Masahiko Taniguchi

Absorption and fluorescence spectra of open-chain tetrapyrrole pigments-bilirubins, biliverdins, phycobilins, and synthetic analogues

JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS, 55.

Bacteriochlorin syntheses - Status, problems, and exploration

JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 8.

Digital Database of Absorption Spectra of Diverse Flavonoids Enables Structural Comparisons and Quantitative Evaluations

[Review of ]. JOURNAL OF NATURAL PRODUCTS, 86(4), 1087–1119.

Four Routes to 3-(3-Methoxy-1,3-dioxopropyl)pyrrole, a Core Motif of Rings C and E in Photosynthetic Tetrapyrroles

MOLECULES, 28(3).

Tolyporphins-Exotic Tetrapyrrole Pigments in a Cyanobacterium-A Review

[Review of ]. MOLECULES, 28(16).

Balancing Panchromatic Absorption and Multistep Charge Separation in a Compact Molecular Architecture br

Roy, A., Magdaong, N. C. M., Jing, H., Rong, J., Diers, J. R., Kang, H. S., … Holten, D. (2022, December 12). JOURNAL OF PHYSICAL CHEMISTRY A, Vol. 12.

Beyond green with synthetic chlorophylls - Connecting structural features with spectral properties

JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS, 52.

Chasing the green echiuran worm Bonellia in tidal pools of Okinawa

FRONTIERS IN BIOLOGICAL DETECTION: FROM NANOSENSORS TO SYSTEMS XIV, Vol. 11979.

Panchromatic Absorbers Tethered for Bioconjugation or Surface Attachment

MOLECULES, 27(19).

Phenylene-linked tetrapyrrole arrays containing free base and diverse metal chelate forms - Versatile synthetic architectures for catalysis and artificial photosynthesis

[Review of ]. COORDINATION CHEMISTRY REVIEWS, 456.

Phyllobilins - Bioactive Natural Products Derived from Chlorophyll - Plant Origins, Structures, Absorption Spectra, and Biomedical Properties

Karg, C. A., Taniguchi, M., Lindsey, J. S., & Moser, S. (2022, December 8). PLANTA MEDICA, Vol. 12.

Simple Dipyrrin Analogues of Prodigiosin for Use as Colistin Adjuvants

Siwawannapong, K., Nemeth, A. M., Melander, R. J., Rong, J., Davis, J. R., Taniguchi, M., … Melander, C. (2022, July 8). CHEMMEDCHEM, Vol. 7.

A perspective on the redox properties of tetrapyrrole macrocycles

Diers, J. R., Kirmaier, C., Taniguchi, M., Lindsey, J. S., Bocian, D. F., & Holten, D. (2021, September 7). PHYSICAL CHEMISTRY CHEMICAL PHYSICS, Vol. 9.

Absorption and Fluorescence Spectral Database of Chlorophylls and Analogues

PHOTOCHEMISTRY AND PHOTOBIOLOGY, 97(1), 136–165.

Comprehensive review of photophysical parameters (epsilon, Phi(f), tau(s)) of tetraphenylporphyrin (H2TPP) and zinc tetraphenylporphyrin (ZnTPP) - Critical benchmark molecules in photochemistry and photosynthesis

[Review of ]. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS, 46, 100401.

Electronic Structure and Excited-State Dynamics of Rylene-Tetrapyrrole Panchromatic Absorbers

JOURNAL OF PHYSICAL CHEMISTRY A, 125(36), 7900–7919.

Fluorescence Assay for Tolyporphins Amidst Abundant Chlorophyll in Crude Cyanobacterial Extracts

Nguyen, K.-U., Zhang, R., Taniguchi, M., & Lindsey, J. S. (2021, July 16). PHOTOCHEMISTRY AND PHOTOBIOLOGY, Vol. 7.

PhotochemCAD spectra viewer for web-based visualization of absorption and fluorescence spectra

Progress in Biomedical Optics and Imaging - Proceedings of SPIE, 11660.

The fluorescence quantum yield parameter in Förster resonance energy transfer (FRET)—Meaning, misperception, and molecular design

Chemical Physics Reviews, 2(1), 011302.

Tolyporphins A-R, unusual tetrapyrrole macrocycles in a cyanobacterium from Micronesia, assessed quantitatively from the culture HT-58-2

Timothy J. O'Donnell, Gurr, J. R., Dai, J., Taniguchi, M., Williams, P. G., & Lindsey, J. S. (2021, June 8). NEW JOURNAL OF CHEMISTRY, Vol. 6.

Absorption and fluorescence spectra of organic compounds from 40 sources - archives, repositories, databases, and literature search engines

REPORTERS, MARKERS, DYES, NANOPARTICLES, AND MOLECULAR PROBES FOR BIOMEDICAL APPLICATIONS XII, Vol. 11256.

Analysis of Wikipedia pageviews to identify popular chemicals

REPORTERS, MARKERS, DYES, NANOPARTICLES, AND MOLECULAR PROBES FOR BIOMEDICAL APPLICATIONS XII, Vol. 11256.

Bioconjugatable synthetic chlorins rendered water-soluble with three PEG-12 groups via click chemistry

JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 24(1-3), 362–378.

Crystal Structure of 1,9-Dibromo-5-phenyldipyrrin, Tetrapyrrole Synthesis Derivative and Free Base Ligand of BODIPY Building Blocks

X-RAY STRUCTURE ANALYSIS ONLINE, 36, 21–22.

Photophysical Properties and Electronic Structure of Zinc(II) Porphyrins Bearing 0-4 meso-Phenyl Substituents: Zinc Porphine to Zinc Tetraphenylporphyrin (ZnTPP)

JOURNAL OF PHYSICAL CHEMISTRY A, 124(38), 7776–7794.

Developing a user community in the photosciences: a website for spectral data and access to PhotochemCAD

(S. Achilefu & R. Raghavachari, Eds.). REPORTERS, MARKERS, DYES, NANOPARTICLES, AND MOLECULAR PROBES FOR BIOMEDICAL APPLICATIONS XI, Vol. 10893.

Heuristics from Modeling of Spectral Overlap in Forster Resonance Energy Transfer (FRET)

JOURNAL OF CHEMICAL INFORMATION AND MODELING, 59(2), 652–667.

Database of Absorption and Fluorescence Spectra of > 300 Common Compounds for use in PhotochemCAD

Database of Absorption and Fluorescence Spectra of > 300 Common Compounds for use in PhotochemCAD. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 94(2), 290–327.

PhotochemCAD 3: Diverse Modules for Photophysical Calculations with Multiple Spectral Databases

PHOTOCHEMISTRY AND PHOTOBIOLOGY, 94(2), 277–289.

Red and near-infrared fluorophores inspired by chlorophylls. Consideration of practical brightness in multicolor flow cytometry and biomedical sciences

(S. Achilefu & R. Raghavachari, Eds.). REPORTERS, MARKERS, DYES, NANOPARTICLES, AND MOLECULAR PROBES FOR BIOMEDICAL APPLICATIONS X, Vol. 10508.

Hydrogen Evolution Catalysis by a Sparsely Substituted Cobalt Chlorin

ACS CATALYSIS, 7(5), 3597–3606.

Synthesis and Spectral Properties of meso-Arylbacteriochlorins, Including Insights into Essential Motifs of their Hydrodipyrrin Precursors

Molecules, 22(4), 634.

Synthesis, photophysics and electronic structure of oxobacteriochlorins

NEW JOURNAL OF CHEMISTRY, 41(10), 3732–3744.

Synthetic Chlorins, Possible Surrogates for Chlorophylls, Prepared by Derivatization of Porphyrins

[Review of ]. CHEMICAL REVIEWS, 117(2), 344–535.

The Porphobilinogen Conundrum in Prebiotic Routes to Tetrapyrrole Macrocycles

ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES, 47(1), 93–119.

Bioconjugatable, PEGylated hydroporphyrins for photochemistry and photomedicine. Narrow-band, near-infrared-emitting bacteriochlorins

NEW JOURNAL OF CHEMISTRY, 40(9), 7750–7767.

Complexity in structure-directed prebiotic chemistry. Reaction bifurcation from a beta-diketone in tetrapyrrole formation

NEW JOURNAL OF CHEMISTRY, 40(7), 6434–6440.

Complexity in structure-directed prebiotic chemistry. Unexpected compositional richness from competing reactants in tetrapyrrole formation

NEW JOURNAL OF CHEMISTRY, 40(7), 6421–6433.

Integration of Cyanine, Merocyanine and Styryl Dye Motifs with Synthetic Bacteriochlorins

Photochemistry and Photobiology, 92(1), 111–125.

Photophysical Properties and Electronic Structure of Porphyrins Bearing Zero to Four meso-Phenyl Substituents: New Insights into Seemingly Well Understood Tetrapyrroles

JOURNAL OF PHYSICAL CHEMISTRY A, 120(49), 9719–9731.

Scope and limitations of two model prebiotic routes to tetrapyrrole macrocycles

NEW JOURNAL OF CHEMISTRY, 40(9), 7445–7455.

Synthesis of diverse acyclic precursors to pyrroles for studies of prebiotic routes to tetrapyrrole macrocycles

NEW JOURNAL OF CHEMISTRY, 40(10), 8786–8808.

Complexity in structure-directed prebiotic chemistry. Effect of a defective competing reactant in tetrapyrrole formation

NEW JOURNAL OF CHEMISTRY, 39(11), 8273–8281.

Elaboration of an unexplored substitution site in synthetic bacteriochlorins

JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 19(7), 887–902.

Extending the Short and Long Wavelength Limits of Bacteriochlorin Near-Infrared Absorption via Dioxo- and Bisimide-Functionalization

JOURNAL OF PHYSICAL CHEMISTRY B, 119(12), 4382–4395.

Near-infrared tunable bacteriochlorins equipped for bioorthogonal labeling

NEW JOURNAL OF CHEMISTRY, 39(6), 4534–4550.

Paley's watchmaker analogy and prebiotic synthetic chemistry in surfactant assemblies. Formaldehyde scavenging by pyrroles leading to porphyrins as a case study

ORGANIC & BIOMOLECULAR CHEMISTRY, 13(39), 10025–10031.

Photophysical Properties and Electronic Structure of Chlorin-Imides: Bridging the Gap between Chlorins and Bacteriochlorins

JOURNAL OF PHYSICAL CHEMISTRY B, 119(24), 7503–7515.

Progress towards synthetic chlorins with graded polarity, conjugatable substituents, and wavelength tunability

JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 19(4), 547–572.

NMR spectral properties of 16 synthetic bacteriochlorins with site-specific C-13 or N-15 substitution

JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 18(6), 433–456.

Photophysical properties and electronic structure of retinylidene–chlorin–chalcones and analogues

Photochemical & Photobiological Sciences, 13(4), 634.

Statistical considerations on the formation of circular photosynthetic light-harvesting complexes from Rhodopseudomonas palustris

PHOTOSYNTHESIS RESEARCH, 121(1), 49–60.

Versatile design of biohybrid light-harvesting architectures to tune location, density, and spectral coverage of attached synthetic chromophores for enhanced energy capture

PHOTOSYNTHESIS RESEARCH, 121(1), 35–48.

Aqueous–membrane partitioning of β-substituted porphyrins encompassing diverse polarity

New Journal of Chemistry, 37(4), 1087.

ChemInform Abstract: Enumeration of Isomers of Substituted Tetrapyrrole Macrocycles: From Classical Problems in Biology to Modern Combinatorial Libraries

ChemInform, 44(31), no-no.

Enumeration of Virtual Libraries of Combinatorial Modular Macrocyclic (Bracelet, Necklace) Architectures and Their Linear Counterparts

JOURNAL OF CHEMICAL INFORMATION AND MODELING, 53(9), 2203–2216.

Expanded combinatorial formation of porphyrin macrocycles in aqueous solution containing vesicles. A prebiotic model

New Journal of Chemistry, 37(4), 1073.

Synthesis and photophysical properties of chlorins bearing 0–4 distinct meso-substituents

Photochemical & Photobiological Sciences, 12(12), 2089.

A tandem combinatorial model for the prebiogenesis of diverse tetrapyrrole macrocycles

New Journal of Chemistry, 36(4), 1057.

Competing Knorr and Fischer-Fink pathways to pyrroles in neutral aqueous solution

TETRAHEDRON, 68(34), 6957–6967.

Diversity, isomer composition, and design of combinatorial libraries of tetrapyrrole macrocycles

JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 16(1), 1–13.

Enumeration of Isomers of Substituted Tetrapyrrole Macrocycles: From Classical Problems in Biology to Modern Combinatorial Libraries

Taniguchi, M., & Lindsey, J. S. (2012, July). Handbook of Porphyrin Science (Volume 23), pp. 1–80.

Primordial Oil Slick and the Formation of Hydrophobic Tetrapyrrole Macrocycles

Astrobiology, 12(11), 1055–1068.

Self-organization of tetrapyrrole constituents to give a photoactive protocell

Chemical Science, 3(6), 1963.

Synthesis and Physicochemical Properties of Metallobacteriochlorins

INORGANIC CHEMISTRY, 51(17), 9443–9464.

Abiotic formation of uroporphyrinogen and coproporphyrinogen from acyclic reactants

NEW JOURNAL OF CHEMISTRY, 35(1), 65–75.

Encoding isotopic watermarks in molecular electronic materials as an anti-counterfeiting strategy. Application to porphyrins for information storage

JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 15(7-8), 505–516.

Photophysical Properties and Electronic Structure of Stable, Tunable Synthetic Bacteriochlorins: Extending the Features of Native Photosynthetic Pigments

JOURNAL OF PHYSICAL CHEMISTRY B, 115(37), 10801–10816.

Structural characteristics that make chlorophylls green: interplay of hydrocarbon skeleton and substituents

NEW JOURNAL OF CHEMISTRY, 35(1), 76–88.

Virtual Libraries of Tetrapyrrole Macrocycles. Combinatorics, Isomers, Product Distributions, and Data Mining

JOURNAL OF CHEMICAL INFORMATION AND MODELING, 51(9), 2233–2247.

Activation Energies for Oxidation of Porphyrin Monolayers Anchored to Au(111)

LANGMUIR, 26(20), 15718–15721.

Probing the Rate of Hole Transfer in Oxidized Porphyrin Dyads Using Thallium Hyperfine Clocks

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 132(34), 12121–12132.

Probing the Rate of Hole Transfer in Oxidized Synthetic Chlorin Dyads via Site-Specific C-13-Labeling

JOURNAL OF ORGANIC CHEMISTRY, 75(10), 3193–3202.

Refined routes to chlorin building blocks

Structural studies of sparsely substituted synthetic chlorins and phorbines establish benchmarks for changes in the ligand core and framework of chlorophyll macrocycles

JOURNAL OF MOLECULAR STRUCTURE, 979(1-3), 27–45.

Synthesis of oligo(p-phenylene)-linked dyads containing free base, zinc(II) or thallium(III) porphyrins for studies in artificial photosynthesis

TETRAHEDRON, 66(30), 5549–5565.

Excited-State Energy Flow in Phenylene-Linked Multiporphyrin Arrays

JOURNAL OF PHYSICAL CHEMISTRY B, 113(23), 8011–8019.

Linker Dependence of Energy and Hole Transfer in Neutral and Oxidized Multiporphyrin Arrays

JOURNAL OF PHYSICAL CHEMISTRY B, 113(52), 16483–16493.

Methods and intermediates for the synthesis of porphyrins

Probing Ground-state Hole Transfer Between Equivalent, Electrochemically Inaccessible States in Multiporphyrin Arrays Using Time-resolved Optical Spectroscopy

PHOTOCHEMISTRY AND PHOTOBIOLOGY, 85(3), 693–704.

Refined syntheses of hydrodipyrrin precursors to chlorin and bacteriochlorin building blocks

JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 13(10), 1098–1110.