Nicolas Emile Buchler

Diploid-dominant life cycles characterize the early evolution of Fungi

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 119(36).

Gene expression noise accelerates the evolution of a biological oscillator

Lin, Y. T., & Buchler, N. E. (2022, March 23). (Vol. 3). Vol. 3.

Competition for DNA binding between paralogous transcription factors determines their genomic occupancy and regulatory functions

GENOME RESEARCH, 31(7), 1216-+.

Chytrid fungi.

Current Biology : CB, 5.

Genetic transformation of Spizellomyces punctatus, a resource for studying chytrid biology and evolutionary cell biology

ELife.

Enhancer Histone Acetylation Modulates Transcriptional Bursting Dynamics of Neuronal Activity-Inducible Genes

CELL REPORTS, 26(5), 1174-+.

Epigenetic switching as a strategy for quick adaptation while attenuating biochemical noise

PLOS COMPUTATIONAL BIOLOGY, 15(10).

Evolutionary innovation, fungal cell biology, and the lateral gene transfer of a viral KilA-N domain

[Review of ]. CURRENT OPINION IN GENETICS & DEVELOPMENT, 58-59, 103–110.

Exact and efficient hybrid Monte Carlo algorithm for accelerated Bayesian inference of gene expression models from snapshots of single-cell transcripts

The Journal of Chemical Physics.

Recognition of Histone Crotonylation by Taf14 Links Metabolic State to Gene Expression

MOLECULAR CELL, 76(6), 909-+.

Daily humidity oscillation regulates the circadian clock to influence plant physiology

NATURE COMMUNICATIONS, 9.

Efficient analysis of stochastic gene dynamics in the non-adiabatic regime using piecewise deterministic Markov processes

Journal of The Royal Society Interface, 15(138), 20170804.

The evolution of a G1/S transcriptional network in yeasts

Current Genetics, 64(1), 81–86.

BayFish: Bayesian inference of transcription dynamics from population snapshots of single-molecule RNA FISH in single cells

Genome Biology, 18(1).

Conservation and divergence of C-terminal domain structure in the retinoblastoma protein family

Proceedings of the National Academy of Sciences, 114(19), 4942–4947.

Gene duplication and co-evolution of G1/S transcription factor specificity in fungi are essential for optimizing cell fitness

PLOS Genetics, 13(5), e1006778.

Long-term growth data of Escherichia coli at a single-cell level

Scientific Data.

Cell cycle Start is coupled to entry into the yeast metabolic cycle across diverse strains and growth rates.

Molecular Biology of the Cell, 27(1), 64–74,

Punctuated evolution and transitional hybrid network in an ancestral cell cycle of fungi

ELife, 5.

The Physarum polycephalum Genome Reveals Extensive Use of Prokaryotic Two-Component and Metazoan-Type Tyrosine Kinase Signaling

Genome Biology and Evolution, 8(1), 109–125,

A noisy linear map underlies oscillations in cell size and gene expression in bacteria

Nature, 523(7560), 357–360.

Different mechanisms confer gradual control and memory at nutrient- and stress-regulated genes in yeast

Molecular and Cellular Biology, 35(21), 3669–3683.

Redox rhythm reinforces the circadian clock to gate immune response

Nature, 523(7561), 472–476.

Role of DNA binding sites and slow unbinding kinetics in titration-based oscillators.

Physical Review E, 92(6), 062712,

Measuring fast gene dynamics in single cells with time-lapse luminescence microscopy

Molecular Biology of the Cell, 25(22), 3699–3708.

Two-Faced Cyclins with Eyes on the Targets

Cell Cycle, 4(1), 125–130.

Programming stress-induced altruistic death in engineered bacteria

Molecular Systems Biology, 8.

Chromatin: Bind at your own RSC

Current Biology, 21(6).

Evolution of networks and sequences in eukaryotic cell cycle control

Philosophical Transactions of the Royal Society B: Biological Sciences, 366(1584), 3532–3544.

Protein sequestration generates a flexible ultrasensitive response in a genetic network

Molecular Systems Biology, 5.

Molecular Titration and Ultrasensitivity in Regulatory Networks

Journal of Molecular Biology, 384(5), 1106–1119.

Designing sequential transcription logic: A simple genetic circuit for conditional memory

Systems and Synthetic Biology, 1(2), 89–98.

Nonlinear protein degradation and the function of genetic circuits

Proceedings of the National Academy of Sciences of the United States of America, 102(27), 9559–9564.

Transcriptional regulation by the numbers: Applications

Current Opinion in Genetics and Development, 15(2), 125–135.

Transcriptional regulation by the numbers: Models

Current Opinion in Genetics and Development, 15(2), 116–124.

Two-faced cyclins with eyes on the targets

Cell Cycle, 4(1), 125–130. http://www.scopus.com/inward/record.url?eid=2-s2.0-14844287697&partnerID=MN8TOARS

On schemes of combinatorial transcription logic

Proceedings of the National Academy of Sciences of the United States of America, 100(9), 5136–5141.

Surveying determinants of protein structure designability across different energy models and amino-acid alphabets: A consensus

The Journal of Chemical Physics.

Effect of alphabet size and foldability requirements on protein structure designability

Proteins: Structure, Function and Genetics, 34(1), 113–124.

Universal correlation between energy gap and foldability for the random energy model and lattice proteins

The Journal of Chemical Physics.

Protein Heteronuclear NMR Assignments Using Mean-Field Simulated Annealing

Journal of Magnetic Resonance, 125(1), 34–42.

Protein Heteronuclear NMR Assignments Using Mean-Field Simulated Annealing

Journal of Magnetic Resonance.

BL HERCULIS MODEL PULSATIONS .3. LIVERMORE OPACITIES

Astronomy & Astrophysics. https://publons.com/publon/51431452/