Nelson Rodrigo Vinueza Benitez

Aurora 2.0: A fluorogenic dye library for expanding the capability of protein-adaptive differential scanning fluorimetry (paDSF)

Charvat, A. F., Mason-Chalmers, K., Grabinska-Rogala, A., Shivakumar, S., Gale-Day, Z., Wu, T., … Gestwicki, J. E. (2025, August 8). SLAS DISCOVERY, Vol. 8.

BPS2025 - Expansion of a chemically diverse fluoroprobe library to further utilize protein-adaptive differential scanning fluorimetry (paDSF)

Charvat, A. F., Mason-Chalmers, K., Shivakumar, S., Carroll, E., Nilsson, P., Lavis, L. D., … Gestwicki, J. E. (2025, February 1). Biophysical Journal, Vol. 124, pp. 390A–390A.

High-Contrast Aptamer-Based Merocyanine Displacement Assays for Sensitive Small Molecule Detection

Nguyen, T., Alkhamis, O., Bacon, A., Bukhryakov, K. V., Vinueza, N. R., & Xiao, Y. (2025, October 13). ACS Sensors, Vol. 10.

High-throughput discovery of fluoroprobes that recognize amyloid fibril polymorphs

Carroll, E. C., Yang, H., Powell, W. C., Charvat, A. F., Oehler, A., Jones, J. G., … Gestwicki, J. E. (2025, August 14). Nature Chemistry, Vol. 8.

Impaired cell viability and mitochondrial respiration by disperse textile dyes

Cortes, L. M., & Vinueza, N. R. (2025, April 24). Frontiers in Allergy, Vol. 6.

Solvatochromic BODIPYs with Polarity-Independent Absorption for Functional Super-resolution Imaging of Live Cell Membranes

Liu, Y., Gong, X., Yoder, B., Gluck, J. M., Vinueza, N. R., Liu, X., & Zhang, Y. (2025, November 18). Chemical & Biomedical Imaging.

The importance of the YG1041 Salmonella strain in the mutagenicity characterization of azo dyes

Militão, G. F. G., Albuquerque, A. F., Vinueza, N. R., Botelho, M. T., & Aragão Umbuzeiro, G. (2025, April 4). Food and Chemical Toxicology, Vol. 200.

Exploration of the binding determinants of protein phosphatase 5 (PP5) reveals a chaperone-independent activation mechanism

Devi, S., Charvat, A., Millbern, Z., Vinueza, N., & Gestwicki, J. E. (2024, June 1). Journal of Biological Chemistry, Vol. 300.

Protein-adaptive differential scanning fluorimetry using conformationally responsive dyes

Wu, T., Yu, J. C., Suresh, A., Gale-Day, Z. J., Alteen, M. G., Woo, A. S., … Gestwicki, J. E. (2024, May 14). Nature Biotechnology, Vol. 5.

The Role of Textile Dyes in the Immune System Dysregulation

-Cortes, L. L., & Vinueza-Benitez, N. (2024, May 1). The Journal of Immunology, Vol. 212.

Quantification of docusate antimicrobial finishing after simulated landfill degradationviatandem mass spectrometry and QuEChERS extraction

Sui, X., Feng, C., Ankeny, M., & Vinueza, N. R. (2022, January 1). Analytical Methods, Vol. 10.

Synthetic dyes: A mass spectrometry approach and applications

Millbern, Z., Trettin, A., Wu, R., Demmler, M., & Vinueza, N. R. (2022, November 10). Mass Spectrometry Reviews, Vol. 11.

The characterization of disperse dyes in polyester fibers using DART mass spectrometry

Millbern, Z., & Vinueza, N. R. (2022, September 4). Journal of Forensic Sciences, Vol. 9.

Are all charge-transfer parameters created equally? A study of functional dependence and excited-state charge-transfer quantification across two dye families

Marshburn, R. D., Ashley, D. C., Curtin, G. M., Sultana, N., Liu, C., Vinueza, N. R., … Jakubikova, E. (2021, January 1). Physical Chemistry Chemical Physics, Vol. 8.

Identification and quantification of CI Reactive Blue 19 dye degradation product in soil

Feng, C., Sui, X., Ankeny, M. A., & Vinueza, N. R. (2021, January 21). Coloration Technology, Vol. 137, pp. 251–258.

Molecular characterization and ecotoxicological evaluation of the natural dye madder and its chlorinated products

Freeman, H. S., Santos, T. C., Chen, Y., Vendemiatti, J. A. S., Oliveira, A. C., Vacchi, F. I., … Umbuzeiro, G. A. (2021, November 25). Environmental Science and Pollution Research, Vol. 11.

Separation and identification of commercial reactive dyes with hydrophilic interaction liquid chromatography and quadrupole time‐of‐flight mass spectrometry

Coloration Technology, 137(4), 407–417.

A promising Ames battery for mutagenicity characterization of new dyes

Umbuzeiro, G. A., Morales, D. A., Vacchi, F. I., Albuquerque, A. F., Szymczyk, M., Sui, X., … Freeman, H. S. (2020, November 30). Environmental and Molecular Mutagenesis.

Characterization of synthetic dyes for environmental and forensic assessments: A chromatography and mass spectrometry approach

Journal of Separation Science, 44(1), 387–402.

Degradation studies of CI Reactive Blue 19 on biodegraded cellulosic fabrics via liquid chromatography‐photodiode array detection coupled to high resolution mass spectrometry

Sultana, N., Williams, K., Ankeny, M., & Vinueza, N. R. (2019, October 17). Coloration Technology.

Nanostructured GaOOH modified with reactive yellow, red and blue water-soluble dyes

Adams, W. T., Vinueza, N. R., Romanyuk, O., Gordeev, I., Paskova, T., & Ivanisevic, A. (2019, February 1). AIP Advances, Vol. 9.

Towards a reliable prediction of the aquatic toxicity of dyes

A. Umbuzeiro Gisela, Albuquerque, A. F., Vacchi, F. I., Szymczyk, M., Sui, X., Aalizadeh, R., … Freeman, H. S. (2019, October 8). Environmental Sciences Europe, Vol. 31.

Correlation between solubility parameters and recovery of phenolic compounds from fast pyrolysis bio-oil by diesel extraction

Carbon Resources Conversion, 1(3), 238–244.

Dimerised heterobifunctional reactive dyes. Part 1: characterisation using quadrupole time-of-flight mass spectrometry

Coloration Technology, 134(6), 470–477.

Direct analysis of textile dyes from trace fibers by automated microfluidics extraction system coupled with Q-TOF mass spectrometer for forensic applications

Forensic Science International, 289, 67–74.

Effects of hydrogen bonding on the gas-phase reactivity of didehydroisoquinolinium cation isomers

Physical Chemistry Chemical Physics, 20(33), 21567–21572.

Mass Spectrometry Exposes Undocumented Lignin-Carbohydrate Complexes in Biorefinery Pretreatment Stream

ACS Sustainable Chemistry & Engineering, 6(8), 10654–10659.

Purification and characterization of three commercial phenylazoaniline disperse dyes

Coloration Technology, 133(6), 513–518.

Rapid Quadrupole-Time-of-Flight Mass Spectrometry Method Quantifies Oxygen-Rich Lignin Compound in Complex Mixtures

Boes, K. S., Roberts, M. S., & Vinueza, N. R. (2017, December 12). Journal of the American Society for Mass Spectrometry, Vol. 29, pp. 535–542.

Weaver's historic accessible collection of synthetic dyes: a cheminformatics analysis

Kuenemann, M. A., Szymczyk, M., Chen, Y., Sultana, N., Hinks, D., Freeman, H. S., … Vinueza, N. R. (2017, January 1). Chemical Science, Vol. 8, pp. 4334–4339.

Characterization of biofuel refinery byproduct via selective electrospray ionization tandem mass spectrometry

Boes, K. S., Narron, R. H., Chen, Y., Park, S., & Vinueza, N. R. (2016, October 12). Fuel, Vol. 188, pp. 190–196.

Microfluidic System for Automated Dye Molecule Extraction and Detection for Forensic Fiber Identification

[National Criminal Justice Report].

The Art of Color in Solving Mysteries and Crime

[National Chemistry Week brochure]. American Chemical Society.

Analysis of Sulfonated Anthraquinone Dyes by Electrospray Ionization Quadrupole Time-of-flight Tandem Mass Spectrometry

Journal of Textile Science & Engineering, 06(01).

Functional dye as a comonomer in a water-soluble polymer

Journal of Polymer Science Part A: Polymer Chemistry, 53(13), 1594–1599.

Reactivity Controlling Factors for an Aromatic Carbon‐Centered σ,σ,σ‐Triradical: The 4,5,8‐Tridehydroisoquinolinium Ion

Vinueza, N. R., Jankiewicz, B. J., Gallardo, V. A., LaFavers, G. Z., DeSutter, D., Nash, J. J., & Kenttämaa, H. I. (2015, November 23). Chemistry - A European Journal, Vol. 22, pp. 809–815.

Tandem mass spectrometric characterization of the conversion of xylose to furfural

Biomass and Bioenergy, 74, 1–5.

Analysis of xyloglucans by ambient chloride attachment ionization tandem mass spectrometry

Carbohydrate Polymers, 98(1), 1203–1213.

Does the 2,6-didehydropyridinium cation exist?

Journal of Physical Organic Chemistry, 26(9), 707–714.

Experimental and Computational Studies on the Formation of Threepara-Benzyne Analogues in the Gas Phase

Chemistry - A European Journal, 19(27), 9022–9033.

On-Line Mass Spectrometric Methods for the Determination of the Primary Products of Fast Pyrolysis of Carbohydrates and for Their Gas-Phase Manipulation

Analytical Chemistry, 85(22), 10927–10934.

Analysis of carbohydrates by atmospheric pressure chloride anion attachment tandem mass spectrometry

Fuel, 105, 235–246.

Identification and Counting of Oxygen Functionalities and Alkyl Groups of Aromatic Analytes in Mixtures by Positive-Mode Atmospheric Pressure Chemical Ionization Tandem Mass Spectrometry Coupled with High-Performance Liquid Chromatography

Energy & Fuels, 26(5), 2975–2989.

Reactivity of a σ,σ,σ,σ-Tetraradical: The 2,4,6-Tridehydropyridine Radical Cation

Journal of the American Chemical Society, 134(4), 1926–1929.

Reactivity of the 4,5-Didehydroisoquinolinium Cation

Chemistry - A European Journal, 18(28), 8692–8698.

Substituent Effects on the Nonradical Reactivity of 4-Dehydropyridinium Cation

The Journal of Physical Chemistry A, 116(12), 3089–3093.

Comparison of Functional Group Selective Ion–Molecule Reactions of Trimethyl Borate in Different Ion Trap Mass Spectrometers

Journal of The American Society for Mass Spectrometry, 22(3), 520–530.

Effects of a Hydroxyl Substituent on the Reactivity of the 2,4,6-Tridehydropyridinium Cation, an Aromatic σ,σ,σ-Triradical

Chemistry - A European Journal, 18(3), 969–974.

Data-dependent neutral gain MS3: Toward automated identification of the N-Oxide functional group in drug metabolites

Journal of the American Society for Mass Spectrometry, 21(4), 559–563.

Laser-Induced Acoustic Desorption Coupled with a Linear Quadrupole Ion Trap Mass Spectrometer

Analytical Chemistry, 82(2), 608–614.

Liquid chromatography/tandem mass spectrometry utilizing ion-molecule reactions and collision-activated dissociation for the identification of N-oxide drug metabolites

Journal of Pharmaceutical and Biomedical Analysis, 51(4), 805–811.

Gas-Phase Reactivity of Aromatic σ,σ-Biradicals toward Dinucleoside Phosphates

Organic Letters, 10(10), 1889–1892.

Identification of the Carboxylic Acid Functionality by Using Electrospray Ionization and Ion−Molecule Reactions in a Modified Linear Quadrupole Ion Trap Mass Spectrometer

Analytical Chemistry, 80(9), 3416–3421.

Reactivity of the 3,4,5-Tridehydropyridinium Cation-An Aromatic σ,σ,σ-Triradical

Angewandte Chemie, 120(51), 10008–10013.

Reactivity of the 3,4,5-Tridehydropyridinium Cation-An Aromatic σ,σ,σ-Triradical

Angewandte Chemie International Edition, 47(51), 9860–9865.

Regioselective ion–molecule reactions for the mass spectrometric differentiation of protonated isomeric aromatic diamines

The Analyst, 133(4), 452.

Reactivity of an Aromatic σ,σ,σ-Triradical: The 2,4,6-Tridehydropyridinium Cation

Angewandte Chemie, 119(48), 9358–9361.

Reactivity of an Aromatic σ,σ,σ-Triradical: The 2,4,6-Tridehydropyridinium Cation

Angewandte Chemie International Edition, 46(48), 9198–9201.