@article{milton_draughn_bobay_stowe_olson_feldmann_thompson_myers_santoro_kearns_et al._2020, title={The Solution Structures and Interaction of SinR and Sinl: Elucidating the Mechanism of Action of the Master Regulator Switch for Biofilm Formation in Bacillus subtilis}, volume={432}, ISBN={1089-8638}, DOI={10.1016/j.jmb.2019.08.019}, number={2}, journal={JOURNAL OF MOLECULAR BIOLOGY}, author={Milton, Morgan E. and Draughn, G. Logan and Bobay, Benjamin G. and Stowe, Sean D. and Olson, Andrew L. and Feldmann, Erik A. and Thompson, Richele J. and Myers, Katherine H. and Santoro, Michael T. and Kearns, Daniel B. and et al.}, year={2020}, pages={343–357} } @article{draughn_milton_feldmann_bobay_roth_olson_thompson_actis_davies_cavanagh_2018, title={The structure of the biofilm-controlling response regulator BfmR from Acinetobacter baumannii reveals details of Its DNA-binding mechanism}, volume={430}, DOI={10.1016/j.jmb.2018.02.002}, number={6}, journal={Journal of Molecular Biology}, author={Draughn, G. L. and Milton, M. E. and Feldmann, E. A. and Bobay, B. G. and Roth, B. M. and Olson, A. L. and Thompson, R. J. and Actis, L. A. and Davies, C. and Cavanagh, J.}, year={2018}, pages={806–821} } @article{stowe_thompson_peng_su_blackledge_draughn_coe_johannes_lapham_mackenzie_et al._2015, title={Membrane-permeabilizing activity of reverse-amide 2-aminoimidazole antibiofilm agents against Acinetobacter baumannii}, volume={12}, DOI={10.2174/1567201811666140924125740}, number={2}, journal={Current Drug Delivery}, author={Stowe, S. D. and Thompson, R. J. and Peng, L. L. and Su, Z. M. and Blackledge, M. S. and Draughn, G. L. and Coe, W. H. and Johannes, E. and Lapham, V. K. and Mackenzie, J. and et al.}, year={2015}, pages={223–230} } @article{tucker_bobay_banse_olson_soderblom_moseley_thompson_varney_losick_cavanagh_2014, title={A DNA Mimic: The Structure and Mechanism of Action for the Anti-Repressor Protein AbbA}, volume={426}, DOI={10.1016/j.jmb.2014.02.010}, number={9}, journal={Journal of Molecular Biology}, author={Tucker, A. T. and Bobay, B. G. and Banse, A. V. and Olson, A. L. and Soderblom, E. J. and Moseley, M. A. and Thompson, R. J. and Varney, K. M. and Losick, R. and Cavanagh, J.}, year={2014}, pages={1911–1924} } @article{olson_thompson_melander_cavanagh_2014, title={Chemical shift assignments and secondary structure prediction of the C-terminal domain of the response regulator BfmR from Acinetobacter baumannii}, volume={8}, DOI={10.1007/s12104-012-9454-2}, number={1}, journal={Biomolecular NMR Assignments}, author={Olson, A. L. and Thompson, R. J. and Melander, C. and Cavanagh, J.}, year={2014}, pages={67–70} } @article{bobay_thompson_milton_cavanagh_2014, title={Chemical shift assignments and secondary structure prediction of the phosphorelay protein VanU from Vibrio anguillarum}, volume={8}, DOI={10.1007/s12104-013-9478-2}, number={1}, journal={Biomolecular NMR Assignments}, author={Bobay, B. G. and Thompson, R. J. and Milton, D. L. and Cavanagh, J.}, year={2014}, pages={177–179} } @article{brackett_melander_an_krishnamurthy_thompson_cavanagh_melander_2014, title={Small-molecule suppression of beta-lactam resistance in multidrug-resistant gram-negative pathogens}, volume={57}, DOI={10.1021/jm501050e}, number={17}, journal={Journal of Medicinal Chemistry}, author={Brackett, C. M. and Melander, R. J. and An, I. H. and Krishnamurthy, A. and Thompson, R. J. and Cavanagh, J. and Melander, C.}, year={2014}, pages={7450–7458} } @article{olson_tucker_bobay_soderblom_moseley_thompson_cavanagh_2014, title={Structure and DNA-binding traits of the transition state regulator AbrB}, volume={22}, DOI={10.1016/j.str.2014.08.018}, number={11}, journal={Structure (Cambridge, Mass. : 2001)}, author={Olson, A. L. and Tucker, A. T. and Bobay, B. G. and Soderblom, E. J. and Moseley, M. A. and Thompson, R. J. and Cavanagh, J.}, year={2014}, pages={1650–1656} } @article{stowe_tucker_thompson_piper_richards_rogers_mathies_melander_cavanagh_2012, title={Evaluation of the toxicity of 2-aminoimidazole antibiofilm agents using both cellular and model organism systems}, volume={35}, DOI={10.3109/01480545.2011.614620}, number={3}, journal={Drug and Chemical Toxicology}, author={Stowe, S. D. and Tucker, A. T. and Thompson, R. and Piper, A. and Richards, J. J. and Rogers, S. A. and Mathies, L. D. and Melander, C. and Cavanagh, J.}, year={2012}, pages={310–315} } @article{thompson_bobay_stowe_olson_peng_su_actis_melander_cavanagh_2012, title={Identification of BfmR, a response regulator involved in biofilm development, as a target for a 2-aminoimidazole-based antibiofilm agent}, volume={51}, DOI={10.1021/bi3015289}, number={49}, journal={Biochemistry}, author={Thompson, R. J. and Bobay, B. G. and Stowe, S. D. and Olson, A. L. and Peng, L. L. and Su, Z. M. and Actis, L. A. and Melander, C. and Cavanagh, J.}, year={2012}, pages={9776–9778} } @article{bobay_stewart_tucker_thompson_varney_cavanagh_2012, title={Structural insights into the calcium-dependent interaction between calbindin-D28K and caspase-3}, volume={586}, DOI={10.1016/j.febslet.2012.08.032}, number={20}, journal={FEBS Letters}, author={Bobay, B. G. and Stewart, A. L. and Tucker, A. T. and Thompson, R. J. and Varney, K. M. and Cavanagh, J.}, year={2012}, pages={3582–3589} } @misc{stowe_richards_tucker_thompson_melander_cavanagh_2011, title={Anti-biofilm compounds derived from marine sponges}, volume={9}, number={10}, journal={Marine Drugs}, author={Stowe, S. D. and Richards, J. J. and Tucker, A. T. and Thompson, R. and Melander, C. and Cavanagh, J.}, year={2011}, pages={2010–2035} } @article{bobay_thompson_hoch_cavanagh_2010, title={Long range dynamic effects of point-mutations trap a response regulator in an active conformation}, volume={584}, DOI={10.1016/j.febslet.2010.08.051}, number={19}, journal={FEBS Letters}, author={Bobay, B. G. and Thompson, R. J. and Hoch, J. A. and Cavanagh, J.}, year={2010}, pages={4203–4207} } @article{hobbs_bobay_thompson_perego_cavanagh_2010, title={NMR solution structure and DNA-binding model of the DNA-binding domain of competence protein A}, volume={398}, DOI={10.1016/j.jmb.2010.03.003}, number={2}, journal={Journal of Molecular Biology}, author={Hobbs, C. A. and Bobay, B. G. and Thompson, R. J. and Perego, M. and Cavanagh, J.}, year={2010}, pages={248–263} } @article{kojetin_mclaughlin_thompson_dubnau_prepiak_rance_cavanagh_2009, title={Structural and motional contributions of the Bacillus subtilis ClpC N-domain to adaptor protein interactions}, volume={387}, DOI={10.1016/j.jmb.2009.01.046}, number={3}, journal={Journal of Molecular Biology}, author={Kojetin, D. J. and McLaughlin, P. D. and Thompson, R. J. and Dubnau, D. and Prepiak, P. and Rance, M. and Cavanagh, J.}, year={2009}, pages={639–652} } @article{hobbs_deterding_perera_bobay_thompson_darden_cavanagh_tomer_2009, title={Structural characterization of the conformational change in calbindin-d-28k upon calcium binding using differential surface modification analyzed by mass spectrometry}, volume={48}, DOI={10.1021/bi900350q}, number={36}, journal={Biochemistry}, author={Hobbs, C. A. and Deterding, L. J. and Perera, L. and Bobay, B. G. and Thompson, R. J. and Darden, T. A. and Cavanagh, J. and Tomer, K. B.}, year={2009}, pages={8603–8614} } @article{sullivan_bobay_kojetin_thompson_rance_strauch_cavanagh_2008, title={Insights into the nature of DNA binding of AbrB-like transcription factors}, volume={16}, DOI={10.1016/j.str.2008.08.014}, number={11}, journal={Structure (Cambridge, Mass. : 2001)}, author={Sullivan, D. M. and Bobay, B. G. and Kojetin, D. J. and Thompson, R. J. and Rance, M. and Strauch, M. A. and Cavanagh, J.}, year={2008}, pages={1702–1713} } @article{kojetin_mclaughlin_thompson_venters_rance_cavanagh_2007, title={NMR assignment of the N-terminal repeat domain of Bacillus subtilis ClpC}, volume={1}, DOI={10.1007/s12104-007-9046-8}, number={2}, journal={Biomolecular NMR Assignments}, author={Kojetin, D. J. and McLaughlin, P. D. and Thompson, R. J. and Venters, R. A. and Rance, M. and Cavanagh, J.}, year={2007}, pages={163–165} } @article{kordys_bobay_thompson_venters_cavanagh_2007, title={Peptide binding proclivities of calcium loaded calbindin-D28k}, volume={581}, DOI={10.1016/j.febslet.2007.09.004}, number={24}, journal={FEBS Letters}, author={Kordys, D. R. and Bobay, B. G. and Thompson, R. J. and Venters, R. A. and Cavanagh, J.}, year={2007}, pages={4778–4782} } @article{mclaughlin_bobay_regel_thompson_hoch_cavanagh_2007, title={Predominantly buried residues in the response regulator Spo0F influence specific sensor kinase recognition}, volume={581}, DOI={10.1016/j.febslet.2007.02.061}, number={7}, journal={FEBS Letters}, author={McLaughlin, P. D. and Bobay, B. G. and Regel, E. J. and Thompson, R. J. and Hoch, J. A. and Cavanagh, J.}, year={2007}, pages={1425–1429} } @article{bobay_mueller_thompson_murzin_venters_strauch_cavanagh_2006, title={NMR structure of AbhN and comparison with AbrBN - First insights into the DNA binding promiscuity and specificity of AbrB-like transition state regulator proteins}, volume={281}, DOI={10.1074/jbc.M601963200}, number={30}, journal={Journal of Biological Chemistry}, author={Bobay, B. G. and Mueller, G. A. and Thompson, R. J. and Murzin, A. G. and Venters, R. A. and Strauch, M. A. and Cavanagh, J.}, year={2006}, pages={21399–21409} } @article{kojetin_venters_kordys_thompson_kumar_cavanagh_2006, title={Structure, binding interface and hydrophobic transitions of Ca2+-loaded calbindin-D-28K}, volume={13}, DOI={10.1038/nsmb1112d}, number={7}, journal={Nature Structural & Molecular Biology}, author={Kojetin, D. J. and Venters, R. A. and Kordys, D. R. and Thompson, R. J. and Kumar, R. and Cavanagh, J.}, year={2006}, pages={641–647} } @article{kojetin_thompson_benson_naylor_waterman_davies_opperman_stephenson_hoch_cavanagh_2005, title={Structural analysis of divalent metals binding to the Bacillus subtilis response regulator Spo0F: the possibility for In vitro metalloregulation in the initiation of sporulation}, volume={18}, DOI={10.1007/s10534-005-4303-8}, number={5}, journal={Biometals}, author={Kojetin, D. J. and Thompson, R. J. and Benson, L. M. and Naylor, S. and Waterman, J. and Davies, K. G. and Opperman, C. H. and Stephenson, K. and Hoch, J. A. and Cavanagh, J.}, year={2005}, pages={449–466} } @article{bobay_benson_naylor_feeney_clark_goshe_strauch_thompson_cavanagh_2004, title={Evaluation of the DNA binding tendencies of the transition state regulator AbrB}, volume={43}, DOI={10.1021/bi048399h}, number={51}, journal={Biochemistry}, author={Bobay, B. G. and Benson, L. and Naylor, S. and Feeney, B. and Clark, A. C. and Goshe, M. B. and Strauch, M. A. and Thompson, R. and Cavanagh, J.}, year={2004}, pages={16106–16118} } @article{ulrich_thompson_bassler_cavanagh_loria_2004, title={H-1, N-15, and C-13 chemical shift assignments of the Vibrio harveyi histidine phosphotransferase protein LuxU}, volume={29}, DOI={10.1023/B:JNMR.0000034349.22942.e1}, number={4}, journal={Journal of Biomolecular NMR}, author={Ulrich, D. L. and Thompson, R. and Bassler, B. and Cavanagh, J. and Loria, J. P.}, year={2004}, pages={551–552} } @article{kojetin_thompson_cavanagh_2004, title={Sub-classification of response regulators using the surface characteristics of their receiver domains (FEBS 27785) (vol 554, pg 231, 2003)}, volume={560}, DOI={10.1016/s0014-5793(04)00063-8}, number={03-Jan}, journal={FEBS Letters}, author={Kojetin, D. J. and Thompson, R. J. and Cavanagh, J.}, year={2004}, pages={227–228} } @article{cavanagh_benson_thompson_naylor_2003, title={In-line desalting mass spectrometry for the study of noncovalent biological complexes}, volume={75}, DOI={10.1021/ac030182q}, number={14}, journal={Analytical Chemistry}, author={Cavanagh, J. and Benson, L. M. and Thompson, R. and Naylor, S.}, year={2003}, pages={3281–3286} } @article{kojetin_thompson_cavanagh_2003, title={Sub-classification of response regulators using the surface characteristics of their receiver domains}, volume={554}, DOI={10.1016/S0014-5793(03)01167-0}, number={3}, journal={FEBS Letters}, author={Kojetin, D. J. and Thompson, R. J. and Cavanagh, J.}, year={2003}, pages={231–236} } @article{venters_benson_craig_paul_kordys_thompson_naylor_kumar_cavanagh_bagu_2003, title={The effects of Ca2+ binding on the conformation of calbindin D- 28K: A nuclear magnetic resonance and microelectrospray mass spectrometry study}, volume={317}, DOI={10.1016/S0003-2697(03)00084-8}, number={1}, journal={Analytical Biochemistry}, author={Venters, R. A. and Benson, L. M. and Craig, T. A. and Paul, K. H. and Kordys, D. R. and Thompson, R. and Naylor, S. and Kumar, R. and Cavanagh, J. and Bagu, J.}, year={2003}, pages={59–66} } @article{venters_thompson_cavanagh_2002, title={Current approaches for the study of large proteins by NMR}, volume={602}, DOI={10.1016/s0022-2860(01)00690-1}, number={2002 Jan 9}, journal={Journal of Molecular Structure [including Theochem]}, author={Venters, R. A. and Thompson, R. and Cavanagh, J.}, year={2002}, pages={275–292} } @article{benson_vaughn_strauch_bobay_thompson_naylor_cavanagh_2002, title={Macromolecular assembly of the transition state regulator AbrB in its unbound and complexed states probed by microelectrospray ionization mass spectrometry}, volume={306}, DOI={10.1006/abio.2002.5704}, number={2}, journal={Analytical Biochemistry}, author={Benson, L. M. and Vaughn, J. L. and Strauch, M. A. and Bobay, B. G. and Thompson, R. and Naylor, S. and Cavanagh, J.}, year={2002}, pages={222–227} } @article{cavanagh_thompson_bobay_benson_naylor_2002, title={Stoichiometries of protein - Protein/DNA binding and conformational changes for the transition-state regulator AbrB measured by pseudo cell-size exclusion chromatography-mass spectrometry}, volume={41}, DOI={10.1021/bi0202225}, number={25}, journal={Biochemistry}, author={Cavanagh, J. and Thompson, R. and Bobay, B. and Benson, L. M. and Naylor, S.}, year={2002}, pages={7859–7865} } @article{sehgal_tompson_cavanagh_kelly_2002, title={Structural and catalytic response to temperature and cosolvents of carboxylesterase EST1 from the extremely thermoacidophilic archaeon Sulfolobus solfataricus P1}, volume={80}, DOI={10.1002/bit.10433}, number={7}, journal={Biotechnology and Bioengineering}, author={Sehgal, A. C. and Tompson, R. and Cavanagh, J. and Kelly, R. M.}, year={2002}, pages={784–793} }