Michael Goshe

Bingham, J., Hyman, M., Montoya, S., Goshe, M., & Gracieux-Singleton, C. (2023). Identifying the enzyme responsible for initiating aerobic acetylene metabolism in Rhodococcus rhodochrous ATCC 33258. JOURNAL OF BIOLOGICAL CHEMISTRY, Vol. 299, pp. S369–S369. https://doi.org/10.1016/j.jbc.2023.103703

Yamamoto, K. A., Blackburn, K., Goshe, M. B., Brown, D. T., Migoswski, E., Campanhon, I. B., … Soares, M. R. (2023). Tizoxanide Antiviral Activity on Dengue Virus Replication. VIRUSES-BASEL, 15(3). https://doi.org/10.3390/v15030696

Ho, T. C., Blackburn, R. K., Goshe, M. B., & Williamson, J. D. (2021, September 24). Identification of multiple proteins whose interaction with mannitol dehydrogenase is induced by salicylic acid: Implications for unconventional secretion. PROTEOMICS. https://doi.org/10.1002/pmic.202100091

Dinh, P.-U. C., Paudel, D., Brochu, H., Popowski, K. D., Gracieux, M. C., Cores, J., … Cheng, K. (2020). Inhalation of lung spheroid cell secretome and exosomes promotes lung repair in pulmonary fibrosis. NATURE COMMUNICATIONS, 11(1). https://doi.org/10.1038/s41467-020-14344-7

Yamamoto, K. A., Blackburn, K., Migowski, E., Goshe, M. B., Brown, D. T., Ferreira, D. F., & Soares, M. R. (2020). Quantitative proteomic analysis of the tizoxanide effect in vero cells. SCIENTIFIC REPORTS, 10(1). https://doi.org/10.1038/s41598-020-71634-2

Schroeter, E. R., Blackburn, K., Goshe, M. B., & Schweitzer, M. H. (2019). Proteomic method to extract, concentrate, digest and enrich peptides from fossils with coloured (humic) substances for mass spectrometry analyses. ROYAL SOCIETY OPEN SCIENCE, 6(8). https://doi.org/10.1098/rsos.181433

Mathews, S. L., Epps, M. J., Blackburn, R. K., Goshe, M. B., Grunden, A. M., & Dunn, R. R. (2019). Public questions spur the discovery of new bacterial species associated with lignin bioconversion of industrial waste. ROYAL SOCIETY OPEN SCIENCE, 6(3). https://doi.org/10.1098/rsos.180748

Lavoie, R. A., Fazio, A., Blackburn, R. K., Goshe, M. B., Carbonell, R. G., & Menegatti, S. (2019). Targeted Capture of Chinese Hamster Ovary Host Cell Proteins: Peptide Ligand Discovery. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 20(7). https://doi.org/10.3390/ijms20071729

Shen, W., Bobay, B. G., Greeley, L. A., Reyes, M. I., Rajabu, C. A., Blackburn, R. K., … Hanley-Bowdoin, L. (2018). Sucrose Nonfermenting 1-Related Protein Kinase 1 Phosphorylates a Geminivirus Rep Protein to Impair Viral Replication and Infection. PLANT PHYSIOLOGY, 178(1), 372–389. https://doi.org/10.1104/pp.18.00268

Bender, K. W., Blackburn, R. K., Monaghan, J., Derbyshire, P., Menke, F. L. H., Zipfel, C., … Huber, S. C. (2017). Autophosphorylation-based Calcium (Ca2(+)) Sensitivity Priming and Ca2(+)/Calmodulin Inhibition of Arabidopsis thaliana Ca2(+)-dependent Protein Kinase 28 (CPK28). JOURNAL OF BIOLOGICAL CHEMISTRY, 292(10), 3988–4002. https://doi.org/10.1074/jbc.m116.763243

Blackburn, K., Bustamante-Marin, X., Yin, W., Goshe, M. B., & Ostrowski, L. E. (2017). Quantitative Proteomic Analysis of Human Airway Cilia Identifies Previously Uncharacterized Proteins of High Abundance. JOURNAL OF PROTEOME RESEARCH, 16(4), 1579–1592. https://doi.org/10.1021/acs.jproteome.6b00972

Imkampe, J., Halter, T., Huang, S., Schulze, S., Mazzotta, S., Schmidt, N., … Kemmerling, B. (2017). The Arabidopsis Leucine-Rich Repeat Receptor Kinase BIR3 Negatively Regulates BAK1 Receptor Complex Formation and Stabilizes BAK1. PLANT CELL, 29(9), 2285–2303. https://doi.org/10.1105/tpc.17.00376

Saha, S., Paul, A., Herring, L., Dutta, A., Bhattacharya, A., Samaddar, S., … DasGupta, M. (2016). Gatekeeper Tyrosine Phosphorylation of SYMRK Is Essential for Synchronizing the Epidermal and Cortical Responses in Root Nodule Symbiosis. PLANT PHYSIOLOGY, 171(1), 71–81. https://doi.org/10.1104/pp.15.01962

Herring, L. E., Grant, K. G., Blackburn, K., Haugh, J. M., & Goshe, M. B. (2015). Development of a tandem affinity phosphoproteomic method with motif selectivity and its application in analysis of signal transduction networks. JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES, 988, 166–174. https://doi.org/10.1016/j.jchromb.2015.02.017

Argo, A. S., Shi, C., Liu, F., & Goshe, M. B. (2015). Performing protein crosslinking using gas-phase cleavable chemical crosslinkers and liquid chromatography-tandem mass spectrometry. METHODS, 89, 64–73. https://doi.org/10.1016/j.ymeth.2015.06.011

Ahmed, S., Grant, K. G., Edwards, L. E., Rahman, A., Cirit, M., Goshe, M. B., & Haugh, J. M. (2014). Data-driven modeling reconciles kinetics of ERK phosphorylation, localization, and activity states. MOLECULAR SYSTEMS BIOLOGY, 10(1). https://doi.org/10.1002/msb.134708

Schweitzer, M. H., Schroeter, E. R., & Goshe, M. B. (2014). Protein Molecular Data from Ancient (>1 million years old) Fossil Material: Pitfalls, Possibilities and Grand Challenges. Analytical Chemistry, 86(14), 6731–6740. https://doi.org/10.1021/ac500803w

Shen, W., Dallas, M. B., Goshe, M. B., & Hanley-Bowdoin, L. (2014). SnRK1 Phosphorylation of AL2 Delays Cabbage Leaf Curl Virus Infection in Arabidopsis. JOURNAL OF VIROLOGY, 88(18), 10598–10612. https://doi.org/10.1128/jvi.00761-14

Samaddar, S., Dutta, A., Sinharoy, S., Paul, A., Bhattacharya, A., Saha, S., … DasGupta, M. (2013). Autophosphorylation of gatekeeper tyrosine by symbiosis receptor kinase. FEBS LETTERS, 587(18), 2972–2979. https://doi.org/10.1016/j.febslet.2013.07.050

Olson, A. L., Liu, F., Tucker, A. T., Goshe, M. B., & Cavanagh, J. (2013). Chemical crosslinking and LC/MS analysis to determine protein domain orientation: Application to AbrB. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 431(2), 253–257. https://doi.org/10.1016/j.bbrc.2012.12.124

Bajwa, V. S., Wang, X., Blackburn, R. K., Goshe, M. B., Mitra, S. K., Williams, E. L., … Clouse, S. D. (2013). Identification and Functional Analysis of Tomato BRI1 and BAK1 Receptor Kinase Phosphorylation Sites. PLANT PHYSIOLOGY, 163(1), 30–42. https://doi.org/10.1104/pp.113.221465

Liu, F., Wu, C., Sweedler, J. V., & Goshe, M. B. (2012). An enhanced protein crosslink identification strategy using CID-cleavable chemical crosslinkers and LC/MSn analysis. PROTEOMICS, 12(3), 401–405. https://doi.org/10.1002/pmic.201100352

Chien, K.-yi, Blackburn, K., Liu, H.-C., & Goshe, M. B. (2012). Proteomic and Phosphoproteomic Analysis of Chicken Embryo Fibroblasts Infected with Cell Culture-Attenuated and Vaccine Strains of Marek's Disease Virus. JOURNAL OF PROTEOME RESEARCH, 11(12), 5663–5677. https://doi.org/10.1021/pr300471y

Kota, U., & Goshe, M. B. (2011). [Review of Advances in qualitative and quantitative plant membrane proteomics]. PHYTOCHEMISTRY, 72(10), 1040–1060. https://doi.org/10.1016/j.phytochem.2011.01.027

Chien, K.-yi, Liu, H.-C., & Goshe, M. B. (2011). Development and Application of a Phosphoproteomic Method Using Electrostatic Repulsion-Hydrophilic Interaction Chromatography (ERLIC), IMAC, and LC-MS/MS Analysis to Study Marek's Disease Virus Infection. JOURNAL OF PROTEOME RESEARCH, 10(9), 4041–4053. https://doi.org/10.1021/pr2002403

Mbeunkui, F., & Goshe, M. B. (2011). Investigation of solubilization and digestion methods for microsomal membrane proteome analysis using data-independent LC-MSE. PROTEOMICS, 11(5), 898–911. https://doi.org/10.1002/pmic.200900698

Wang, R., Lockney, D. M., Goshe, M. B., & Franzen, S. (2011). Mass Spectrometric Detection of Targeting Peptide Bioconjugation to Red clover necrotic mosaic virus. BIOCONJUGATE CHEMISTRY, 22(10), 1970–1982. https://doi.org/10.1021/bc2001769

Liu, F., & Goshe, M. B. (2010). Combinatorial Electrostatic Collision-Induced Dissociative Chemical Cross-linking Reagents for Probing Protein Surface Topology. ANALYTICAL CHEMISTRY, 82(14), 6215–6223. https://doi.org/10.1021/ac101030w

Blackburn, K., Cheng, F. Y., Williamson, J. D., & Goshe, M. B. (2010). Data-independent liquid chromatography/mass spectrometry (LC/MSE) detection and quantification of the secreted Apium graveolens pathogen defense protein mannitol dehydrogenase. Rapid Communications in Mass Spectrometry, 24(7), 1009–1016. https://doi.org/10.1002/rcm.4476

Blackburn, K., Mbeunkui, F., Mitra, S. K., Mentzel, T., & Goshe, M. B. (2010). Improving Protein and Proteome Coverage through Data-Independent Multiplexed Peptide Fragmentation. JOURNAL OF PROTEOME RESEARCH, 9(7), 3621–3637. https://doi.org/10.1021/pr100144z

Mbeunkui, F., Scholl, E. H., Opperman, C. H., Goshe, M. B., & Bird, D. M. K. (2010). Proteomic and Bioinformatic Analysis of the Root-Knot Nematode Meloidogyne hapla: The Basis for Plant Parasitism. Journal of Proteome Research, 9(10), 5370–5381. https://doi.org/10.1021/pr1006069

Gagnon, K. T., Ju, S.-Y., Goshe, M. B., Maxwell, E. S., & Franzen, S. (2009). A role for hydrophobicity in a DielsAlder reaction catalyzed by pyridyl-modified RNA. NUCLEIC ACIDS RESEARCH, 37(9), 3074–3082. https://doi.org/10.1093/nar/gkp177

Cheng, F.-yi, Blackburn, K., Lin, Y.-min, Goshe, M. B., & Williamson, J. D. (2009). Absolute Protein Quantification by LC/MSE for Global Analysis of Salicylic Acid-induced Plant Protein Secretion Responses. JOURNAL OF PROTEOME RESEARCH, 8(1), 82–93. https://doi.org/10.1021/pr800649s

Chien, K.-yi, & Goshe, M. B. (2009). [Review of Advances in Quantitative Mass Spectrometry Analysis: Weighing in on Isotope Coding and Label-Free Approaches for Expression and Functional Proteomics]. CURRENT ANALYTICAL CHEMISTRY, 5(2), 166–185. https://doi.org/10.2174/157341109787846126

Mitra, S. K., Walters, B. T., Clouse, S. D., & Goshe, M. B. (2009). An Efficient Organic Solvent Based Extraction Method for the Proteomic Analysis of Arabidopsis Plasma Membranes. JOURNAL OF PROTEOME RESEARCH, 8(6), 2752–2767. https://doi.org/10.1021/pr801044y

Blackburn, K., & Goshe, M. B. (2009). Mass Spectrometry Bioinformatics: Tools for Navigating the Proteomics Landscape. CURRENT ANALYTICAL CHEMISTRY, 5(2), 131–143. https://doi.org/10.2174/157341109787846135

Oh, M.-H., Wang, X., Kota, U., Goshe, M. B., Clouse, S. D., & Huber, S. C. (2009). Tyrosine phosphorylation of the BRI1 receptor kinase emerges as a component of brassinosteroid signaling in Arabidopsis. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 106(2), 658–663. https://doi.org/10.1073/pnas.0810249106

Schaff, J. E., Mbeunkui, F., Blackburn, K., Bird, D. M., & Goshe, M. B. (2008). A sequence-anchored genetic linkage map for the moss, Physcomitrella patens. Plant Journal, 56(5), 840–854.

Ramaroson, M. F., Ruby, J., Goshe, M. B., & Liu, H.-C. (2008). Changes in the Gallus gallus proteorne induced by Marek's disease virus. JOURNAL OF PROTEOME RESEARCH, 7(10), 4346–4358. https://doi.org/10.1021/pr800268h

Galvao, R. M., Kota, U., Soderblom, E. J., Goshe, M. B., & Boss, W. F. (2008). Characterization of a new family of protein kinases from Arabidopsis containing phosphoinositide 3/4-kinase and ubiquitin-like domains. BIOCHEMICAL JOURNAL, 409, 117–127. https://doi.org/10.1042/bj20070959

Wang, X., Kota, U., He, K., Blackburn, K., Li, J., Goshe, M. B., … Clouse, S. D. (2008). Sequential transphosphorylation of the BRI1/BAK1 receptor kinase complex impacts early events in brassinosteroid signaling. DEVELOPMENTAL CELL, 15(2), 220–235. https://doi.org/10.1016/j.devcel.2008.06.011

Whitehurst, C. B., Soderblom, E. J., West, M. L., Hernandez, R., Goshe, M. B., & Brown, D. T. (2007). Location and role of free cysteinyl residues in the Sindbis virus E1 and E2 glycoproteins. JOURNAL OF VIROLOGY, 81(12), 6231–6240. https://doi.org/10.1128/JVI.02859-06

Mitra, S. K., Gantt, J. A., Ruby, J. F., Clouse, S. D., & Goshe, M. B. (2007). Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. JOURNAL OF PROTEOME RESEARCH, 6(5), 1933–1950. https://doi.org/10.1021/pr060525b

Soderblom, E. J., Bobay, B. G., Cavanagh, J., & Goshe, M. B. (2007). Tandem mass spectrometry acquisition approaches to enhance identification of protein-protein interactions using low-energy collision-induced dissociative chemical crosslinking reagents. RAPID COMMUNICATIONS IN MASS SPECTROMETRY, 21(21), 3395–3408. https://doi.org/10.1002/rcm.3213

Liu, H.-C. S., Soderblom, E. J., & Goshe, M. B. (2006). A mass spectrometry-based proteomic approach to study Marek's Disease Virus gene expression. Journal of Virological Methods, 135(1), 66–75. https://doi.org/10.1016/j.jviromet.2006.02.001

Soderblom, E. J., & Goshe, M. B. (2006). Collision-induced dissociative chemical cross-linking reagents and methodology: Applications to protein structural characterization using tandem mass spectrometry analysis. ANALYTICAL CHEMISTRY, 78(23), 8059–8068. https://doi.org/10.1021/ac0613840

Feeney, B., Soderblom, E. J., Goshe, M. B., & Clark, A. C. (2006). Novel protein purification system utilizing an N-terminal fusion protein and a caspase-3 cleavable linker. Protein Expression and Purification, 47(1), 311–318. https://doi.org/10.1016/j.pep.2005.10.005

Wang, X. F., Goshe, M. B., Soderblom, E. J., Phinney, B. S., Kuchar, J. A., Li, J., … Clouse, S. D. (2005). Identification and functional analysis of in vivo phosphorylation sites of the Arabidopsis BRASSINOSTEROID-INSENSITIVE1 receptor kinase. PLANT CELL, 17(6), 1685–1703. https://doi.org/10.1105/tpc.105.031393

Bobay, B. G., Benson, L., Naylor, S., Feeney, B., Clark, A. C., Goshe, M. B., … Cavanagh, J. (2004). Evaluation of the DNA Binding Tendencies of the Transition State Regulator AbrB†. Biochemistry, 43(51), 16106–16118. https://doi.org/10.1021/bi048399h

Blonder, J., Goshe, M. B., Xiao, W., Camp, D. G., Wingerd, M., Davis, R. W., & Smith, R. D. (2004). Global Analysis of the Membrane Subproteome of Pseudomonas aeruginosaUsing Liquid Chromatography-Tandem Mass Spectrometry. Journal of Proteome Research, 3(3), 434–444. https://doi.org/10.1021/pr034074w