Works (333)

Updated: October 23rd, 2023 08:15

2023 article

Complete Genome Sequences of Caldicellulosiruptor acetigenus DSM 7040, Caldicellulosiruptor morganii DSM 8990 (RT8.B8), and Caldicellulosiruptor naganoensis DSM 8991 (NA10)

Bing, R. G. G., Willard, D. J. J., Manesh, M. J. H., Laemthong, T., Crosby, J. R. R., Adams, M. W. W., & Kelly, R. M. M. (2023, February 1). MICROBIOLOGY RESOURCE ANNOUNCEMENTS, Vol. 2.

By: R. Bing n, D. Willard n, M. Manesh n, T. Laemthong n, J. Crosby n, M. Adamsโ€‰*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Web Of Science, ORCID
Added: February 20, 2023

2023 journal article

Complete Genome Sequences of Two Thermophilic Indigenous Bacteria Isolated from Wheat Straw, Thermoclostridium stercorarium subsp. Strain RKWS1 and Thermoanaerobacter sp. Strain RKWS2

MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 12(3).

By: R. Bing n, D. Willard n, M. Manesh n, T. Laemthong n, J. Crosby n, M. Adamsโ€‰*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Web Of Science, ORCID
Added: April 17, 2023

2023 journal article

Fermentative conversion of unpretreated plant biomass: A thermophilic threshold for indigenous microbial growth

BIORESOURCE TECHNOLOGY, 367.

By: R. Bing n, M. Carey n, T. Laemthong n, D. Willard n, J. Crosby n, D. Sulisโ€‰ n, J. Wang nโ€‰, M. Adamsโ€‰*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Thermophiles; Lignocellulose; Consolidated bioprocessing; Caldicellulosiruptor bescii; Acetivibrio thermocellus
MeSH headings : Biomass; Fermentation; Lignin / chemistry; Clostridium thermocellum / metabolism; Plants / metabolism
Sources: Web Of Science, ORCID
Added: January 17, 2023

2023 article

Innovating Life Sciences Laboratory Training: Molecular Biology Laboratory Education Modules (MBLEMs) as a Model for Advanced Training at Diverse Institutions

JOURNAL OF BIOLOGICAL CHEMISTRY, Vol. 299, pp. S260โ€“S260.

By: M. Srougi*โ€‰, A. Corbett, C. Garcia, M. Sabaoun, M. Santisteban, V. Sivaraman, S. Chen*โ€‰, C. Goller*โ€‰, R. Kelly*โ€‰

Sources: Web Of Science, ORCID
Added: September 11, 2023

2023 article

Interplay between transcriptional regulators and VapBC toxin-antitoxin loci during thermal stress response in extremely thermoacidophilic archaea

Cooper, C. R., Lewis, A. M., Notey, J. S., Mukherjee, A., Willard, D. J., Blum, P. H., & Kelly, R. M. (2023, February 24). ENVIRONMENTAL MICROBIOLOGY, Vol. 2.

By: C. Cooperโ€‰ n, A. Lewis n, J. Notey n, A. Mukherjee n, D. Willard n, P. Blum*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Antitoxins / genetics; Toxins, Biological / genetics; Toxins, Biological / metabolism; Heat-Shock Response / genetics; Sulfolobus solfataricus / genetics; Sulfolobus solfataricus / metabolism; Escherichia coli / genetics
Sources: Web Of Science, ORCID
Added: March 13, 2023

2023 article

Manipulating Fermentation Pathways in the Hyperthermophilic Archaeon Pyrococcus furiosus for Ethanol Production up to 95 degrees C Driven by Carbon Monoxide Oxidation

Lipscomb, G. L., Crowley, A. T., Nguyen, D. M. N., Keller, M. W., Hailey C. O'Quinn, Tanwee, T. N. N., โ€ฆ Adams, M. W. W. (2023, May 10). APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Vol. 5.

By: G. Lipscomb*, A. Crowley*, D. Nguyenโ€‰*, M. Kellerโ€‰*, . Hailey C. O'Quinn*, T. Tanwee*, J. Vailionis*, K. Zhangโ€‰* ...

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Pyrococcus furiosus; archaea; thermophile; ethanol; genetic engineering; CO dehydrogenase; bioethanol; carbon monoxide; hyperthermophiles; metabolic engineering; metabolic modeling
Sources: Web Of Science, ORCID
Added: May 22, 2023

2023 journal article

Multiplex CRISPR editing of wood for sustainable fiber production

SCIENCE, 381(6654), 216-+.

By: D. Sulisโ€‰ n, X. Jiangโ€‰ n, C. Yang n, B. Marquesโ€‰ n, M. Matthews n, Z. Miller n, K. Lan nโ€‰, C. Cofre-Vegaโ€‰ n ...

co-author countries: China ๐Ÿ‡จ๐Ÿ‡ณ United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Web Of Science, ORCID
Added: August 9, 2023

2023 article

Optimizing Strategies for Bio-Based Ethanol Production Using Genome-Scale Metabolic Modeling of the Hyperthermophilic Archaeon, Pyrococcus furiosus

Vailionis, J. L., Zhao, W., Zhang, K., Rodionov, D. A., Lipscomb, G. L., Tanwee, T. N. N., โ€ฆ Zhang, Y. (2023, June 8). APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Vol. 6.

By: J. Vailionis*, W. Zhaoโ€‰*, K. Zhangโ€‰*, D. Rodionovโ€‰*, G. Lipscomb*, T. Tanwee*, . Hailey C. O'Quinn*, R. Bing n ...

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Pyrococcus furiosus; thermophiles; ethanol; genome-scale modeling; CO dehydrogenase; Archaea
Sources: Web Of Science, ORCID
Added: June 19, 2023

2023 journal article

Role of cell-substrate association during plant biomass solubilization by the extreme thermophile Caldicellulosiruptor bescii

EXTREMOPHILES, 27(1).

By: T. Laemthong n, R. Bing n, J. Crosby n, M. Manesh n, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: Thailand ๐Ÿ‡น๐Ÿ‡ญ United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Caldicellulosiruptor; Extreme thermophile; Lignocellulose; Binding proteins; Tapirins
MeSH headings : Cellulose / metabolism; Biomass; Saccharum / metabolism; Caldicellulosiruptor / metabolism; Clostridiales / metabolism; Plants; Archaea / metabolism
Sources: Web Of Science, ORCID
Added: March 13, 2023

2023 article

Stay or Go: Sulfolobales Biofilm Dispersal Is Dependent on a Bifunctional VapB Antitoxin

Lewis, A. M., Willard, D. J., Manesh, M. J. H. J., Sivabalasarma, S., Albers, S.-V., & Kelly, R. M. (2023, April 10). MBIO, Vol. 4.

By: A. Lewis n, D. Willard n, M. Manesh n, S. Sivabalasarmaโ€‰*, S. Albersโ€‰* & R. Kelly nโ€‰

co-author countries: Germany ๐Ÿ‡ฉ๐Ÿ‡ช United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: toxin-antitoxin loci; biofilms; Sulfolobales; thermoacidophiles; Sulfolobus acidocaldarius
MeSH headings : Antitoxins / metabolism; Bacterial Proteins / metabolism; Bacterial Toxins / metabolism; Sulfolobales; Biofilms
Sources: Web Of Science, ORCID
Added: May 9, 2023

2023 journal article

Whither the genus Caldicellulosiruptor and the order Thermoanaerobacterales: phylogeny, taxonomy, ecology, and phenotype

FRONTIERS IN MICROBIOLOGY, 14.

By: R. Bing n, D. Willard n, J. Crosby n, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Caldicellulosiruptor; Thermoanaerobacterales; bacteria; thermophiles; phylogeny; ecology; fermentative anaerobes
Sources: Web Of Science, ORCID
Added: August 28, 2023

2022 journal article

Plant biomass fermentation by the extreme thermophile Caldicellulosiruptor bescii for co-production of green hydrogen and acetone: Technoeconomic analysis

BIORESOURCE TECHNOLOGY, 348.

By: R. Bing n, C. Straub n, D. Sulisโ€‰ n, J. Wang nโ€‰, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Acetone; Green hydrogen; Caldicellulosiruptor bescii; Extreme thermophiles; Technoeconomic analysis
MeSH headings : Acetone; Biomass; Caldicellulosiruptor; Fermentation; Hydrogen; Lignin / chemistry
Sources: Web Of Science, ORCID
Added: April 25, 2022

2022 article

Biochemical and Regulatory Analyses of Xylanolytic Regulons in Caldicellulosiruptor bescii Reveal Genus-Wide Features of Hemicellulose Utilization

Crosby, J. R., Laemthong, T., Bing, R. G., Zhang, K., Tanwee, T. N. N., Lipscomb, G. L., โ€ฆ Kelly, R. M. (2022, October 11). APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Vol. 10.

By: J. Crosby n, T. Laemthong n, R. Bing n, K. Zhangโ€‰*, T. Tanwee*, G. Lipscomb*, D. Rodionovโ€‰*, Y. Zhangโ€‰*, M. Adamsโ€‰*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Caldicellulosiruptor; extreme thermophile; hemicellulose; xylanases; hemicellulase
MeSH headings : Regulon; Xylans; Cellulose / metabolism; Clostridiales / metabolism; Sugars
Sources: Web Of Science, ORCID
Added: October 24, 2022

2022 article

Engineering Caldicellulosiruptor bescii with Surface Layer Homology Domain-Linked Glycoside Hydrolases Improves Plant Biomass Solubilization

Laemthong, T., Bing, R. G., Crosby, J. R., Adams, M. W. W., & Kelly, R. M. (2022, September 28). APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Vol. 9.

By: T. Laemthong n, R. Bing n, J. Crosby n, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Caldicellulosiruptor; lignocellulose; glycoside hydrolase; surface layer homology (SLH) domain; plant biomass degradation; surface layer homology domain
MeSH headings : Glycoside Hydrolases / metabolism; Biomass; Xylans / metabolism; Xylose; Clostridiales / metabolism; Cellulose / metabolism; Plants / microbiology; Populus
Sources: Web Of Science, ORCID
Added: October 11, 2022

2021 journal article

A genomic catalog of Earthโ€™s microbiomes

Nature Biotechnology, 39, 499โ€“509.

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Air Microbiology; Animals; Archaea / classification; Archaea / genetics; Archaea / isolation & purification; Bacteria / classification; Bacteria / genetics; Bacteria / isolation & purification; Catalogs as Topic; Ecosystem; Humans; Metabolomics / methods; Metagenome; Metagenomics / methods; Phylogeny; Soil Microbiology; Viruses / genetics; Viruses / isolation & purification; Water Microbiology
Sources: Web Of Science, ORCID
Added: July 27, 2021

2021 chapter

Enzymes from extremely thermophilic bacteria and archaea: Current status and future prospects

In N. A. Arora, S. Agnihotri, & J. Mishra (Eds.), Extremozymes and their Industrial Applications. St. Louis, MO: Elsevier Academic Press.

By: T. Laemthong, A. Lewis, J. Crosby, R. Bing, W. Schneider, D. Willard, J. Counts, R. Kellyโ€‰

Ed(s): N. Arora, S. Agnihotri & J. Mishra

Source: NC State University Libraries
Added: July 27, 2021

2021 article

Fox Cluster determinants for iron biooxidation in the extremely thermoacidophilic Sulfolobaceae

Counts, J. A., Vitko, N. P., & Kelly, R. M. (2021, August 30). ENVIRONMENTAL MICROBIOLOGY, Vol. 8.

By: J. Counts n, N. Vitko n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Animals; Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Iron / metabolism; Phylogeny; Proteomics; Sulfolobaceae / genetics
Sources: Web Of Science, ORCID
Added: September 7, 2021

2021 journal article

Genome-Scale Metabolic Model of Caldicellulosiruptor bescii Reveals Optimal Metabolic Engineering Strategies for Bio-based Chemical Production

MSystems, 6(3).

By: D. Rodionovโ€‰*, I. Rodionova, V. Rodionov, A. Arzamasov, K. Zhangโ€‰*, G. Rubinstein*, T. Tanwee*, R. Bing n ...

co-author countries: Russian Federation ๐Ÿ‡ท๐Ÿ‡บ United States of America ๐Ÿ‡บ๐Ÿ‡ธ

Ed(s): Z. Summers

author keywords: Caldicellulosiruptor bescii; lignocellulose degradation; carbohydrate; Caldicellulosiruptor; carbohydrate utilization; comparative genomics; metabolic reconstruction; plant biomass degradation; regulon
Sources: Crossref, ORCID, Web Of Science
Added: July 14, 2021

2021 journal article

Integrating Bioinformatics Tools into Inquiry-based Molecular Biology Laboratory Education Modules

Frontiers in Education, 6.

By: C. Goller nโ€‰, M. Srougi nโ€‰, S. Chen nโ€‰, L. Schenkman n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: bioinformatics; science education; molecular biotechnology; software tools; case studies
Sources: Web Of Science, ORCID
Added: August 23, 2021

2021 journal article

Intersection of Biotic and Abiotic Sulfur Chemistry Supporting Extreme Microbial Life in Hot Acid

JOURNAL OF PHYSICAL CHEMISTRY B, 125(20), 5243โ€“5257.

By: D. Willard n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Metals; Oxidation-Reduction; Oxidoreductases / metabolism; Sulfolobus acidocaldarius; Sulfur
Sources: Web Of Science, ORCID
Added: June 14, 2021

2021 journal article

Intersection of Biotic and Abiotic Sulfur Chemistry Supporting Extreme Microbial Life in Hot Acid

Journal of Physical Chemistry B, 125(20), 5243โ€“5257.

By: D. Willard & R. Kellyโ€‰

Sources: Crossref, ORCID
Added: July 27, 2021

2021 journal article

The biology of thermoacidophilic archaea from the order Sulfolobales

FEMS Microbiology Reviews, 45(4).

By: A. Lewis n, A. Recaldeโ€‰*, C. Brรคsen*, J. Counts n, P. Nussbaum*, J. Bost*, L. Schocke*, L. Shenโ€‰* ...

co-author countries: Belgium ๐Ÿ‡ง๐Ÿ‡ช Germany ๐Ÿ‡ฉ๐Ÿ‡ช United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Archaea; Thermoacidophiles; Sulfolobales
MeSH headings : Archaea / genetics; Biology; Iron; Sulfolobales
Sources: Crossref, ORCID, Web Of Science
Added: July 14, 2021

2021 journal article

Thermophilic microbial deconstruction and conversion of natural and transgenic lignocellulose

Environmental Microbiology Reports, 13(3), 272โ€“293.

By: R. Bing n, D. Sulisโ€‰ n, J. Wang nโ€‰, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Biomass; Lignin / chemistry; Plants / metabolism
Sources: Web Of Science, Crossref, ORCID
Added: April 12, 2021

2021 journal article

Transcriptional Regulation of Plant Biomass Degradation and Carbohydrate Utilization Genes in the Extreme Thermophile Caldicellulosiruptor bescii

MSystems, 6(3).

By: D. Rodionovโ€‰*, I. Rodionovaโ€‰*, V. Rodionovโ€‰*, A. Arzamasovโ€‰*, K. Zhangโ€‰*, G. Rubinstein*, T. Tanwee*, R. Bingโ€‰ n ...

co-author countries: Germany ๐Ÿ‡ฉ๐Ÿ‡ช New Zealand ๐Ÿ‡ณ๐Ÿ‡ฟ Russian Federation ๐Ÿ‡ท๐Ÿ‡บ United States of America ๐Ÿ‡บ๐Ÿ‡ธ

Ed(s): Z. Summers

Sources: Crossref, ORCID
Added: July 14, 2021

2020 journal article

Engineering the cellulolytic extreme thermophile Caldicellulosiruptor bescii to reduce carboxylic acids to alcohols using plant biomass as the energy source

Journal of Industrial Microbiology and Biotechnology, 47(8), 585โ€“597.

By: G. Rubinstein*, G. Lipscomb*, A. Williams-Rhaesa*, G. Schutโ€‰*, R. Kelly nโ€‰ & M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Thermophile; Biofuels; Lignocellulose; Metabolic engineering; Caldicellulosiruptor
MeSH headings : Alcohol Dehydrogenase / genetics; Alcohol Dehydrogenase / metabolism; Aldehyde Oxidoreductases / genetics; Aldehyde Oxidoreductases / metabolism; Biofuels / analysis; Biomass; Caldicellulosiruptor / genetics; Carboxylic Acids / metabolism; Ethanol / metabolism; Fermentation; Lignin / metabolism; Microorganisms, Genetically-Modified; Oxidation-Reduction; Panicum / metabolism; Panicum / microbiology; Pyrococcus furiosus / enzymology; Thermoanaerobacter / enzymology
Sources: Web Of Science, ORCID, Crossref
Added: August 31, 2020

2020 journal article

Genome Sequences of Five Type Strain Members of the Archaeal Family Sulfolobaceae, Acidianus ambivalens, Acidianus infernus, Stygiolobus azoricus, Sulfuracidifex metallicus, and Sulfurisphaera ohwakuensis

MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 9(11).

By: J. Counts n, N. Vitko n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Web Of Science, ORCID
Added: April 6, 2020

2020 journal article

Life in hot acid: a genomeโ€based reassessment of the archaeal order Sulfolobales

Environmental Microbiology, 23(7), 3568โ€“3584.

By: J. Counts n, D. Willard n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Acidianus; Archaea / genetics; Hot Springs; Oxidation-Reduction; Phylogeny; Sulfolobaceae / genetics; Sulfolobales
Sources: Web Of Science, Crossref, ORCID
Added: September 21, 2020

2020 journal article

Metabolically engineeredCaldicellulosiruptor besciias a platform for producing acetone and hydrogen from lignocellulose

BIOTECHNOLOGY AND BIOENGINEERING, 117(12), 3799โ€“3808.

By: C. Straub n, R. Bing n, J. Otten n, L. Kellerโ€‰ n, B. Zeldes n, M. Adamsโ€‰*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: acetone; Caldicellulosiruptor bescii; extreme thermophiles; metabolic engineering
MeSH headings : Acetone / metabolism; Biomass; Caldicellulosiruptor / genetics; Caldicellulosiruptor / metabolism; Hydrogen / metabolism; Lignin / metabolism; Metabolic Engineering
Sources: Web Of Science, ORCID
Added: September 7, 2020

2020 journal article

Modification of the glycolytic pathway in Pyrococcus furiosus and the implications for metabolic engineering

EXTREMOPHILES, 24(4), 511โ€“518.

By: C. Straub n, G. Schut*, J. Otten n, L. Kellerโ€‰ n, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Pyrococcus; Thermophile; Central metabolism; Glycolysis
MeSH headings : Fermentation; Glyceraldehyde 3-Phosphate; Glycolysis; Metabolic Engineering; Pyrococcus furiosus
Sources: Web Of Science, ORCID
Added: June 1, 2020

2020 article

The biology and biotechnology of the genus Caldicellulosiruptor: recent developments in 'Caldi World'

Lee, L. L., Crosby, J. R., Rubinstein, G. M., Laemthong, T., Bing, R. G., Straub, C. T., โ€ฆ Kelly, R. M. (2020, January). EXTREMOPHILES, Vol. 24, pp. 1โ€“15.

By: L. Lee n, J. Crosby n, G. Rubinstein*, T. Laemthong n, R. Bingโ€‰ n, C. Straub n, M. Adamsโ€‰*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Caldicellulosiruptor; Extreme thermophiles; Lignocellulose
MeSH headings : Biomass; Biotechnology; Clostridiales; Glycoside Hydrolases; Hot Springs
Sources: Web Of Science, ORCID
Added: February 27, 2020

2020 journal article

Use of the lignocellulose-degrading bacterium Caldicellulosiruptor bescii to assess recalcitrance and conversion of wild-type and transgenic poplar

BIOTECHNOLOGY FOR BIOFUELS, 13(1).

By: C. Straub n, R. Bing n, J. Wang nโ€‰, V. Chiang n, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Caldicellulosiruptor; Extreme thermophiles; Lignocellulose; Biofuel; Poplar
Sources: Web Of Science, ORCID
Added: April 6, 2020

2019 journal article

Comparative Biochemical and Structural Analysis of Novel Cellulose Binding Proteins (Tapirins) from Extremely Thermophilic Caldicellulosiruptor Species

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 85(3).

By: L. Lee n, W. Hart n, V. Lunin, M. Alahuhtaโ€‰*, Y. Bombleโ€‰*, M. Himmel*, S. Blumer-Schuetteโ€‰ n, M. Adamsโ€‰*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Caldicellulosiruptor; cellulose binding protein; lignocellulose; tapirin
MeSH headings : Amino Acid Sequence; Bacterial Proteins / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Carrier Proteins / chemistry; Carrier Proteins / genetics; Carrier Proteins / metabolism; Cellulose / chemistry; Cellulose / metabolism; Firmicutes / chemistry; Firmicutes / genetics; Firmicutes / metabolism; Genome, Bacterial; Hot Springs / microbiology; Hot Temperature; Protein Domains
Sources: Web Of Science, ORCID
Added: February 11, 2019

2019 journal article

Determinants of sulphur chemolithoautotrophy in the extremely thermoacidophilic Sulfolobales

ENVIRONMENTAL MICROBIOLOGY, 21(10), 3696โ€“3710.

By: B. Zeldes n, A. Loder n, J. Counts n, M. Haque n, K. Widneyโ€‰ n, L. Kellerโ€‰ n, S. Albersโ€‰*, R. Kelly nโ€‰

co-author countries: Germany ๐Ÿ‡ฉ๐Ÿ‡ช United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Autotrophic Processes; Chemoautotrophic Growth; Oxidation-Reduction; Oxidoreductases / metabolism; Sulfolobales / metabolism; Sulfur / metabolism; Thiosulfates / metabolism
Sources: Web Of Science, ORCID
Added: August 12, 2019

2019 journal article

Extreme thermophiles as emerging metabolic engineering platforms

Current Opinion in Biotechnology, 59, 55โ€“64.

By: J. Crosby n, T. Laemthong n, A. Lewis n, C. Straub n, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Archaea; Biotechnology; Genetic Engineering; Metabolic Engineering; Waste Products
Sources: Web Of Science, Crossref, ORCID
Added: November 25, 2019

2019 journal article

Extremely Thermoacidophilic Metallosphaera Species Mediate Mobilization and Oxidation of Vanadium and Molybdenum Oxides

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 85(5).

By: G. Wheaton n, N. Vitko n, J. Counts n, J. Dulkis n, I. Podolsky n, A. Mukherjee n, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Metallosphaera; biomining; extreme thermoacidophily; metal biooxidation; molybdenum; vanadium
MeSH headings : Archaeal Proteins / genetics; Copper / metabolism; Ferric Compounds / metabolism; Gene Expression Profiling; Genome, Archaeal; Hot Temperature; Hydrogen-Ion Concentration; Molybdenum / metabolism; Oxidation-Reduction; Oxides / metabolism; Oxygen; Sulfolobaceae / genetics; Sulfolobaceae / metabolism; Sulfur Compounds / metabolism; Transcriptome; Uranium / metabolism; Vanadium / metabolism
Sources: Web Of Science, ORCID
Added: March 11, 2019

2019 journal article

Lignocellulose solubilization and conversion by extremely thermophilic Caldicellulosiruptor bescii improves by maintaining metabolic activity

BIOTECHNOLOGY AND BIOENGINEERING, 116(8), 1901โ€“1908.

By: C. Straub n, P. Khatibi n, J. Otten n, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: biofuels; bioreactor; Caldicellulosiruptor bescii; lignocellulose; switchgrass
MeSH headings : Biofuels / microbiology; Bioreactors; Caldicellulosiruptor; Fermentation; Firmicutes / growth & development; Firmicutes / metabolism; Lignin / metabolism; Panicum / metabolism; Solubility
Sources: Web Of Science, ORCID
Added: August 19, 2019

2019 journal article

Quantitative fermentation of unpretreated transgenic poplar by Caldicellulosiruptor bescii

NATURE COMMUNICATIONS, 10(1).

By: C. Straub n, P. Khatibi n, J. Wang nโ€‰, J. Conway n, A. Williams-Rhaesa*, I. Peszlen nโ€‰, V. Chiang n, M. Adamsโ€‰*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ

Contributors: C. Straub n, P. Khatibi n, J. Wang nโ€‰, J. Conway n, A. Williams-Rhaesa*, I. Peszlen nโ€‰, V. Chiang n, M. Adamsโ€‰*, R. Kelly nโ€‰

MeSH headings : Biomass; Cellulose / metabolism; Clostridiales / genetics; Clostridiales / metabolism; Ethanol / metabolism; Fermentation; Industrial Microbiology; Lignin / metabolism; Metabolic Engineering; Plants, Genetically Modified / chemistry; Plants, Genetically Modified / genetics; Plants, Genetically Modified / metabolism; Polysaccharides / metabolism; Populus / chemistry; Populus / genetics; Populus / metabolism
Sources: Web Of Science, ORCID
Added: August 26, 2019

2019 journal article

The thermophilic biomass-degrading bacterium Caldicellulosiruptor bescii utilizes two enzymes to oxidize glyceraldehyde 3-phosphate during glycolysis

JOURNAL OF BIOLOGICAL CHEMISTRY, 294(25), 9995โ€“10005.

By: I. Scott*, G. Rubinstein*, F. Poole*, G. Lipscomb*, G. Schutโ€‰*, A. Williams-Rhaesa*, D. Stevenson*, D. Amador-Noguezโ€‰*, R. Kelly nโ€‰, M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: glycolysis; cellulose; metabolism; metabolomics; metalloenzyme; oxidation-reduction (redox); anaerobic glycolysis; iron-sulfur protein; pterin; tungsten
MeSH headings : Biomass; Caldicellulosiruptor; Firmicutes / growth & development; Firmicutes / metabolism; Glyceraldehyde 3-Phosphate / chemistry; Glyceraldehyde 3-Phosphate / metabolism; Glyceraldehyde 3-Phosphate Dehydrogenase (NADP+) / metabolism; Glyceraldehyde-3-Phosphate Dehydrogenases / metabolism; Glycolysis; Metabolome; Oxidation-Reduction; Phylogeny
Sources: Web Of Science, ORCID
Added: July 22, 2019

2018 journal article

A synthetic enzymatic pathway for extremely thermophilic acetone production based on the unexpectedly thermostable acetoacetate decarboxylase from Clostridium acetobutylicum

BIOTECHNOLOGY AND BIOENGINEERING, 115(12), 2951โ€“2961.

By: B. Zeldes n, C. Straub n, J. Otten n, M. Adams* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: acetone; biotransformations; extreme thermophiles
MeSH headings : Acetone / metabolism; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Carboxy-Lyases / genetics; Carboxy-Lyases / metabolism; Clostridium acetobutylicum / enzymology; Clostridium acetobutylicum / genetics; Clostridium acetobutylicum / metabolism; Enzyme Stability; Hot Temperature; Metabolic Engineering; Metabolic Networks and Pathways / genetics; Synthetic Biology / methods
Sources: Web Of Science, ORCID
Added: December 3, 2018

2018 review

Biotechnology of extremely thermophilic archaea

[Review of ]. FEMS MICROBIOLOGY REVIEWS, 42(5), 543โ€“578.

By: C. Straub n, J. Counts n, D. Nguyenโ€‰*, C. Wuโ€‰*, B. Zeldes n, J. Crosby n, J. Conwayโ€‰ n, J. Otten n ...

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: extremely thermophilic archaea; biotechnology; biocatalysis; biooxidation
MeSH headings : Archaea / genetics; Archaea / physiology; Biotechnology / trends; Hot Temperature; Industrial Microbiology / trends; Metabolic Engineering / trends
Sources: Web Of Science, ORCID
Added: November 19, 2018

2018 journal article

Complete Genome Sequences of Extremely Thermoacidophilic Metal-Mobilizing Type Strain Members of the Archaeal Family Sulfolobaceae, Acidianus brierleyi DSM-1651, Acidianus sulfidivorans DSM-18786, and Metallosphaera hakonensis DSM-7519

MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 7(2).

By: J. Counts n, N. Vitko n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Web Of Science, ORCID
Added: December 31, 2018

2018 journal article

Engineering redox-balanced ethanol production in the cellulolytic and extremely thermophilic bacterium, Caldicellulosiruptor bescii

Metabolic Engineering Communications, 7, e00073.

By: A. Williams-Rhaesa*, G. Rubinstein*, I. Scott*, G. Lipscomb*, F. Poole, II, R. Kelly nโ€‰, M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Crossref, ORCID
Added: February 24, 2020

2018 journal article

Genus-Wide Assessment of Lignocellulose Utilization in the Extremely Thermophilic Genus Caldicellulosiruptor by Genomic, Pangenomic, and Metagenomic Analyses

Applied and Environmental Microbiology, 84(9), e02694โ€“17.

By: L. Lee n, S. Blumer-Schuetteโ€‰ n, J. Izquierdo n, J. Zurawski n, A. Loder n, J. Conwayโ€‰ n, J. Elkins*, M. Podarโ€‰* ...

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ

Ed(s): I. Cann

author keywords: Caldicellulosiruptor; extreme thermophile; pangenome
MeSH headings : Cellulose / metabolism; Firmicutes / classification; Firmicutes / genetics; Firmicutes / metabolism; Genome, Bacterial; Genomics; Lignin / metabolism; Metagenome; Metagenomics
Sources: Crossref, ORCID
Added: July 27, 2021

2018 journal article

Native xylose-inducible promoter expands the genetic tools for the biomass-degrading, extremely thermophilic bacterium Caldicellulosiruptor bescii

EXTREMOPHILES, 22(4), 629โ€“638.

By: A. Williams-Rhaesa*, N. Awuku*, G. Lipscomb*, F. Poole*, G. Rubinstein*, J. Conwayโ€‰ n, R. Kelly nโ€‰, M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Anaerobes; Biodegradation of cellulosic; Biotechnology of thermophiles; Genetics; Molecular biology; Genetics of extremophiles
MeSH headings : Biotransformation; Cellulose / metabolism; Firmicutes / drug effects; Firmicutes / genetics; Firmicutes / growth & development; Firmicutes / metabolism; Industrial Microbiology / methods; L-Lactate Dehydrogenase / genetics; L-Lactate Dehydrogenase / metabolism; Promoter Regions, Genetic; Thermotolerance; Xylose / metabolism; Xylose / pharmacology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 journal article

Novel multidomain, multifunctional glycoside hydrolases from highly lignocellulolytic Caldicellulosiruptor species

AICHE JOURNAL, 64(12), 4218โ€“4228.

By: J. Conwayโ€‰ n, J. Crosby n, A. Hren n, R. Southerland n, L. Lee n, V. Lunin, P. Alahuhta*, M. Himmel* ...

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Caldicellulosiruptor; lignocellulose; glycoside hydrolase; cellulase
Sources: Web Of Science, ORCID
Added: November 26, 2018

2018 journal article

Parsing in vivo and in vitro contributions to microcrystalline cellulose hydrolysis by multidomain glycoside hydrolases in the Caldicellulosiruptor bescii secretome

BIOTECHNOLOGY AND BIOENGINEERING, 115(10), 2426โ€“2440.

By: J. Conwayโ€‰ n, J. Crosby n, B. McKinley n, N. Seals n, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Caldicellulosiruptor berci; cellulase; extreme thermophile; glycoside hydrolase; lignocellulose; secretome
MeSH headings : Cellulose / chemistry; Cellulose / metabolism; Firmicutes / enzymology; Firmicutes / genetics; Glycoside Hydrolases / chemistry; Glycoside Hydrolases / genetics; Glycoside Hydrolases / metabolism; Hydrolysis
Sources: Web Of Science, ORCID
Added: October 29, 2018

2018 journal article

Secretion and fusion of biogeochemically active archaeal membrane vesicles

GEOBIOLOGY, 16(6), 659โ€“673.

By: T. Johnson*, C. Mach*, R. Grove*, R. Kelly nโ€‰, K. Van Cott* & P. Blum*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: archaea; membrane fusion; regulated secretion; thermoacidophiles; vesicles
MeSH headings : Archaea / metabolism; Archaea / physiology; Archaeal Proteins / metabolism
Sources: Web Of Science, ORCID
Added: October 29, 2018

2018 journal article

Sequential processing with fermentative Caldicellulosiruptor kronotskyensis and chemolithoautotrophic Cupriavidus necator for converting rice straw and CO2 to polyhydroxybutyrate

BIOTECHNOLOGY AND BIOENGINEERING, 115(6), 1624โ€“1629.

By: X. Peng*, R. Kelly nโ€‰ & Y. Hanโ€‰*

co-author countries: China ๐Ÿ‡จ๐Ÿ‡ณ United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: biorefinery; Caldicellulosiruptor; CO2 fixation; Cupriavidus necator; fermentation; lignocellulose
MeSH headings : Animals; Carbon Dioxide / metabolism; Cupriavidus necator / growth & development; Cupriavidus necator / metabolism; Firmicutes / growth & development; Firmicutes / metabolism; Hydroxybutyrates / metabolism; Oryza / metabolism; Plant Stems / metabolism; Polyesters / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 journal article

Simultaneous biosynthesis of (R)-acetoin and ethylene glycol from D-xylose through in vitro metabolic engineering

Metabolic Engineering Communications, 7, e00074.

By: X. Jiaโ€‰*, R. Kelly nโ€‰ & Y. Hanโ€‰*

co-author countries: China ๐Ÿ‡จ๐Ÿ‡ณ United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Crossref, ORCID
Added: February 24, 2020

2018 journal article

The diversity and specificity of the extracellular proteome in the cellulolytic bacterium Caldicellulosiruptor bescii is driven by the nature of the cellulosic growth substrate

BIOTECHNOLOGY FOR BIOFUELS, 11.

co-author countries: Germany ๐Ÿ‡ฉ๐Ÿ‡ช United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Caldicellulosiruptor bescii; Carbohydrate-active enzymes (CAZymes); Extracellular solute binding proteins (ESBPs); Protein of unknown function (PUF); Glycosyl hydrolases (GH); Mass spectrometry; Switchgrass; Xylan; Avicel; C5 substrates; C6 substrates; Lignocellulosic; Extracellular
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 journal article

Uncoupling Fermentative Synthesis of Molecular Hydrogen from Biomass Formation in Thermotoga maritima

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 84(17).

By: R. Singhโ€‰*, D. Whiteโ€‰*, Y. Demirel*, R. Kelly nโ€‰, K. Noll* & P. Blum*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Hyperthermophile; MalK; hydrogen; transient gene inactivation; adaptive laboratory evolution; bacterial genetics; fermentation; hydrogen; Thermotoga maritima
MeSH headings : ATP-Binding Cassette Transporters / genetics; Bacterial Proteins / genetics; Biological Transport / genetics; Biomass; Bioreactors / microbiology; Energy Metabolism / genetics; Energy Metabolism / physiology; Hydrogen / metabolism; L-Lactate Dehydrogenase / genetics; Lactic Acid / biosynthesis; Maltose / metabolism; Thermotoga maritima / genetics; Thermotoga maritima / metabolism
Sources: Web Of Science, ORCID
Added: October 19, 2018

2017 journal article

Bioavailability of Carbohydrate Content in Natural and Transgenic Switchgrasses for the Extreme Thermophile Caldicellulosiruptor bescii

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 83(17).

By: J. Zurawski n, P. Khatibi n, H. Akinoshoโ€‰*, C. Straub n, S. Compton n, J. Conway n, L. Lee n, A. Ragauskasโ€‰* ...

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Caldicellulosiruptor; switchgrass; lignocellulose deconstruction and conversion; extreme thermophiles; lignocellulose
MeSH headings : Biomass; Fermentation; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / metabolism; Hot Temperature; Lignin / chemistry; Lignin / metabolism; Panicum / chemistry; Panicum / genetics; Panicum / metabolism; Panicum / microbiology; Plants, Genetically Modified / chemistry; Plants, Genetically Modified / genetics; Plants, Genetically Modified / metabolism; Plants, Genetically Modified / microbiology; Polysaccharides / chemistry; Polysaccharides / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2017 journal article

C aldicellulosiruptor saccharolyticus transcriptomes reveal consequences of chemical pretreatment and genetic modification of lignocellulose

Microbial Biotechnology, 10(6), 1546โ€“1557.

By: S. Blumerโ€Schuetteโ€‰ n, J. Zurawski n, J. Conwayโ€‰ n, P. Khatibi n, D. Lewis n, Q. Liโ€‰ n, V. Chiangโ€‰ n, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Acids / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Biotransformation; Firmicutes / genetics; Firmicutes / metabolism; Lignin / metabolism; Populus / chemistry; Populus / genetics; Populus / metabolism; Populus / microbiology; Transcriptome
Sources: Crossref, ORCID
Added: July 21, 2021

2017 journal article

Diversity of bacteria and archaea from two shallow marine hydrothermal vents from Vulcano Island

Extremophiles, 21(4), 733โ€“742.

By: G. Antranikianโ€‰*, M. Suleimanโ€‰*, C. Schรคfers*, M. Adams, S. Bartolucci, J. Blamey, N. Birkeland, E. Bonch-Osmolovskaya ...

co-author countries: Germany ๐Ÿ‡ฉ๐Ÿ‡ช
author keywords: Hyperthermophiles; Archaea; Diversity; Hydrothermal marine shallow vents
MeSH headings : Archaea / classification; Archaea / genetics; Bacteria / classification; Bacteria / genetics; Hydrothermal Vents / microbiology; Italy; Marine Biology; RNA, Ribosomal, 16S / genetics
Sources: Crossref, ORCID
Added: August 3, 2021

2017 journal article

Ethanol production by the hyperthermophilic archaeon Pyrococcus furiosus by expression of bacterial bifunctional alcohol dehydrogenases

Microbial Biotechnology, 10(6), 1535โ€“1545.

By: M. Kellerโ€‰*, G. Lipscomb*, D. Nguyenโ€‰*, A. Crowley*, G. Schutโ€‰*, I. Scott*, R. Kelly nโ€‰, M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Crossref, ORCID
Added: July 21, 2021

2017 review

Extremely thermophilic energy metabolisms: biotechnological prospects

[Review of ]. CURRENT OPINION IN BIOTECHNOLOGY, 45, 104โ€“112.

By: C. Straub n, B. Zeldes n, G. Schutโ€‰*, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Archaea / classification; Archaea / genetics; Archaea / metabolism; Biotechnology / methods; Carbon Dioxide / metabolism; Chemoautotrophic Growth; Energy Metabolism; Hot Temperature; Lignin / metabolism; Metabolic Engineering
Sources: Web Of Science, ORCID
Added: August 6, 2018

2017 journal article

Functional Analysis of the Glucan Degradation Locus in Caldicellulosiruptor bescii Reveals Essential Roles of Component Glycoside Hydrolases in Plant Biomass Deconstruction

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 83(24).

By: J. Conway n, B. McKinley n, N. Seals n, D. Hernandez n, P. Khatibi n, S. Poudelโ€‰*, R. Giannoneโ€‰*, R. Hettich* ...

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Caldicellulosiruptor; extreme thermophile; cellulose degradation; lignocellulose; glycoside hydrolase; cellulase
MeSH headings : Bacterial Proteins / metabolism; Cellulose / chemistry; Firmicutes / genetics; Firmicutes / metabolism; Glucans / metabolism; Glycoside Hydrolases / metabolism; Panicum / chemistry; Populus / chemistry
Sources: Web Of Science, ORCID
Added: August 6, 2018

2017 journal article

Genome Stability in Engineered Strains of the Extremely Thermophilic Lignocellulose-Degrading Bacterium Caldicellulosiruptor bescii

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 83(14).

By: A. Williams-Rhaesa*, F. Poole*, J. Dinsmore*, G. Lipscomb*, G. Rubinstein*, I. Scott*, J. Conway n, L. Lee n ...

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Southern blotting; genome sequencing; insertion elements; kanamycin resistance
MeSH headings : Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Genetic Engineering; Genome, Bacterial; Genomic Instability; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / metabolism; Hot Temperature; Lignin / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2017 journal article

Impact of growth mode, phase, and rate on the metabolic state of the extremely thermophilic archaeon Pyrococcus furiosus

BIOTECHNOLOGY AND BIOENGINEERING, 114(12), 2947โ€“2954.

By: P. Khatibi n, C. Chou n, A. Loder n, J. Zurawski n, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: continuous culture; growth phase; growth rate; hyperthermophiles; Pyrococcus furiosus; transcriptome
MeSH headings : Archaeal Proteins / metabolism; Batch Cell Culture Techniques / methods; Cell Proliferation / physiology; Energy Metabolism / physiology; Pyrococcus furiosus / growth & development; Pyrococcus furiosus / metabolism; Transcriptome / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2017 review

Physiological, metabolic and biotechnological features of extremely thermophilic microorganisms

[Review of ]. WILEY INTERDISCIPLINARY REVIEWS-SYSTEMS BIOLOGY AND MEDICINE, 9(3).

By: J. Counts n, B. Zeldes n, L. Lee n, C. Straub n, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Biocatalysis; Carbohydrate Metabolism; Carbon Dioxide / metabolism; Glycolysis; Metabolic Engineering; Metals / chemistry; Metals / metabolism; Sulfolobales / metabolism; Sulfur / metabolism; Thermoanaerobacter / metabolism; Thermococcales / metabolism; Thermus / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2017 report

Sequestration of CO2 with H2 into useful products

(US Patent No. 9,587,256).

By: M. Adams, R. Kellyโ€‰, A. Hawkins, A. Menon, G. Lipscomb & G. Schut

Source: NC State University Libraries
Added: August 27, 2021

2017 article

The renaissance of life near the boiling point - at last, genetics and metabolic engineering

Adams, M. W. W., & Kelly, R. M. (2017, January). MICROBIAL BIOTECHNOLOGY, Vol. 10, pp. 37โ€“39.

By: M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Biotechnology / methods; Hot Temperature; Industrial Microbiology / methods; Metabolic Engineering / methods
Sources: Web Of Science, ORCID
Added: August 6, 2018

2017 journal article

Two Distinct alpha-L-Arabinofuranosidases in Caldicellulosiruptor Species Drive Degradation of Arabinose-Based Polysaccharides

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 83(13).

By: M. Abu Saleh, W. Hanโ€‰*, M. Luโ€‰*, B. Wangโ€‰*, H. Liโ€‰*, R. Kelly nโ€‰, F. Liโ€‰*

co-author countries: Bangladesh ๐Ÿ‡ง๐Ÿ‡ฉ China ๐Ÿ‡จ๐Ÿ‡ณ United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Arabinofuranosidase; bioenergy; glycoside hydrolase; hyperthermophiles; synergism
MeSH headings : Arabinose / metabolism; Bacterial Proteins / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Firmicutes / chemistry; Firmicutes / enzymology; Firmicutes / genetics; Firmicutes / metabolism; Glycoside Hydrolases / chemistry; Glycoside Hydrolases / genetics; Glycoside Hydrolases / metabolism; Hydrogen-Ion Concentration; Molecular Weight; Polysaccharides / metabolism; Substrate Specificity
Sources: Web Of Science, ORCID
Added: August 6, 2018

2017 journal article

VapC toxins drive cellular dormancy under uranium stress for the extreme thermoacidophile Metallosphaera prunae

ENVIRONMENTAL MICROBIOLOGY, 19(7), 2831โ€“2842.

By: A. Mukherjee n, G. Wheaton n, J. Counts n, B. Ijeomah n, J. Desai n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Bacterial Toxins / genetics; Bacterial Toxins / metabolism; Gene Expression Regulation, Bacterial / physiology; RNA Stability / physiology; Sulfolobaceae / genetics; Sulfolobaceae / growth & development; Sulfolobaceae / metabolism; Transcriptome; Uranium / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2016 journal article

A Highly Thermostable Kanamycin Resistance Marker Expands the Tool Kit for Genetic Manipulation of Caldicellulosiruptor bescii

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 82(14), 4421โ€“4428.

By: G. Lipscomb*, J. Conway n, S. Blumer-Schuette n, R. Kelly nโ€‰ & M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Firmicutes / genetics; Firmicutes / radiation effects; Genetics, Microbial / methods; Genomic Instability / radiation effects; Hot Temperature; Kanamycin Resistance; Molecular Biology / methods; Selection, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018

2016 journal article

Ancillary contributions of heterologous biotin protein ligase and carbonic anhydrase for CO2 incorporation into 3-hydroxypropionate by metabolically engineered Pyrococcus furiosus

Biotechnology and Bioengineering, 113(12), 2652โ€“2660.

By: H. Lian n, B. Zeldesโ€‰ n, G. Lipscomb*, A. Hawkins n, Y. Hanโ€‰ n, A. Loder n, D. Nishiyama n, M. Adamsโ€‰*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: biotin protein ligase; carboxylase; carbon dioxide; Pyrococcus furiosus; 3-hydroxypropionate; Metallosphaera sedula
MeSH headings : Carbon Dioxide / chemistry; Carbon Dioxide / metabolism; Carbon-Nitrogen Ligases / metabolism; Carbonic Anhydrases / genetics; Escherichia coli Proteins / metabolism; Lactic Acid / analogs & derivatives; Lactic Acid / biosynthesis; Lactic Acid / chemistry; Metabolic Engineering / methods; Protein Engineering / methods; Pyrococcus furiosus / physiology; Recombinant Proteins / genetics; Recombinant Proteins / metabolism; Repressor Proteins / metabolism; Sulfolobaceae / genetics; Sulfolobaceae / metabolism
Sources: Crossref, ORCID
Added: December 31, 2020

2016 chapter

Extreme Thermophiles as Metabolic Engineering Platforms: Strategies and Current Perspective

In C. Wittmann & J. C. Liao (Eds.), Industrial Biotechnology: Microorganisma (Vol. 1, pp. 505โ€“580).

By: A. Loder n, B. Zeldesโ€‰ n, J. Conway n, J. Counts n, C. Straub n, P. Khatibi n, L. Lee n, N. Vitko n ...

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ

Ed(s): C. Wittmann & J. Liao

Sources: Crossref, ORCID
Added: July 30, 2021

2016 journal article

Heterologous Production of an Energy-Conserving Carbon Monoxide Dehydrogenase Complex in the Hyperthermophile Pyrococcus furiosus

FRONTIERS IN MICROBIOLOGY, 7.

By: G. Schutโ€‰*, G. Lipscomb*, D. Nguyenโ€‰*, R. Kelly nโ€‰ & M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: hyperthermophile; archaea; hydrogen; carbon monoxide; energy; anaerobic respiration; Thermococcales
Sources: Web Of Science, ORCID
Added: August 6, 2018

2016 journal article

Multidomain, Surface Layer-associated Glycoside Hydrolases Contribute to Plant Polysaccharide Degradation by Caldicellulosiruptor Species

JOURNAL OF BIOLOGICAL CHEMISTRY, 291(13), 6732โ€“6747.

By: J. Conway*, W. Pierce n, J. Le n, G. Harper n, J. Wright n, A. Tucker n, J. Zurawski n, L. Lee*, S. Blumer-Schuette*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: biofuel; cell surface; cell surface enzyme; enzyme; glycoside hydrolase; plant cell wall; Caldicellulosiruptor; S-layer; lignocellulose
MeSH headings : Bacterial Proteins / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Cloning, Molecular; Clostridiales / chemistry; Clostridiales / classification; Clostridiales / enzymology; Escherichia coli / genetics; Escherichia coli / metabolism; Gene Expression; Genome, Bacterial; Glucans / metabolism; Glycoside Hydrolases / chemistry; Glycoside Hydrolases / genetics; Glycoside Hydrolases / metabolism; Kinetics; Mutation; Phylogeny; Polysaccharides / metabolism; Protein Binding; Protein Engineering; Protein Structure, Tertiary; Recombinant Proteins / chemistry; Recombinant Proteins / genetics; Recombinant Proteins / metabolism; Substrate Specificity; Wood / metabolism; Xylans / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2016 journal article

Reaction kinetic analysis of the 3-hydroxypropionate/4-hydroxybutyrate CO2 fixation cycle in extremely thermoacidophilic archaea

METABOLIC ENGINEERING, 38, 446โ€“463.

By: A. Loder n, Y. Han n, A. Hawkins n, H. Lian n, G. Lipscomb*, G. Schutโ€‰*, M. Kellerโ€‰*, M. Adamsโ€‰*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: CO2 fixation; 3-hydroxypropionate; 4-hydroxybutyrate; Metallosphaera sedula
MeSH headings : Archaea / metabolism; Carbon Dioxide / metabolism; Extremophiles / metabolism; Hydroxybutyrates / metabolism; Kinetics; Lactic Acid / analogs & derivatives; Lactic Acid / metabolism; Metabolic Clearance Rate; Metabolic Flux Analysis / methods; Metabolic Networks and Pathways / physiology; Models, Biological; Signal Transduction / physiology; Sulfolobaceae / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2016 journal article

Temperature-dependent acetoin production by Pyrococcus furiosus is catalyzed by a biosynthetic acetolactate synthase and its deletion improves ethanol production

METABOLIC ENGINEERING, 34, 71โ€“79.

By: D. Nguyenโ€‰*, G. Lipscomb*, G. Schutโ€‰*, B. Vaccaro*, M. Basenโ€‰*, R. Kelly nโ€‰, M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Archaea; Hyperthermophile; Genetic engineering; Acetolactate synthase; Acetoin; Ethanol
MeSH headings : Acetoin / metabolism; Acetolactate Synthase / biosynthesis; Acetolactate Synthase / genetics; Catalysis; Ethanol / isolation & purification; Ethanol / metabolism; Gene Deletion; Genetic Enhancement / methods; Metabolic Engineering / methods; Metabolic Networks and Pathways / physiology; Pyrococcus furiosus / genetics; Pyrococcus furiosus / metabolism; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018

2016 journal article

Transcriptomes of the Extremely Thermoacidophilic Archaeon Metallosphaera sedula Exposed to Metal "Shock" Reveal Generic and Specific Metal Responses

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 82(15), 4613โ€“4627.

By: G. Wheaton n, A. Mukherjee n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

A New Class of Tungsten-Containing Oxidoreductase in Caldicellulosiruptor, a Genus of Plant Biomass-Degrading Thermophilic Bacteria

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 81(20), 7339โ€“7347.

By: I. Scott*, G. Rubinstein*, G. Lipscomb*, M. Basenโ€‰*, G. Schutโ€‰*, A. Rhaesa*, W. Lancaster*, F. Poole*, R. Kelly nโ€‰, M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Aldehydes / metabolism; Bacterial Proteins / metabolism; Gram-Positive Bacteria / enzymology; Gram-Positive Bacteria / metabolism; Oxidation-Reduction; Oxidoreductases / chemistry; Oxidoreductases / metabolism; Pyrococcus furiosus / enzymology; Pyrococcus furiosus / metabolism; Tungsten / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

A hybrid synthetic pathway for butanol production by a hyperthermophilic microbe

METABOLIC ENGINEERING, 27, 101โ€“106.

By: M. Kellerโ€‰*, G. Lipscomb*, A. Loder n, G. Schutโ€‰*, R. Kelly nโ€‰ & M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Butanol; Biofuels; Hyperthermophile; Module; Hybrid; Pathway
MeSH headings : 1-Butanol / metabolism; Acetyl Coenzyme A / genetics; Acetyl Coenzyme A / metabolism; Metabolic Engineering / methods; Thermoanaerobacterium / genetics; Thermoanaerobacterium / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

A mutant ('lab strain') of the hyperthermophilic archaeon Pyrococcus furiosus, lacking flagella, has unusual growth physiology

EXTREMOPHILES, 19(2), 269โ€“281.

By: D. Lewis n, J. Notey n, S. Chandrayanโ€‰*, A. Loder n, G. Lipscomb*, M. Adamsโ€‰*, R. Kelly nโ€‰

co-author countries: Denmark ๐Ÿ‡ฉ๐Ÿ‡ฐ United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Pyrococcus furiosus; Hyperthermophile; Archaeon; Growth physiology; Flagella
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

Alcohol Selectivity in a Synthetic Thermophilic n-Butanol Pathway Is Driven by Biocatalytic and Thermostability Characteristics of Constituent Enzymes

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 81(20), 7187โ€“7200.

By: A. Loder n, B. Zeldes n, G. Garrison n, G. Lipscomb*, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : 1-Butanol / metabolism; Acetyl-CoA C-Acyltransferase / metabolism; Acyl Coenzyme A / metabolism; Alcohol Dehydrogenase / metabolism; Alcohol Oxidoreductases / metabolism; Aldehyde Oxidoreductases / metabolism; Biocatalysis; Chromatography, Gas; Clostridium acetobutylicum / metabolism; Clostridium thermocellum / metabolism; Thermoanaerobacter / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

Bioprocessing analysis of Pyrococcus furiosus strains engineered for CO2-based 3-hydroxypropionate production

BIOTECHNOLOGY AND BIOENGINEERING, 112(8), 1533โ€“1543.

By: A. Hawkins n, H. Lian n, B. Zeldes n, A. Loder n, G. Lipscomb*, G. Schutโ€‰*, M. Kellerโ€‰*, M. Adamsโ€‰*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: 3-hydroxypropionate; CO2 fixation; Metallosphaera sedula; Pyrococcus furiosus
MeSH headings : Bioreactors / microbiology; Carbon Dioxide / metabolism; Gene Expression Profiling; Hot Temperature; Lactic Acid / analogs & derivatives; Lactic Acid / metabolism; Maltose / metabolism; Metabolic Engineering / methods; Metabolic Networks and Pathways / genetics; Pyrococcus furiosus / genetics; Pyrococcus furiosus / metabolism; Pyrococcus furiosus / radiation effects; Sulfolobaceae / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

Comparative Analysis of Extremely Thermophilic Caldicellulosiruptor Species Reveals Common and Unique Cellular Strategies for Plant Biomass Utilization

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 81(20), 7159โ€“7170.

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Bacteria / metabolism; Biomass; Cellulase / metabolism; Panicum / enzymology; Panicum / metabolism; Plants / enzymology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

Complete Genome Sequences of Caldicellulosiruptor sp. Strain Rt8.B8, Caldicellulosiruptor sp. Strain Wai35.B1, and โ€œ Thermoanaerobacter cellulolyticus โ€

Complete Genome Sequences of Caldicellulosiruptor sp. Strain Rt8.B8, Caldicellulosiruptor sp. Strain Wai35.B1, and โ€œ Thermoanaerobacter cellulolyticus .โ€ Genome Announcements, 3(3).

By: L. Lee n, J. Izquierdo n, S. Blumer-Schuetteโ€‰ n, J. Zurawski n, J. Conwayโ€‰ n, R. Cottinghamโ€‰*, M. Huntemannโ€‰*, A. Copeland* ...

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Crossref, ORCID
Added: July 21, 2021

2015 journal article

Discrete and Structurally Unique Proteins (Tapirins) Mediate Attachment of Extremely Thermophilic Caldicellulosiruptor Species to Cellulose

JOURNAL OF BIOLOGICAL CHEMISTRY, 290(17), 10645โ€“10656.

By: S. Blumer-Schuette n, M. Alahuhtaโ€‰*, J. Conway n, L. Lee n, J. Zurawski n, R. Giannoneโ€‰*, R. Hettichโ€‰*, V. Lunin, M. Himmel*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Adsorption; Bacteria / genetics; Bacteria / metabolism; Bacteria / ultrastructure; Bacterial Adhesion / physiology; Bacterial Proteins / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Binding Sites; Cellulose / metabolism; Fimbriae, Bacterial / metabolism; Genes, Bacterial; Models, Molecular; Phylogeny; Plants / microbiology; Protein Structure, Tertiary; Recombinant Proteins / chemistry; Recombinant Proteins / genetics; Recombinant Proteins / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 review

Extremely thermophilic microorganisms as metabolic engineering platforms for production of fuels and industrial chemicals

[Review of ]. FRONTIERS IN MICROBIOLOGY, 6.

By: B. Zeldes n, M. Kellerโ€‰*, A. Loder n, C. Straub n, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: extreme thermophiles; metabolic engineering; bio-based chemicals; genetics; biotechnology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 report

Genetically engineered microbes and methods for converting organic acid to alcohols

(US Patent Application No. 14/670,601).

By: R. Kellyโ€‰, M. Adams, G. Schut & M. Basen

Source: NC State University Libraries
Added: August 27, 2021

2015 journal article

Machine learning reveals sex-specific 17ฮฒ-estradiol-responsive expression patterns in white perch (Morone americana) plasma proteins

PROTEOMICS, 15(15), 2678โ€“2690.

By: J. Schilling n, A. Nepomuceno n, A. Planchart nโ€‰, J. Yoder nโ€‰, R. Kelly nโ€‰, D. Muddiman nโ€‰, H. Daniels n, N. Hiramatsu*, B. Reading nโ€‰

co-author countries: Japan ๐Ÿ‡ฏ๐Ÿ‡ต United States of America ๐Ÿ‡บ๐Ÿ‡ธ

Contributors: J. Schilling n, A. Nepomuceno n, A. Planchart nโ€‰, J. Yoder nโ€‰, R. Kelly nโ€‰, D. Muddiman nโ€‰, H. Daniels n, N. Hiramatsu*, B. Reading nโ€‰

author keywords: Animal proteomics; Endocrine disrupting compounds; Machine learning; Plasma; Semiquantitative proteomics; Support vector machines
MeSH headings : Animals; Bass / metabolism; Blood Proteins / metabolism; Blotting, Western; Chromatography, Liquid; Estradiol / pharmacology; Estrogens / pharmacology; Female; Fish Proteins / metabolism; Kininogens / metabolism; Male; Nanotechnology / methods; Proteome / drug effects; Proteome / metabolism; Proteomics / methods; Sex Factors; Support Vector Machine; Tandem Mass Spectrometry; Vitellogenins / metabolism
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2015 review

The Confluence of Heavy Metal Biooxidation and Heavy Metal Resistance: Implications for Bioleaching by Extreme Thermoacidophiles

[Review of ]. MINERALS, 5(3), 397โ€“451.

By: G. Wheaton n, J. Counts n, A. Mukherjee n, J. Kruh n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: extreme thermoacidophiles; bioleaching; heavy metal resistance; heavy metal biooxidation; archaea
Sources: Web Of Science, ORCID
Added: August 6, 2018

2014 journal article

Conversion of 4-Hydroxybutyrate to Acetyl Coenzyme A and Its Anapleurosis in the Metallosphaera sedula 3-Hydroxypropionate/4-Hydroxybutyrate Carbon Fixation Pathway

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 80(8), 2536โ€“2545.

By: A. Hawkins n, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Acetyl Coenzyme A / metabolism; Carbon Cycle; Escherichia coli / genetics; Gene Expression Profiling; Metabolic Networks and Pathways / genetics; Recombinant Proteins / genetics; Recombinant Proteins / isolation & purification; Recombinant Proteins / metabolism; Sodium Oxybate / metabolism; Sulfolobaceae / metabolism; Transcriptome
Sources: Web Of Science, ORCID
Added: August 6, 2018

2014 journal article

Cross-linked Polymer Nanofibers for Hyperthermophilic Enzyme Immobilization: Approaches to Improve Enzyme Performance

ACS APPLIED MATERIALS & INTERFACES, 6(15), 11899โ€“11906.

By: C. Tang n, C. Saquing n, S. Morton n, B. Glatz n, R. Kelly nโ€‰ & S. Khan nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: enzyme immobilization; nanofibers; electrospinning; biocatalysts; mass transfer
MeSH headings : Catalysis; Cross-Linking Reagents / chemistry; Electrochemistry; Enzymes, Immobilized / chemistry; Escherichia coli / metabolism; Hydrogen-Ion Concentration; Kinetics; Microscopy, Electron, Scanning; Nanofibers / chemistry; Nanotechnology / methods; Polymers / chemistry; Polyvinyl Alcohol / chemistry; Solvents / chemistry; Temperature; Thermotoga maritima / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2014 journal article

Deletion of acetyl-CoA synthetases I and II increases production of 3-hydroxypropionate by the metabolically-engineered hyperthermophile Pyrococcus furiosus

METABOLIC ENGINEERING, 22, 83โ€“88.

By: M. Thorgersenโ€‰*, G. Lipscomb*, G. Schutโ€‰*, R. Kelly nโ€‰ & M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Electrofuels; Metallosphaera sedula; Acetyl-CoA synthetase; 3-Hydroxypropionate
MeSH headings : Archaeal Proteins; Coenzyme A Ligases; Gene Deletion; Lactic Acid / analogs & derivatives; Lactic Acid / metabolism; Metabolic Engineering / methods; Pyrococcus furiosus / genetics; Pyrococcus furiosus / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2014 journal article

Engineering Hydrogen Gas Production from Formate in a Hyperthermophile by Heterologous Production of an 18-Subunit Membrane-bound Complex

JOURNAL OF BIOLOGICAL CHEMISTRY, 289(5), 2873โ€“2879.

By: G. Lipscomb*, G. Schutโ€‰*, M. Thorgersenโ€‰*, W. Nixon*, R. Kelly nโ€‰ & M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Archaea; Enzymes; Genetics; Metabolic Engineering; Microbiology; Hydrogen; Hyperthermophiles
MeSH headings : Biofuels / microbiology; Formates / metabolism; Gases / metabolism; Genes, Bacterial / genetics; Hydrogen / metabolism; Membrane Proteins / genetics; Membrane Proteins / metabolism; Metabolic Engineering / methods; Multienzyme Complexes / genetics; Multienzyme Complexes / metabolism; Operon / genetics; Pyrococcus furiosus / enzymology; Pyrococcus furiosus / genetics; Thermococcus / enzymology; Thermococcus / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2014 journal article

Nanofibrous membranes for single-step immobilization of hyperthermophilic enzymes

JOURNAL OF MEMBRANE SCIENCE, 472, 251โ€“260.

By: C. Tang n, C. Saquing n, P. Sarin n, R. Kelly nโ€‰ & S. Khan nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Enzyme immobilization; Nanofibers; Electrospinning; Chemical crosslinking; Hyperthermophilic enzymes
Sources: Web Of Science, ORCID
Added: August 6, 2018

2014 journal article

Production of lignofuels and electrofuels by extremely thermophilic microbes

Biofuels, 5(5), 499โ€“515.

By: M. Kellerโ€‰*, A. Loder n, M. Basenโ€‰*, J. Izquierdo n, R. Kelly nโ€‰ & M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: extreme thermophiles; Pyrococcus furiosus; Metallosphaera sedula; Caldicellulosiruptor; biofuels; electrofuels; CO2 fixation; lignocellulose
Sources: Crossref, ORCID
Added: February 24, 2020

2014 journal article

Role of an Archaeal PitA Transporter in the Copper and Arsenic Resistance of Metallosphaera sedula, an Extreme Thermoacidophile

JOURNAL OF BACTERIOLOGY, 196(20), 3562โ€“3570.

By: S. McCarthy, C. Ai, G. Wheaton*, R. Tevatia, V. Eckrich, R. Kelly*โ€‰, P. Blum

MeSH headings : Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Arsenic / metabolism; Arsenic / toxicity; Biological Transport; Copper / metabolism; Copper / toxicity; Gene Expression Regulation, Archaeal / physiology; Genome, Archaeal; Molecular Sequence Data; Sulfolobaceae / drug effects; Sulfolobaceae / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2014 journal article

Single gene insertion drives bioalcohol production by a thermophilic archaeon

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 111(49), 17618โ€“17623.

By: M. Basenโ€‰*, G. Schutโ€‰*, D. Nguyenโ€‰*, G. Lipscomb*, R. Benn*, C. Prybol*, B. Vaccaro*, F. Poole*, R. Kelly nโ€‰, M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Archaea; metabolic engineering; hyperthermophile; carbon monoxide; aldehydes
MeSH headings : Acetates / chemistry; Aldehyde Oxidoreductases / genetics; Aldehyde Oxidoreductases / metabolism; Aldehydes / chemistry; Biofuels; Carbon Monoxide / chemistry; Escherichia coli / metabolism; Ethanol / chemistry; Fermentation; Maltose / chemistry; Mutagenesis, Insertional; Protein Engineering / methods; Pyrococcus furiosus / genetics; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018

2014 chapter

The Extremely Thermophilic Genus Caldicellulosiruptor: Physiological and Genomic Characteristics for Complex Carbohydrate Conversion to Molecular Hydrogen

In Microbial BioEnergy: Hydrogen Production (pp. 177โ€“195).

By: J. Zurawski n, S. Blumer-Schuetteโ€‰ n, J. Conway n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Crossref, ORCID
Added: July 21, 2021

2014 chapter

The Order Thermococcales and the Family Thermococcaceae

In The Prokaryotes (pp. 363โ€“383).

By: G. Schutโ€‰*, G. Lipscomb*, Y. Hanโ€‰ n, J. Notey n, R. Kelly nโ€‰ & M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Crossref, ORCID
Added: July 21, 2021

2014 review

Thermophilic lignocellulose deconstruction

[Review of ]. FEMS MICROBIOLOGY REVIEWS, 38(3), 393โ€“448.

co-author countries: Israel ๐Ÿ‡ฎ๐Ÿ‡ฑ United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: thermophilic microorganisms; cellulosome; lignocellulose deconstruction; carbohydrate-active enzymes; systems biology; bioenergy
MeSH headings : Biofuels; Cellulosomes / genetics; Cellulosomes / metabolism; Gram-Positive Endospore-Forming Bacteria / classification; Gram-Positive Endospore-Forming Bacteria / enzymology; Gram-Positive Endospore-Forming Bacteria / genetics; Hot Temperature; Lignin / metabolism; Molecular Sequence Data; Plants / metabolism; Soil Microbiology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2013 journal article

A thermophile under pressure: Transcriptional analysis of the response of Caldicellulosiruptor saccharolyticus to different H-2 partial pressures

INTERNATIONAL JOURNAL OF HYDROGEN ENERGY, 38(4), 1837โ€“1849.

By: A. Bielen*, M. Verhaart*, A. VanFossen n, S. Blumer-Schuette n, A. Stams*, J. Oostโ€‰*, R. Kelly nโ€‰, S. Kengenโ€‰*

co-author countries: Netherlands ๐Ÿ‡ณ๐Ÿ‡ฑ United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Caldicellulosiruptor saccharolyticus; Hydrogen partial pressure; Chemostat; Metabolic shift; Gene expression; Rex transcriptional regulator
Sources: Web Of Science, ORCID
Added: August 6, 2018

2013 review

Biological conversion of carbon dioxide and hydrogen into liquid fuels and industrial chemicals

[Review of ]. CURRENT OPINION IN BIOTECHNOLOGY, 24(3), 376โ€“384.

By: A. Hawkins n, P. McTernanโ€‰*, H. Lian n, R. Kelly nโ€‰ & M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Bioelectric Energy Sources; Biotechnology / methods; Carbon Cycle / genetics; Carbon Dioxide / metabolism; Chemical Industry; Hydrogen / metabolism; Metabolic Engineering / methods
Sources: Web Of Science, ORCID
Added: August 6, 2018

2013 journal article

Carbohydrate and lignin are simultaneously solubilized from unpretreated switchgrass by microbial action at high temperature

Energy & Environmental Science, 6(7), 2186.

By: I. Kataeva*, M. Fostonโ€‰*, S. Yangโ€‰*, S. Pattathilโ€‰*, A. Biswal*, F. Poole II, M. Basenโ€‰*, A. Rhaesa* ...

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Source: Crossref
Added: February 24, 2020

2013 journal article

Exploiting microbial hyperthermophilicity to produce an industrial chemical, using hydrogen and carbon dioxide

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 110(15), 5840โ€“5845.

By: M. Kellerโ€‰*, G. Schutโ€‰*, G. Lipscomb*, A. Menon*, I. Iwuchukwu*, T. Leuko*, M. Thorgersenโ€‰*, W. Nixon* ...

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: anaerobe; archaea; biotechnology; metabolic engineering; thermophile
MeSH headings : Carbohydrates / chemistry; Carbon Dioxide / chemistry; Gases; Genetic Engineering; Hydrogen / chemistry; Industrial Microbiology / methods; Lactic Acid / analogs & derivatives; Lactic Acid / biosynthesis; Lactic Acid / chemistry; Operon; Polymerase Chain Reaction; Pyrococcus furiosus / genetics; Pyrococcus furiosus / growth & development; Pyrococcus furiosus / metabolism; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018

2013 journal article

Role of 4-Hydroxybutyrate-CoA Synthetase in the CO2 Fixation Cycle in Thermoacidophilic Archaea

JOURNAL OF BIOLOGICAL CHEMISTRY, 288(6), 4012โ€“4022.

By: A. Hawkins n, Y. Han n, R. Bennett n, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Archaeal Proteins / chemistry; Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Carbon Dioxide / metabolism; Catalysis; Catalytic Domain; Coenzyme A-Transferases / chemistry; Coenzyme A-Transferases / genetics; Coenzyme A-Transferases / metabolism; Genome, Archaeal / physiology; Hydroxybutyrates / chemistry; Hydroxybutyrates / metabolism; Sulfolobaceae / enzymology; Sulfolobaceae / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2013 journal article

Stationary Phase and Nutrient Levels Trigger Transcription of a Genomic Locus Containing a Novel Peptide (TM1316) in the Hyperthermophilic Bacterium Thermotoga maritima

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 79(21), 6637โ€“6646.

By: A. Frock n, C. Montero n, S. Blumer-Schuette n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Carbon / metabolism; Gene Expression Regulation, Bacterial / genetics; Gene Expression Regulation, Bacterial / physiology; Genetic Loci / genetics; Microscopy, Fluorescence; Molecular Sequence Annotation / methods; Nitrogen / metabolism; Operon / genetics; Peptides / genetics; Thermotoga maritima / genetics; Thermotoga maritima / growth & development; Thermotoga maritima / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2012 journal article

Caldicellulosiruptor Core and Pangenomes Reveal Determinants for Noncellulosomal Thermophilic Deconstruction of Plant Biomass

JOURNAL OF BACTERIOLOGY, 194(15), 4015โ€“4028.

By: S. Blumer-Schuette n, R. Giannoneโ€‰*, J. Zurawski n, I. Ozdemir n, Q. Maโ€‰*, Y. Yinโ€‰*, Y. Xuโ€‰*, I. Kataeva* ...

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Adhesins, Bacterial / analysis; Adhesins, Bacterial / genetics; Biomass; Carbohydrate Metabolism; Cellulases / analysis; Cellulases / genetics; Cellulose / metabolism; Genetic Variation; Genome, Bacterial; Gram-Positive Bacteria / enzymology; Gram-Positive Bacteria / genetics; Metabolic Networks and Pathways / genetics; Plants / chemistry; Proteome / analysis
Sources: Web Of Science, ORCID
Added: August 6, 2018

2012 journal article

Epimerase (Msed_0639) and Mutase (Msed_0638 and Msed_2055) Convert (S)-Methylmalonyl-Coenzyme A (CoA) to Succinyl-CoA in the Metallosphaera sedula 3-Hydroxypropionate/4-Hydroxybutyrate Cycle

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 78(17), 6194โ€“6202.

By: Y. Han n, A. Hawkins n, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Acyl Coenzyme A / metabolism; Autotrophic Processes; Biotransformation; Carbon Dioxide / metabolism; Cobamides / metabolism; Escherichia coli / genetics; Gene Expression; Gene Expression Profiling; Heterotrophic Processes; Hydroxybutyrates / metabolism; Methylmalonyl-CoA Mutase / chemistry; Methylmalonyl-CoA Mutase / genetics; Methylmalonyl-CoA Mutase / metabolism; Protein Multimerization; Racemases and Epimerases / chemistry; Racemases and Epimerases / genetics; Racemases and Epimerases / metabolism; Recombinant Proteins / genetics; Recombinant Proteins / metabolism; Sulfolobaceae / enzymology; Sulfolobaceae / genetics; Sulfolobaceae / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2012 journal article

Extreme thermophiles: moving beyond single-enzyme biocatalysis

Current Opinion in Chemical Engineering, 1(4), 363โ€“372.

By: A. Frock n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Crossref, ORCID
Added: February 24, 2020

2012 journal article

Hyperthermophilic Thermotoga Species Differ with Respect to Specific Carbohydrate Transporters and Glycoside Hydrolases

Applied and Environmental Microbiology, 78(6), 1978โ€“1986.

By: A. Frock n, S. Grayโ€‰ n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : ATP-Binding Cassette Transporters / genetics; ATP-Binding Cassette Transporters / metabolism; Bacterial Typing Techniques; Carbohydrate Metabolism; Gene Expression Profiling; Glycoside Hydrolases / genetics; Glycoside Hydrolases / metabolism; Gram-Negative Anaerobic Straight, Curved, and Helical Rods / classification; Gram-Negative Anaerobic Straight, Curved, and Helical Rods / enzymology; Gram-Negative Anaerobic Straight, Curved, and Helical Rods / genetics; Gram-Negative Anaerobic Straight, Curved, and Helical Rods / metabolism; Microarray Analysis
Sources: Crossref, ORCID
Added: August 3, 2021

2012 journal article

S-Layer Homology Domain Proteins Csac_0678 and Csac_2722 Are Implicated in Plant Polysaccharide Deconstruction by the Extremely Thermophilic Bacterium Caldicellulosiruptor saccharolyticus

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 78(3), 768โ€“777.

By: I. Ozdemir n, S. Blumer-Schuette n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Enzyme Stability; Glycoside Hydrolases / chemistry; Glycoside Hydrolases / genetics; Glycoside Hydrolases / metabolism; Gram-Positive Bacteria / enzymology; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / metabolism; Hydrogen-Ion Concentration; Membrane Glycoproteins / chemistry; Membrane Glycoproteins / genetics; Membrane Glycoproteins / metabolism; Molecular Weight; Open Reading Frames; Plants / microbiology; Polysaccharides / metabolism; Protein Binding; Sequence Deletion; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018

2012 journal article

Uranium extremophily is an adaptive, rather than intrinsic, feature for extremely thermoacidophilic Metallosphaera species

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 109(41), 16702โ€“16707.

By: A. Mukherjee n, G. Wheaton n, P. Blum* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: uranium oxidation; uranium resistance; chemolithotrophy; terminal oxidases
MeSH headings : Adaptation, Physiological / drug effects; Adaptation, Physiological / genetics; Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Electrophoresis, Gel, Two-Dimensional; Environmental Pollutants / chemistry; Environmental Pollutants / toxicity; Gene Expression Regulation, Archaeal / drug effects; Mutation; RNA Stability / drug effects; RNA, Archaeal / genetics; RNA, Archaeal / metabolism; Species Specificity; Sulfolobaceae / classification; Sulfolobaceae / genetics; Sulfolobaceae / metabolism; Time Factors; Transcriptome / genetics; Uranium / chemistry; Uranium / toxicity
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

A novel alpha-d-galactosynthase from Thermotoga maritima converts beta-d-galactopyranosyl azide to alpha-galacto-oligosaccharides

GLYCOBIOLOGY, 21(4), 448โ€“456.

co-author countries: Italy ๐Ÿ‡ฎ๐Ÿ‡น United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: alpha-galacto-oligosaccharides; glycosynthase; alpha-gal epitope; carbohydrate synthesis; protein engineering
MeSH headings : Aspartic Acid / chemistry; Azides / chemistry; Chromatography, Thin Layer; Disaccharides / biosynthesis; Galactose / metabolism; Glycine / chemistry; Kinetics; Mutagenesis, Site-Directed; Mutant Proteins / chemistry; Mutant Proteins / genetics; Mutant Proteins / metabolism; Protein Engineering; Thermotoga maritima / enzymology; alpha-Galactosidase / chemistry; alpha-Galactosidase / genetics; alpha-Galactosidase / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Complete Genome Sequences for the Anaerobic, Extremely Thermophilic Plant Biomass-Degrading Bacteria Caldicellulosiruptor hydrothermalis , Caldicellulosiruptor kristjanssonii , Caldicellulosiruptor kronotskyensis , Caldicellulosiruptor owensensis , and Caldicellulosiruptor lactoaceticus

Journal of Bacteriology, 193(6), 1483โ€“1484.

By: S. Blumer-Schuetteโ€‰ n, I. Ozdemir n, D. Mistry n, S. Lucas*, A. Lapidusโ€‰*, J. Chengโ€‰*, L. Goodwinโ€‰*, S. Pitluck* ...

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : DNA, Bacterial / chemistry; DNA, Bacterial / genetics; Genetic Variation; Genome, Bacterial; Glycoside Hydrolases / genetics; Gram-Positive Bacteria / genetics; Membrane Transport Proteins / genetics; Molecular Sequence Data; Sequence Analysis, DNA
Sources: Crossref, ORCID
Added: July 21, 2021

2011 journal article

Extremely Thermophilic Routes to Microbial Electrofuels

ACS CATALYSIS, 1(9), 1043โ€“1050.

By: A. Hawkins n, Y. Han n, H. Lian n, A. Loder n, A. Menon*, I. Iwuchukwu*, M. Kellerโ€‰*, T. Leuko*, M. Adamsโ€‰*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Glycoside Hydrolase Inventory Drives Plant Polysaccharide Deconstruction by the Extremely Thermophilic Bacterium Caldicellulosiruptor saccharolyticus

BIOTECHNOLOGY AND BIOENGINEERING, 108(7), 1559โ€“1569.

By: A. VanFossen n, I. Ozdemir n, S. Zelin n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Caldicellulosiruptor saccharolyticus; extreme thermophile; plant biomass; glycoside hydrolases
MeSH headings : Bacterial Proteins / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Carboxymethylcellulose Sodium / metabolism; Culture Media / chemistry; Gene Expression Profiling; Glycoside Hydrolases / chemistry; Glycoside Hydrolases / genetics; Glycoside Hydrolases / metabolism; Gram-Positive Bacteria / enzymology; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / metabolism; Molecular Weight; Plants / chemistry; Polysaccharides / metabolism; Xylans / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Insights into plant biomass conversion from the genome of the anaerobic thermophilic bacterium Caldicellulosiruptor bescii DSM 6725

NUCLEIC ACIDS RESEARCH, 39(8), 3240โ€“3254.

By: P. Dam n, I. Kataeva n, S. Yangโ€‰ n, F. Zhouโ€‰ n, Y. Yinโ€‰ n, W. Chou n, F. Poole n, J. Westpheling n ...

co-author countries: France ๐Ÿ‡ซ๐Ÿ‡ท United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Bacterial Adhesion; Bacterial Proteins / genetics; Biomass; Carbohydrate Metabolism / genetics; Gene Expression Profiling; Genes, Bacterial; Genome, Bacterial; Genomics; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / metabolism; Gram-Positive Bacteria / ultrastructure; Plants / metabolism; Proteomics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Starch Self-Processing in Transgenic Sweet Potato Roots Expressing a Hyperthermophilic alpha-Amylase

BIOTECHNOLOGY PROGRESS, 27(2), 351โ€“359.

By: M. Santa-Maria n, C. Yencho nโ€‰, C. Haigler nโ€‰, W. Thompson nโ€‰, R. Kelly nโ€‰ & B. Sosinski n

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: hyperthermophilic enzymes; starch conversion; transgenic plants; sweet potato; biofuels
MeSH headings : Crops, Agricultural / genetics; Hot Temperature; Ipomoea batatas / genetics; Ipomoea batatas / metabolism; Plant Roots / metabolism; Plants, Genetically Modified / enzymology; Plants, Genetically Modified / metabolism; Southeastern United States; Starch / metabolism; Thermotoga maritima / enzymology; alpha-Amylases / genetics; alpha-Amylases / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

VapC6, a ribonucleolytic toxin regulates thermophilicity in the crenarchaeote Sulfolobus solfataricus

RNA, 17(7), 1381โ€“1392.

By: Y. Maezato, A. Daugherty, K. Dana, E. Soo, C. Cooper, S. Tachdjian, R. Kelly*โ€‰, P. Blum

author keywords: antitoxin; RNA degradation; heat shock; archaea; transcription
MeSH headings : Adaptation, Physiological / genetics; Adaptation, Physiological / physiology; Cell Line; Gene Expression Profiling; Gene Expression Regulation, Archaeal; Hydrolysis / drug effects; Models, Biological; RNA / drug effects; RNA / metabolism; Sulfolobus solfataricus / genetics; Sulfolobus solfataricus / metabolism; Sulfolobus solfataricus / physiology; Temperature; Toxins, Biological / genetics; Toxins, Biological / metabolism; Toxins, Biological / pharmacology; Toxins, Biological / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2010 chapter

Enzymes, Extremely Thermophilic

In M. C. Flickinger (Ed.), Encyclopedia of Industrial Biotechnology.

By: J. Harris n, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ

Ed(s): M. Flickinger

Sources: Crossref, ORCID
Added: August 3, 2021

2010 chapter

Extremely thermophilic microorganisms

In M. C. Flickinger (Ed.), Encyclopedia of Industrial Biotechnology: Bioprocess, Bioseparation, and Cell Technology (2nd ed., Vol. 5, pp. 3481โ€“3499). NY: John Wiley and Sons.

By: S. Gray, M. Adams & R. Kellyโ€‰

Ed(s): M. Flickinger

Source: NC State University Libraries
Added: August 27, 2021

2010 entry reference

Extremophiles

(I. T. Horvรกth, Ed.).

By: I. Ozdemir n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ

Ed(s): I. Horvรกth

Sources: Crossref, ORCID, NC State University Libraries
Added: July 14, 2021

2010 journal article

Impact of Molecular Hydrogen on Chalcopyrite Bioleaching by the Extremely Thermoacidophilic Archaeon Metallosphaera sedula

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 76(8), 2668โ€“2672.

By: K. Auernik n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Archaeal Proteins / biosynthesis; Copper / metabolism; Electron Transport Chain Complex Proteins / biosynthesis; Gene Expression Profiling; Hydrogen / metabolism; Sulfolobaceae / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2010 journal article

N-terminal Fusion of a Hyperthermophilic Chitin-Binding Domain to Xylose Isomerase from Thermotoga neapolitana Enhances Kinetics and Thermostability of Both Free and Immobilized Enzymes

BIOTECHNOLOGY PROGRESS, 26(4), 993โ€“1000.

By: J. Harris n, K. Epting n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: xylose isomerase; hyperthermophile; Thermotoga neapolitana; chitin-binding domain
MeSH headings : Aldose-Ketose Isomerases / genetics; Aldose-Ketose Isomerases / metabolism; Chitin / metabolism; Enzyme Stability; Enzymes, Immobilized / genetics; Enzymes, Immobilized / metabolism; Kinetics; Protein Binding; Protein Structure, Tertiary / genetics; Protein Structure, Tertiary / physiology; Recombinant Proteins / genetics; Recombinant Proteins / metabolism; Thermotoga neapolitana / enzymology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2010 journal article

Part I: characterization of the extracellular proteome of the extreme thermophile Caldicellulosiruptor saccharolyticus by GeLC-MS2

ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 398(1), 377โ€“389.

By: D. Muddiman nโ€‰, G. Andrews n, D. Lewis n, J. Notey n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Secretome; Caldicellulosiruptor saccharolyticus; GeLC-MS2; Thermophile; Sample preparation
MeSH headings : Bacterial Proteins / analysis; Bacterial Proteins / metabolism; Chromatography, Liquid; Electrophoresis, Polyacrylamide Gel; Extracellular Space / metabolism; Gram-Positive Bacteria / metabolism; Proteome / analysis; Spectrometry, Mass, Electrospray Ionization; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018

2010 article

Part I: characterization of the extracellular proteome of the extreme thermophile Caldicellulosiruptor saccharolyticus by GeLC-MS2 (vol 398, pg 377, 2010)

Andrews, G., Lewis, D., Notey, J., Kelly, R., & Muddiman, D. (2010, October). ANALYTICAL AND BIOANALYTICAL CHEMISTRY, Vol. 398, pp. 1837โ€“1837.

By: G. Andrews n, D. Lewis n, J. Notey n, R. Kelly nโ€‰ & D. Muddiman nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Web Of Science, ORCID
Added: August 6, 2018

2010 journal article

Part II: defining and quantifying individual and co-cultured intracellular proteomes of two thermophilic microorganisms by GeLC-MS2 and spectral counting

ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 398(1), 391โ€“404.

By: D. Muddiman nโ€‰, G. Andrews n, D. Lewis n, J. Notey n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Thermotoga maritima; Caldicellulosiruptor saccharolyticus; GeLC-MS2; Co-cultivation; Intracellular proteome; Spectral counting
MeSH headings : Bacterial Proteins / analysis; Bacterial Proteins / metabolism; Chemotaxis; Chromatography, Liquid; Coculture Techniques; Electrophoresis, Polyacrylamide Gel; Fourier Analysis; Gram-Positive Bacteria / growth & development; Gram-Positive Bacteria / metabolism; Intracellular Space / metabolism; Proteome / analysis; Spectrometry, Mass, Electrospray Ionization; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Spectrum Analysis / statistics & numerical data; Temperature; Thermotoga maritima / growth & development; Thermotoga maritima / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2010 article

Part II: defining and quantifying individual and co-cultured intracellular proteomes of two thermophilic microorganisms by GeLC-MS2 and spectral counting (vol 398, pg 391, 2010)

Andrews, G., Lewis, D., Notey, J., Kelly, R., & Muddiman, D. (2010, October). ANALYTICAL AND BIOANALYTICAL CHEMISTRY, Vol. 398, pp. 1839โ€“1839.

By: G. Andrews n, D. Lewis n, J. Notey n, R. Kelly nโ€‰ & D. Muddiman nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Web Of Science, ORCID
Added: August 6, 2018

2010 journal article

Phylogenetic, Microbiological, and Glycoside Hydrolase Diversities within the Extremely Thermophilic, Plant Biomass-Degrading Genus Caldicellulosiruptor

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 76(24), 8084โ€“8092.

By: S. Blumer-Schuette n, D. Lewis n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Bacterial Proteins / analysis; Biomass; Carbohydrate Metabolism; Cluster Analysis; DNA, Bacterial / chemistry; DNA, Bacterial / genetics; DNA, Ribosomal / chemistry; DNA, Ribosomal / genetics; Electrophoresis, Gel, Two-Dimensional; Genetic Variation; Glycoside Hydrolases / genetics; Gram-Positive Bacteria / classification; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / growth & development; Gram-Positive Bacteria / metabolism; Hot Temperature; Microarray Analysis; Molecular Sequence Data; Nucleic Acid Hybridization; Phylogeny; Plants / microbiology; Proteome / analysis; RNA, Ribosomal, 16S / genetics; Sequence Analysis, DNA
Sources: Web Of Science, ORCID
Added: August 6, 2018

2010 journal article

Physiological Versatility of the Extremely Thermoacidophilic Archaeon Metallosphaera sedula Supported by Transcriptomic Analysis of Heterotrophic, Autotrophic, and Mixotrophic Growth

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 76(3), 931โ€“935.

By: K. Auernik n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Aerobiosis / genetics; Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Autotrophic Processes; Carbon Dioxide / metabolism; Carbon Isotopes; Gene Expression Profiling; Gene Expression Regulation, Archaeal; Heterotrophic Processes; Hot Temperature; Hydroxybutyrates / metabolism; Oligonucleotide Array Sequence Analysis; Substrate Specificity / genetics; Sulfolobaceae / genetics; Sulfolobaceae / growth & development; Sulfolobaceae / metabolism; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018

2010 journal article

The genus Thermotoga: recent developments

ENVIRONMENTAL TECHNOLOGY, 31(10), 1169โ€“1181.

By: A. Frock n, J. Notey n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Thermotoga; extreme thermophiles; genomics; microbial physiology
MeSH headings : Biofilms; Carbohydrate Metabolism / genetics; Genome, Bacterial; Genomics; RNA, Ribosomal, 16S / genetics; Thermotoga maritima / enzymology; Thermotoga maritima / genetics; Thermotoga maritima / metabolism; Thermotoga maritima / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2009 journal article

Carbohydrate Utilization Patterns for the Extremely Thermophilic Bacterium Caldicellulosiruptor saccharolyticus Reveal Broad Growth Substrate Preferences

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 75(24), 7718โ€“7724.

By: A. VanFossen n, M. Verhaart*, S. Kengenโ€‰* & R. Kelly nโ€‰

co-author countries: Netherlands ๐Ÿ‡ณ๐Ÿ‡ฑ United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : ATP-Binding Cassette Transporters / genetics; ATP-Binding Cassette Transporters / metabolism; Biofuels; Biological Transport; Carbohydrate Metabolism; Gene Expression Profiling; Genes, Bacterial; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / growth & development; Lignin / metabolism; Monosaccharides / metabolism; Oligonucleotide Array Sequence Analysis
Sources: Web Of Science, ORCID
Added: August 6, 2018

2009 journal article

Integrating modern biology into the ChE DNA through a campus-wide core laboratory education program

Chemical Engineering Education, 43(4), 257โ€“264.

By: S. Carson, J. Chisnell & R. Kellyโ€‰

Source: NC State University Libraries
Added: September 6, 2021

2009 journal article

Plant cell calcium-rich environment enhances thermostability of recombinantly produced ฮฑ-amylase from the hyperthermophilic bacterium Thermotoga maritime

Biotechnology and Bioengineering, 104(5), 947โ€“956.

By: M. Santa-Maria n, C. Chou n, G. Yenchoโ€‰ n, C. Haigler nโ€‰, W. Thompson nโ€‰, R. Kelly nโ€‰, B. Sosinski n

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: hyperthermophilic enzymes; starch processing; transgenic plants; tobacco NT1 Cell cultures; biofuel
MeSH headings : Calcium / pharmacology; Coenzymes / pharmacology; Enzyme Stability; Escherichia coli / enzymology; Escherichia coli / genetics; Hot Temperature; Plants, Genetically Modified / enzymology; Recombinant Proteins / chemistry; Recombinant Proteins / genetics; Recombinant Proteins / metabolism; Thermotoga maritima / enzymology; Thermotoga maritima / genetics; Tobacco / enzymology; Tobacco / genetics; alpha-Amylases / chemistry; alpha-Amylases / genetics; alpha-Amylases / metabolism
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2009 journal article

Role of vapBC toxinโ€“antitoxin loci in the thermal stress response of Sulfolobus solfataricus

Biochemical Society Transactions, 37(1), 123โ€“126.

By: C. Cooperโ€‰ n, A. Daugherty*, S. Tachdjian n, P. Blum* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: archaeon; heat shock; hyperthermophile; stress response; Sulfolobus solfataricus; toxin-antioxin locus
MeSH headings : Antitoxins / metabolism; Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Genome, Archaeal / genetics; Heat-Shock Response; Stress, Physiological; Sulfolobus solfataricus / genetics; Sulfolobus solfataricus / metabolism; Temperature; Toxins, Biological / genetics; Toxins, Biological / metabolism
Sources: Crossref, ORCID
Added: August 28, 2020

2009 journal article

Temperature, not LuxS, mediates AI-2 formation in hydrothermal habitats

FEMS MICROBIOLOGY ECOLOGY, 68(2), 173โ€“181.

By: J. Nichols n, M. Johnson n, C. Chou n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: autoinducer-2; AI-2; hyperthermophiles; hydrothermal environments; Thermotoga maritima; Pyrococcus furiosus
MeSH headings : Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Carbon-Sulfur Lyases / genetics; Carbon-Sulfur Lyases / metabolism; Gas Chromatography-Mass Spectrometry; Gene Expression Regulation, Bacterial; Homoserine / analogs & derivatives; Homoserine / biosynthesis; Hot Temperature; Lactones; Pyrococcus furiosus / genetics; Pyrococcus furiosus / metabolism; Quorum Sensing; Thermotoga maritima / genetics; Thermotoga maritima / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 review

Extremely thermophilic microorganisms for biomass conversion: status and prospects

[Review of ]. CURRENT OPINION IN BIOTECHNOLOGY, 19(3), 210โ€“217.

By: S. Blumer-Schuette n, I. Kataeva*, J. Westpheling*, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Archaea / classification; Archaea / genetics; Archaea / metabolism; Bacteria / classification; Bacteria / genetics; Bacteria / metabolism; Bioelectric Energy Sources; Biomass; Biotechnology / trends; Carbohydrate Metabolism; Cellulase / metabolism; Cellulose / metabolism; Energy-Generating Resources; Hot Temperature; Marine Biology; Phylogeny
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 chapter

Functional Genomics of Stress Response in Extremophilic Archaea

In P. Blum (Ed.), Archaea: New Models for Prokaryotic Biology. Norfolk, UK: Caister Academic Press.

By: S. Tachdjian, K. Shockley, S. Conners & R. Kellyโ€‰

Ed(s): P. Blum

Source: NC State University Libraries
Added: September 9, 2021

2008 journal article

Functional-genomics-based identification and characterization of open reading frames encoding alpha-glucoside-processing enzymes in the hyperthermophilic archaeon Pyrococcus furiosus

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 74(4), 1281โ€“1283.

By: D. Comfort n, C. Chou n, S. Conners n, A. VanFossen n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Computational Biology; Gene Expression Regulation, Bacterial / genetics; Genomics / methods; Open Reading Frames / genetics; Pyrococcus furiosus / enzymology; Pyrococcus furiosus / genetics; alpha-Glucosidases / genetics; beta-Amylase / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 review

Hydrogenesis in hyperthermophilic microorganisms: Implications for biofuels

[Review of ]. METABOLIC ENGINEERING, 10(6), 394โ€“404.

By: C. Chou n, F. Jenney*, M. Adamsโ€‰* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Biohydrogen; Pyrococcus furiosus; Thermotoga maritima; Caldicellulosiruptor saccharolyticus; Hyperthermophiles; Hydrogenases
MeSH headings : Archaea / metabolism; Bioelectric Energy Sources; Hot Temperature; Hydrogen / metabolism; Hydrogen Sulfide / metabolism; Methane / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 journal article

Hydrogenomics of the Extremely Thermophilic Bacterium Caldicellulosiruptor saccharolyticus

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 74(21), 6720โ€“6729.

By: H. Werkenโ€‰*, M. Verhaart*, A. VanFossen n, K. Willquist*, D. Lewis n, J. Nichols n, H. Goorissen*, E. Mongodin* ...

co-author countries: Netherlands ๐Ÿ‡ณ๐Ÿ‡ฑ Sweden ๐Ÿ‡ธ๐Ÿ‡ช United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Bacterial Proteins / genetics; Carbohydrate Metabolism / genetics; DNA, Bacterial / chemistry; DNA, Bacterial / genetics; Enzymes / genetics; Gene Expression Profiling; Genome, Bacterial; Gram-Positive Bacteria / genetics; Metabolic Networks and Pathways / genetics; Molecular Sequence Data; Sequence Analysis, DNA
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 journal article

Identification of Components of Electron Transport Chains in the Extremely Thermoacidophilic Crenarchaeon Metallosphaera sedula through Iron and Sulfur Compound Oxidation Transcriptomes

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 74(24), 7723โ€“7732.

By: K. Auernik n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Archaeal Proteins / biosynthesis; Archaeal Proteins / genetics; Electron Transport Chain Complex Proteins / biosynthesis; Electron Transport Chain Complex Proteins / genetics; Ferrous Compounds / metabolism; Gene Expression Profiling; Genes, Archaeal; Iron-Sulfur Proteins / biosynthesis; Iron-Sulfur Proteins / genetics; Multigene Family; Oxidation-Reduction; Oxidoreductases / biosynthesis; Oxidoreductases / genetics; Sulfolobaceae / enzymology; Sulfolobaceae / genetics; Sulfolobaceae / metabolism; Sulfur / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 review

Life in hot acid: Pathway analyses in extremely thermoacidophilic archaea

[Review of ]. CURRENT OPINION IN BIOTECHNOLOGY, 19(5), 445โ€“453.

By: K. Auernik n, C. Cooperโ€‰ n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Acids / metabolism; Archaea / physiology; Archaeal Proteins / metabolism; Cell Survival; Ecosystem; Hot Temperature; Hydrogen-Ion Concentration; Models, Biological; Signal Transduction / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 journal article

Microwave activation of enzymatic catalysis

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 130(31), 10048-+.

By: D. Young n, J. Nichols n, R. Kelly nโ€‰ & A. Deiters n

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Carboxylesterase / metabolism; Catalysis; Enzymes / metabolism; Hot Temperature; Kinetics; Microwaves; Pyrococcus furiosus / enzymology; Sulfolobus solfataricus / enzymology; Thermotoga maritima / enzymology; alpha-Galactosidase / metabolism; beta-Glucosidase / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 journal article

Polysaccharide Degradation and Synthesis by Extremely Thermophilic Anaerobes

Annals of the New York Academy of Sciences, 1125(1), 322โ€“337.

By: A. VanFossen n, D. Lewis n, J. Nichols n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Pyrococcus furiosus; Thermotoga maritima; Caldicellulosiruptor saccharolyticus; extremely thermophilic organism; thermophile; glycoside hydrolases; exopolysaccharides
MeSH headings : Anaerobiosis; Archaeal Proteins / metabolism; Bacterial Proteins / metabolism; Biological Transport; Carbohydrate Metabolism; Glycoside Hydrolases / metabolism; Hot Temperature; Polysaccharides / biosynthesis; Polysaccharides / metabolism; Pyrococcus furiosus / growth & development; Pyrococcus furiosus / metabolism; Thermotoga maritima / growth & development; Thermotoga maritima / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 journal article

Probing the stability of native and activated forms of alpha(2)-macroglobulin

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 42(1), 62โ€“67.

By: S. Kaczowka*, L. Madding*, K. Epting n, R. Kelly nโ€‰, G. Cianciolo* & S. Pizzoโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: alpha M-2; alpha(2)-macroglobulin; alpha(2)-macroglobulin and proteinase incorporation; alpha(2)-macroglobulin and norproteolytic incorporation of lysozyme; alpha(2)-macroglobulin stabilization
MeSH headings : Amino Acid Sequence; Animals; Hot Temperature; Humans; Ligands; Molecular Sequence Data; Peptide Hydrolases / chemistry; Protein Conformation; Transition Temperature; alpha-Macroglobulins / chemistry
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 journal article

The genome sequence of the metal-mobilizing, extremely thermoacidophilic archaeon Metallosphaera sedula provides insights into bioleaching-associated metabolism

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 74(3), 682โ€“692.

By: K. Auernik n, Y. Maezato*, P. Blum* & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Amino Acid Sequence; Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Gene Expression Regulation, Archaeal; Genome, Archaeal; Hot Temperature; Iron / metabolism; Molecular Sequence Data; Oligonucleotide Array Sequence Analysis; Oxidation-Reduction; Sequence Analysis, DNA; Sulfates / metabolism; Sulfolobaceae / classification; Sulfolobaceae / genetics; Sulfolobaceae / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2007 chapter

Archaeal 20S Proteasome: A Simple and Thermostable Model System for the Core Particle

In F. Robb, G. Antranikian, D. Grogan, & A. Driessen (Eds.), Thermophiles (pp. 347โ€“360).

By: J. Michel & R. Kelly*โ€‰

Ed(s): F. Robb, G. Antranikian, D. Grogan & A. Driessen

Sources: Crossref, ORCID
Added: August 3, 2021

2007 journal article

Biochemical analysis of Thermotoga maritima GH36 alpha-galactosidase (TmGalA) confirms the mechanistic commonality of clan GH-D glycoside hydrolases

BIOCHEMISTRY, 46(11), 3319โ€“3330.

By: D. Comfort n, K. Bobrov n, D. Ivanen n, K. Shabalin n, J. Harris n, A. Kulminskayaโ€‰ n, H. Brumerโ€‰ n, R. Kelly nโ€‰

co-author countries: Russian Federation ๐Ÿ‡ท๐Ÿ‡บ Sweden ๐Ÿ‡ธ๐Ÿ‡ช United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Amino Acid Sequence; Azides / pharmacology; Catalysis; Cloning, Molecular; Hot Temperature; Hydrogen-Ion Concentration; Kinetics; Models, Molecular; Molecular Sequence Data; Mutagenesis, Site-Directed; Protein Denaturation; Sequence Alignment; Substrate Specificity; Thermotoga maritima / enzymology; Thermotoga maritima / genetics; alpha-Galactosidase / drug effects; alpha-Galactosidase / genetics; alpha-Galactosidase / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2007 chapter

Biochemical/Biomolecular engineering

In McGraw-Hill encyclopedia of science & technology (10th ed.). New York: McGraw-Hill.

By: J. Haugh & R. Kellyโ€‰

Source: NC State University Libraries
Added: September 9, 2021

2007 chapter

Functional Genomics

In R. Cavicchioli (Ed.), Archaea: Molecular and Cellular Biology (pp. 434โ€“462).

By: F. Jenney*, S. Tachdijan, C. Chou n, R. Kelly nโ€‰ & M. Adamsโ€‰*

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ

Ed(s): R. Cavicchioli

Sources: NC State University Libraries, ORCID
Added: July 27, 2021

2007 journal article

Impact of substrate glycoside linkage. and elemental sulfur on bioenergetics, of and hydrogen production by the hyperthermophilic Archaeon Pyrococcus furiosus

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 73(21), 6842โ€“6853.

By: C. Chou n, K. Shockley n, S. Conners n, D. Lewis n, D. Comfort n, M. Adamsโ€‰*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Archaea; Chemical Phenomena; Chemistry; Gene Expression Regulation, Archaeal; Genome, Archaeal; Glycosides / metabolism; Hot Temperature; Hydrogen / metabolism; Oligonucleotide Array Sequence Analysis; Open Reading Frames; Pyrococcus furiosus / enzymology; Pyrococcus furiosus / genetics; Pyrococcus furiosus / physiology; Sulfur / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2007 journal article

Responses of wild-type and resistant strains of the hyperthermophilic bacterium Thermotoga maritima to chloramphenicol challenge

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 73(15), 5058โ€“5065.

By: C. Montero n, M. Johnsonโ€‰ n, C. Chou n, S. Conners n, S. Geouge n, S. Tachdjian n, J. Nichols n, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Anti-Bacterial Agents / pharmacology; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Base Sequence; Chloramphenicol / pharmacology; Drug Resistance, Bacterial / genetics; Gene Expression Profiling; Gene Expression Regulation, Bacterial; Hot Temperature; Microbial Sensitivity Tests; Molecular Sequence Data; Oligonucleotide Array Sequence Analysis; Point Mutation; Proteome; RNA, Ribosomal, 23S / genetics; Thermotoga maritima / drug effects; Thermotoga maritima / genetics; Thermotoga maritima / growth & development; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018

2007 journal article

Rheological properties of guar galactomannan solutions during hydrolysis with galactomannanase and alpha-galactosidase enzyme mixtures

BIOMACROMOLECULES, 8(3), 949โ€“956.

By: S. Mahammad n, D. Comfort n, R. Kelly nโ€‰ & S. Khan nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Carbohydrate Conformation; Galactans / metabolism; Galactose / analogs & derivatives; Hydrogen-Ion Concentration; Hydrolysis; Kinetics; Mannans / chemistry; Mannans / metabolism; Mannose / chemistry; Mannosidases / chemistry; Models, Chemical; Models, Statistical; Plant Gums / metabolism; Polysaccharides / chemistry; Rheology / methods; Time Factors; alpha-Galactosidase / chemistry
Sources: Web Of Science, ORCID
Added: August 6, 2018

2007 journal article

Role of the beta 1 subunit in the function and stability of the 20S proteasome in the hyperthermophilic archaeon Pyrococcus furiosus

JOURNAL OF BACTERIOLOGY, 189(2), 583โ€“590.

By: L. Madding n, J. Michel n, K. Shockley n, S. Conners n, K. Epting n, M. Johnson n, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Archaeal Proteins / physiology; Calorimetry, Differential Scanning; Genome, Archaeal; Hot Temperature; Molecular Chaperones / genetics; Molecular Chaperones / metabolism; Proteasome Endopeptidase Complex / genetics; Proteasome Endopeptidase Complex / metabolism; Proteasome Endopeptidase Complex / physiology; Protein Subunits / genetics; Protein Subunits / metabolism; Protein Subunits / physiology; Pyrococcus furiosus / genetics; Pyrococcus furiosus / metabolism; Temperature; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018

2007 chapter

Transcriptomics, Proteomics, and Structural Genomics ofPyrococcus Furiosus

In Archaea (pp. 239โ€“246).

By: M. Adams, F. Jenney, C. Chou, S. Hamilton-Brehm, F. Poole, K. Shockley, S. Tachdjian, R. Kelly*โ€‰

Sources: Crossref, ORCID
Added: July 21, 2021

2006 journal article

Colocation of genes encoding a tRNA-mRNA hybrid and a putative signaling peptide on complementary strands in the genome of the hyperthermophilic bacterium Thermotoga maritima

JOURNAL OF BACTERIOLOGY, 188(19), 6802โ€“6807.

By: C. Montero n, D. Lewis n, M. Johnson n, S. Conners n, E. Nance n, J. Nichols n, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Amino Acid Sequence; Anti-Bacterial Agents / pharmacology; Chloramphenicol / pharmacology; Coculture Techniques; DNA, Bacterial / genetics; Gene Expression; Gene Expression Regulation, Bacterial; Genes, Bacterial; Genome, Bacterial; Intracellular Signaling Peptides and Proteins / genetics; Methanococcus; RNA, Bacterial / analysis; RNA, Bacterial / genetics; RNA, Messenger / analysis; RNA, Messenger / genetics; Reverse Transcriptase Polymerase Chain Reaction; Sequence Alignment; Synteny; Thermotoga maritima / genetics; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018

2006 journal article

Dynamic metabolic adjustments and genome plasticity are implicated in the heat shock response of the extremely thermoacidophilic Archaeon Sulfolobus solfataricus

JOURNAL OF BACTERIOLOGY, 188(12), 4553โ€“4559.

By: S. Tachdjian n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Antitoxins / genetics; Antitoxins / metabolism; Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Heat-Shock Response; Hot Temperature; Hydrogen-Ion Concentration; RNA, Archaeal / genetics; RNA, Messenger / genetics; Sulfolobus solfataricus / metabolism; Sulfolobus solfataricus / physiology; Time Factors; Toxins, Biological / genetics; Toxins, Biological / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2006 journal article

Global analysis of carbohydrate utilization by Lactobacillus acidophilus using cDNA microarrays

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103(10), 3816โ€“3821.

By: R. Barrangou*โ€‰, M. Azcarate-Peril*, T. Duong*, S. Conners n, R. Kelly nโ€‰ & T. Klaenhammer*

co-author countries: United Kingdom of Great Britain and Northern Ireland ๐Ÿ‡ฌ๐Ÿ‡ง Italy ๐Ÿ‡ฎ๐Ÿ‡น United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: ATP-binding cassette; carbon catabolite repression; fructooligosaccharide; galactoside-pentose hexuronide
MeSH headings : ATP-Binding Cassette Transporters / genetics; ATP-Binding Cassette Transporters / metabolism; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Carbohydrate Metabolism / genetics; Gastrointestinal Tract / microbiology; Gene Expression Profiling; Genes, Bacterial; Humans; Lactobacillus acidophilus / genetics; Lactobacillus acidophilus / metabolism; Models, Biological; Oligonucleotide Array Sequence Analysis; Phosphoenolpyruvate Sugar Phosphotransferase System / genetics; Reverse Transcriptase Polymerase Chain Reaction
Sources: Web Of Science, ORCID
Added: August 6, 2018

2006 journal article

Identification of Eggshell Membrane Proteins and Purification of Ovotransferrin and ฮฒ-NAGase from Hen Egg White

The Protein Journal, 25(1), 71โ€“81.

By: G. Ahlborn n, D. Clare n, B. Sheldon n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: beta-N-acetylglucosaminidase; ovotransferrin; isoelectric focusing; SDS-PAGE; eggshell membrane; hen egg white
MeSH headings : Acetylglucosaminidase / analysis; Acetylglucosaminidase / isolation & purification; Animals; Anti-Bacterial Agents / analysis; Chickens; Chromatography, Ion Exchange; Conalbumin / analysis; Conalbumin / isolation & purification; Egg Proteins / chemistry; Electrophoresis, Polyacrylamide Gel; Isoelectric Focusing; Membrane Proteins / chemistry; Muramidase / analysis; Ovum / chemistry; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2006 review

Microbial biochemistry, physiology, and biotechnology of hyperthermophilic Thermotoga species

[Review of ]. FEMS MICROBIOLOGY REVIEWS, 30(6), 872โ€“905.

By: S. Conners n, E. Mongodin, M. Johnson n, C. Montero n, K. Nelson & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: Thermotoga; hyperthermophiles; functional genomics
MeSH headings : Bacterial Proteins / chemistry; Bacterial Proteins / metabolism; Bacterial Proteins / physiology; Biotechnology; Carbohydrate Metabolism; Genetic Variation; Genome, Bacterial; Genomics; Gram-Negative Anaerobic Straight, Curved, and Helical Rods / genetics; Gram-Negative Anaerobic Straight, Curved, and Helical Rods / physiology; Hot Temperature; Iron / metabolism; Monosaccharides / biosynthesis; Phylogeny; Polysaccharides / biosynthesis; Signal Transduction; Sulfur / metabolism; Thermotoga maritima / genetics; Thermotoga maritima / isolation & purification; Thermotoga maritima / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2006 journal article

The Thermotoga maritima phenotype is impacted by syntrophic interaction with Methanococcus jannaschii in hyperthermophilic coculture

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 72(1), 811โ€“818.

By: M. Johnsonโ€‰ n, S. Conners n, C. Montero n, C. Chou n, K. Shockley n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Coculture Techniques; DNA, Complementary; Gene Expression Profiling; Gene Expression Regulation, Bacterial; Hot Temperature; Methanococcus / growth & development; Oligonucleotide Array Sequence Analysis; Phenotype; Proteome; Thermotoga maritima / classification; Thermotoga maritima / genetics; Thermotoga maritima / growth & development; Thermotoga maritima / metabolism; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018

2006 journal article

Transcriptional and biochemical analysis of starch metabolism in the hyperthermophilic archaeon Pyrococcus furiosus

JOURNAL OF BACTERIOLOGY, 188(6), 2115โ€“2125.

By: H. Leeโ€‰*, K. Shockley n, G. Schutโ€‰*, S. Conners n, C. Montero n, M. Johnson n, C. Chou n, S. Bridger n ...

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Archaeal Proteins / genetics; Bacterial Proteins / genetics; DNA, Archaeal / chemistry; DNA, Archaeal / genetics; Gene Expression Profiling; Gene Expression Regulation, Archaeal; Glucose / metabolism; Glucosephosphates / metabolism; Glucosyltransferases / genetics; Glycogen Debranching Enzyme System / genetics; Glycoside Hydrolases / genetics; Monosaccharide Transport Proteins / genetics; Oligonucleotide Array Sequence Analysis; Pyrococcus furiosus / genetics; Pyrococcus furiosus / metabolism; Sequence Analysis, DNA; Starch / metabolism; Substrate Specificity
Sources: Web Of Science, ORCID
Added: August 6, 2018

2005 journal article

Aflatoxin conducive and non-conducive growth conditions reveal new gene associations with aflatoxin production

FUNGAL GENETICS AND BIOLOGY, 42(6), 506โ€“518.

By: M. Price n, B. Shannon n, T. Sabrina n, A. Robertโ€‰ n & G. Payne n

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: aflatoxin; gene expression; regulation; Aspergillus flavus; Aspergillus parasiticus
MeSH headings : Aflatoxins / biosynthesis; Aspergillus / genetics; Aspergillus / metabolism; Gene Expression; Gene Expression Profiling; Gene Expression Regulation, Fungal; Genes, Fungal; Hydrogen-Ion Concentration; Nitrogen / metabolism; Oligonucleotide Array Sequence Analysis; RNA, Fungal / analysis; RNA, Messenger / analysis; Regulon; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018

2005 journal article

An expression-driven approach to the prediction of carbohydrate transport and utilization regulons in the hyperthermophilic bacterium Thermotoga maritima

JOURNAL OF BACTERIOLOGY, 187(21), 7267โ€“7282.

By: S. Conners n, C. Montero n, D. Comfort n, K. Shockley n, M. Johnson n, . Chhabra n, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : 5' Flanking Region / genetics; ATP-Binding Cassette Transporters / chemistry; ATP-Binding Cassette Transporters / genetics; Biological Evolution; Biological Transport / genetics; Carbohydrate Metabolism; Computational Biology; Gene Duplication; Gene Expression Profiling; Genes, Bacterial; Genes, Regulator; Genomics; Monosaccharide Transport Proteins / genetics; Nucleic Acid Conformation; Oligosaccharides / metabolism; Pentose Phosphate Pathway / genetics; Regulon / physiology; Rhamnose / metabolism; Thermotoga maritima / genetics; Thermotoga maritima / metabolism; Xylose / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2005 patent

Compositions for fracturing subterranean formations

Washington, DC: U.S. Patent and Trademark Office.

By: R. Kellyโ€‰, S. Khanโ€‰, P. Leduc, A. Tayal & R. Prud'homme

Source: NC State University Libraries
Added: August 6, 2018

2005 journal article

Denaturation and aggregation of three alpha-lactalbumin preparations at neutral pH

JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 53(8), 3182โ€“3190.

By: M. McGuffey n, K. Epting n, R. Kelly nโ€‰ & E. Foegeding n

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: alpha-lactalbumin; whey proteins; denaturation and aggregation
MeSH headings : Calorimetry, Differential Scanning; Chemical Phenomena; Chemistry, Physical; Dimerization; Electrophoresis, Polyacrylamide Gel; Hot Temperature; Hydrogen-Ion Concentration; Lactalbumin / chemistry; Nephelometry and Turbidimetry; Protein Denaturation
Sources: Web Of Science, ORCID
Added: August 6, 2018

2005 journal article

Genorne-wide transcriptional variation within and between steady states for continuous growth of the hyperthermophile Thermotoga maritima

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 71(9), 5572โ€“5576.

By: K. Shockley n, K. Scott*, M. Pysz n, S. Conners n, M. Johnson n, C. Montero n, R. Wolfingerโ€‰*, R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
Sources: Web Of Science, ORCID
Added: August 6, 2018

2005 journal article

Influence of divalent cations on the structural thermostability and thermal inactivation kinetics of class II xylose isomerases

FEBS JOURNAL, 272(6), 1454โ€“1464.

By: K. Epting n, C. Vieille*, J. Zeikus*, R. Kelly nโ€‰, R. Kelly, J. Zeikus, C. Vieille

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: inactivation kinetics; metal cofactors; thermostability; xylose isomerases
MeSH headings : Aldose-Ketose Isomerases / antagonists & inhibitors; Aldose-Ketose Isomerases / chemistry; Aldose-Ketose Isomerases / metabolism; Bacillus / enzymology; Bacterial Proteins / antagonists & inhibitors; Bacterial Proteins / chemistry; Bacterial Proteins / metabolism; Cations, Divalent / pharmacology; Cobalt / pharmacology; Enzyme Stability; Escherichia coli / enzymology; Kinetics; Magnesium / pharmacology; Manganese / pharmacology; Protein Denaturation; Recombinant Proteins / antagonists & inhibitors; Recombinant Proteins / chemistry; Recombinant Proteins / metabolism; Thermodynamics; Thermotoga maritima / enzymology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2005 journal article

Population density-dependent regulation of exopolysaccharide formation in the hyperthermophilic bacterium Thermotoga maritima

MOLECULAR MICROBIOLOGY, 55(3), 664โ€“674.

By: M. Johnson n, C. Montero n, S. Conners n, K. Shockley n, S. Bridger n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
MeSH headings : Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Culture Media; Ecosystem; Gene Expression Profiling; Gene Expression Regulation, Bacterial; Genome, Archaeal; Genome, Bacterial; Methanococcus / genetics; Methanococcus / growth & development; Methanococcus / metabolism; Oligonucleotide Array Sequence Analysis; Polysaccharides, Bacterial / metabolism; Signal Transduction; Temperature; Thermotoga maritima / growth & development; Thermotoga maritima / metabolism; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018

2004 chapter

Applications of Genomic Data: Enzyme Discovery and Microbial Genomics

In C. M. Fraser, T. Read, & K. E. Nelson (Eds.), Microbial Genomics. Totowa, NJ: Humana Press, Inc.

By: R. Kellyโ€‰ & K. Shockley

Ed(s): C. Fraser, T. Read & K. Nelson

Source: NC State University Libraries
Added: September 11, 2021

2004 chapter

Expression of Extremophilic Proteins

In F. Baneyx (Ed.), Expression Technologies: Current Status and Future Trends. Horizon Scientific.

By: A. Grunden, D. Comfort, E. Malotky & R. Kellyโ€‰

Ed(s): F. Baneyx

Source: NC State University Libraries
Added: September 11, 2021

2004 article

Functional genomics-based studies of the microbial ecology of hyperthermophilic micro-organisms

Johnson, M. R., Montero, C. I., Conners, S. B., Shockley, K. R., Pysz, M. A., & Kelly, R. M. (2004, April). BIOCHEMICAL SOCIETY TRANSACTIONS, Vol. 32, pp. 188โ€“192.

By: M. Johnson n, C. Montero n, S. Conners n, K. Shockley n, M. Pysz n & R. Kelly nโ€‰

co-author countries: United States of America ๐Ÿ‡บ๐Ÿ‡ธ
author keywords: ecology; functional qenomics; hyperthermophile; microarray; mixed culture
MeSH headings : Biofilms; DNA, Complementary / metabolism; Ecology; Gene Transfer Techniques; Genes, Archaeal; Genome; Genome, Archaeal; Microscopy, Fluorescence; Oligonucleotide Array Sequence Analysis; Phylogeny; RNA, Ribosomal, 16S / genetics; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018

2004 chapter

Pyrococcus furiosus Protease I (PfpI)

In F. Woessner, N. Rawlings, & A. Barrett (Eds.), Handbook of Proteolytic Enzymes (pp. 1393โ€“1395). London: Academic Press Limited.

By: P. Hicks, L. Chang & R. Kellyโ€‰

Ed(s): F. Woessner, N. Rawlings & A. Barrett

Source: NC State University Libraries
Added: September 11, 2021

2004 chapter

Significance of polysaccharides in microbial physiology and the ecology of hydrothermal vent environments

In W. S. D. Wilcock, E. F. DeLong, D. S. Kelley, J. A. Baross, & S. C. Cary (Eds.), The Subseafloor Biosphere at Mid-Ocean Ridges (pp. 213โ€“226). Washington, DC: American Geophysical Union.

By: M. Pysz, C. Montero, S. Chhabra, R. Kellyโ€‰ & K. Rinker

Ed(s): W. Wilcock, E. DeLong, D. Kelley, J. Baross & S. Cary

Source: NC State University Libraries
Added: September 9, 2021

2004 journal article

Strategic biocatalysis with hyperthermophilic enzymes

Green Chemistry, 6(9), 459.

By: D. Comfort n, S. Chhabra*, S. Conners n, C. Chou n, K. Epting n,