Lisa Van den Broeck

Functional annotation of proteins for signaling network inference in non-model species

NATURE COMMUNICATIONS, 14(1).

The ALOG family members OsG1L1 and OsG1L2 regulate inflorescence branching in rice

Beretta, V. M., Franchini, E., Din, I. U., Lacchini, E., Broeck, L., Sozzani, R., … Kater, M. M. (2023, April 21). PLANT JOURNAL, Vol. 4.

Establishing a reproducible approach for the controllable deposition and maintenance of plants cells with 3D bioprinting

Broeck, L. V., Schwartz, M. F., Krishnamoorthy, S., Spurney, R. J., Tahir, M. A., Melvin, C., … Sozzani, R. (2022, March 27). (Vol. 3). Vol. 3.

Establishing a reproducible approach to study cellular functions of plant cells with 3D bioprinting

Science Advances.

Gene regulatory networks for compatible versus incompatible grafts identify a role for SlWOX4 during junction formation

PLANT CELL, 34(1), 535–556.

A hybrid model connecting regulatory interactions with stem cell divisions in the root

Quantitative Plant Biology, 2.

Analysis of the transcriptomic, metabolomic, and gene regulatory responses to Puccinia sorghi in maize

Molecular Plant Pathology, 22(4), 465–479.

Gene regulatory networks for compatible versus incompatible grafts identify a role for SlWOX4 during junction formation

Thomas, H., Broeck, L. V., Spurney, R., Sozzani, R., & Frank, M. (2021, February 27). (Vol. 2). Vol. 2.

The ALOG family members OsG1L1 and OsG1L2 regulate inflorescence branching in rice

Franchini, E., Beretta, V. M., Din, I. U., Lacchini, E., Broeck, L. V., Sozzani, R., … Kater, M. M. (2021, May 3). (Vol. 5). Vol. 5.

Tissue Regeneration with Hydrogel Encapsulation: A Review of Developments in Plants and Animals

BioDesign Research.

Accessing Legacy Phosphorus in Soils

Soil Systems, 4(4), 74.

Gene Regulatory Network Inference: Connecting Plant Biology and Mathematical Modeling

Frontiers in Genetics, 11.

Novel Imaging Modalities Shedding Light on Plant Biology: Start Small and Grow Big

Annual Review of Plant Biology, 71(1), 789–816.

Protein complex stoichiometry and expression dynamics of transcription factors modulate stem cell division

Proceedings of the National Academy of Sciences, 117(26), 15332–15342.

tuxnet: a simple interface to process RNA sequencing data and infer gene regulatory networks

PLANT JOURNAL, 101(3), 716–730.

Early mannitol-triggered changes in the Arabidopsis leaf (phospho)proteome reveal growth regulators.

Journal of Experimental Botany, 8.

The Pivotal Role of Ethylene in Plant Growth.

Trends in Plant Science, 4.

E-MTAB-6205 - The expression profiles of 31 transcription factors in wild-type Col-0 plants upon mild osmotic stress, including 10 time points and different leaf tissues

https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-6205

E-MTAB-6209 - The expression profiles of 30 transcription factors in 17 inducible gain-of-function lines after activation of overexpression, including 5 time points

https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-6209

From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress

Molecular Systems Biology, 13(12), 961.

Time of day determines Arabidopsis transcriptome and growth dynamics under mild drought.

Plant, Cell & Environment, 2.

RALFL34 regulates formative cell divisions in Arabidopsis pericycle during lateral root initiation.

Journal of Experimental Botany, 8.

The ETHYLENE RESPONSE FACTORs ERF6 and ERF11 Antagonistically Regulate Mannitol-Induced Growth Inhibition in Arabidopsis.

Plant Physiology, 9.