Masahiko Taniguchi

Liu, Q., Taniguchi, M., Goel, S., & Lindsey, J. S. (2024, April). Rapid screening of dyes for self-aggregation, adsorption and metabolic integrity - Quantitative metrics as a prelude to biological studies. DYES AND PIGMENTS, Vol. 223. https://doi.org/10.1016/j.dyepig.2023.111914

Taniguchi, M., & Lindsey, J. S. (2023). Absorption and fluorescence spectra of open-chain tetrapyrrole pigments-bilirubins, biliverdins, phycobilins, and synthetic analogues. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS, 55. https://doi.org/10.1016/j.jphotochemrev.2023.100585

Tran, V.-P., Wang, P., Matsumoto, N., Liu, S., Jing, H., Nalaoh, P., … Lindsey, J. S. (2023). Bacteriochlorin syntheses - Status, problems, and exploration. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 8. https://doi.org/10.1142/S1088424623501171

Taniguchi, M., LaRocca, C. A., Bernat, J. D., & Lindsey, J. S. (2023). [Review of Digital Database of Absorption Spectra of Diverse Flavonoids Enables Structural Comparisons and Quantitative Evaluations]. JOURNAL OF NATURAL PRODUCTS, 86(4), 1087–1119. https://doi.org/10.1021/acs.jnatprod.2c00720

Nguyen, K. C., Tran, A. T. N., Wang, P., Zhang, S., Wu, Z., Taniguchi, M., & Lindsey, J. S. (2023). Four Routes to 3-(3-Methoxy-1,3-dioxopropyl)pyrrole, a Core Motif of Rings C and E in Photosynthetic Tetrapyrroles. MOLECULES, 28(3). https://doi.org/10.3390/molecules28031323

Nguyen, K.-U., Zhang, Y., Liu, Q., Zhang, R., Jin, X., Taniguchi, M., … Lindsey, J. S. (2023). [Review of Tolyporphins-Exotic Tetrapyrrole Pigments in a Cyanobacterium-A Review]. MOLECULES, 28(16). https://doi.org/10.3390/molecules28166132

Roy, A., Magdaong, N. C. M., Jing, H., Rong, J., Diers, J. R., Kang, H. S., … Holten, D. (2022, December 12). Balancing Panchromatic Absorption and Multistep Charge Separation in a Compact Molecular Architecture br. JOURNAL OF PHYSICAL CHEMISTRY A, Vol. 12. https://doi.org/10.1021/acs.jpca.2c06040

Taniguchi, M., Bocian, D. F., Holten, D., & Lindsey, J. S. (2022). Beyond green with synthetic chlorophylls - Connecting structural features with spectral properties. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS, 52. https://doi.org/10.1016/j.jphotochemrev.2022.100513

Taniguchi, M., Taniguchi, M., Zhang, R., Goto, R., & Lindsey, J. S. (2022). Chasing the green echiuran worm Bonellia in tidal pools of Okinawa. FRONTIERS IN BIOLOGICAL DETECTION: FROM NANOSENSORS TO SYSTEMS XIV, Vol. 11979. https://doi.org/10.1117/12.2608722

Liu, R., Rong, J., Wu, Z., Taniguchi, M., Bocian, D. F., Holten, D., & Lindsey, J. S. (2022). Panchromatic Absorbers Tethered for Bioconjugation or Surface Attachment. MOLECULES, 27(19). https://doi.org/10.3390/molecules27196501

Jing, H., Rong, J., Taniguchi, M., & Lindsey, J. S. (2022). [Review of Phenylene-linked tetrapyrrole arrays containing free base and diverse metal chelate forms - Versatile synthetic architectures for catalysis and artificial photosynthesis]. COORDINATION CHEMISTRY REVIEWS, 456. https://doi.org/10.1016/j.ccr.2021.214278

Karg, C. A., Taniguchi, M., Lindsey, J. S., & Moser, S. (2022, December 8). Phyllobilins - Bioactive Natural Products Derived from Chlorophyll - Plant Origins, Structures, Absorption Spectra, and Biomedical Properties. PLANTA MEDICA, Vol. 12. https://doi.org/10.1055/a-1955-4624

Siwawannapong, K., Nemeth, A. M., Melander, R. J., Rong, J., Davis, J. R., Taniguchi, M., … Melander, C. (2022, July 8). Simple Dipyrrin Analogues of Prodigiosin for Use as Colistin Adjuvants. CHEMMEDCHEM, Vol. 7. https://doi.org/10.1002/cmdc.202200286

Diers, J. R., Kirmaier, C., Taniguchi, M., Lindsey, J. S., Bocian, D. F., & Holten, D. (2021, September 7). A perspective on the redox properties of tetrapyrrole macrocycles. PHYSICAL CHEMISTRY CHEMICAL PHYSICS, Vol. 9. https://doi.org/10.1039/d1cp01943k

Taniguchi, M., & Lindsey, J. S. (2021). Absorption and Fluorescence Spectral Database of Chlorophylls and Analogues. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 97(1), 136–165. https://doi.org/10.1111/php.13319

Taniguchi, M., Lindsey, J. S., Bocian, D. F., & Holten, D. (2021). [Review of Comprehensive review of photophysical parameters (epsilon, Phi(f), tau(s)) of tetraphenylporphyrin (H2TPP) and zinc tetraphenylporphyrin (ZnTPP) - Critical benchmark molecules in photochemistry and photosynthesis]. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS, 46, 100401. https://doi.org/10.1016/j.jphotochemrev.2020.100401

Rong, J., Magdaong, N. C. M., Taniguchi, M., Diers, J. R., Niedzwiedzki, D. M., Kirmaier, C., … Holten, D. (2021). Electronic Structure and Excited-State Dynamics of Rylene-Tetrapyrrole Panchromatic Absorbers. JOURNAL OF PHYSICAL CHEMISTRY A, 125(36), 7900–7919. https://doi.org/10.1021/acs.jpca.1c05771

Nguyen, K.-U., Zhang, R., Taniguchi, M., & Lindsey, J. S. (2021, July 16). Fluorescence Assay for Tolyporphins Amidst Abundant Chlorophyll in Crude Cyanobacterial Extracts. PHOTOCHEMISTRY AND PHOTOBIOLOGY, Vol. 7. https://doi.org/10.1111/php.13474

Wu, Z., Kittinger, A., Norcross, A. E., Taniguchi, M., & Lindsey, J. S. (2021). PhotochemCAD spectra viewer for web-based visualization of absorption and fluorescence spectra. Progress in Biomedical Optics and Imaging - Proceedings of SPIE, 11660. https://doi.org/10.1117/12.2577840

Lindsey, J. S., Taniguchi, M., Bocian, D. F., & Holten, D. (2021). The fluorescence quantum yield parameter in Förster resonance energy transfer (FRET)—Meaning, misperception, and molecular design. Chemical Physics Reviews, 2(1), 011302. https://doi.org/10.1063/5.0041132

Timothy J. O'Donnell, Gurr, J. R., Dai, J., Taniguchi, M., Williams, P. G., & Lindsey, J. S. (2021, June 8). Tolyporphins A-R, unusual tetrapyrrole macrocycles in a cyanobacterium from Micronesia, assessed quantitatively from the culture HT-58-2. NEW JOURNAL OF CHEMISTRY, Vol. 6. https://doi.org/10.1039/d1nj02108g

Taniguchi, M., & Lindsey, J. S. (2020). Absorption and fluorescence spectra of organic compounds from 40 sources - archives, repositories, databases, and literature search engines. REPORTERS, MARKERS, DYES, NANOPARTICLES, AND MOLECULAR PROBES FOR BIOMEDICAL APPLICATIONS XII, Vol. 11256. https://doi.org/10.1117/12.2542859

Cao, Y., Mehta, H., Norcross, A. E., Taniguchi, M., & Lindsey, J. S. (2020). Analysis of Wikipedia pageviews to identify popular chemicals. REPORTERS, MARKERS, DYES, NANOPARTICLES, AND MOLECULAR PROBES FOR BIOMEDICAL APPLICATIONS XII, Vol. 11256. https://doi.org/10.1117/12.2542835

Matsumoto, N., Taniguchi, M., & Lindsey, J. S. (2020). Bioconjugatable synthetic chlorins rendered water-soluble with three PEG-12 groups via click chemistry. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 24(1-3), 362–378. https://doi.org/10.1142/S1088424619501219

Donal F. O'shea, Sommer, R. D., Taniguchi, M., & Lindsey, J. S. (2020). Crystal Structure of 1,9-Dibromo-5-phenyldipyrrin, Tetrapyrrole Synthesis Derivative and Free Base Ligand of BODIPY Building Blocks. X-RAY STRUCTURE ANALYSIS ONLINE, 36, 21–22. https://doi.org/10.2116/xraystruct.36.21

Magdaong, N. C. M., Taniguchi, M., Diers, J. R., Niedzwiedzki, D. M., Kirmaier, C., Lindsey, J. S., … Holten, D. (2020). Photophysical Properties and Electronic Structure of Zinc(II) Porphyrins Bearing 0-4 meso-Phenyl Substituents: Zinc Porphine to Zinc Tetraphenylporphyrin (ZnTPP). JOURNAL OF PHYSICAL CHEMISTRY A, 124(38), 7776–7794. https://doi.org/10.1021/acs.jpca.0c06841

Guo, Y., Xu, Z., Norcross, A. E., Taniguchi, M., & Lindsey, J. S. (2019). Developing a user community in the photosciences: a website for spectral data and access to PhotochemCAD (S. Achilefu & R. Raghavachari, Eds.). REPORTERS, MARKERS, DYES, NANOPARTICLES, AND MOLECULAR PROBES FOR BIOMEDICAL APPLICATIONS XI, Vol. 10893. https://doi.org/10.1117/12.2508077

Qi, Q., Taniguchi, M., & Lindsey, J. S. (2019). Heuristics from Modeling of Spectral Overlap in Forster Resonance Energy Transfer (FRET). JOURNAL OF CHEMICAL INFORMATION AND MODELING, 59(2), 652–667. https://doi.org/10.1021/acs.jcim.8b00753

Taniguchi, M., & Lindsey, J. S. (2018). Database of Absorption and Fluorescence Spectra of > 300 Common Compounds for use in PhotochemCAD. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 94(2), 290–327. https://doi.org/10.1111/php.12860

Taniguchi, M., Du, H., & Lindsey, J. S. (2018). PhotochemCAD 3: Diverse Modules for Photophysical Calculations with Multiple Spectral Databases. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 94(2), 277–289. https://doi.org/10.1111/php.12862

Taniguchi, M., Hu, G., Liu, R., Du, H., & Lindsey, J. S. (2018). Red and near-infrared fluorophores inspired by chlorophylls. Consideration of practical brightness in multicolor flow cytometry and biomedical sciences (S. Achilefu & R. Raghavachari, Eds.). REPORTERS, MARKERS, DYES, NANOPARTICLES, AND MOLECULAR PROBES FOR BIOMEDICAL APPLICATIONS X, Vol. 10508. https://doi.org/10.1117/12.2302709

Maher, A. G., Passard, G., Dogutan, D. K., Halbach, R. L., Anderson, B. L., Gagliardi, C. J., … Nocera, D. G. (2017). Hydrogen Evolution Catalysis by a Sparsely Substituted Cobalt Chlorin. ACS CATALYSIS, 7(5), 3597–3606. https://doi.org/10.1021/acscatal.7b00969

Reddy, M., Zhang, S., Kim, H.-J., Mass, O., Taniguchi, M., & Lindsey, J. (2017). Synthesis and Spectral Properties of meso-Arylbacteriochlorins, Including Insights into Essential Motifs of their Hydrodipyrrin Precursors. Molecules, 22(4), 634. https://doi.org/10.3390/molecules22040634

Liu, M., Chen, C.-Y., Hood, D., Taniguchi, M., Diers, J. R., Bocian, D. F., … Lindsey, J. S. (2017). Synthesis, photophysics and electronic structure of oxobacteriochlorins. NEW JOURNAL OF CHEMISTRY, 41(10), 3732–3744. https://doi.org/10.1039/c6nj04135c

Taniguchi, M., & Lindsey, J. S. (2017). [Review of Synthetic Chlorins, Possible Surrogates for Chlorophylls, Prepared by Derivatization of Porphyrins]. CHEMICAL REVIEWS, 117(2), 344–535. https://doi.org/10.1021/acs.chemrev.5b00696

Taniguchi, M., Ptaszek, M., Chandrashaker, V., & Lindsey, J. S. (2017). The Porphobilinogen Conundrum in Prebiotic Routes to Tetrapyrrole Macrocycles. ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES, 47(1), 93–119. https://doi.org/10.1007/s11084-016-9506-1

Zhang, N., Jiang, J., Liu, M., Taniguchi, M., Mandal, A. K., Evans-Storms, R. B., … Lindsey, J. S. (2016). Bioconjugatable, PEGylated hydroporphyrins for photochemistry and photomedicine. Narrow-band, near-infrared-emitting bacteriochlorins. NEW JOURNAL OF CHEMISTRY, 40(9), 7750–7767. https://doi.org/10.1039/c6nj01155a

Deans, R. M., Taniguchi, M., Chandrashaker, V., Ptaszek, M., & Lindsey, J. S. (2016). Complexity in structure-directed prebiotic chemistry. Reaction bifurcation from a beta-diketone in tetrapyrrole formation. NEW JOURNAL OF CHEMISTRY, 40(7), 6434–6440. https://doi.org/10.1039/c6nj00545d

Deans, R. M., Taniguchi, M., Chandrashaker, V., Ptaszek, M., Chambers, D. R., Soares, A. R. M., & Lindsey, J. S. (2016). Complexity in structure-directed prebiotic chemistry. Unexpected compositional richness from competing reactants in tetrapyrrole formation. NEW JOURNAL OF CHEMISTRY, 40(7), 6421–6433. https://doi.org/10.1039/c6nj00543h

Yang, E., Zhang, N., Krayer, M., Taniguchi, M., Diers, J. R., Kirmaier, C., … Holten, D. (2016). Integration of Cyanine, Merocyanine and Styryl Dye Motifs with Synthetic Bacteriochlorins. Photochemistry and Photobiology, 92(1), 111–125. https://doi.org/10.1111/php.12547

Mandal, A. K., Taniguchi, M., Diers, J. R., Niedzwiedzki, D. M., Kirmaier, C., Lindsey, J. S., … Holten, D. (2016). Photophysical Properties and Electronic Structure of Porphyrins Bearing Zero to Four meso-Phenyl Substituents: New Insights into Seemingly Well Understood Tetrapyrroles. JOURNAL OF PHYSICAL CHEMISTRY A, 120(49), 9719–9731. https://doi.org/10.1021/acs.jpca.6b09483

Taniguchi, M., Deans, R. M., Chandrashaker, V., Ptaszek, M., & Lindsey, J. S. (2016). Scope and limitations of two model prebiotic routes to tetrapyrrole macrocycles. NEW JOURNAL OF CHEMISTRY, 40(9), 7445–7455. https://doi.org/10.1039/c6nj01423b

Chandrashaker, V., Ptaszek, M., Taniguchi, M., & Lindsey, J. S. (2016). Synthesis of diverse acyclic precursors to pyrroles for studies of prebiotic routes to tetrapyrrole macrocycles. NEW JOURNAL OF CHEMISTRY, 40(10), 8786–8808. https://doi.org/10.1039/c6nj02048h

Deans, R. M., Chandrashaker, V., Taniguchi, M., & Lindsey, J. S. (2015). Complexity in structure-directed prebiotic chemistry. Effect of a defective competing reactant in tetrapyrrole formation. NEW JOURNAL OF CHEMISTRY, 39(11), 8273–8281. https://doi.org/10.1039/c5nj01474c

Zhang, N., Reddy, K. R., Jiang, J., Taniguchi, M., Sommer, R. D., & Lindsey, J. S. (2015). Elaboration of an unexplored substitution site in synthetic bacteriochlorins. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 19(7), 887–902. https://doi.org/10.1142/s1088424615500534

Vairaprakash, P., Yang, E., Sahin, T., Taniguchi, M., Krayer, M., Diers, J. R., … Holten, D. (2015). Extending the Short and Long Wavelength Limits of Bacteriochlorin Near-Infrared Absorption via Dioxo- and Bisimide-Functionalization. JOURNAL OF PHYSICAL CHEMISTRY B, 119(12), 4382–4395. https://doi.org/10.1021/jp512818g

Jiang, J., Taniguchi, M., & Lindsey, J. S. (2015). Near-infrared tunable bacteriochlorins equipped for bioorthogonal labeling. NEW JOURNAL OF CHEMISTRY, 39(6), 4534–4550. https://doi.org/10.1039/c5nj00209e

Alexy, E. J., Hintz, C. W., Hughes, H. M., Taniguchi, M., & Lindsey, J. S. (2015). Paley's watchmaker analogy and prebiotic synthetic chemistry in surfactant assemblies. Formaldehyde scavenging by pyrroles leading to porphyrins as a case study. ORGANIC & BIOMOLECULAR CHEMISTRY, 13(39), 10025–10031. https://doi.org/10.1039/c5ob01409c

Faries, K. M., Diers, J. R., Springer, J. W., Yang, E., Ptaszek, M., Lahaye, D., … Holten, D. (2015). Photophysical Properties and Electronic Structure of Chlorin-Imides: Bridging the Gap between Chlorins and Bacteriochlorins. JOURNAL OF PHYSICAL CHEMISTRY B, 119(24), 7503–7515. https://doi.org/10.1021/jp511257w

Ra, D., Gauger, K. A., Muthukumaran, K., Balasubramanian, T., Chandrashaker, V., Taniguchi, M., … Lindsey, J. S. (2015). Progress towards synthetic chlorins with graded polarity, conjugatable substituents, and wavelength tunability. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 19(4), 547–572. https://doi.org/10.1142/s1088424615500042

Chen, C.-Y., Taniguchi, M., & Lindsey, J. S. (2014). NMR spectral properties of 16 synthetic bacteriochlorins with site-specific C-13 or N-15 substitution. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 18(6), 433–456. https://doi.org/10.1142/s1088424614500199

Springer, J. W., Taniguchi, M., Krayer, M., Ruzié, C., Diers, J. R., Niedzwiedzki, D. M., … Holten, D. (2014). Photophysical properties and electronic structure of retinylidene–chlorin–chalcones and analogues. Photochemical & Photobiological Sciences, 13(4), 634. https://doi.org/10.1039/C3PP50421B

Taniguchi, M., Henry, S., Cogdell, R. J., & Lindsey, J. S. (2014). Statistical considerations on the formation of circular photosynthetic light-harvesting complexes from Rhodopseudomonas palustris. PHOTOSYNTHESIS RESEARCH, 121(1), 49–60. https://doi.org/10.1007/s11120-014-9975-x

Harris, M. A., Jiang, J., Niedzwiedzki, D. M., Jiao, J., Taniguchi, M., Kirmaier, C., … Parkes-Loach, P. S. (2014). Versatile design of biohybrid light-harvesting architectures to tune location, density, and spectral coverage of attached synthetic chromophores for enhanced energy capture. PHOTOSYNTHESIS RESEARCH, 121(1), 35–48. https://doi.org/10.1007/s11120-014-9993-8

Soares, A. R. M., Thanaiah, Y., Taniguchi, M., & Lindsey, J. S. (2013). Aqueous–membrane partitioning of β-substituted porphyrins encompassing diverse polarity. New Journal of Chemistry, 37(4), 1087. https://doi.org/10.1039/c3nj41042k

Taniguchi, M., & Lindsey, J. S. (2013). ChemInform Abstract: Enumeration of Isomers of Substituted Tetrapyrrole Macrocycles: From Classical Problems in Biology to Modern Combinatorial Libraries. ChemInform, 44(31), no-no. https://doi.org/10.1002/chin.201331277

Taniguchi, M., Du, H., & Lindsey, J. S. (2013). Enumeration of Virtual Libraries of Combinatorial Modular Macrocyclic (Bracelet, Necklace) Architectures and Their Linear Counterparts. JOURNAL OF CHEMICAL INFORMATION AND MODELING, 53(9), 2203–2216. https://doi.org/10.1021/ci400175f

Soares, A. R. M., Taniguchi, M., Chandrashaker, V., & Lindsey, J. S. (2013). Expanded combinatorial formation of porphyrin macrocycles in aqueous solution containing vesicles. A prebiotic model. New Journal of Chemistry, 37(4), 1073. https://doi.org/10.1039/c3nj41041b

Aravindu, K., Kim, H.-J., Taniguchi, M., Dilbeck, P. L., Diers, J. R., Bocian, D. F., … Lindsey, J. S. (2013). Synthesis and photophysical properties of chlorins bearing 0–4 distinct meso-substituents. Photochemical & Photobiological Sciences, 12(12), 2089. https://doi.org/10.1039/C3PP50240F

Taniguchi, M., Soares, A. R. M., Chandrashaker, V., & Lindsey, J. S. (2012). A tandem combinatorial model for the prebiogenesis of diverse tetrapyrrole macrocycles. New Journal of Chemistry, 36(4), 1057. https://doi.org/10.1039/c2nj21050a

Chandrashaker, V., Taniguchi, M., Ptaszek, M., & Lindsey, J. S. (2012). Competing Knorr and Fischer-Fink pathways to pyrroles in neutral aqueous solution. TETRAHEDRON, 68(34), 6957–6967. https://doi.org/10.1016/j.tet.2012.05.080

Taniguchi, M., & Lindsey, J. S. (2012). Diversity, isomer composition, and design of combinatorial libraries of tetrapyrrole macrocycles. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 16(1), 1–13. https://doi.org/10.1142/s1088424612004628

Taniguchi, M., & Lindsey, J. S. (2012, July). Enumeration of Isomers of Substituted Tetrapyrrole Macrocycles: From Classical Problems in Biology to Modern Combinatorial Libraries. Handbook of Porphyrin Science (Volume 23), pp. 1–80. https://doi.org/10.1142/9789814397605_0009

Soares, A. R. M., Taniguchi, M., Chandrashaker, V., & Lindsey, J. S. (2012). Primordial Oil Slick and the Formation of Hydrophobic Tetrapyrrole Macrocycles. Astrobiology, 12(11), 1055–1068. https://doi.org/10.1089/ast.2012.0857

Soares, A. R. M., Taniguchi, M., Chandrashaker, V., & Lindsey, J. S. (2012). Self-organization of tetrapyrrole constituents to give a photoactive protocell. Chemical Science, 3(6), 1963. https://doi.org/10.1039/c2sc01120d

Chen, C.-Y., Sun, E., Fan, D., Taniguchi, M., McDowell, B. E., Yang, E., … Lindsey, J. S. (2012). Synthesis and Physicochemical Properties of Metallobacteriochlorins. INORGANIC CHEMISTRY, 51(17), 9443–9464. https://doi.org/10.1021/ic301262k

Lindsey, J. S., Chandrashaker, V., Taniguchi, M., & Ptaszek, M. (2011). Abiotic formation of uroporphyrinogen and coproporphyrinogen from acyclic reactants. NEW JOURNAL OF CHEMISTRY, 35(1), 65–75. https://doi.org/10.1039/c0nj00716a

Lindsey, J. S., Thamyongkit, P., Taniguchi, M., & Bocian, D. F. (2011). Encoding isotopic watermarks in molecular electronic materials as an anti-counterfeiting strategy. Application to porphyrins for information storage. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 15(7-8), 505–516. https://doi.org/10.1142/s1088424611003458

Yang, E., Kirmaier, C., Krayer, M., Taniguchi, M., Kim, H.-J., Diers, J. R., … Holten, D. (2011). Photophysical Properties and Electronic Structure of Stable, Tunable Synthetic Bacteriochlorins: Extending the Features of Native Photosynthetic Pigments. JOURNAL OF PHYSICAL CHEMISTRY B, 115(37), 10801–10816. https://doi.org/10.1021/jp205258s

Mass, O., Taniguchi, M., Ptaszek, M., Springer, J. W., Faries, K. M., Diers, J. R., … Lindsey, J. S. (2011). Structural characteristics that make chlorophylls green: interplay of hydrocarbon skeleton and substituents. NEW JOURNAL OF CHEMISTRY, 35(1), 76–88. https://doi.org/10.1039/c0nj00652a

Taniguchi, M., Du, H., & Lindsey, J. S. (2011). Virtual Libraries of Tetrapyrrole Macrocycles. Combinatorics, Isomers, Product Distributions, and Data Mining. JOURNAL OF CHEMICAL INFORMATION AND MODELING, 51(9), 2233–2247. https://doi.org/10.1021/ci200240e

Jiao, J., Taniguchi, M., Lindsey, J. S., & Bocian, D. F. (2010). Activation Energies for Oxidation of Porphyrin Monolayers Anchored to Au(111). LANGMUIR, 26(20), 15718–15721. https://doi.org/10.1021/la102802n

Diers, J. R., Taniguchi, M., Holten, D., Lindsey, J. S., & Bocian, D. F. (2010). Probing the Rate of Hole Transfer in Oxidized Porphyrin Dyads Using Thallium Hyperfine Clocks. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 132(34), 12121–12132. https://doi.org/10.1021/ja105082d

Nieves-Bernier, E. J., Diers, J. R., Taniguchi, M., Holten, D., Bocian, D. F., & Lindsey, J. S. (2010). Probing the Rate of Hole Transfer in Oxidized Synthetic Chlorin Dyads via Site-Specific C-13-Labeling. JOURNAL OF ORGANIC CHEMISTRY, 75(10), 3193–3202. https://doi.org/10.1021/jo100527h

Lindsey, J. S., Taniguchi, M., Ra, D., Mo, G., & Balasubramanian, T. (2010). Refined routes to chlorin building blocks.

Taniguchi, M., Mass, O., Boyle, P. D., Tang, Q., Diers, J. R., Bocian, D. F., … Lindsey, J. S. (2010). Structural studies of sparsely substituted synthetic chlorins and phorbines establish benchmarks for changes in the ligand core and framework of chlorophyll macrocycles. JOURNAL OF MOLECULAR STRUCTURE, 979(1-3), 27–45. https://doi.org/10.1016/j.molstruc.2010.05.035

Taniguchi, M., & Lindsey, J. S. (2010). Synthesis of oligo(p-phenylene)-linked dyads containing free base, zinc(II) or thallium(III) porphyrins for studies in artificial photosynthesis. TETRAHEDRON, 66(30), 5549–5565. https://doi.org/10.1016/j.tet.2010.05.059

Song, H.-eun, Taniguchi, M., Speckbacher, M., Yu, L., Bocian, D. F., Lindsey, J. S., & Holten, D. (2009). Excited-State Energy Flow in Phenylene-Linked Multiporphyrin Arrays. JOURNAL OF PHYSICAL CHEMISTRY B, 113(23), 8011–8019. https://doi.org/10.1021/jp902183g

Song, H.-eun, Taniguchi, M., Diers, J. R., Kirmaier, C., Bocian, D. F., Lindsey, J. S., & Holten, D. (2009). Linker Dependence of Energy and Hole Transfer in Neutral and Oxidized Multiporphyrin Arrays. JOURNAL OF PHYSICAL CHEMISTRY B, 113(52), 16483–16493. https://doi.org/10.1021/jp9072558

Lindsey, J. S., Taniguchi, M., Balakumar, A., & Fan, D. (2009). Methods and intermediates for the synthesis of porphyrins.

Song, H.-eun, Taniguchi, M., Kirmaier, C., Bocian, D. F., Lindsey, J. S., & Holten, D. (2009). Probing Ground-state Hole Transfer Between Equivalent, Electrochemically Inaccessible States in Multiporphyrin Arrays Using Time-resolved Optical Spectroscopy. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 85(3), 693–704. https://doi.org/10.1111/j.1751-1097.2008.00471.x

Krayer, M., Balasubramanian, T., Ruzie, C., Ptaszek, M., Cramer, D. L., Taniguchi, M., & Lindsey, J. S. (2009). Refined syntheses of hydrodipyrrin precursors to chlorin and bacteriochlorin building blocks. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 13(10), 1098–1110. https://doi.org/10.1142/S1088424609001406

Muthiah, C., Lahaye, D., Taniguchi, M., Ptaszek, M., & Lindsey, J. S. (2009). Regioselective Bromination Tactics in the de Novo Synthesis of Chlorophyll b Analogues. JOURNAL OF ORGANIC CHEMISTRY, 74(9), 3237–3247. https://doi.org/10.1021/jo9002954

Lindsey, J. S., Ptaszek, M., & Taniguchi, M. (2009). Simple Formation of an Abiotic Porphyrinogen in Aqueous Solution. ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES, 39(6), 495–515. https://doi.org/10.1007/s11084-009-9168-3

Mass, O., Ptaszek, M., Taniguchi, M., Diers, J. R., Kee, H. L., Bocian, D. F., … Lindsey, J. S. (2009). Synthesis and Photochemical Properties of 12-Substituted versus 13-Substituted Chlorins. JOURNAL OF ORGANIC CHEMISTRY, 74(15), 5276–5289. https://doi.org/10.1021/jo900706x

Laha, J. K., Muthiah, C., Taniguchi, M., McDowell, B. E., Ptaszek, M., & Lindsey, J. S. (2009). Synthetic Chlorins Bearing Auxochromes at the 3- and 13-Positions. The Journal of Organic Chemistry, 74(14), 5122–5122. https://doi.org/10.1021/jo9010602

Taniguchi, M., Cramer, D. L., Bhise, A. D., Kee, H. L., Bocian, D. F., Holten, D., & Lindsey, J. S. (2008). Accessing the near-infrared spectral region with stable, synthetic, wavelength-tunable bacteriochlorins. NEW JOURNAL OF CHEMISTRY, 32(6), 947–958. https://doi.org/10.1039/b717803d

Jiao, J., Schmidt, I., Taniguchi, M., Lindsey, J. S., & Bocian, D. F. (2008). Comparison of Electron-Transfer Rates for Metal- versus Ring-Centered Redox Processes of Porphyrins in Monolayers on Au(111). LANGMUIR, 24(20), 12047–12053. https://doi.org/10.1021/la8019843

Song, H.-eun, Kirmaier, C., Taniguchi, M., Diers, J. R., Bocian, D. F., Lindsey, J. S., & Holten, D. (2008). Determination of Ground-State Hole-Transfer Rates Between Equivalent Sites in Oxidized Multiporphyrin Arrays Using Time-Resolved Optical Spectroscopy. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 130(46), 15636–15648. https://doi.org/10.1021/ja805673m

Lindsey, J. S., Taniguchi, M., Ra, D., Mo, G., & Balasubramanian, T. (2008). Refined routes to chlorin building blocks.

Kee, H. L., Kirmaier, C., Tang, Q., Diers, J. R., Muthiah, C., Taniguchi, M., … Holten, D. (2007). Effects of substituents on synthetic analogs of chlorophylls. Part 1: Synthesis, vibrational properties and excited-state decay characteristics. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 83(5), 1110–1124. https://doi.org/10.1111/j.1751-1097.2007.00150.x

Kee, H. L., Kirmaier, C., Tang, G., Diers, J. R., Muthiah, C., Taniguchi, M., … Hoten, D. (2007). Effects of substituents on synthetic analogs of chlorophylls. Part 2: Redox properties, optical spectra and electronic structure. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 83(5), 1125–1143. https://doi.org/10.1111/j.1751-1097.2007.00151.x

Stromberg, J. R., Marton, A., Kee, H. L., Kirmaier, C., Diers, J. R., Muthiah, C., … Holten, D. (2007). Examination of tethered porphyrin, chlorin, and bacteriochlorin molecules in mesoporous metal-oxide solar cells. JOURNAL OF PHYSICAL CHEMISTRY C, 111(42), 15464–15478. https://doi.org/10.1021/jp0749928

Dixon, J. M., Taniguchi, M., & Lindsey, J. S. (2007). PhotochemCAD 2: A Refined Program with Accompanying Spectral Databases for Photochemical Calculations¶. Photochemistry and Photobiology, 81(1), 212–213. https://doi.org/10.1111/j.1751-1097.2005.tb01544.x

Fan, D., Taniguchi, M., & Lindsey, J. S. (2007). Regioselective 15-bromination and functionalization of a stable synthetic bacteriochlorin. JOURNAL OF ORGANIC CHEMISTRY, 72(14), 5350–5357. https://doi.org/10.1021/jo070785s

Ptaszek, M., McDowell, B. E., Taniguchi, M., Kim, H.-J., & Lindsey, J. S. (2007). [Review of Sparsely substituted chlorins as core constructs in chlorophyll analogue chemistry. Part 1: Synthesis]. TETRAHEDRON, 63(18), 3826–3839. https://doi.org/10.1016/j.tet.2007.02.038

Taniguchi, M., Ptaszek, M., McDowell, B. E., & Lindsey, J. S. (2007). Sparsely substituted chlorins as core constructs in chlorophyll analogue chemistry. Part 2: Derivatization. TETRAHEDRON, 63(18), 3840–3849. https://doi.org/10.1016/j.tet.2007.02.076

Taniguchi, M., Ptaszek, M., McDowell, B. E., Boyle, P. D., & Lindsey, J. S. (2007). Sparsely substituted chlorins as core constructs in chlorophyll analogue chemistry. Part 3: Spectral and structural properties. TETRAHEDRON, 63(18), 3850–3863. https://doi.org/10.1016/j.tet.2007.02.040

Muthiah, C., Taniguchi, M., Kim, H.-J., Schmidt, I., Kee, H. L., Holten, D., … Lindsey, J. S. (2007). Synthesis and photophysical characterization of porphyrin, chlorin and bacteriochlorin molecules bearing tethers for surface attachment. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 83(6), 1513–1528. https://doi.org/10.1111/j.1751-1097.2007.00195.x

Laha, J. K., Muthiah, C., Taniguchi, M., & Lindsey, J. S. (2006). A new route for installing the isocyclic ring on chlorins yielding 13(1)-oxophorbines. JOURNAL OF ORGANIC CHEMISTRY, 71(18), 7049–7052. https://doi.org/10.1021/jo0608265

Thamyongkit, P., Bhise, A. D., Taniguchi, M., & Lindsey, J. S. (2006). Alkylthio unit as an alpha-pyrrole protecting group for use in dipyrromethane synthesis. JOURNAL OF ORGANIC CHEMISTRY, 71(3), 903–910. https://doi.org/10.1021/jo051806q

Bhaumik, J., Yao, Z., Borbas, K. E., Taniguchi, M., & Lindsey, J. S. (2006). Masked imidazolyl-dipyrromethanes in the synthesis of imidazole-substituted porphyrins. JOURNAL OF ORGANIC CHEMISTRY, 71(23), 8807–8817. https://doi.org/10.1021/jo061461r

Lindsey, J. S., Dhanalekshmi, S., Laha, J. K., & Taniguchi, M. (2006). Scalable synthesis of dipyrromethanes. Washington, DC: U.S. Patent and Trademark Office.

Laha, J. K., Muthiah, C., Taniguchi, M., McDowell, B. E., Ptaszek, M., & Lindsey, J. S. (2006). Synthetic chlorins bearing auxochromes at the 3- and 13-positions. JOURNAL OF ORGANIC CHEMISTRY, 71(11), 4092–4102. https://doi.org/10.1021/jo060208o

Fan, D. Z., Taniguchi, M., Yao, Z., Dhanalekshmi, S., & Lindsey, J. S. (2005). 1,9-bis(N,N-dimethylaminomethyl)dipyrromethanes in the synthesis of porphyrins bearing one or two meso substituents. TETRAHEDRON, 61(43), 10291–10302. https://doi.org/10.1016/j.tet.2005.08.028

Taniguchi, M., Balakumar, A., Fan, D. Z., McDowell, B. E., & Lindsey, J. S. (2005). Imine-substituted dipyrromethanes in the synthesis of porphyrins bearing one or two meso substituents. JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, 9(8), 554–574. https://doi.org/10.1142/S1088424605000678

Taniguchi, M., Kim, M. N., Ra, D., & Lindsey, J. S. (2005). Introduction of a third meso substituent into 5,10-diaryl chlorins and oxochlorins. JOURNAL OF ORGANIC CHEMISTRY, 70(1), 275–285. https://doi.org/10.1021/jo048440m

Dixon, J. M., Taniguchi, M., & Lindsey, J. S. (2005). PhotochemCAD 2: A Refined Program with Accompanying Spectral Databases for Photochemical Calculations. PHOTOCHEMISTRY AND PHOTOBIOLOGY, 81(1), 212–213. https://doi.org/10.1562/2004-11-06-TSN-361.1

Lindsey, J. S., Taniguchi, M., Ra, D., M, G., & Balasubramanian, T. (2005). Refined routes to chlorin building blocks. Washington, DC: U.S. Patent and Trademark Office.

Ptaszek, M., Bhaumik, J., Kim, H. J., Taniguchi, M., & Lindsey, J. S. (2005). Refined synthesis of 2,3,4,5-tetrahydro-1,3,3-trimethyidipyrrin, a deceptively simple precursor to hydroporphyrins. ORGANIC PROCESS RESEARCH & DEVELOPMENT, 9(5), 651–659. https://doi.org/10.1021/op050087e

Tamaru, S., Yu, L. H., Youngblood, W. J., Muthukumaran, K., Taniguchi, M., & Lindsey, J. S. (2004). A tin-complexation strategy for use with diverse acylation methods in the preparation of 1,9-diacyldipyrromethanes. JOURNAL OF ORGANIC CHEMISTRY, 69(3), 765–777. https://doi.org/10.1021/jo035622s

Dixon, J. M., Taniguchi, M., & Lindsey, J. S. (2004). PhotochemCAD 2. A Refined Program with Accompanying Spectral Database for Photochemical Calculations. Photochemistry and Photobiology. https://doi.org/10.1562/2004-11-06-tsn-361

Hindin, E., Kirmaier, C., Diers, JR, Tomizaki, K. Y., Taniguchi, M., Lindsey, J. S., … Holten, D. (2004). Photophysical properties of phenylethyne-linked porphyrin and oxochlorin dyads. JOURNAL OF PHYSICAL CHEMISTRY B, 108(24), 8190–8200. https://doi.org/10.1021/jp037614l

Lindsey, J. S., Taniguchi, M., Prathapan, S., Kim, M. N., & Kim, H.-J. (2004). Regioisomerically pure oxochlorins and methods of synthesis. Washington, DC: U.S. Patent and Trademark Office.

Tomizaki, K., Lysenko, A. B., Taniguchi, M., & Lindsey, J. S. (2004). Synthesis of phenylethyne-linked porphyrin dyads. TETRAHEDRON, 60(9), 2011–2023. https://doi.org/10.1016/j.tet.2004.01.003

Laha, J. K., Dhanalekshmi, S., Taniguchi, M., Ambroise, A., & Lindsey, J. S. (2003). A scalable synthesis of meso-substituted dipyrromethanes. ORGANIC PROCESS RESEARCH & DEVELOPMENT, 7(6), 799–812. https://doi.org/10.1021/op034083q

Taniguchi, M., Ra, D., Kirmaier, C., Hindin, E., Schwartz, J. K., Diers, JR, … Holten, D. (2003). Comparison of excited-state energy transfer in arrays of hydroporphyrins (chlorins, oxochlorins) versus porphyrins: Rates, mechanisms, and design criteria. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 125(44), 13461–13470. https://doi.org/10.1021/ja035987u

Kirmaier, C., Hindin, E., Schwartz, J. K., Sazanovich, IV, Diers, JR, Muthukumaran, K., … Holten, D. (2003). Synthesis and excited-state photodynamics of perylene-bis(imide)-oxochlorin dyads. A charge-separation motif. JOURNAL OF PHYSICAL CHEMISTRY B, 107(15), 3443–3454. https://doi.org/10.1021/jp0269423

Taniguchi, M., Kim, H. J., Ra, D. Y., Schwartz, J. K., Kirmaier, C., Hindin, E., … Lindsey, J. S. (2002). Synthesis and electronic properties of regioisomerically pure oxochlorins. JOURNAL OF ORGANIC CHEMISTRY, 67(21), 7329–7342. https://doi.org/10.1021/jo025843i

Taniguchi, M., Ra, D., Mo, G., Balasubramanian, T., & Lindsey, J. S. (2001). Synthesis of meso-substituted chlorins via tetrahydrobilene-a intermediates. JOURNAL OF ORGANIC CHEMISTRY, 66(22), 7342–7354. https://doi.org/10.1021/jo0104835

Taniguchi, M., Thiemann, T., Sawada, T., & Mataka, S. (1999). Layered [3.3]Orthocyclophane Tricarbonylchromium Complexes. Zeitschrift Für Anorganische Und Allgemeine Chemie, 625(8), 1249–1251. https://doi.org/10.1002/(sici)1521-3749(199908)625:8<1249::aid-zaac1249>3.0.co;2-o

Isobe, S.-ichiro, Taniguchi, M., Sawada, T., Thiemann, T., Yonemitsu, T., & Mataka, S. (1999). Novel rearrangement of conformationally restrained [3.3]orthocyclophanes. Journal of the Chemical Society, Perkin Transactions 1, (15), 2101–2108. https://doi.org/10.1039/a903156a

Tsukamoto, K.-ichi, Sahade, D. A., Taniguchi, M., Sawada, T., Thiemann, T., & Mataka, S. (1999). Synthesis of 8,16-dimethyl- and 8,16-dimethoxy-5,13-di-t-butyl[2.2]metacyclophane-1,2,9,10-tetraone. Tetrahedron Letters, 40(25), 4691–4692. https://doi.org/10.1016/s0040-4039(99)00845-x

Thiemann, T., Ohira, D., Li, Y., Sawada, T., Taniguchi, M., Tashiro, M., & Mataka, S. (1999). Thieno[3.3]orthocyclophanes: preparations and structures. New Journal of Chemistry, 23(7), 675–678. https://doi.org/10.1039/a903746b

Mataka, S., Mitoma, Y., Sawada, T., Thiemann, T., Taniguchi, M., & Tashiro, M. (1998). Benzo[3.3]benzo[3.3]benzo- and naphtho[3.3]benzo[3.3]naphtho-orthocyclophane bis(alcohol)s. Preparations and structures. Tetrahedron, 54(20), 5171–5186. https://doi.org/10.1016/s0040-4020(98)00217-8

Mataka, S., Shigaki, K., Sawada, T., Mitoma, Y., Taniguchi, M., Thiemann, T., … Egashira, N. (1998). Quadrupeldecker-[3.3][3.3][3.3]Orthocyclophanacetal: eine Orthocyclophan-Leiter. Angewandte Chemie, 110(18), 2626–2628. https://doi.org/10.1002/(sici)1521-3757(19980918)110:18<2626::aid-ange2626>3.0.co;2-s

Mataka, S., Shigaki, K., Sawada, T., Mitoma, Y., Taniguchi, M., Thiemann, T., … Egashira, N. (1998). Quadruple Decker [3.3][3.3][3.3]Orthocyclophane Acetal—An Orthocyclophane Ladder. Angewandte Chemie International Edition, 37(18), 2532–2534. https://doi.org/10.1002/(sici)1521-3773(19981002)37:18<2532::aid-anie2532>3.0.co;2-r

Hashimoto, K., Hatano, K., Minabe, Y., Iyo, M., Taniguchi, M., Hoshino, O., … Kawasumi, Y. (1998). Radiosynthesis of [18F]N-(4-phenylbutyl)-4-(4-fluorobenzoyl)piperidine for studying serotonin 5-HT2a receptors. Journal of Labelled Compounds and Radiopharmaceuticals, 41(10), 941–949. https://doi.org/10.1002/(sici)1099-1344(1998100)41:10<941::aid-jlcr151>3.0.co;2-6

Taniguchi, M., Mataka, S., Thiemann, T., Sawada, T., Mimura, K., & Mitoma, Y. (1998). The Study of π–π Interaction in Layered [3.3]Orthocyclophanes. Charge-Transfer Complexes of [3.3]Orthocyclophanes with Tetracyanoethylene. Bulletin of the Chemical Society of Japan, 71(11), 2661–2668. https://doi.org/10.1246/bcsj.71.2661

Mataka, S., Mitoma, Y., Thiemann, T., Sawada, T., Taniguchi, M., Kobuchi, M., & Tashiro, M. (1997). Bisacetals of aromatic ring-annelated . [3.3][3.3]Orthocyclophanes with triple-layered benzo/benzo/benzo- and naphtho/benzo/naphtho-system. Tetrahedron, 53(9), 3015–3026. https://doi.org/10.1016/s0040-4020(97)00042-2

Mataka, S., Sawada, T., Tashiro, M., Taniguchi, M., & Mitroma, Y. (1997). Conformational Analysis of Spirocyclopropane- and Spirooxirane-annelated Dibenzobicyclo[4.4.1]undecanes by 1H NMR Spectroscopy and X-Ray Crystallography. Journal of Chemical Research, (2), 48–49. https://doi.org/10.1039/a604939g

Mataka, S., Mitoma, Y., Sawada, T., & Tashiro, M. (1996). Triple-layered orthonaphtho[3.3]orthobenzeno[3.3]orthonaphthophane. Tetrahedron Letters, 37(1), 65–68. https://doi.org/10.1016/0040-4039(95)02103-5