Richard Lyman

Johnstun, J. A., Shankar, V., Mokashi, S. S., Sunkara, L. T., Ihearahu, U. E., Lyman, R. L., … Anholt, R. R. H. (2021). Functional Diversification, Redundancy, and Epistasis among Paralogs of the Drosophila melanogaster Obp50a-d Gene Cluster. MOLECULAR BIOLOGY AND EVOLUTION, 38(5), 2030–2044. https://doi.org/10.1093/molbev/msab004

Everett, L. J., Huang, W., Zhou, S., Carbone, M. A., Lyman, R. F., Arya, G. H., … Mackay, T. F. C. (2020). Gene expression networks in the Drosophila Genetic Reference Panel. GENOME RESEARCH, 30(3), 485–496. https://doi.org/10.1101/gr.257592.119

Huang, W., Carbone, M. A., Lyman, R. F., Anholt, R. R. H., & Mackay, T. F. C. (2020). Genotype by environment interaction for gene expression in Drosophila melanogaster. NATURE COMMUNICATIONS, 11(1). https://doi.org/10.1038/s41467-020-19131-y

Huang, W., Massouras, A., Inoue, Y., Peiffer, J., Ramia, M., Tarone, A. M., … Highnam, G. (2014). Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines. Genome Research, 24(7), 1193–1208.

Harbison, S. T., Carbone, M. A., Ayroles, J. F., Stone, E. A., Lyman, R. F., & Mackay, T. F. C. (2009). Co-regulated transcriptional networks contribute to natural genetic variation in Drosophila sleep. NATURE GENETICS, 41(3), 371–375. https://doi.org/10.1038/ng.330

Ayroles, J. F., Carbone, M. A., Stone, E. A., Jordan, K. W., Lyman, R. F., Magwire, M. M., … Mackay, T. F. C. (2009). Systems genetics of complex traits in Drosophila melanogaster. NATURE GENETICS, 41(3), 299–307. https://doi.org/10.1038/ng.332

Wang, P., Lyman, R. F., Shabalina, S. A., Mackay, T. F. C., & Anholt, R. R. H. (2007). Association of polymorphisms in odorant-binding protein genes with variation in olfactory response to benzaldehyde in Drosophila. GENETICS, 177(3), 1655–1665. https://doi.org/10.1534/genetics.107.079731

Lai, C.-Q., Parnell, L. D., Lyman, R. F., Ordovas, J. A., & Mackay, T. F. C. (2007). Candidate genes affecting Drosophila life span identified by integrating microarray gene expression analysis and QTL mapping. MECHANISMS OF AGEING AND DEVELOPMENT, 128(3), 237–249. https://doi.org/10.1016/j.mad.2006.12.003

Carbone, M. A., Jordan, K. W., Lyman, R. F., Harbison, S. T., Leips, J., Morgan, T. J., … Mackay, T. F. C. (2006). Phenotypic variation and natural selection at Catsup, a pleiotropic quantitative trait gene in Drosphila. CURRENT BIOLOGY, 16(9), 912–919. https://doi.org/10.1016/j.cub.2006.03.051

Rivas, A. L., Tadevosyan, R., Gorewit, R. C., Anderson, K. L., Lyman, R., & Gonzalez, R. N. (2006). Relationships between the phagocytic ability of milk macrophages and polymorphonuclear cells and somatic cell counts in uninfected cows. Canadian Journal of Veterinary Research, 70(1), 68–74.

Mackay, T. F. C., & Lyman, R. F. (2005). Drosophila bristles and the nature of quantitative genetic variation. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, 360(1459), 1513–1527.

Mackay, T. F. C., Heinsohn, S. L., Lyman, R. F., Moehring, A. J., Morgan, T. J., & Rollmann, S. M. (2005, May 3). Genetics and genomics of Drosophila mating behavior. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, Vol. 102, pp. 6622–6629. https://doi.org/10.1073/pnas.0501986102

Mackay, T. F. C., Lyman, R. F., & Lawrence, F. (2005). Polygenic mutation in Drosophila melanogaster: Mapping spontaneous mutations affecting sensory bristle number. GENETICS, 170(4), 1723–1735. https://doi.org/10.1534/genetics.104.032581

De Luca, M., Roshina, N. V., Geiger-Thornsberry, G. L., Lyman, R. F., Pasyukova, E. G., & Mackay, T. F. C. (2003). Dopa decarboxylase (Ddc) affects variation in Drosophila longevity. NATURE GENETICS, 34(4), 429–433. https://doi.org/10.1038/ng1218

Norga, K. K., Gurganus, M. C., Dilda, C. L., Yamamoto, A., Lyman, R. F., Patel, P. H., … Bellen, H. J. (2003). Quantitative analysis of bristle number in Drosophila mutants identifies genes involved in neural development. CURRENT BIOLOGY, 13(16), 1388–1397. https://doi.org/10.1016/S0960-9822(03)00546-3

Borras, T., Morozova, T. V., Heinsohn, S. L., Lyman, R. F., Mackay, T. F. C., & Anholt, R. R. H. (2003). Transcription profiling in Drosophila eyes that overexpress the human glaucoma-associated trabecular meshwork-inducible glucocorticoid response protein/myocilin (TIGR/MYOC). Genetics, 163(2), 637–645.

Luo, A. H., Cannon, E. H., Wekesa, K. S., Lyman, R. F., Vandenbergh, J. G., & Anholt, R. R. H. (2002). Impaired olfactory behavior in mice deficient in the a subunit of G(0). BRAIN RESEARCH, 941(1-2), 62–71. https://doi.org/10.1016/S0006-8993(02)02566-0

Robin, C., Lyman, R. F., Long, A. D., Langley, C. H., & Mackay, T. F. C. (2002). The hairy: A quantitative trait locus for Drosophila sensory bristle number. Genetics, 162(1), 155–164.

Lyman, R. F., Nevo, E., & Mackay, T. F. C. (2002). Variation in Drosophila sensory bristle number at 'Evolution Canyon'. GENETICS RESEARCH, 80(3), 215–223. https://doi.org/10.1017/S0016672302005876

Long, A. D., Lyman, R. F., Morgan, A. H., Langley, C. H., & Mackay, T. F. C. (2000). Both naturally occurring insertions of transposable elements and intermediate frequency polymorphisms at the achaete-scute complex are associated with variation in bristle number in Drosophila melanogaster. Genetics, 154(3), 1255–1269.

Vieira, C., Pasyukova, E. G., Zeng, Z. B., Hackett, J. B., Lyman, R. F., & Mackay, T. F. C. (2000). Genotype-environment interaction for quantitative trait loci affecting life span in Drosophila melanogaster. Genetics, 154(1), 213–227.

Lyman, R. F., Lai, C. Q., & Mackay, T. F. C. (1999). Linkage disequilibrium mapping of molecular polymorphisms at the scabrous locus associated with naturally occurring variation in bristle number in Drosophila melanogaster. GENETICS RESEARCH, 74(3), 303–311. https://doi.org/10.1017/S001667239900419X

Lyman, R. F., & Mackay, T. F. C. (1998). Candidate quantitative trait loci and naturally occurring phenotypic variation for bristle number in Drosophila melanogaster: The Delta-Hairless gene region. Genetics, 149(2), 983–998.

Gurganus, M. C., Fry, J. D., Nuzhdin, S. V., Pasyukova, E. G., Lyman, R. F., & MacKay, T. F. C. (1998). Genotype-environment interaction at quantitative trait loci affecting sensory bristle number in Drosophila melanogaster. Genetics, 149(4), 1883–1898.

Long, A. D., Lyman, R. F., Langley, C. H., & Mackay, T. F. C. (1998). Two sites in the Delta gene region contribute to naturally occurring variation in bristle number in Drosophila melanogaster. Genetics, 149(2), 999–1017.

Edwards, A. C., Ayroles, J. F., Stone, E. A., Carbone, M. A., Lyman, R. F., & Mackay, T. F. C. A transcriptional network associated with natural variation in Drosophila aggressive behavior. Genome Biology, 10(7).

Dembeck, L. M., Huang, W., Magwire, M. M., Lawrence, F., Lyman, R. F., & Mackay, T. F. C. Genetic architecture of abdominal pigmentation in Drosophila melanogaster. PLoS Genetics, 11(5).

Huang, W., Carbone, M. A., Magwire, M. M., Peiffer, J. A., Lyman, R. F., Stone, E. A., … Mackay, T. F. C. Genetic basis of transcriptome diversity in Drosophila melanogaster. Proceedings of the National Academy of Sciences of the United States of America, 112(44), E6010–6019.

Clowers, K. J., Lyman, R. F., Mackay, T. F. C., & Morgan, T. J. Genetic variation in senescence marker protein-30 is associated with natural variation in cold tolerance in Drosophila. Genetical Research, 92(2), 103–113.

Wilson, R. H., Lai, C. Q., Lyman, R. F., & Mackay, T. F. C. Genomic response to selection for postponed senescence in Drosophila. Mechanisms of Ageing and Development, 134(3-4), 79–88.

Wang, P., Lyman, R. F., Mackay, T. F. C., & Anholt, R. R. H. Natural variation in odorant recognition among odorant-binding proteins in Drosophila melanogaster. Genetics, 184(3), 759–767.

Mackay, T. F. C., & Lyman, R. F. Polygenic mutation in Drosophila melanogaster: Genotype x environment interaction for spontaneous mutations affecting bristle number. Genetica, 102-103(1-6), 199–215.

Huang, W., Lyman, R. F., Lyman, R. A., Carbone, M. A., Harbison, S. T., Magwire, M. M., & Mackay, T. F. C. Spontaneous mutations and the origin and maintenance of quantitative genetic variation. Elife, 5.

Mackay, T. F. C., Richards, S., Stone, E. A., Barbadilla, A., Ayroles, J. F., Zhu, D. H., … Carbone, M. A. The Drosophila melanogaster genetic reference panel. Nature, 482(7384), 173–178.