Philip Loziuk
Works (13)
Updated: August 18th, 2023 21:18
2021 journal article
Enzyme Complexes of Ptr4CL and PtrHCT Modulate Co-enzyme A Ligation of Hydroxycinnamic Acids for Monolignol Biosynthesis in Populus trichocarpa
FRONTIERS IN PLANT SCIENCE, 12.
author keywords: protein interaction; monolignol biosynthesis; wood formation; Populus trichocarpa; BiFC; metabolic flux
www.frontiersin.org (publisher PDF)
Sources: Web Of Science, ORCID
Added: November 8, 2021
2019 journal article
Label-Free Quantitative Proteomics of Enriched Nuclei from Sugarcane (Saccharum ssp) Stems in Response to Drought Stress
PROTEOMICS, 19(14).
author keywords: drought; RNA regulation; Saccharum spp; shotgun proteomics; transcription factors
MeSH headings : Droughts; Gene Expression Regulation, Plant; Plant Proteins / metabolism; Proteomics; Saccharum / metabolism
Sources: Web Of Science, ORCID
Added: July 22, 2019
2019 journal article
Quantitative proteomic analysis of tomato genotypes with differential cadmium tolerance
ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH, 26(25), 26039–26051.
author keywords: Root proteome; Cd stress; Antioxidant; Redox; Cell wall; Metabolism
MeSH headings : Cadmium / chemistry; Cadmium / metabolism; Cell Wall / metabolism; Drug Tolerance; Genotype; Solanum lycopersicum / metabolism; Plant Roots / metabolism; Proteome / chemistry; Proteome / metabolism; Proteomics; Stress, Physiological / drug effects
Sources: Web Of Science, ORCID
Added: September 23, 2019
2017 journal article
N-linked glycosite profiling and use of Skyline as a platform for characterization and relative quantification of glycans in differentiating xylem of Populus trichocarpa
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 409(2), 487–497.
author keywords: N-linked glycosite; Skyline; Populus trichocarpa; Monolignol; N-linked glycans
MeSH headings : Computational Biology / standards; Computational Biology / trends; Polysaccharides / analysis; Populus / chemistry; Xylem / chemistry
Sources: Web Of Science, ORCID
Added: August 6, 2018
2017 journal article
Xylose Migration During Tandem Mass Spectrometry of N-Linked Glycans
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 28(4), 729–732.
author keywords: Xylose migration; MS/MS; Glycomics; N-linked glycans; Plants
Sources: Web Of Science, ORCID
Added: August 6, 2018
2016 journal article
Examining ubiquitinated peptide enrichment efficiency through an epitope labeled protein
ANALYTICAL BIOCHEMISTRY, 512, 114–119.
author keywords: Ubiquitination; Gly-Gly enrichment; Enrichment efficiency
MeSH headings : Antibodies, Monoclonal, Murine-Derived / chemistry; Epitopes / chemistry; Muramidase / chemistry; Ubiquitinated Proteins / chemistry; Ubiquitination
Sources: Web Of Science, ORCID
Added: August 6, 2018
2016 journal article
TransOmic analysis of forebrain sections in Sp2 conditional knockout embryonic mice using IR-MALDESI imaging of lipids and LC-MS/MS label-free proteomics
Analytical and Bioanalytical Chemistry, 408(13), 3453–3474.
author keywords: IR-MALDESI; Proteomics; Lipidomics; Mass spectrometry imaging; Embryonic brain
MeSH headings : Animals; Chromatography, Liquid / methods; Lipids / analysis; Mass Spectrometry / methods; Mice; Mice, Knockout; Prosencephalon / embryology; Prosencephalon / metabolism; Sp2 Transcription Factor / genetics; Spectrophotometry, Infrared / methods; Transcriptome
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018
2015 journal article
4-Coumaroyl and Caffeoyl Shikimic Acids Inhibit 4-Coumaric Acid: Coenzyme A Ligases and Modulate Metabolic Flux for 3-Hydroxylation in Monolignol Biosynthesis of Populus trichocarpa
MOLECULAR PLANT, 8(1), 176–187.
author keywords: monolignol biosynthesis; Populus trichocarpa; metabolic flux; reaction and inhibition kinetics; LC-MS/MS; 4-coumaroyl and caffeoyl shikimic acids
MeSH headings : Acyl Coenzyme A / metabolism; Coenzyme A Ligases / metabolism; Coumaric Acids / metabolism; Coumaric Acids / pharmacology; Hydroxylation / drug effects; Plant Proteins / metabolism; Populus / drug effects; Populus / enzymology; Populus / metabolism; Propionates; Shikimic Acid / pharmacology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
Elucidation of Xylem-Specific Transcription Factors and Absolute Quantification of Enzymes Regulating Cellulose Biosynthesis in Populus trichocarpa
JOURNAL OF PROTEOME RESEARCH, 14(10), 4158–4168.
author keywords: shotgun discovery proteomics; absolute quantification; PC-IDMS; cellulose biosynthesis; transcription factor; targeted mass spectrometiry; SRM
MeSH headings : Carbohydrate Metabolism; Cellulose / biosynthesis; Cellulose / genetics; Chromatography, Liquid; Gene Expression Regulation, Plant; Molecular Sequence Annotation; Plant Proteins / genetics; Plant Proteins / isolation & purification; Plant Proteins / metabolism; Populus / genetics; Populus / metabolism; Proteome / genetics; Proteome / isolation & purification; Proteome / metabolism; Proteomics; Tandem Mass Spectrometry; Transcription Factors / genetics; Transcription Factors / isolation & purification; Transcription Factors / metabolism; Wood / chemistry; Wood / metabolism; Xylem / genetics; Xylem / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
Mechanisms of Egg Yolk Formation and Implications on Early Life History of White Perch (Morone americana)
PLOS ONE, 10(11).
MeSH headings : Animals; Bass / metabolism; Blotting, Western; Chromatography, Liquid; Egg Proteins / metabolism; Egg Yolk / metabolism; Female; Immunohistochemistry; Oocytes / cytology; Oocytes / metabolism; Ovary / cytology; Receptors, Cell Surface / metabolism; Sexual Maturation; Staining and Labeling; Tandem Mass Spectrometry; Vitellogenins / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2014 journal article
Establishing ion ratio thresholds based on absolute peak area for absolute protein quantification using protein cleavage isotope dilution mass spectrometry
ANALYST, 139(21), 5439–5450.
MeSH headings : Chromatography, Liquid; Isotopes / chemistry; Proteins / analysis; Tandem Mass Spectrometry / methods
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Enzyme-Modified Carbon-Fiber Microelectrode for the Quantification of Dynamic Fluctuations of Nonelectroactive Analytes Using Fast-Scan Cyclic Voltammetry
ANALYTICAL CHEMISTRY, 85(18), 8780–8786.
MeSH headings : Animals; Biosensing Techniques / methods; Carbon / chemistry; Carbon Fiber; Electrochemical Techniques / methods; Enzyme Induction; Male; Microelectrodes; Rats; Rats, Sprague-Dawley; Time Factors
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Understanding the Role of Proteolytic Digestion on Discovery and Targeted Proteomic Measurements Using Liquid Chromatography Tandem Mass Spectrometry and Design of Experiments
JOURNAL OF PROTEOME RESEARCH, 12(12), 5820–5829.
author keywords: design of experiments; proteolytic digestion; LC-MS/MS; Populus trichocarpa
MeSH headings : Amino Acid Sequence; Animals; Cattle; Chromatography, Liquid / standards; Factor Analysis, Statistical; Hydrogen-Ion Concentration; Isotope Labeling; Molecular Sequence Annotation; Molecular Sequence Data; Peptide Fragments / chemistry; Peptide Fragments / isolation & purification; Plant Proteins / chemistry; Plant Proteins / isolation & purification; Populus / chemistry; Protein Stability; Proteolysis; Proteomics / methods; Proteomics / standards; Research Design; Swine; Tandem Mass Spectrometry / standards; Trypsin / chemistry; Xylem / chemistry
Sources: Web Of Science, ORCID
Added: August 6, 2018
