Ming-Zhu Shi
Works (5)
Updated: July 5th, 2023 15:51
2013 article
Regulation of anthocyanin biosynthesis in Arabidopsis thaliana red pap1-D cells metabolically programmed by auxins
Liu, Z., Shi, M.-Z., & Xie, D.-Y. (2013, December 26). Planta, Vol. 239, pp. 765–781.
author keywords: Anthocyanin biosynthesis; Arabidopsis thaliana; Auxins; Metabolic engineering; pap1-D cells; WBM complex; Regulation route
MeSH headings : 2,4-Dichlorophenoxyacetic Acid / pharmacology; Anthocyanins / metabolism; Arabidopsis / drug effects; Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Biosynthetic Pathways; Gene Expression Regulation, Plant; Indoleacetic Acids / pharmacology; Light; Metabolic Engineering; Pancreatitis-Associated Proteins; Pigmentation; Plant Growth Regulators / pharmacology; Tissue Culture Techniques; Transcription Factors / genetics; Transcription Factors / metabolism
topics (OpenAlex): Plant Gene Expression Analysis; Phytochemicals and Antioxidant Activities; Plant Molecular Biology Research
TL;DR:
The data demonstrate that the three auxins regulate anthocyanin biosynthesis in metabolically programmed red cells via altering the expression of transcription factor genes and pathway genes, such as DFR and ANS.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(OpenAlex)
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018
2012 article
Regulation of anthocyanin biosynthesis by nitrogen in TTG1–GL3/TT8–PAP1-programmed red cells of Arabidopsis thaliana
Zhou, L.-L., Shi, M.-Z., & Xie, D.-Y. (2012, June 5). Planta, Vol. 236, pp. 825–837.
author keywords: Arabidopsis thaliana; Anthocyanin biosynthesis; Production of anthocyanin pigmentation 1; Nitrogen
MeSH headings : Anthocyanins / biosynthesis; Arabidopsis / cytology; Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / metabolism; Basic Helix-Loop-Helix Transcription Factors / metabolism; Biosynthetic Pathways; Gene Expression Regulation, Plant; Genes, Plant; Genetic Variation; Genotype; Nitrogen / metabolism; Pancreatitis-Associated Proteins; Transcription Factors / metabolism
topics (OpenAlex): Plant Gene Expression Analysis; Horticultural and Viticultural Research; Plant biochemistry and biosynthesis
TL;DR:
Nitrogen regulation of anthocyanin biosynthesis in red cells undergoes a mechanism by which nitrogen controls the expression of genes encoding both main components of the TTG1–GL3/TT8–PAP1 complex and negative regulators.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018
2011 article
Engineering of red cells of Arabidopsis thaliana and comparative genome-wide gene expression analysis of red cells versus wild-type cells
Shi, M.-Z., & Xie, D.-Y. (2011, January 5). Planta, Vol. 233, pp. 787–805.
Contributors: n & D. Xie n
author keywords: Arabidopsis thaliana; Anthocyanin; Biosynthesis; Cyanin; Metabolic engineering; Microarray analysis
MeSH headings : Anthocyanins / chemistry; Anthocyanins / metabolism; Arabidopsis / cytology; Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins; Biosynthetic Pathways; Chromatography, High Pressure Liquid; Gene Expression Profiling; Gene Expression Regulation, Plant; Genes, Plant / genetics; Genetic Engineering / methods; Genome, Plant / genetics; Pancreatitis-Associated Proteins; Principal Component Analysis; Spectrometry, Mass, Electrospray Ionization; Transcription Factors / genetics; Transcription Factors / metabolism
topics (OpenAlex): Plant Gene Expression Analysis; Plant tissue culture and regeneration; Plant Molecular Biology Research
TL;DR:
It is suggested that the difference in gene expression profiles between the two cell lines likely results from cell types, the overexpression of PAP1, and the high metabolic flux toward anthocyanins.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018
2010 article
Features of anthocyanin biosynthesis in pap1-D and wild-type Arabidopsis thaliana plants grown in different light intensity and culture media conditions
Shi, M.-Z., & Xie, D.-Y. (2010, March 22). Planta, Vol. 231, pp. 1385–1400.
Contributors: n & D. Xie n
author keywords: Anthocyanins; Anthocyanidins; Arabidopsis thaliana; Biosynthesis; Cyanins; Cyanidins; HPLC-ESI-MS; HPLC-TOF-MS; pap1-D-mutant; PAP1; Metabolic profiling; RT-PCR
MeSH headings : Anthocyanins / biosynthesis; Anthocyanins / chemistry; Anthocyanins / metabolism; Arabidopsis / cytology; Arabidopsis / drug effects; Arabidopsis / growth & development; Arabidopsis / radiation effects; Arabidopsis Proteins; Biological Transport / drug effects; Biological Transport / radiation effects; Chromatography, High Pressure Liquid; Culture Media / pharmacology; Gene Expression Regulation, Plant / drug effects; Gene Expression Regulation, Plant / radiation effects; Genes, Dominant / genetics; Genes, Plant / genetics; Glycosylation / drug effects; Glycosylation / radiation effects; Light; Mass Spectrometry; Metabolic Networks and Pathways / drug effects; Metabolic Networks and Pathways / radiation effects; Pancreatitis-Associated Proteins; Pigmentation / drug effects; Pigmentation / genetics; Pigmentation / radiation effects; Plant Leaves / drug effects; Plant Leaves / metabolism; Plant Leaves / radiation effects; RNA, Messenger / genetics; RNA, Messenger / metabolism; Transcription Factors / genetics; Transcription Factors / metabolism
topics (OpenAlex): Plant Gene Expression Analysis; Phytochemicals and Antioxidant Activities; Photosynthetic Processes and Mechanisms
TL;DR:
The A. thaliana anthocyanin molecule A11 was most likely the first cyanin derived from the multiple modification steps of cyanidin, and rosette leaves of pap1-D plants produced much higher levels and more diverse molecular profiling of cyanins than those of WT plants.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(OpenAlex)
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018
2008 journal article
Development of tobacco callus cultures over expressing Arabidopsis PAP1/MYB75 transcription factor and characterization of anthocyanin biosynthesis
Planta, 229(1), 37–51.
author keywords: Anthocyanin; Callus; HPLC-mass spectrum; Metabolic profiling; Nicotiana tabacum; PAP1; Tobacco; Transgene
MeSH headings : 2,4-Dichlorophenoxyacetic Acid / pharmacology; Anthocyanins / biosynthesis; Anthocyanins / chemistry; Arabidopsis / drug effects; Arabidopsis / metabolism; Arabidopsis / radiation effects; Arabidopsis Proteins; Chromatography, High Pressure Liquid; Chromatography, Liquid; Indoleacetic Acids / pharmacology; Light; Mass Spectrometry; Nitrates / pharmacology; Pancreatitis-Associated Proteins; Plants, Genetically Modified; Potassium Compounds / pharmacology; Tissue Culture Techniques; Tobacco / cytology; Tobacco / drug effects; Tobacco / genetics; Tobacco / growth & development; Transcription Factors / metabolism
topics (OpenAlex): Plant Gene Expression Analysis; Photosynthetic Processes and Mechanisms; Plant biochemistry and biosynthesis
TL;DR:
It is demonstrated that dark, nitrogen nutrients, and auxin apparently affect the anthocyanin profiles in PAP1 transgenic callus cultures; and it is suggested that these cell cultures are an appropriate system to study the regulatory function of P AP1 on the anthOCyanin biosynthesis at post-transcriptional level in vivo.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science; OpenAlex)
Sources: Web Of Science, NC State University Libraries, Crossref, ORCID
Added: August 6, 2018