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J. and Hoffman, G. G. and Gumber, H. K. and Allen, G. C. and Thompson, W. F. and Hanley-Bowdoin, L.}, year={2014}, pages={2747–2756}} @article{pascuzzi_flores-vergara_lee_sosinski_vaughn_hanley-bowdoin_thompson_allen_2014, title={In vivo mapping of Arabidopsis scaffold/matrix attachment regions reveals link to nucleosome-disfavoring poly(dA:dT) tracts}, volume={26}, DOI={10.1105/tpc.113.121194}, number={1}, journal={Plant Cell}, author={Pascuzzi, P. E. and Flores-Vergara, M. A. and Lee, T. J. and Sosinski, B. and Vaughn, M. W. and Hanley-Bowdoin, L. and Thompson, W. F. and Allen, G. C.}, year={2014}, pages={102–120}} @article{shen_dallas_goshe_hanley-bowdoin_2014, title={SnRK1 phosphorylation of AL2 delays cabbage leaf curl virus infection in arabidopsis}, volume={88}, DOI={10.1128/jvi.00761-14}, number={18}, journal={Journal of Virology}, author={Shen, W. and Dallas, M. B. and Goshe, M. 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R.}, year={2011}, pages={9789–9800}} @article{shen_liu_song_xie_hanley-bowdoin_zhou_2011, title={Tomato SlSnRK1 protein interacts with and phosphorylates beta C1, a pathogenesis protein encoded by a geminivirus beta-satellite}, volume={157}, DOI={10.1104/pp.111.184648}, number={3}, journal={Plant Physiology}, author={Shen, Q. T. and Liu, Z. and Song, F. M. and Xie, Q. and Hanley-Bowdoin, L. and Zhou, X. P.}, year={2011}, pages={1394–1406}} @article{lee_pascuzzi_settlage_shultz_tanurdzic_rabinowicz_menges_zheng_main_murray_et al._2010, title={Arabidopsis thaliana chromosome 4 replicates in two phases that correlate with chromatin state}, volume={6}, DOI={10.1371/journal.pgen.1000982}, number={6}, journal={PLoS Genetics}, author={Lee, T. J. and Pascuzzi, P. E. and Settlage, S. B. and Shultz, R. W. and Tanurdzic, M. and Rabinowicz, P. D. and Menges, M. and Zheng, P. and Main, D. and Murray, J. A. 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I. and Hanley-Bowdoin, L.}, year={2009}, pages={996–1005}} @article{shultz_lee_allen_thompson_hanley-bowdoin_2009, title={Dynamic localization of the DNA replication proteins MCM5 and MCM7 in plants}, volume={150}, DOI={10.1104/pp.109.136614}, number={2}, journal={Plant Physiology}, author={Shultz, R. W. and Lee, T. J. and Allen, G. C. and Thompson, W. F. and Hanley-Bowdoin, L.}, year={2009}, pages={658–669}} @misc{ascencio-ibanez_sozzani_lee_chu_wolfinger_cella_hanley-bowdoin_2008, title={Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection}, volume={148}, number={1}, journal={Plant Physiology}, author={Ascencio-Ibanez, J. T. and Sozzani, R. and Lee, T. J. and Chu, T. M. and Wolfinger, R. D. and Cella, R. and Hanley-Bowdoin, L.}, year={2008}, pages={436–454}} @article{jordan_shen_hanley-bowdoin_robertson_2007, title={Geminivirus-induced gene silencing of the tobacco retinoblastoma-related gene results in cell death and altered development}, volume={65}, DOI={10.1007/s11103-007-9206-3}, number={1-2}, journal={Plant Molecular Biology}, author={Jordan, C. V. and Shen, W. and Hanley-Bowdoin, L. K. and Robertson, D.}, year={2007}, pages={163–175}} @misc{shultz_tatineni_hanley-bowdoin_thompson_2007, title={Genome-wide analysis of the core DNA replication machinery in the higher plants Arabidopsis and rice(1[W][OA])}, volume={144}, number={4}, journal={Plant Physiology}, author={Shultz, R. W. and Tatineni, V. M. and Hanley-Bowdoin, L. and Thompson, W. F.}, year={2007}, pages={1697–1714}} @article{arguello-astorga_ascencio-ibanez_dallas_orozco_hanley-bowdoin_2007, title={High-frequency reversion of geminivirus replication protein mutants during infection}, volume={81}, DOI={10.1128/JVI.00925-07}, number={20}, journal={Journal of Virology}, author={Arguello-Astorga, G. and Ascencio-Ibanez, J. T. and Dallas, M. B. and Orozco, B. M. and Hanley-Bowdoin, L.}, year={2007}, pages={11005–11015}} @article{shen_hanley-bowdoin_2006, title={Geminivirus infection up-regulates the expression of two Arabidopsis protein kinases related to yeast SNF1-and mammalian AMPK-activating kinases}, volume={142}, DOI={10.1104/pp.106.088476}, number={4}, journal={Plant Physiology}, author={Shen, W. and Hanley-Bowdoin, L.}, year={2006}, pages={1642–1655}} @article{lopez-ochoa_ramirez-prado_hanley-bowdoin_2006, title={Peptide aptamers that bind to a geminivirus replication protein interfere with viral replication in plant cells}, volume={80}, DOI={10.1128/JVI.02698-05}, number={12}, journal={Journal of Virology}, author={Lopez-Ochoa, L. and Ramirez-Prado, J. and Hanley-Bowdoin, L.}, year={2006}, pages={5841–5853}} @article{shultz_settlage_hanley-bowdoin_thompson_2005, title={A trichloroacetic acid-acetone method greatly reduces infrared autofluorescence of protein extracts from plant tissue}, volume={23}, DOI={10.1007/BF02788888}, number={4}, journal={Plant Molecular Biology Reporter}, author={Shultz, R. W. and Settlage, S. B. and Hanley-Bowdoin, L. and Thompson, W. F.}, year={2005}, pages={405–409}} @article{settlage_see_hanley-bowdoin_2005, title={Geminivirus C3 protein: Replication enhancement and protein interactions}, volume={79}, DOI={10.1128/jvi.79.15.9885-9895.2005}, number={15}, journal={Journal of Virology}, author={Settlage, S. B. and See, R. G. and Hanley-Bowdoin, L.}, year={2005}, pages={9885–9895}} @article{arguello-astorga_lopez-ochoa_kong_orozco_settlage_hanley-bowdoin_2004, title={A novel motif in geminivirus replication proteins interacts with the plant retinoblastoma-related protein}, volume={78}, DOI={10.1128/JVI.78.9.4817-4826.2004}, number={9}, journal={Journal of Virology}, author={Arguello-Astorga, G. and Lopez-Ochoa, L. and Kong, L. J. and Orozco, B. M. and Settlage, S. B. and Hanley-Bowdoin, L.}, year={2004}, pages={4817–4826}} @article{lee_shultz_hanley-bowdoin_thompson_2004, title={Establishment of rapidly proliferating rice cell suspension culture and its characterization by fluorescence-activated cell sorting analysis}, volume={22}, DOI={10.1007/BF02773136}, number={3}, journal={Plant Molecular Biology Reporter}, author={Lee, T. J. and Shultz, R. W. and Hanley-Bowdoin, L. and Thompson, W. F.}, year={2004}, pages={259–267}} @misc{hanley-bowdoin_orozco_kong_gruissem_2004, title={Geminivirus resistant transgenic plants}, volume={6,800,793}, number={2004 Oct. 5}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Hanley-Bowdoin, L. and Orozco, B. M. and Kong, L. J. and Gruissem, W.}, year={2004}} @misc{hanley-bowdoin_settlage_2004, title={Geminivirus resistant transgenic plants expressing a mutant geminivirus AL3/C3 coding sequence}, volume={6,747,188}, number={2004 June 8}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Hanley-Bowdoin, L. and Settlage, S.}, year={2004}} @article{castillo_kong_hanley-bowdoin_bejarano_2004, title={Interaction between a geminivirus replication protein and the plant sumoylation system}, volume={78}, DOI={10.1128/JVI.78.6.2758-2769.2004}, number={6}, journal={Journal of Virology}, author={Castillo, A. G. and Kong, L. J. and Hanley-Bowdoin, L. and Bejarano, E. R.}, year={2004}, pages={2758–2769}} @article{hanley-bowdoin_settlage_robertson_2004, title={Reprogramming plant gene expression: A prerequisite to geminivirus DNA replication}, volume={5}, DOI={10.1111/J.1364-3703.2004.00214.X}, number={2}, journal={Molecular Plant Pathology}, author={Hanley-Bowdoin, L. and Settlage, S. B. and Robertson, D.}, year={2004}, pages={149–156}} @article{kong_hanley-bowdoin_2002, title={A geminivirus replication protein interacts with a protein kinase and a motor protein that display different expression patterns during plant development and infection}, volume={14}, ISBN={1040-4651}, DOI={10.1105/tpc.003681}, number={8}, journal={Plant Cell}, author={Kong, L. J. and Hanley-Bowdoin, L.}, year={2002}, pages={1817–1832}} @article{nagar_hanley-bowdoin_robertson_2002, title={Host DNA replication is induced by geminivirus infection of differentiated plant cells}, volume={14}, DOI={10.1105/tpc.005777}, number={12}, journal={Plant Cell}, author={Nagar, S. and Hanley-Bowdoin, L. and Robertson, D.}, year={2002}, pages={2995–3007}} @article{egelkrout_mariconti_settlage_cella_robertson_hanley-bowdoin_2002, title={Two E2F elements regulate the proliferating cell nuclear antigen promoter differently during leaf development}, volume={14}, DOI={10.1105/tpc.006403}, number={12}, journal={Plant Cell}, author={Egelkrout, E. M. and Mariconti, L. and Settlage, S. 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K.}, year={1998}, pages={24448–24456}} @article{orozco_gladfelter_settlage_eagle_gentry_hanley-bowdoin_1998, title={Multiple cis elements contribute to geminivirus origin function}, volume={242}, DOI={10.1006/viro.1997.9013}, number={2}, journal={Virology}, author={Orozco, B. M and Gladfelter, H. J. and Settlage, S. B. and Eagle, P. A. and Gentry, R. N. and Hanley-Bowdoin, L.}, year={1998}, pages={346–356}} @article{eagle_hanley-bowdoin_1997, title={CIS elements that contribute to geminivirus transcriptional regulation and the efficiency of DNA replication}, volume={71}, number={9}, journal={Journal of Virology}, author={Eagle, P. A. and Hanley-Bowdoin, L. K.}, year={1997}, pages={6947–6955}} @article{orozco_miller_settlage_hanley-bowdoin_1997, title={Functional domains of a geminivirus replication protein}, volume={272}, DOI={10.1074/jbc.272.15.9840}, number={15}, journal={Journal of Biological Chemistry}, author={Orozco, B. M. and Miller, A. B. and Settlage, S. B. and Hanley-Bowdoin, L.}, year={1997}, pages={9840–9846}} @article{ach_durfee_miller_taranto_hanley-bowdoin_zambryski_gruissem_1997, title={RRB1 and RRB2 encode maize retinoblastoma-related proteins that interact with a plant D-type cyclin and geminivirus replication protein}, volume={17}, DOI={10.1128/MCB.17.9.5077}, number={9}, journal={Molecular and Cellular Biology}, author={Ach, R. A. and Durfee, T. and Miller, A. B. and Taranto, P. and Hanley-Bowdoin, L. K. and Zambryski, P. C. and Gruissem, W.}, year={1997}, pages={5077–5086}} @article{gladfelter_eagle_fontes_batts_hanley-bowdoin_1997, title={Two domains of the AL1 protein mediate geminivirus origin recognition}, volume={239}, DOI={10.1006/viro.1997.8869}, number={1}, journal={Virology}, author={Gladfelter, H. J. and Eagle, P. A. and Fontes, E. P. B. and Batts, L. and Hanley-Bowdoin, L.}, year={1997}, pages={186–197}}