Rebecca Whetten
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Works (33)
Updated: April 5th, 2024 01:22
2023 journal article
Two pathogen loci determine <i>Blumeria graminis
New Phytologist, 238(4), 1546–1561.
author keywords: Blumeria graminis; effector; genome-wide association study; host resistance; powdery mildew; Triticum aestivum; wheat
MeSH headings : Triticum / microbiology; Virulence / genetics; Genome-Wide Association Study; Plant Diseases / microbiology; Disease Resistance / genetics
TL;DR:
A genome-wide association study was conducted to map sequence variants associated with Pm1a virulence in 216 Bgt isolates from six countries, including the U.S; a co-expression study in Nicotiana benthamiana showed that BGTE-5612 and BGT-51526 each produce a PM1A-dependent hypersensitive response.
(via Semantic Scholar)
onlinelibrary.wiley.com (publisher PDF)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, ORCID, NC State University Libraries, Crossref
Added: March 19, 2023
2022 journal article
Sensitivity of the US Wheat Powdery Mildew Population to Quinone Outside Inhibitor Fungicides and Determination of the Complete Blumeria graminis f. sp. tritici Cytochrome b Gene
PHYTOPATHOLOGY, 112(2), 249–260.
author keywords: antimicrobial or fungicide resistance; disease control and pest management; fungal pathogens; genomics
MeSH headings : Ascomycota / genetics; Cytochromes b / genetics; Fungicides, Industrial / pharmacology; Plant Diseases / microbiology; Strobilurins; Triticum / microbiology
TL;DR:
This study was the first QoI sensitivity screening of a large, geographically diverse set of U.S. wheat isolates, and while the population as a whole remains relatively sensitive, some quantitative loss of efficacy was observed.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: April 4, 2022
2019 journal article
Registration of USDA‐N6003LP Soybean Germplasm with Low Seed Phytate
Journal of Plant Registrations, 13(3), 427–432.
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, NC State University Libraries, Crossref
Added: October 28, 2019
2018 journal article
Registration of Two Wheat Germplasm Lines Fixed for Pm58
JOURNAL OF PLANT REGISTRATIONS, 12(2), 270–273.
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
15. Life on Land
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: October 16, 2018
2017 journal article
Response of Turkish and Trojan fir to Phytophthora cinnamomi and P. cryptogea
Scandinavian Journal of Forest Research, 32(5), 406–411.
author keywords: Abies; disease resistance; North Carolina; root rot
TL;DR:
Rankings of resistance in fir species confirmed previous single-isolate-based results; momi fir was the most resistant, followed by Turkish, Trojan, and Fraser fir, while Turkish and Trojan fir families appear to possess resistance to Phytophthora species common in North Carolina.
(via Semantic Scholar)
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018
2015 journal article
Phylogenomics of polyploidy Fothergilla (Hamamelidaceae) by RAD-tag based GBS—Insights into species origin and effects of software pipelines
Journal of Systematics and Evolution, 53(5), 432–447.
author keywords: Fothergilla; hybridization; illumina sequencing; phylogenomics; RAD-tag-based GBS; polyploidy
TL;DR:
This study demonstrates the power of combining GBS data with Sanger sequencing in reconstructing the evolutionary network of polyploid lineages and shows substantial differences in inferred phylogenies.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water
(OpenAlex)
15. Life on Land
(Web of Science)
Sources: Web Of Science, NC State University Libraries, Crossref
Added: August 6, 2018
2014 journal article
Development of a genetic linkage map for Pinus radiata and detection of pitch canker disease resistance associated QTLs
Trees, 28(6), 1823–1835.
author keywords: Radiata pine; Fusarium circinatum; Linkage analysis; Quantitative resistance; Molecular markers
TL;DR:
It is demonstrated that there are at least 3 QTLs that could be involved in this resistance/susceptibility of radiata pine against Fusarium circinatum, and the results indicate that resistance to pitch canker is inherited from both parents.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
15. Life on Land
(Web of Science; OpenAlex)
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018
2014 journal article
Mapping the low palmitate fap1 mutation and validation of its effects in soybean oil and agronomic traits in three soybean populations
THEORETICAL AND APPLIED GENETICS, 127(1), 97–111.
MeSH headings : Blotting, Northern; Chromosome Mapping; Chromosomes, Plant; Genetic Association Studies; Palmitates / metabolism; Plant Proteins / genetics; Quantitative Trait Loci; Soybean Oil / chemistry; Soybeans / genetics; Soybeans / metabolism
TL;DR:
The fap1 phenotype is caused by a single unique SNP in the GmKASIIIA gene, and two major QTL for 16:0 content located in chromosome 5 (GmFATB1a, fapnc) and chromosome 9 near BARCSOYSSR_09_1707 that explained, with their interaction, 66–94 % of the variation in 16: 0 content in the three populations.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2013 journal article
Genomic Estimated Breeding Values Using Genomic Relationship Matrices in a Cloned Population of Loblolly Pine
G3: Genes|Genomes|Genetics, 3(5), 909–916.
author keywords: GenPred; Shared data resource; Pinus taeda quantitative genetics best linear unbiased prediction
MeSH headings : Breeding; Cloning, Molecular; Gene Frequency / genetics; Genetics, Population; Genome, Plant / genetics; Genomics / methods; Linear Models; Pinus taeda / genetics; Regression Analysis; Reproducibility of Results; Trees / genetics
TL;DR:
Estimation of genomic relationships could be a powerful tool in forest tree breeding because it accurately accounts both for genetic relationships among individuals and for nuisance effects such as location and replicate effects, and makes more accurate selection possible within full-sib crosses.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID, NC State University Libraries, Crossref
Added: August 6, 2018
2011 journal article
Association genetics of carbon isotope discrimination, height and foliar nitrogen in a natural population of Pinus taeda L
Heredity, 107(2), 105–114.
author keywords: water use efficiency; forest tree; population genetics; loblolly pine
MeSH headings : Carbon Isotopes / metabolism; Gene Frequency / genetics; Genes, Plant / genetics; Genetic Association Studies; Molecular Sequence Annotation; Nitrogen / metabolism; Phenotype; Pinus taeda / genetics; Pinus taeda / metabolism; Polymorphism, Single Nucleotide / genetics
TL;DR:
An association genetics approach was taken, using an unimproved population of 380 clonally replicated unrelated trees, to test 3938 single nucleotide polymorphisms in as many genes for association with phenotypic variation in carbon isotope discrimination, foliar nitrogen concentration and total tree height after two growing seasons.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018
2011 journal article
Molecular Analysis of GmFAD3A in Two Soybean Populations Segregating for the fan, fap1, and fap(nc) Loci
CROP SCIENCE, 51(5), 2104–2112.
TL;DR:
A reduction in the steady-state mRNA levels of the GmFAD3A leads to a reduction in 18:3 synthesis within the developing seed in plants containing the fan(PI 123440) allele.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(OpenAlex)
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2007 conference paper
Using markers in breeding, testing and selection in loblolly pine ? current and future research.
Conference Proceedings.
Source: NC State University Libraries
Added: August 6, 2018
2007 article
Using markers in breeding, testing and selection in loblolly pine: Current and future research
GENECAR Meeting: Application of DNA Based Tools for Genetic Research, Molecular Breeding, Management and Monitoring of Genetic Resources.
Source: NC State University Libraries
Added: August 6, 2018
2004 journal article
An auxin-inducible gene from loblolly pine ( Pinus taeda L.) is differentially expressed in mature and juvenile-phase shoots and encodes a putative transmembrane protein
Planta, 218(6), 916–927.
author keywords: adventitious root formation; auxin; gene expression (5NG4); maturation; nodulin; Pinus
MeSH headings : Amino Acid Sequence; Arabidopsis / genetics; Down-Regulation; Gene Expression Regulation, Plant; Indoleacetic Acids / metabolism; Indoleacetic Acids / pharmacology; Molecular Sequence Data; Phylogeny; Pinus taeda / genetics; Pinus taeda / metabolism; Plant Proteins / genetics; Plant Proteins / metabolism; Plant Shoots / growth & development; Plant Shoots / metabolism; Sequence Alignment; Sequence Homology, Amino Acid
UN Sustainable Development Goal Categories
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018
2004 journal article
Gene Expression during Formation of Earlywood and Latewood in Loblolly Pine: Expression Profiles of 350 Genes
Plant Biology, 6(6), 654–663.
author keywords: microarray analysis; Pinus taeda; earlywood; latewood; transcript abundance
MeSH headings : Expressed Sequence Tags; Gene Expression Profiling; Gene Expression Regulation, Plant; Genes, Plant; Microarray Analysis; Pinus taeda / genetics; Pinus taeda / metabolism; Reverse Transcriptase Polymerase Chain Reaction; Seasons; Transcription, Genetic
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018
2004 journal article
Genetics of Postzygotic Isolation in Eucalyptus: Whole-Genome Analysis of Barriers to Introgression in a Wide Interspecific Cross of Eucalyptus grandis and E. globulus
Genetics, 166(3), 1405–1418.
MeSH headings : Alleles; Bayes Theorem; Chi-Square Distribution; Chromosome Mapping; Chromosomes, Plant; Crosses, Genetic; Eucalyptus / genetics; Genetic Linkage; Genetic Markers; Genome, Plant; Hybridization, Genetic; Markov Chains; Monte Carlo Method; Pedigree; Polymorphism, Restriction Fragment Length; Species Specificity
TL;DR:
Contrary to expectation, heterospecific (donor) alleles of TRDLs were favored as often as recurrent alleles in both backcrosses, suggesting that positive and negative heterOSpecific interactions affect introgression rates in this wide interspecific pedigree.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science; OpenAlex)
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018
2004 conference paper
Microarray analysis of gene expression in OP pine families in field plantings
In B. Li & S. McKeand (Eds.), Forest Genetics and Tree Breeding in the Age of Genomics: Progress and Future, IUFRO Joint Conference of Division 2, Conference Proceedings (pp. 257–269).
Ed(s): B. Li & S. McKeand
Source: NC State University Libraries
Added: August 6, 2018
2003 journal article
An arabinogalactan protein associated with secondary cell wall formation in differentiating xylem of loblolly pine
Plant Molecular Biology, 52(1), 91–102.
author keywords: arabinogalactan proteins (AGPs); Pinus taeda; plant cell wall biosynthesis; xylem differentiation
MeSH headings : Amino Acid Sequence; Antibodies, Monoclonal / immunology; Antibody Specificity; Blotting, Western; Cell Wall / metabolism; Chromatography, High Pressure Liquid / methods; Chromosome Mapping; Escherichia coli / genetics; Haplotypes; Immunohistochemistry; Molecular Sequence Data; Mucoproteins / genetics; Mucoproteins / immunology; Mucoproteins / metabolism; Pinus / genetics; Pinus / metabolism; Pinus taeda; Plant Proteins; Plant Structures / growth & development; Plant Structures / metabolism; Recombinant Proteins / genetics; Recombinant Proteins / isolation & purification; Recombinant Proteins / metabolism; Sequence Alignment; Sequence Analysis, DNA; Sequence Homology, Amino Acid
TL;DR:
Investigation of genetic characterization, partial purification and immunolocalization of a classical AGP in loblolly pine showed that the PtaAGP6 epitopes are restricted to a file of cells that just precede secondary cell wall thickening, suggesting roles in xylem differentiation and wood formation.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(OpenAlex)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018
2003 journal article
Apparent homology of expressed genes from wood-forming tissues of loblolly pine (Pinus taeda L.) with Arabidopsis thaliana
Proceedings of the National Academy of Sciences, 100(12), 7383–7388.
MeSH headings : 3' Untranslated Regions; 5' Untranslated Regions; Arabidopsis / genetics; Conserved Sequence; Contig Mapping; DNA, Complementary / genetics; DNA, Plant / genetics; Evolution, Molecular; Expressed Sequence Tags; Gene Expression; Genes, Plant; Genome, Plant; Molecular Sequence Data; Pinus / genetics; Pinus taeda; Retroelements / genetics; Sequence Homology, Nucleic Acid; Species Specificity; Wood
UN Sustainable Development Goal Categories
15. Life on Land
(OpenAlex)
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018
2003 journal article
Aux/IAA gene family is conserved in the gymnosperm, loblolly pine (Pinus taeda)
Tree Physiology, 23(17), 1181–1192.
author keywords: adventitious roots; auxin; auxin-induced genes; early response genes; multi-gene family
MeSH headings : Amino Acid Sequence; Blotting, Northern; Blotting, Southern; Cloning, Molecular; Conserved Sequence / genetics; Gene Expression Regulation, Plant / genetics; Genes, Plant / genetics; Indoleacetic Acids / physiology; Phylogeny; Pinus taeda / genetics; Plant Proteins / genetics; Sequence Alignment; Trees / genetics
TL;DR:
Phylogenetic analysis showed that all five pine genes clustered within a single class (Class I) of the dendrogram, suggesting that it is the original lineage and that other gene classes have evolved subsequent to the angiosperm/gymnosperm divergence.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018
2003 journal article
Characterisation of PtMYB1, an R2R3-MYB from pine xylem
Plant Molecular Biology, 53(4), 597–608.
author keywords: MYB; phenylalanine ammonia-lyase; phenylpropanoid; pine; xylem
MeSH headings : Adenosine Triphosphate / genetics; Adenosine Triphosphate / metabolism; Base Sequence; Binding Sites / genetics; Cloning, Molecular; Cytidine Triphosphate / genetics; Cytidine Triphosphate / metabolism; DNA, Complementary / chemistry; DNA, Complementary / genetics; Electrophoretic Mobility Shift Assay; Molecular Sequence Data; Oligonucleotides / genetics; Oligonucleotides / metabolism; Phylogeny; Pinus / genetics; Plant Proteins / genetics; Plant Proteins / metabolism; Plant Structures / genetics; Protein Binding; Proto-Oncogene Proteins c-myb / genetics; Proto-Oncogene Proteins c-myb / metabolism; Recombinant Fusion Proteins / genetics; Recombinant Fusion Proteins / metabolism; Saccharomyces cerevisiae / genetics; Sequence Analysis, DNA; Transcription, Genetic / genetics
TL;DR:
Rec recombinant PtMYB1 protein was able to bind to AC elements and induce AC-element-dependent shifts in the electrophoretic mobility of a plant promoter that contains three AC elements, the minimal PHENYLALANINE AMMONIA-LYASE 2 (PAL2) promoter from Phaseolus vulgaris.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(OpenAlex)
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018
2003 journal article
Characterisation of a pine MYB that regulates lignification
The Plant Journal, 36(6), 743–754.
author keywords: lignin; MYB; transcription; wood; pine; phenylpropanoid
MeSH headings : Amino Acid Sequence; Arabidopsis / genetics; Arabidopsis Proteins / chemistry; Arabidopsis Proteins / genetics; Base Sequence; DNA, Complementary / genetics; DNA-Binding Proteins / chemistry; DNA-Binding Proteins / genetics; Gene Expression Regulation, Plant / genetics; Gene Library; Genes, myb / genetics; Lignin / genetics; Molecular Sequence Data; Pinus / genetics; Plant Proteins / chemistry; Plant Proteins / genetics; Plants, Genetically Modified / genetics; Plants, Genetically Modified / metabolism; RNA, Plant / genetics; RNA, Plant / isolation & purification; Sequence Alignment; Sequence Homology, Amino Acid; Sequence Homology, Nucleic Acid; Tobacco / metabolism; Transcription Factors / chemistry; Transcription Factors / genetics
TL;DR:
Electrophoretic mobility shift assays showed that recombinant PtMYB4 protein is able to bind to DNA motifs known as AC elements, consistent with the hypothesis that PtmyB4 is sufficient to induce lignification, and that it may play this role during wood formation in pine.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(OpenAlex)
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018
2002 chapter
Golden rice
In Life science ethics (pp. 307–368). Ames, IA: Iowa State University Press.
Source: NC State University Libraries
Added: August 6, 2018
2001 journal article
Functional genomics and cell wall biosynthesis in loblolly pine
Plant Molecular Biology, 47(1/2), 275–291.
author keywords: EST sequencing; microarrays; Pinus taeda; xylogenesis; wood formation
TL;DR:
Gene discovery by partial DNA sequence determination of cDNA clones is an effective means of building a knowledge base for molecular investigations of mechanisms governing aspects of pine growth and development, including the commercially relevant properties of secondary cell walls in wood.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(OpenAlex)
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018
2001 journal article
Genotypic control of high-frequency adventitious shoot regeneration via somatic organogenesis in loblolly pine
Plant Science, 161(2), 267–272.
author keywords: Pinus taedu L.; organogenesis; adventitious shoot regeneration; callus induction frequency; differentiation frequency
TL;DR:
The in vitro regeneration procedure established in this investigation could be used for clonal micropropagation of some genotypes of loblolly pine, as well as for establishing a transformation system in coniferous species.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science; OpenAlex)
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018
2001 journal article
Molecular Cloning and Expression of Eight Laccase cDNAs in Loblolly Pine (Pinus taeda)*
Journal of Plant Research, 114(2), 147–155.
author keywords: laccase; lignin synthesis; loblolly pine (Pinus taeda L); xylem differentiation
TL;DR:
Northern analysis indicated that all eight of the laccase transcripts are most abundant in differentiating xylem of the six tissues and organs tested, suggesting that laccases play an important role in pine xyleM development.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(OpenAlex)
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018
1999 journal article
Susceptibility of Paulownia elongata to Agrobacterium and production of transgenic calli and hairy roots by in vitro inoculation
Plant Cell, Tissue and Organ Culture, 55(1), 45–51.
TL;DR:
Susceptibility of Paulownia elongata S.Y. Hu (princess tree) to Agrobacterium tumefaciens and A. rhizogenes was demonstrated by inoculating in vitro shoots and the presence of tDNA in long-term callus and root cultures was demonstrated.
(via Semantic Scholar)
Sources: NC State University Libraries, NC State University Libraries
Added: August 6, 2018
1998 journal article
In vitro rooting and early greenhouse growth of micropropagated Paulownia elongata shoots
NEW FORESTS, 15(2), 127–138.
author keywords: auxin; princess tree; tissue culture
TL;DR:
Experiments focused on improving methods for rooting micropropagated Paulownia elongata shoots and enhancing the quality of plants grown from rooted shoots transferred to the greenhouse found shoots with a greater initial height had greater rooting success than short shoots.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
1997 chapter
Auxin-induced gene expression during rooting of loblolly pine stem cuttings
In A. Altman & Y. Waisel (Eds.), Biology of Root Formation and Development (pp. 163–167).
Ed(s): . A. Altman & Y. Waisel
TL;DR:
In many tree species, especially conifers, operational use of rooted stem cuttings is limited by maturation, so the time required to field test individual trees precludes propagation of those trees, because rooting ability declines with age of the donor plant.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(OpenAlex)
Source: NC State University Libraries
Added: August 6, 2018
1996 conference paper
Molecular markers, forest genetics, and tree breeding
In J. P. Gustafson & R. B. Flavell (Eds.), Genomes of Plants and Animals: 21 Stadler Genetics Symposium (pp. 87–102).
Ed(s): J. Gustafson & R. Flavell
TL;DR:
It is argued that important traits in forest trees such as wood volume, are likely to be controlled by large numbers of genes with small effects, and therefore, are unlikely to have useful marker trait associations.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(OpenAlex)
Sources: NC State University Libraries, NC State University Libraries
Added: August 6, 2018
1993 conference paper
Application of genetic markers to tree breeding
Proceedings of the 22nd Southern Forest Tree Improvement Conference, 452–463.
Source: NC State University Libraries
Added: August 6, 2018
1992 conference paper
Mapping in woody plants with RAPD markers: application to breeding in forestry and horticulture
Proceedings of the Symposium on the Applications of RAPD Technology to Plant Breeding, 37–40. Joint Plant Breeding Symposium Series, Crop Science Society of America, American Society for Horticultural Science, and American Genetics Association.
Source: NC State University Libraries
Added: August 6, 2018
1991 journal article
Genetic engineering of wood
Forest Ecology and Management, 43(3-4), 301–316.
TL;DR:
Widespread application of genetic engineering awaits better methods of gene transfer and a fundamental understanding of the development process of wood formation to help to meet the projected demand for wood and paper products in the next century.
(via Semantic Scholar)
Sources: Web Of Science, Crossref, NC State University Libraries
Added: August 6, 2018
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