advanced; Humans; Limit of Detection; Point-of-Care Systems; Reagent Strips / analysis; Serum Albumin / analysis; Glycated Serum Albumin
Source: ORCID
Added: October 9, 2020

2017 journal article

Development of an electrochemical detection system for measuring DNA methylation levels using methyl CpG-binding protein and glucose dehydrogenase-fused zinc finger protein

Biosensors & Bioelectronics, 93, 118–123.

co-author countries: France 🇫🇷 Japan 🇯🇵
author keywords: DNA methylation; Electrochemical detection; Diagnosis; Zinc finger protein; Glucose dehydrogenase; Methyl-CpG binding domain
MeSH headings : Biosensing Techniques; CpG Islands / genetics; DNA / chemistry; DNA Methylation / genetics; DNA-Binding Proteins / chemistry; Glucose 1-Dehydrogenase / chemistry; Glucose 1-Dehydrogenase / genetics; Humans; Promoter Regions, Genetic
Source: ORCID
Added: October 9, 2020

2017 journal article

Mediator Preference of Two Different FAD-Dependent Glucose Dehydrogenases Employed in Disposable Enzyme Glucose Sensors

Sensors, 17(11).

By: N. Loew*, W. Tsugawa*, D. Nagae*, K. Kojima* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: N. Loew*, W. Tsugawa*, D. Nagae*, K. Kojima* & K. Sode*

author keywords: glucose dehydrogenase; flavin adenine dinucleotide; Aspergillus flavus; Burkholderia cepacia; enzyme sensor strip; mediated electron transfer; potassium ferricyanide; methoxy phenazine methosulfate; hexaammineruthenium chloride
MeSH headings : Biosensing Techniques; Flavin-Adenine Dinucleotide; Glucose / analysis; Glucose Dehydrogenases
Source: ORCID
Added: October 9, 2020

2017 chapter

Minimally invasive microneedle array electrodes employing direct electron transfer type glucose dehydrogenase for the development of continuous glucose monitoring sensors

In Biosensors 2016 (Vol. 27, pp. 208–209).

By: S. Sharma*, E. Takagi*, T. Cass*, W. Tsugawa* & K. Sode*

co-author countries: United Kingdom of Great Britain and Northern Ireland 🇬🇧 Japan 🇯🇵

Contributors: S. Sharma*, E. Takagi*, T. Cass*, W. Tsugawa* & K. Sode*

author keywords: continuous glucose monitoring; minimally invasive sensors; direct electron transfer; microneedles
Source: ORCID
Added: October 9, 2020

2017 journal article

Novel fungal FAD glucose dehydrogenase derived from Aspergillus niger for glucose enzyme sensor strips

Biosensors & Bioelectronics, 87, 305–311.

By: K. Sode*, N. Loew*, Y. Ohnishi*, H. Tsuruta*, K. Mori*, K. Kojima*, W. Tsugawa*, J. LaBelle*, D. Klonoff*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: K. Sode*, N. Loew*, Y. Ohnishi*, H. Tsuruta*, K. Mori*, K. Kojima*, W. Tsugawa*, J. LaBelle*, D. Klonoff*

author keywords: FAD-dependent glucose dehydrogenase; Aspergillus niger; Aspergillus flavus; Glucose specificity; Xylose; BG Monitor
MeSH headings : Aspergillus niger / chemistry; Aspergillus niger / enzymology; Aspergillus niger / metabolism; Biosensing Techniques / methods; Flavin-Adenine Dinucleotide / metabolism; Glucose / analysis; Glucose / metabolism; Glucose Dehydrogenases / chemistry; Glucose Dehydrogenases / metabolism; Humans; Models, Molecular; Substrate Specificity; Xylose / metabolism
Source: ORCID
Added: October 9, 2020

2017 journal article

X-ray structures of fructosyl peptide oxidases revealing residues responsible for gating oxygen access in the oxidative half reaction

Scientific Reports, 7(1).

By: T. Shimasaki*, H. Yoshida*, S. Kamitori* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: T. Shimasaki*, H. Yoshida*, S. Kamitori* & K. Sode*

MeSH headings : Amino Acid Oxidoreductases / chemistry; Amino Acid Oxidoreductases / genetics; Amino Acid Oxidoreductases / metabolism; Amino Acid Substitution; Amino Acids / chemistry; Amino Acids / genetics; Amino Acids / metabolism; Binding Sites; Crystallography, X-Ray; Flavin-Adenine Dinucleotide / chemistry; Flavin-Adenine Dinucleotide / metabolism; Glycated Hemoglobin / metabolism; Models, Molecular; Mutagenesis, Site-Directed; Oxidation-Reduction; Oxygen / chemistry; Oxygen / metabolism; Protein Conformation; Structure-Activity Relationship
Source: ORCID
Added: October 9, 2020

2016 journal article

An Fe-S cluster in the conserved Cys-rich region in the catalytic subunit of FAD-dependent dehydrogenase complexes

Bioelectrochemistry, 112, 178–183.

By: M. Shiota*, T. Yamazaki*, K. Yoshimatsu*, K. Kojima*, W. Tsugawa*, S. Ferri*, K. Sode*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: M. Shiota*, T. Yamazaki*, K. Yoshimatsu*, K. Kojima*, W. Tsugawa*, S. Ferri*, K. Sode*

author keywords: Fe-S cluster; Glucose dehydrogenase; FAD; Direct electron transfer; FAD-dependent dehydrogenase
MeSH headings : Amino Acid Sequence; Catalytic Domain; Conserved Sequence; Cysteine; Flavin-Adenine Dinucleotide / metabolism; Glucose 1-Dehydrogenase / chemistry; Glucose 1-Dehydrogenase / genetics; Glucose 1-Dehydrogenase / metabolism; Iron; Models, Molecular; Mutagenesis, Site-Directed; Mutation; Sulfur
Source: ORCID
Added: October 9, 2020

2016 journal article

BioCapacitor: A novel principle for biosensors

Biosensors & Bioelectronics, 76, 20–28.

By: K. Sode*, T. Yamazaki*, I. Lee*, T. Hanashi* & W. Tsugawa*

co-author countries: Japan 🇯🇵

Contributors: K. Sode*, T. Yamazaki*, I. Lee*, T. Hanashi* & W. Tsugawa*

author keywords: BioCapacitor; Enzyme fuel cell; Charge pump; Implantable devices; Continuous glucose monitoring
MeSH headings : Biocatalysis; Bioelectric Energy Sources; Biosensing Techniques / instrumentation; Biosensing Techniques / methods; Electricity; Enzymes / chemistry; Glucose / isolation & purification; Glucose / metabolism; Humans
Source: ORCID
Added: October 9, 2020

2016 journal article

Construction of a Miniaturized Chromatic Acclimation Sensor from Cyanobacteria with Reversed Response to a Light Signal

Scientific Reports, 6.

By: M. Nakajima*, S. Ferri*, M. Rogner* & K. Sode*

co-author countries: Germany 🇩🇪 Japan 🇯🇵

Contributors: M. Nakajima*, S. Ferri*, M. Rogner* & K. Sode*

MeSH headings : Acclimatization; Bacterial Proteins / chemistry; Bacterial Proteins / metabolism; Cells, Cultured; Cyanobacteria / metabolism; Fluorescence; Gene Expression Regulation, Bacterial; Light Signal Transduction; Miniaturization / instrumentation; Models, Molecular; Protein Domains
Source: ORCID
Added: October 9, 2020

2016 journal article

Development of a light-regulated cell-recovery system for non-photosynthetic bacteria

Microbial Cell Factories, 15(1).

By: M. Nakajima*, K. Abe*, S. Ferri* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: M. Nakajima*, K. Abe*, S. Ferri* & K. Sode*

author keywords: Antigen 43; Green light induction; Cell recovery; Green light sensor; Optogenetics; Escherichia coli
MeSH headings : Escherichia coli / cytology; Escherichia coli / radiation effects; Genetic Vectors / metabolism; Light; Photosynthesis / radiation effects; Plasmids / metabolism; Synechocystis / radiation effects; Time Factors; Transcription, Genetic / radiation effects
Source: ORCID
Added: October 9, 2020

2016 journal article

Electrochemical sensing system employing fructosamine 6-kinase enables glycated albumin measurement requiring no proteolytic digestion

Biotechnology Journal, 11(6), 797–804.

By: M. Kameya*, W. Tsugawa*, M. Yamada-Tajima*, M. Hatada*, K. Suzuki*, A. Sakaguchi-Mikami*, S. Ferri*, D. Klonoff*, K. Sode*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: M. Kameya*, W. Tsugawa*, M. Yamada-Tajima*, M. Hatada*, K. Suzuki*, A. Sakaguchi-Mikami*, S. Ferri*, D. Klonoff*, K. Sode*

author keywords: Diabetes; Fructosamine 6-kinase; Glycated albumin; Glycated protein; Proteolytic digestion
MeSH headings : Biosensing Techniques / methods; Diabetes Mellitus / blood; Electrochemical Techniques / methods; Escherichia coli / enzymology; Escherichia coli Proteins / chemistry; Fructosamine / chemistry; Glycation End Products, Advanced; Humans; Oxidoreductases / chemistry; Phosphotransferases (Alcohol Group Acceptor) / chemistry; Proteolysis; Pyruvate Kinase / chemistry; Serum Albumin / analysis; Glycated Serum Albumin
Source: ORCID
Added: October 9, 2020

2016 journal article

Structural regulation by a G-quadruplex ligand increases binding abilities of G-quadruplex-forming aptamers

Chemical Communications, 52(85), 12646–12649.

co-author countries: Japan 🇯🇵
Source: ORCID
Added: October 9, 2020

2015 journal article

3RD GENERATION CGM SENSOR EMPLOYING DIRECT ELECTRON TRANSFER PRINCIPLE WITH IMPROVED OPERATIONAL CONDITIONS

Diabetes Technology & Therapeutics, 17, A90. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000349317500203&KeyUID=WOS:000349317500203

By: S. Sekimoto, K. Shinozaki, Y. Murase, Y. Kusaka, W. Tsugawa & K. Sode

Contributors: S. Sekimoto, K. Shinozaki, Y. Murase, Y. Kusaka, W. Tsugawa & K. Sode

Source: ORCID
Added: October 9, 2020

2015 journal article

Advancing the development of glycated protein biosensing technology: next-generation sensing molecules.

Journal of Diabetes Science and Technology, 9(2), 183–191.

By: M. Kameya*, A. Sakaguchi-Mikami*, S. Ferri*, W. Tsugawa* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: M. Kameya*, A. Sakaguchi-Mikami*, S. Ferri*, W. Tsugawa* & K. Sode*

MeSH headings : Amino Acid Oxidoreductases; Biomarkers / analysis; Biosensing Techniques / methods; Fructosamine; Humans
Source: ORCID
Added: October 9, 2020

2015 article

Crystal structure of Aspergillus flavus FAD glucose dehydrogenase

Worldwide Protein Data Bank.

By: H. Yoshida, G. Sakai, K. Mori, K. Kojima, S. Kamitori & K. Sode*

Contributors: H. Yoshida, G. Sakai, K. Mori, K. Kojima, S. Kamitori & K. Sode*

Source: ORCID
Added: October 9, 2020

2015 article

Crystal structure of Aspergillus flavus FADGDH in complex with D-glucono-1,5-lactone

Worldwide Protein Data Bank.

By: H. Yoshida, G. Sakai, K. Mori, K. Kojima, S. Kamitori & K. Sode*

Contributors: H. Yoshida, G. Sakai, K. Mori, K. Kojima, S. Kamitori & K. Sode*

Source: ORCID
Added: October 9, 2020

2015 journal article

Development of an electrochemical adenosine diphosphate (ADP) sensing principle employing ADP-dependent kinase

Sensors and Materials, 27(9), 839–845.

By: W. Tsugawa, H. Futagami & K. Sode

Contributors: W. Tsugawa, H. Futagami & K. Sode

Source: ORCID
Added: October 9, 2020

2015 journal article

Effects of Eliminating Pyruvate Node Pathways and of Coexpression of Heterogeneous Carboxylation Enzymes on Succinate Production by Enterobacter aerogenes

Applied and Environmental Microbiology, 81(3), 929–937.

By: Y. Tajima*, Y. Yamamoto*, K. Fukui*, Y. Nishio*, K. Hashiguchi*, Y. Usuda*, K. Sode*

co-author countries: Japan 🇯🇵

Contributors: Y. Tajima*, Y. Yamamoto*, K. Fukui*, Y. Nishio*, K. Hashiguchi*, Y. Usuda*, K. Sode*

MeSH headings : Actinobacillus / enzymology; Actinobacillus / genetics; Corynebacterium glutamicum / enzymology; Corynebacterium glutamicum / genetics; Culture Media / chemistry; Enterobacter aerogenes / enzymology; Enterobacter aerogenes / genetics; Enterobacter aerogenes / metabolism; Gene Deletion; Gene Expression; Glucose / metabolism; Hydrogen-Ion Concentration; Metabolic Engineering; Phosphoenolpyruvate Carboxykinase (ATP) / genetics; Phosphoenolpyruvate Carboxykinase (ATP) / metabolism; Pyruvate Carboxylase / genetics; Pyruvate Carboxylase / metabolism; Pyruvic Acid / metabolism; Succinic Acid / metabolism
Source: ORCID
Added: October 9, 2020

2015 journal article

Efficient surface-display of autotransporter proteins in cyanobacteria

Algal Research-Biomass Biofuels and Bioproducts, 12, 337–340.

By: S. Ferri*, M. Nakamura*, A. Ito*, M. Nakajima*, K. Abe*, K. Kojima*, K. Sode*

co-author countries: Japan 🇯🇵

Contributors: S. Ferri*, M. Nakamura*, A. Ito*, M. Nakajima*, K. Abe*, K. Kojima*, K. Sode*

author keywords: Cyanobacteria; Synechocystis; Autotransporter; Cell-surface display; Recombinant expression
Source: ORCID
Added: October 9, 2020

2015 journal article

Enzyme linking to DNA aptamers via a zinc finger as a bridge

Chemical Communications, 51(57), 11467–11469.

By: K. Abe*, Y. Murakami*, A. Tatsumi*, K. Sumida*, A. Kezuka*, T. Fukaya*, T. Kumagai*, Y. Osawa*, K. Sode*, K. Ikebukuro*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: K. Abe*, Y. Murakami*, A. Tatsumi*, K. Sumida*, A. Kezuka*, T. Fukaya*, T. Kumagai*, Y. Osawa*, K. Sode*, K. Ikebukuro*

MeSH headings : Animals; Aptamers, Nucleotide / chemistry; Biosensing Techniques; Cattle; Enzyme-Linked Immunosorbent Assay; Humans; Luciferases, Firefly / chemistry; Luminescent Agents / chemistry; Luminescent Measurements; Thrombin / analysis; Vascular Endothelial Growth Factor A / analysis; Zinc Fingers
Source: ORCID
Added: October 9, 2020

2015 journal article

Impact of an energy-conserving strategy on succinate production under weak acidic and anaerobic conditions in Enterobacter aerogenes

Microbial Cell Factories, 14(1), (11 June 2015).

By: Y. Tajima*, Y. Yamamoto*, K. Fukui*, Y. Nishio*, K. Hashiguchi*, Y. Usuda*, K. Sode*

co-author countries: Japan 🇯🇵

Contributors: Y. Tajima*, Y. Yamamoto*, K. Fukui*, Y. Nishio*, K. Hashiguchi*, Y. Usuda*, K. Sode*

author keywords: Enterobacter aerogenes; Succinate fermentation; Phosphoenolpyruvate carboxykinase; Glucose-PTS; Weak acidity; Anaerobic metabolism
MeSH headings : Adenosine Triphosphate / metabolism; Anaerobiosis; Culture Media / chemistry; Culture Media / metabolism; Enterobacter aerogenes / genetics; Enterobacter aerogenes / metabolism; Fermentation; Hydrogen-Ion Concentration; Metabolic Engineering / methods; Succinic Acid / metabolism
Source: ORCID
Added: October 9, 2020

2015 journal article

Improvement of the VEGF binding ability of DNA aptamers through in silico maturation and multimerization strategy

Journal of Biotechnology, 212, 99–105.

By: T. Fukaya*, K. Abe*, N. Savory*, K. Tsukakoshi*, W. Yoshida*, S. Ferri*, K. Sode*, K. Ikebukuro*

co-author countries: Japan 🇯🇵

Contributors: T. Fukaya*, K. Abe*, N. Savory*, K. Tsukakoshi*, W. Yoshida*, S. Ferri*, K. Sode*, K. Ikebukuro*

author keywords: Aptamer; in silico maturation; Multimerization; Vascular endothelial growth factor
MeSH headings : Aptamers, Nucleotide / genetics; Aptamers, Nucleotide / metabolism; Computer Simulation; Protein Binding; Protein Multimerization; Surface Plasmon Resonance; Vascular Endothelial Growth Factor A / genetics; Vascular Endothelial Growth Factor A / metabolism
Source: ORCID
Added: October 9, 2020

2015 journal article

Klaus Mosbach Tribute

Biotechnology and Bioengineering, 112(4), 645–647.

By: D. Clark*, I. Karube*, K. Sode*, L. Bulow*, O. Brueggemann, C. Lowe*, P. Poulsen, R. Langer*

co-author countries: Austria 🇦🇹 United Kingdom of Great Britain and Northern Ireland 🇬🇧 Japan 🇯🇵 Sweden 🇸🇪 United States of America 🇺🇸

Contributors: D. Clark*, I. Karube*, K. Sode*, L. Bulow*, O. Brueggemann, C. Lowe*, P. Poulsen, R. Langer*

MeSH headings : Bioengineering / history; Bioengineering / methods; Biomedical Research / trends; Biosensing Techniques / methods; Biotechnology / history; Biotechnology / methods; History, 20th Century; History, 21st Century; Molecular Imprinting / methods
Source: ORCID
Added: October 9, 2020

2015 journal article

Scaffold-fused riboregulators for enhanced gene activation in Synechocystis sp PCC 6803

Microbiologyopen, 4(4), 533–540.

By: Y. Sakai*, K. Abe*, S. Nakashima*, J. Ellinger*, S. Ferri*, K. Sode*, K. Ikebukuro*

co-author countries: Japan 🇯🇵

Contributors: Y. Sakai*, K. Abe*, S. Nakashima*, J. Ellinger*, S. Ferri*, K. Sode*, K. Ikebukuro*

author keywords: Hfq; posttranscriptional gene regulation; riboregulator; Synechocystis sp PCC 6803; synthetic biology
MeSH headings : Gene Expression Regulation, Bacterial; Gene Targeting / methods; Molecular Biology / methods; Synechocystis / genetics; Synthetic Biology / methods; Transcriptional Activation
Source: ORCID
Added: October 9, 2020

2015 journal article

Stabilization of fungi-derived recombinant FAD-dependent glucose dehydrogenase by introducing a disulfide bond

Biotechnology Letters, 37(5), 1091–1099.

By: G. Sakai*, K. Kojima*, K. Mori*, Y. Oonishi* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: G. Sakai*, K. Kojima*, K. Mori*, Y. Oonishi* & K. Sode*

author keywords: Aspergillus flavus; Disulfide bond; FAD; Glucose dehydrogenase; Site directed mutagenesis; Thermal stability
MeSH headings : Disulfides / chemistry; Enzyme Stability; Escherichia coli / enzymology; Escherichia coli / genetics; Glucose 1-Dehydrogenase / chemistry; Glucose 1-Dehydrogenase / genetics; Glucose 1-Dehydrogenase / metabolism; Kinetics; Mutagenesis, Site-Directed; Recombinant Proteins / chemistry; Recombinant Proteins / genetics; Recombinant Proteins / metabolism; Substrate Specificity; Temperature
Source: ORCID
Added: October 9, 2020

2015 journal article

Structural analysis of fungus-derived FAD glucose dehydrogenase

Scientific Reports, 5.

By: H. Yoshida*, G. Sakai*, K. Mori*, K. Kojima*, S. Kamitori* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: H. Yoshida*, G. Sakai*, K. Mori*, K. Kojima*, S. Kamitori* & K. Sode*

MeSH headings : Aspergillus / enzymology; Catalytic Domain; Crystallography, X-Ray; Flavin-Adenine Dinucleotide / metabolism; Gluconates / metabolism; Glucose 1-Dehydrogenase / chemistry; Glucose 1-Dehydrogenase / metabolism; Histidine / chemistry; Hydrogen Bonding; Lactones / metabolism; Models, Molecular; Mutagenesis, Site-Directed; Oxygen / metabolism; Substrate Specificity
Source: ORCID
Added: October 9, 2020

2015 journal article

The Development and Characterization of an Exogenous Green-Light-Regulated Gene Expression System in Marine Cyanobacteria

Marine Biotechnology, 17(3), 245–251.

By: A. Badary*, K. Abe*, S. Ferri*, K. Kojima* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: A. Badary*, K. Abe*, S. Ferri*, K. Kojima* & K. Sode*

author keywords: Marine cyanobacteria; Synechococcus; Optogenetics; Green-light-sensing proteins; Synthetic biology
MeSH headings : Aquatic Organisms; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Cloning, Molecular; Gene Expression Regulation, Bacterial / radiation effects; Genes, Reporter; Genetic Engineering; Genetic Vectors / chemistry; Genetic Vectors / metabolism; Green Fluorescent Proteins / genetics; Green Fluorescent Proteins / metabolism; Histidine Kinase; Light; Promoter Regions, Genetic; Protein Kinases / genetics; Protein Kinases / metabolism; Real-Time Polymerase Chain Reaction; Recombinant Proteins / genetics; Recombinant Proteins / metabolism; Synechococcus / genetics; Synechococcus / metabolism; Synechococcus / radiation effects; Transcription Factors / genetics; Transcription Factors / metabolism; Transcription, Genetic / radiation effects
Source: ORCID
Added: October 9, 2020

2015 journal article

X-ray structure of recombinant nonglycosylated FAD glucose dehydrogenase derived from Aspergillus flavus

Febs Journal, 282, 279. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000362570605056&KeyUID=WOS:000362570605056

By: H. Yoshida, G. Sakai, K. Kojima, S. Kamitori & K. Sode

Contributors: H. Yoshida, G. Sakai, K. Kojima, S. Kamitori & K. Sode

Source: ORCID
Added: October 9, 2020

2014 journal article

A green-light inducible lytic system for cyanobacterial cells

Biotechnology For Biofuels, 7(1), (9 April 2014).

By: K. Miyake*, K. Abe*, S. Ferri*, M. Nakajima*, M. Nakamura*, W. Yoshida*, K. Kojima*, K. Ikebukuro*, K. Sode*

co-author countries: Japan 🇯🇵

Contributors: K. Miyake*, K. Abe*, S. Ferri*, M. Nakajima*, M. Nakamura*, W. Yoshida*, K. Kojima*, K. Ikebukuro*, K. Sode*

author keywords: Cyanobacteria; Self-lysis; Two-component system; T4 bacteriophage; Synthetic biology
Source: ORCID
Added: October 9, 2020

2014 journal article

Design of riboregulators for control of cyanobacterial (Synechocystis) protein expression

Biotechnology Letters, 36(2), 287–294.

By: K. Abe*, Y. Sakai*, S. Nakashima*, M. Araki*, W. Yoshida*, K. Sode*, K. Ikebukuro*

co-author countries: Japan 🇯🇵

Contributors: K. Abe*, Y. Sakai*, S. Nakashima*, M. Araki*, W. Yoshida*, K. Sode*, K. Ikebukuro*

author keywords: Biofuels; Cyanobacteria; Post-transcriptional gene regulation; Riboregulator; Synechocystis; Synthetic biology
MeSH headings : Bacterial Proteins / biosynthesis; Biotechnology / methods; Gene Expression Regulation, Bacterial; Metabolic Engineering / methods; Molecular Biology / methods; RNA / metabolism; Ribosomes / drug effects; Ribosomes / metabolism; Synechocystis / genetics; Synechocystis / metabolism
Source: ORCID
Added: October 9, 2020

2014 journal article

Electrochemical detection of pathogenic bacteria by using a glucose dehydrogenase fused zinc finger protein

Analytical Methods, 6(14), 4991–4994.

By: J. Lee*, A. Tatsumi*, K. Abe*, W. Yoshida*, K. Sode* & K. Ikebukuro*

co-author countries: Japan 🇯🇵

Contributors: J. Lee*, A. Tatsumi*, K. Abe*, W. Yoshida*, K. Sode* & K. Ikebukuro*

Source: ORCID
Added: October 9, 2020

2014 journal article

Engineering glucose oxidase to minimize the influence of oxygen on sensor response

Electrochimica Acta, 126, 158–161.

By: Y. Horaguchi*, S. Saito*, K. Kojima*, W. Tsugawa*, S. Ferri* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: Y. Horaguchi*, S. Saito*, K. Kojima*, W. Tsugawa*, S. Ferri* & K. Sode*

author keywords: Biosensor; Glucose oxidase; Glucose dehydrogenase; Flavin adenine dinucleotide; Oxygen
Source: ORCID
Added: October 9, 2020

2014 journal article

Engineering of a green-light inducible gene expression system in Synechocystis sp PCC6803

Microbial Biotechnology, 7(2), 177–183.

By: K. Abe*, K. Miyake*, M. Nakamura*, K. Kojima*, S. Ferri*, K. Ikebukuro*, K. Sode*

co-author countries: Japan 🇯🇵

Contributors: K. Abe*, K. Miyake*, M. Nakamura*, K. Kojima*, S. Ferri*, K. Ikebukuro*, K. Sode*

MeSH headings : Artificial Gene Fusion; Bacterial Proteins / genetics; Gene Expression; Gene Expression Regulation, Bacterial / radiation effects; Genes, Reporter; Genetic Engineering; Genetics, Microbial / methods; Green Fluorescent Proteins / analysis; Green Fluorescent Proteins / genetics; Light; Promoter Regions, Genetic; Synechocystis / genetics; Synechocystis / radiation effects; Transcriptional Activation / radiation effects
Source: ORCID
Added: October 9, 2020

2014 journal article

Improving the Gene-Regulation Ability of Small RNAs by Scaffold Engineering in Escherichia coli

Acs Synthetic Biology, 3(3), 152–162.

By: Y. Sakai*, K. Abe*, S. Nakashima*, W. Yoshida*, S. Ferri*, K. Sode*, K. Ikebukuro*

co-author countries: Japan 🇯🇵

Contributors: Y. Sakai*, K. Abe*, S. Nakashima*, W. Yoshida*, S. Ferri*, K. Sode*, K. Ikebukuro*

author keywords: attenuator; Hfq; post-transcriptional gene regulation; riboregulator; small RNA; transcriptional gene regulation
MeSH headings : Base Sequence; Escherichia coli / genetics; Gene Expression Regulation, Bacterial / genetics; Genetic Engineering / methods; Molecular Sequence Data; Mutation; Nucleic Acid Conformation; RNA, Small Untranslated / genetics; Synthetic Biology / methods
Source: ORCID
Added: October 9, 2020

2014 journal article

Simultaneous Improvement of Specificity and Affinity of Aptamers Against Streptococcus mutans by In Silico Maturation for Biosensor Development

Biotechnology and Bioengineering, 111(3), 454–461.

By: N. Savory*, Y. Takahashi*, K. Tsukakoshi*, H. Hasegawa*, M. Takase*, K. Abe*, W. Yoshida*, S. Ferri* ...

co-author countries: Japan 🇯🇵

Contributors: N. Savory*, Y. Takahashi*, K. Tsukakoshi*, H. Hasegawa*, M. Takase*, K. Abe*, W. Yoshida*, S. Ferri* ...

author keywords: aptamers; Streptococcus mutans; Cell-SELEX; in silico maturation; flow-through test
MeSH headings : Aptamers, Nucleotide / isolation & purification; Biosensing Techniques / methods; Computer Simulation; Sensitivity and Specificity; Streptococcus mutans / isolation & purification
Source: ORCID
Added: October 9, 2020

2014 journal article

Study of the role of anaerobic metabolism in succinate production by Enterobacter aerogenes

Applied Microbiology and Biotechnology, 98(18), 7803–7813.

By: Y. Tajima*, K. Kaida*, A. Hayakawa*, K. Fukui*, Y. Nishio*, K. Hashiguchi*, R. Fudou, K. Matsui*, Y. Usuda*, K. Sode*

co-author countries: Japan 🇯🇵

Contributors: Y. Tajima*, K. Kaida*, A. Hayakawa*, K. Fukui*, Y. Nishio*, K. Hashiguchi*, R. Fudou, K. Matsui*, Y. Usuda*, K. Sode*

author keywords: Enterobacter aerogenes; Succinate fermentation; Redox balance; Phosphoenolpyruvate carboxykinase; Ethanol dehydrogenase
Source: ORCID
Added: October 9, 2020

2014 journal article

THE 3RD GENERATION CGM SENSOR UTILIZING DIRECT ELECTRON TRANSFER PRINCIPLE

Diabetes Technology & Therapeutics, 16, A78–A79. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000331218000205&KeyUID=WOS:000331218000205

By: S. Sekimoto, K. Shinozaki, Y. Murase, Y. Kusaka, K. Kojima, W. Tsugawa, K. Sode

Contributors: S. Sekimoto, K. Shinozaki, Y. Murase, Y. Kusaka, K. Kojima, W. Tsugawa, K. Sode

Source: ORCID
Added: October 9, 2020

2014 journal article

The development of an autonomous self-powered bio-sensing actuator

Sensors and Actuators B-Chemical, 196, 429–433.

By: T. Hanashi*, T. Yamazaki*, H. Tanaka*, K. Ikebukuro*, W. Tsugawa* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: T. Hanashi*, T. Yamazaki*, H. Tanaka*, K. Ikebukuro*, W. Tsugawa* & K. Sode*

author keywords: Enzyme fuel cell; Autonomous; Sensing actuator; Flavin adenine dinucleotide-dependent glucose dehydrogenase; Self-powered; Drug delivery systems
Source: ORCID
Added: October 9, 2020

2013 journal article

Blood Glucose Dependence on Emotional Behaviors and Body Surface Temperatures in Common Marmoset's Socio-Psychological Learning with Peers - for 'Development of Human-Environment Interface by Sensing and Multivariate Analysis of Bio-Ecosystem'

Bioengineering Based on Electrochemistry, 50(28), 9–14.

By: M. Koshiba*, A. Senoo, G. Karino*, Y. Shirakawa*, K. Mimura*, T. Sagawa*, W. Tsugawa*, K. Sode*, S. Nakamura*

co-author countries: Japan 🇯🇵

Contributors: M. Koshiba*, A. Senoo, G. Karino*, Y. Shirakawa*, K. Mimura*, T. Sagawa*, W. Tsugawa*, K. Sode*, S. Nakamura*

Source: ORCID
Added: October 9, 2020

2013 journal article

Cloning and Characterization of Fructosamine-6-Kinase from Arthrobacter aurescens

Applied Biochemistry and Biotechnology, 170(3), 710–717.

By: A. Sakaguchi-Mikami*, M. Kameya*, S. Ferri*, W. Tsugawa* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: A. Sakaguchi-Mikami*, M. Kameya*, S. Ferri*, W. Tsugawa* & K. Sode*

author keywords: Glycation; Amadori products; Arthrobacter; epsilon-Fructosyl lysine (epsilon-FK); Fructosamine-6-kinase (FN6K)
MeSH headings : Amino Acid Sequence; Arthrobacter / enzymology; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Cloning, Molecular; Escherichia coli / genetics; Lysine / analogs & derivatives; Lysine / metabolism; Molecular Sequence Data; Phosphotransferases (Alcohol Group Acceptor) / genetics; Phosphotransferases (Alcohol Group Acceptor) / metabolism; Sequence Alignment; Substrate Specificity
Source: ORCID
Added: October 9, 2020

2013 journal article

Direct electron transfer type disposable sensor strip for glucose sensing employing an engineered FAD glucose dehydrogenase

Enzyme and Microbial Technology, 52(2), 123–128.

By: Y. Yamashita*, S. Ferri*, M. Huynh*, H. Shimizu*, H. Yamaoka* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: Y. Yamashita*, S. Ferri*, M. Huynh*, H. Shimizu*, H. Yamaoka* & K. Sode*

author keywords: Diabetes; Glucose dehydrogenase; Glucose sensor; SMBG; Substrate specificity; Direct electron transfer
MeSH headings : Amino Acid Sequence; Amino Acid Substitution; Aspergillus niger / enzymology; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Biosensing Techniques; Blood Glucose / analysis; Blood Glucose Self-Monitoring / instrumentation; Blood Glucose Self-Monitoring / methods; Burkholderia cepacia / enzymology; Burkholderia cepacia / genetics; Catalytic Domain; Computer Simulation; Electrochemical Techniques; Electron Transport; Escherichia coli; Flavin-Adenine Dinucleotide / metabolism; Fungal Proteins / metabolism; Glucose / metabolism; Glucose 1-Dehydrogenase / genetics; Glucose 1-Dehydrogenase / metabolism; Glucose Dehydrogenases / metabolism; Glucose Oxidase / metabolism; Humans; Maltose / metabolism; Models, Molecular; Molecular Sequence Data; Mutagenesis, Site-Directed; Protein Binding; Protein Conformation; Reagent Strips; Recombinant Proteins / metabolism; Sensitivity and Specificity; Substrate Specificity
Source: ORCID
Added: October 9, 2020

2013 journal article

Engineering Fructosyl Peptide Oxidase to Improve Activity Toward the Fructosyl Hexapeptide Standard for HbA1c Measurement

Molecular Biotechnology, 54(3), 939–943.

By: S. Ferri*, Y. Miyamoto*, A. Sakaguchi-Mikami*, W. Tsugawa* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: S. Ferri*, Y. Miyamoto*, A. Sakaguchi-Mikami*, W. Tsugawa* & K. Sode*

author keywords: Fructosyl peptide oxidase; Hemoglobin A1c; Glycated hemoglobin; Substrate specificity; Protein engineering; Dehydrogenase; Oxidase; Diabetes monitoring
MeSH headings : Amino Acid Oxidoreductases / chemistry; Amino Acid Oxidoreductases / genetics; Amino Acid Oxidoreductases / metabolism; Amino Acid Sequence; Ascomycota / enzymology; Ascomycota / genetics; Fungal Proteins / chemistry; Fungal Proteins / genetics; Fungal Proteins / metabolism; Glycated Hemoglobin; Glycopeptides / chemistry; Glycopeptides / metabolism; Models, Molecular; Molecular Sequence Data; Mutation; Oligopeptides / chemistry; Oligopeptides / metabolism; Protein Engineering / methods; Recombinant Proteins / chemistry; Recombinant Proteins / genetics; Recombinant Proteins / metabolism; Reference Standards; Substrate Specificity
Source: ORCID
Added: October 9, 2020

2013 journal article

Identification and functional analysis of fructosyl amino acid-binding protein from Gram-positive bacterium Arthrobacter sp.

Journal of Applied Microbiology, 114(5), 1449–1456.

By: A. Sakaguchi-Mikami*, S. Ferri*, S. Katayama*, W. Tsugawa* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: A. Sakaguchi-Mikami*, S. Ferri*, S. Katayama*, W. Tsugawa* & K. Sode*

author keywords: Arthrobacter; fructosyl amino acid-binding protein; fructosyl amino acid; glycation; Gram-positive bacteria; Substrate-binding proteins
MeSH headings : Amino Acid Sequence; Arthrobacter / genetics; Arthrobacter / metabolism; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Fatty Acids / metabolism; Fructosamine / metabolism; Ligands; Lipoproteins / genetics; Lipoproteins / metabolism; Membrane Proteins / genetics; Membrane Proteins / metabolism; Molecular Sequence Data; Protein Sorting Signals; Sequence Homology, Amino Acid; Substrate Specificity
Source: ORCID
Added: October 9, 2020

2013 journal article

Mutational analysis of the oxygen-binding site of cholesterol oxidase and its impact on dye-mediated dehydrogenase activity

Journal of Molecular Catalysis B-Enzymatic, 88, 41–46.

By: K. Kojima*, T. Kobayashi*, W. Tsugawa*, S. Ferri* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: K. Kojima*, T. Kobayashi*, W. Tsugawa*, S. Ferri* & K. Sode*

author keywords: Cholesterol dehydrogenase; Cholesterol oxidase; FAD; Site-directed mutagenesis
Source: ORCID
Added: October 9, 2020

2013 journal article

Partial Peptide of alpha-Synuclein Modified with Small-Molecule Inhibitors Specifically Inhibits Amyloid Fibrillation of alpha-Synuclein

International Journal of Molecular Sciences, 14(2), 2590–2600.

By: W. Yoshida*, N. Kobayashi*, Y. Sasaki*, K. Ikebukuro* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: W. Yoshida*, N. Kobayashi*, Y. Sasaki*, K. Ikebukuro* & K. Sode*

author keywords: alpha-synuclein; amyloid beta; pyrroloquinoline quinone; Baicalein; EGCG
Source: ORCID
Added: October 9, 2020

2013 journal article

Rapid Cytotoxicity Screening Platform for Amyloid Inhibitors Using a Membrane-Potential Sensitive Fluorescent Probe

Analytical Chemistry, 85(1), 185–192.

By: J. Kim*, Y. Sasaki*, W. Yoshida*, N. Kobayashi*, A. Veloso*, K. Kerman*, K. Ikebukuro*, K. Sode*

co-author countries: Canada 🇨🇦 Japan 🇯🇵

Contributors: J. Kim*, Y. Sasaki*, W. Yoshida*, N. Kobayashi*, A. Veloso*, K. Kerman*, K. Ikebukuro*, K. Sode*

MeSH headings : Amyloid beta-Peptides / antagonists & inhibitors; Amyloid beta-Peptides / genetics; Amyloid beta-Peptides / metabolism; Antioxidants / chemistry; Barbiturates / chemistry; Biosensing Techniques; Catechin / analogs & derivatives; Catechin / chemistry; Cell Line, Tumor; Cell Survival / drug effects; Flavanones / chemistry; Fluorescent Dyes / chemistry; Humans; Isoxazoles / chemistry; Peptide Fragments / antagonists & inhibitors; Peptide Fragments / genetics; Peptide Fragments / metabolism; Recombinant Proteins / antagonists & inhibitors; Recombinant Proteins / biosynthesis; Recombinant Proteins / toxicity; Thiobarbiturates / chemistry; alpha-Synuclein / antagonists & inhibitors; alpha-Synuclein / genetics; alpha-Synuclein / metabolism
Source: ORCID
Added: October 9, 2020

2013 journal article

Screening of Peptide Ligands for Pyrroloquinoline Quinone Glucose Dehydrogenase Using Antagonistic Template-Based Biopanning

International Journal of Molecular Sciences, 14(12), 23244–23256.

By: K. Abe*, W. Yoshida*, K. Terada*, Y. Yagi-Ishii*, S. Ferri*, K. Ikebukuro*, K. Sode*

co-author countries: Japan 🇯🇵

Contributors: K. Abe*, W. Yoshida*, K. Terada*, Y. Yagi-Ishii*, S. Ferri*, K. Ikebukuro*, K. Sode*

author keywords: peptide ligand; phage display; site-directed; inhibitor
MeSH headings : Amino Acid Sequence; Binding Sites; Glucose Dehydrogenases / antagonists & inhibitors; Glucose Dehydrogenases / genetics; Glucose Dehydrogenases / metabolism; Kinetics; Ligands; Mutagenesis, Site-Directed; Peptide Library; Peptides / chemical synthesis; Peptides / chemistry; Peptides / metabolism; Protein Structure, Tertiary; Substrate Specificity
Source: ORCID
Added: October 9, 2020

2013 journal article

Substrate specificity engineering of Escherichia coli derived fructosamine 6-kinase

Biotechnology Letters, 35(2), 253–258.

By: K. Kojima*, A. Mikami-Sakaguchi*, M. Kameya*, Y. Miyamoto*, S. Ferri*, W. Tsugawa*, K. Sode*

co-author countries: Japan 🇯🇵

Contributors: K. Kojima*, A. Mikami-Sakaguchi*, M. Kameya*, Y. Miyamoto*, S. Ferri*, W. Tsugawa*, K. Sode*

author keywords: Fructosamine 6-kinase; Fructosyl-valine; Site-directed mutagenesis; Substrate specificity
MeSH headings : Amino Acid Substitution; Catalytic Domain; Escherichia coli / enzymology; Fructosamine / metabolism; Lysine / analogs & derivatives; Lysine / metabolism; Metabolic Engineering; Models, Molecular; Mutagenesis, Site-Directed; Mutant Proteins / genetics; Mutant Proteins / metabolism; Phosphotransferases / genetics; Phosphotransferases / metabolism; Protein Engineering; Substrate Specificity; Valine / analogs & derivatives; Valine / metabolism
Source: ORCID
Added: October 9, 2020

2012 journal article

BioLC-Oscillator: A Self-Powered Wireless Glucose-Sensing System with the Glucose Dependent Resonance Frequency

Electrochemistry, 80(5), 367–370.

By: T. Hanashi*, T. Yamazaki*, W. Tsugawa*, K. Ikebukuro* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: T. Hanashi*, T. Yamazaki*, W. Tsugawa*, K. Ikebukuro* & K. Sode*

author keywords: BioCapacitor; Continuous Glucose Monitoring; Glucose Dehydrogenase; Wireless Sensing System
Source: ORCID
Added: October 9, 2020

2012 journal article

Biomolecular Engineering of Biosensing Molecules - The Challenges in Creating Sensing Molecules for Glycated Protein Biosensing

Electrochemistry, 80(5), 293–298.

By: S. Ferri* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: S. Ferri* & K. Sode*

author keywords: Biomolecular Engineering; Biosensing; Glycated Proteins; Fructosyl Peptide Oxidase
Source: ORCID
Added: October 9, 2020

2012 journal article

Construction of Mutant Glucose Oxidases with Increased Dye-Mediated Dehydrogenase Activity

International Journal of Molecular Sciences, 13(11), 14149–14157.

By: Y. Horaguchi*, S. Saito*, K. Kojima*, W. Tsugawa*, S. Ferri* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: Y. Horaguchi*, S. Saito*, K. Kojima*, W. Tsugawa*, S. Ferri* & K. Sode*

author keywords: glucose oxidase; glucose dehydrogenase; FAD; oxygen; site directed mutagenesis
MeSH headings : Amino Acid Substitution; Coloring Agents / chemistry; Coloring Agents / metabolism; Glucose Oxidase / chemistry; Glucose Oxidase / genetics; Glucose Oxidase / metabolism; Kinetics; Models, Molecular; Molecular Conformation; Mutation; Oxidation-Reduction; Oxidoreductases / chemistry; Oxidoreductases / metabolism; Oxygen / chemistry; Oxygen / metabolism; Substrate Specificity
Source: ORCID
Added: October 9, 2020

2012 journal article

Construction of engineered fructosyl peptidyl oxidase for enzyme sensor applications under normal atmospheric conditions

Biotechnology Letters, 34(3), 491–497.

By: S. Kim*, E. Nibe*, W. Tsugawa*, K. Kojima*, S. Ferri* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: S. Kim*, E. Nibe*, W. Tsugawa*, K. Kojima*, S. Ferri* & K. Sode*

author keywords: Biosensor; Dehydrogenase; Diabetes; Fructosyl peptidyl oxidase (FPOX); Glycated protein; HbA1c
MeSH headings : Amino Acid Oxidoreductases / genetics; Amino Acid Oxidoreductases / metabolism; Ascomycota / enzymology; Biosensing Techniques / methods; Glycated Hemoglobin / analysis; Recombinant Proteins / genetics; Recombinant Proteins / metabolism
Source: ORCID
Added: October 9, 2020

2012 journal article

Detection of Pathogenic Bacteria by Using Zinc Finger Protein Fused with Firefly Luciferase

Analytical Chemistry, 84(18), 8028–8032.

By: K. Abe*, T. Kumagai*, C. Takahashi*, A. Kezuka*, Y. Murakami*, Y. Osawa*, H. Motoki*, T. Matsuo* ...

co-author countries: Japan 🇯🇵

Contributors: K. Abe*, T. Kumagai*, C. Takahashi*, A. Kezuka*, Y. Murakami*, Y. Osawa*, H. Motoki*, T. Matsuo* ...

MeSH headings : Binding Sites; DNA, Bacterial / analysis; Early Growth Response Protein 1 / genetics; Early Growth Response Protein 1 / metabolism; Escherichia coli / genetics; Escherichia coli / isolation & purification; Legionella pneumophila / genetics; Legionella pneumophila / isolation & purification; Luciferases, Firefly / genetics; Luciferases, Firefly / metabolism; Polymerase Chain Reaction; Recombinant Fusion Proteins / genetics; Recombinant Fusion Proteins / metabolism; Sp1 Transcription Factor / genetics; Sp1 Transcription Factor / metabolism; Zinc Fingers / genetics
Source: ORCID
Added: October 9, 2020

2012 journal article

Electrochemical SNP Detection Using Glucose Dehydrogenase

Electrochemistry, 80(5), 345–347.

By: K. Abe*, C. Kiyohara*, Y. Saito*, K. Sode* & K. Ikebukuro*

co-author countries: Japan 🇯🇵

Contributors: K. Abe*, C. Kiyohara*, Y. Saito*, K. Sode* & K. Ikebukuro*

author keywords: Single Nucleotide Polymorphism; Glucose Dehydrogenase; Single Base Extension
Source: ORCID
Added: October 9, 2020

2012 journal article

Nitrous Oxide Sensing using Oxygen-Insensitive Direct-Electron-Transfer-Type Nitrous Oxide Reductase

Electrochemistry, 80(5), 371–374.

By: W. Tsugawa*, H. Shimizu*, M. Tatara*, Y. Ueno*, K. Kojima* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: W. Tsugawa*, H. Shimizu*, M. Tatara*, Y. Ueno*, K. Kojima* & K. Sode*

author keywords: Nitrous Oxide; Nitrous Oxide Reductase; Direct Electron Transfer; Cytochrome c
Source: ORCID
Added: October 9, 2020

2012 journal article

Selection of DNA Aptamers That Recognize alpha-Synuclein Oligomers Using a Competitive Screening Method

Analytical Chemistry, 84(13), 5542–5547.

co-author countries: Japan 🇯🇵

Contributors: K. Tsukakoshi*, K. Abe*, K. Sode* & K. Ikebukuro*

MeSH headings : Alzheimer Disease / metabolism; Amyloid / chemistry; Amyloid / metabolism; Aptamers, Nucleotide / chemistry; Aptamers, Nucleotide / metabolism; Base Sequence; Binding, Competitive; Gene Library; Humans; Parkinson Disease / metabolism; Protein Binding; Protein Structure, Secondary; SELEX Aptamer Technique; alpha-Synuclein / chemistry; alpha-Synuclein / metabolism
Source: ORCID
Added: October 9, 2020

2012 journal article

Structural Basis of Efficient Electron Transport between Photosynthetic Membrane Proteins and Plastocyanin in Spinach Revealed Using Nuclear Magnetic Resonance

Plant Cell, 24(10), 4173–4186.

By: T. Ueda*, N. Nomoto*, M. Koga*, H. Ogasa*, Y. Ogawa*, M. Matsumoto*, P. Stampoulis*, K. Sode*, H. Terasawa*, I. Shimada*

co-author countries: Japan 🇯🇵

Contributors: T. Ueda*, N. Nomoto*, M. Koga*, H. Ogasa*, Y. Ogawa*, M. Matsumoto*, P. Stampoulis*, K. Sode*, H. Terasawa*, I. Shimada*

MeSH headings : Cytochrome b6f Complex / metabolism; Electron Transport; Hydrophobic and Hydrophilic Interactions; Magnetic Resonance Spectroscopy; Membrane Proteins / chemistry; Membrane Proteins / metabolism; Molecular Sequence Data; Photosynthesis; Photosystem I Protein Complex / metabolism; Plastocyanin / chemistry; Plastocyanin / metabolism; Spinacia oleracea / metabolism
Source: ORCID
Added: October 9, 2020

2011 journal article

Aptameric sensors based on structural change for diagnosis

Faraday Discussions, 149, 93–105.

co-author countries: Japan 🇯🇵
MeSH headings : Aptamers, Nucleotide / chemistry; Base Sequence; Biomarkers / analysis; Biosensing Techniques / methods; Circular Dichroism / methods; Electrophoretic Mobility Shift Assay / methods; Humans; Molecular Sequence Data; Nucleic Acid Conformation; Surface Plasmon Resonance / methods; Thrombin / analysis
Source: ORCID
Added: October 9, 2020

2011 journal article

Aptameric sensors based on structural change for diagnosis (vol 149, pg 93, 2011)

Faraday Discussions, 149, 106. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000285924900009&KeyUID=WOS:000285924900009

By: K. Abe, D. Ogasawara, W. Yoshida, K. Sode & K. Ikebukuro

Contributors: K. Abe, D. Ogasawara, W. Yoshida, K. Sode & K. Ikebukuro

Source: ORCID
Added: October 9, 2020

2011 journal article

BioRadioTransmitter: A self-powered wireless glucose-sensing system

Journal of Diabetes Science and Technology, 5(5), 1030–1035.

By: T. Hanashi*, T. Yamazaki*, W. Tsugawa*, K. Ikebukuro* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: T. Hanashi*, T. Yamazaki*, W. Tsugawa*, K. Ikebukuro* & K. Sode*

MeSH headings : Biosensing Techniques / instrumentation; Blood Glucose / analysis; Equipment Design; Glucose / analysis; Transducers
Source: ORCID
Added: October 9, 2020

2011 journal article

Construction of a Novel Glucose-Sensing Molecule Based on a Substrate-Binding Protein for Intracellular Sensing

Biotechnology and Bioengineering, 108(4), 725–733.

By: A. Sakaguchi-Mikami*, A. Taniguchi*, K. Sode* & T. Yamazaki*

co-author countries: Japan 🇯🇵

Contributors: A. Sakaguchi-Mikami*, A. Taniguchi*, K. Sode* & T. Yamazaki*

author keywords: intracellular sensing; gene regulation; transcriptional regulator; lactose repressor (LacI); substrate-binding proteins (SBPs); glucose-/galactose-binding protein (GBP)
MeSH headings : Animals; Carrier Proteins / genetics; Carrier Proteins / metabolism; DNA / metabolism; Escherichia coli / genetics; Escherichia coli Proteins / genetics; Escherichia coli Proteins / metabolism; Gene Expression Regulation; Genes, Reporter; Glucose / analysis; Glucose / metabolism; Hep G2 Cells; Humans; Lac Repressors / genetics; Lac Repressors / metabolism; Mice; Models, Molecular; NIH 3T3 Cells; Recombinant Proteins / genetics; Recombinant Proteins / metabolism; Transcription, Genetic; Transfection
Source: ORCID
Added: October 9, 2020

2011 journal article

Development of a novel biosensing system based on the structural change of a polymerized guanine-quadruplex DNA nanostructure

Biosensors & Bioelectronics, 26(12), 4837–4841.

co-author countries: Japan 🇯🇵

Contributors: Y. Morita*, W. Yoshida*, N. Savory*, S. Han*, M. Tera*, K. Nagasawa*, C. Nakamura*, K. Sode*, K. Ikebukuro*

author keywords: Aptamers; FADGDH; G-quadruplexes; Nanostructures; Biosensors; Enzymes
MeSH headings : Adenosine / analysis; Aptamers, Nucleotide / chemistry; Aptamers, Nucleotide / metabolism; Biosensing Techniques / methods; G-Quadruplexes; Glucose 1-Dehydrogenase / metabolism; Guanine / chemistry; Nanostructures / chemistry; Nanostructures / ultrastructure; Polymerization
Source: ORCID
Added: October 9, 2020

2011 conference paper

ECS Transactions: Preface

ECS Transactions, 35(7). http://www.scopus.com/inward/record.url?eid=2-s2.0-79960806989&partnerID=MN8TOARS

By: M. Madou, A. Hoff, D. Landheer, L. Nagahara, K. Sode, T. Thundat, C. Wang

Contributors: M. Madou, A. Hoff, D. Landheer, L. Nagahara, K. Sode, T. Thundat, C. Wang

Source: ORCID
Added: October 9, 2020

2011 journal article

Effect of time of cutting and maceration on forage composition, nutrient flow, microbial protein synthesis, and digestibility in dual-flow continuous culture

Canadian Journal of Animal Science, 91(3), 486–487. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000294744800042&KeyUID=WOS:000294744800042

By: C. Kokko, K. Sode, A. Brito, R. Hovey & R. Berthiaume

Contributors: C. Kokko, K. Sode, A. Brito, R. Hovey & R. Berthiaume

Source: ORCID
Added: October 9, 2020

2011 journal article

Glucose Specific GDH-PQQ based Sensor Strip: Application of Engineered GDH-PQQ Harboring a de novo Designed Loop Region

Bioelectronics, Biointerfaces, and Biomedical Applications 4, 35(7), 117–119.

By: D. Nagae, M. Nakajima, S. Ferri & K. Sode*

Contributors: D. Nagae, M. Nakajima, S. Ferri & K. Sode*

Source: ORCID
Added: October 9, 2020

2011 journal article

Hemoglobin A1c biosensors

Japanese Journal of Clinical Chemistry, 40(4), 304–311. http://www.scopus.com/inward/record.url?eid=2-s2.0-82155186699&partnerID=MN8TOARS

By: A. Sakaguchi-Mikami, S. Ferri, W. Tsugawa & K. Sode

Contributors: A. Sakaguchi-Mikami, S. Ferri, W. Tsugawa & K. Sode

Source: ORCID
Added: October 9, 2020

2011 journal article

Review of glucose oxidases and glucose dehydrogenases: A bird's eye view of glucose sensing enzymes

Journal of Diabetes Science and Technology, 5(5), 1068–1076.

By: S. Ferri*, K. Kojima* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: S. Ferri*, K. Kojima* & K. Sode*

MeSH headings : Glucose 1-Dehydrogenase / metabolism; Glucose Oxidase / metabolism; Humans; Oxidation-Reduction; Substrate Specificity
Source: ORCID
Added: October 9, 2020

2011 journal article

Screening of Aspergillus-derived FAD-glucose dehydrogenases from fungal genome database

Biotechnology Letters, 33(11), 2255–2263.

By: K. Mori*, M. Nakajima*, K. Kojima*, K. Murakami*, S. Ferri* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: K. Mori*, M. Nakajima*, K. Kojima*, K. Murakami*, S. Ferri* & K. Sode*

author keywords: Aspergillus; FAD; Glucose dehydrogenase; 3D structure
MeSH headings : Amino Acid Motifs; Aspergillus niger / enzymology; Aspergillus niger / genetics; Cloning, Molecular; Coenzymes / metabolism; Computational Biology; Escherichia coli / genetics; Flavin-Adenine Dinucleotide / metabolism; Gene Expression; Genome, Fungal; Glucose Dehydrogenases / genetics; Glucose Dehydrogenases / metabolism; Models, Molecular; Penicillium / enzymology; Penicillium / genetics; Phylogeny; Protein Conformation; Sequence Homology, Amino Acid
Source: ORCID
Added: October 9, 2020

2011 journal article

Tuning Fructosyl Peptidyl Oxidase into Dehydrogenase and Its Application for the Construction of an Enzyme Electrode

Bioelectronics, Biointerfaces, and Biomedical Applications 4, 35(7), 113–116.

By: S. Ferri*, E. Nibe*, Y. Miyamoto*, S. Kim*, W. Tsugawa* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: S. Ferri*, E. Nibe*, Y. Miyamoto*, S. Kim*, W. Tsugawa* & K. Sode*

Source: ORCID
Added: October 9, 2020

2010 journal article

Amino acid substitution at the substrate-binding subsite alters the specificity of the Phanerochaete chrysosporium cellobiose dehydrogenase

Biochemical and Biophysical Research Communications, 391(2), 1246–1250.

By: Desriani, S. Ferri* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: Desriani, S. Ferri* & K. Sode*

author keywords: Cellobiose dehydrogenase; Cellobiose; Lactose; Phanerochaete chrysosporium
MeSH headings : Amino Acid Substitution; Binding Sites / genetics; Carbohydrate Dehydrogenases / chemistry; Carbohydrate Dehydrogenases / genetics; Carbohydrate Dehydrogenases / metabolism; Flavins / metabolism; Lactose / metabolism; Phanerochaete / enzymology; Protein Structure, Tertiary; Substrate Specificity / genetics
Source: ORCID
Added: October 9, 2020

2010 journal article

Constructing an improved pyrroloquinoline quinone glucose dehydrogenase binding aptamer for enzyme labeling

Biotechnology Letters, 32(9), 1293–1298.

By: K. Abe*, K. Sode* & K. Ikebukuro*

co-author countries: Japan 🇯🇵

Contributors: K. Abe*, K. Sode* & K. Ikebukuro*

author keywords: DNA aptamer; Electrochemical biosensors; Pyrroloquinoline quinone-dependent glucose dehydrogenase; G-quadruplex
MeSH headings : Aptamers, Nucleotide / metabolism; Glucose Dehydrogenases / metabolism; Protein Binding; Staining and Labeling / methods
Source: ORCID
Added: October 9, 2020

2010 journal article

Engineering of dye-mediated dehydrogenase property of fructosyl amino acid oxidases by site-directed mutagenesis studies of its putative proton relay system

Biotechnology Letters, 32(8), 1123–1129.

By: S. Kim*, E. Nibe*, S. Ferri*, W. Tsugawa* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: S. Kim*, E. Nibe*, S. Ferri*, W. Tsugawa* & K. Sode*

author keywords: Biosensor; Dehydrogenase; Flavoprotein; Fructosyl amino acid oxidase (FAOD); Glycated protein; Proton relay system (PRS)
MeSH headings : Amino Acid Oxidoreductases / chemistry; Amino Acid Oxidoreductases / genetics; Amino Acid Oxidoreductases / metabolism; Amino Acid Sequence; Aspergillus / enzymology; Cloning, Molecular; Crystallography, X-Ray; Electrophoresis, Polyacrylamide Gel; Models, Molecular; Molecular Sequence Data; Mutagenesis, Site-Directed; Oxidoreductases / chemistry; Oxidoreductases / genetics; Oxidoreductases / metabolism; Pichia / enzymology; Protons
Source: ORCID
Added: October 9, 2020

2010 journal article

Functional expression of Phanerochaete chrysosporium cellobiose dehydrogenase flavin domain in Escherichia coli

Biotechnology Letters, 32(6), 855–859.

By: Desriani, S. Ferri* & K. Sode*

co-author countries: Japan 🇯🇵

Contributors: Desriani, S. Ferri* & K. Sode*

author keywords: Cellobiose; Cellobiose dehydrogenase; Flavin domain; Phanerochaete chrysosporium
MeSH headings : Carbohydrate Dehydrogenases / biosynthesis; Carbohydrate Dehydrogenases / genetics; Cellobiose / metabolism; Enzyme Stability; Escherichia coli / genetics; Escherichia coli / metabolism; Gene Expression; Hydrogen-Ion Concentration; Phanerochaete / enzymology; Phanerochaete / genetics; Pichia / genetics; Pichia / metabolism; Protein Structure, Tertiary; Recombinant Proteins / biosynthesis; Recombinant Proteins / genetics
Source: ORCID
Added: October 9, 2020

2010 journal article

Motif-Based Search for a Novel Fructosyl Peptide Oxidase From Genome Databases

Biotechnology and Bioengineering, 106(3), 358–366.

By: S. Kim*, S. Ferri*, W. Tsugawa*, K. Mori* & K. Sode*

co-author countries: Japan 🇯🇵 United States of America 🇺🇸

Contributors: S. Kim*, S. Ferri*, W. Tsugawa*, K. Mori* & K. Sode*

author keywords: biosensor; diabetes; hemoglobin Alc (HbA1c); fructosyl amino acid oxidase (FAOD); fructosyl peptide oxidase (FPOX)
MeSH headings : Amino Acid Motifs; Amino Acid Oxidoreductases / genetics; Amino Acid Oxidoreductases / metabolism; Amino Acid Sequence; Ascomycota / enzymology; Ascomycota / genetics; Base Sequence; Cloning, Molecular; Computational Biology / methods; Databases, Nucleic Acid; Escherichia coli; Fungal Proteins / genetics; Genome, Fungal; Kinetics; Models, Molecular; Molecular Sequence Data; Mutagenesis, Site-Directed; Protein Structure, Tertiary; Recombinant Proteins / genetics; Recombinant Proteins / isolation & purification; Recombinant Proteins / metabolism; Sequence Alignment; Substrate Specificity
Source: ORCID
Added: October 9, 2020

2010 journal article