Works (333)
Updated: October 23rd, 2023 08:15
2023 article
Complete Genome Sequences of Caldicellulosiruptor acetigenus DSM 7040, Caldicellulosiruptor morganii DSM 8990 (RT8.B8), and Caldicellulosiruptor naganoensis DSM 8991 (NA10)
Bing, R. G. G., Willard, D. J. J., Manesh, M. J. H., Laemthong, T., Crosby, J. R. R., Adams, M. W. W., & Kelly, R. M. M. (2023, February 1). MICROBIOLOGY RESOURCE ANNOUNCEMENTS, Vol. 2.
co-author countries:
United States of America 🇺🇸
doi.org (publisher)
Sources: Web Of Science, ORCID
Added: February 20, 2023
2023 journal article
Complete Genome Sequences of Two Thermophilic Indigenous Bacteria Isolated from Wheat Straw, Thermoclostridium stercorarium subsp. Strain RKWS1 and Thermoanaerobacter sp. Strain RKWS2
MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 12(3).
co-author countries:
United States of America 🇺🇸
Sources: Web Of Science, ORCID
Added: April 17, 2023
2023 journal article
Fermentative conversion of unpretreated plant biomass: A thermophilic threshold for indigenous microbial growth
BIORESOURCE TECHNOLOGY, 367.
co-author countries:
United States of America 🇺🇸
author keywords: Thermophiles; Lignocellulose; Consolidated bioprocessing; Caldicellulosiruptor bescii; Acetivibrio thermocellus
MeSH headings : Biomass; Fermentation; Lignin / chemistry; Clostridium thermocellum / metabolism; Plants / metabolism
Sources: Web Of Science, ORCID
Added: January 17, 2023
2023 article
Innovating Life Sciences Laboratory Training: Molecular Biology Laboratory Education Modules (MBLEMs) as a Model for Advanced Training at Diverse Institutions
JOURNAL OF BIOLOGICAL CHEMISTRY, Vol. 299, pp. S260–S260.
Sources: Web Of Science, ORCID
Added: September 11, 2023
2023 article
Interplay between transcriptional regulators and VapBC toxin-antitoxin loci during thermal stress response in extremely thermoacidophilic archaea
Cooper, C. R., Lewis, A. M., Notey, J. S., Mukherjee, A., Willard, D. J., Blum, P. H., & Kelly, R. M. (2023, February 24). ENVIRONMENTAL MICROBIOLOGY, Vol. 2.
co-author countries:
United States of America 🇺🇸
MeSH headings : Antitoxins / genetics; Toxins, Biological / genetics; Toxins, Biological / metabolism; Heat-Shock Response / genetics; Sulfolobus solfataricus / genetics; Sulfolobus solfataricus / metabolism; Escherichia coli / genetics
Sources: Web Of Science, ORCID
Added: March 13, 2023
2023 article
Manipulating Fermentation Pathways in the Hyperthermophilic Archaeon Pyrococcus furiosus for Ethanol Production up to 95 degrees C Driven by Carbon Monoxide Oxidation
Lipscomb, G. L., Crowley, A. T., Nguyen, D. M. N., Keller, M. W., Hailey C. O'Quinn, Tanwee, T. N. N., … Adams, M. W. W. (2023, May 10). APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Vol. 5.
co-author countries:
United States of America 🇺🇸
author keywords: Pyrococcus furiosus; archaea; thermophile; ethanol; genetic engineering; CO dehydrogenase; bioethanol; carbon monoxide; hyperthermophiles; metabolic engineering; metabolic modeling
Sources: Web Of Science, ORCID
Added: May 22, 2023
2023 journal article
Multiplex CRISPR editing of wood for sustainable fiber production
SCIENCE, 381(6654), 216-+.
co-author countries:
China 🇨🇳 United States of America 🇺🇸
Sources: Web Of Science, ORCID
Added: August 9, 2023
2023 article
Optimizing Strategies for Bio-Based Ethanol Production Using Genome-Scale Metabolic Modeling of the Hyperthermophilic Archaeon, Pyrococcus furiosus
Vailionis, J. L., Zhao, W., Zhang, K., Rodionov, D. A., Lipscomb, G. L., Tanwee, T. N. N., … Zhang, Y. (2023, June 8). APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Vol. 6.
co-author countries:
United States of America 🇺🇸
author keywords: Pyrococcus furiosus; thermophiles; ethanol; genome-scale modeling; CO dehydrogenase; Archaea
Sources: Web Of Science, ORCID
Added: June 19, 2023
2023 journal article
Role of cell-substrate association during plant biomass solubilization by the extreme thermophile Caldicellulosiruptor bescii
EXTREMOPHILES, 27(1).
co-author countries:
Thailand 🇹🇭 United States of America 🇺🇸
author keywords: Caldicellulosiruptor; Extreme thermophile; Lignocellulose; Binding proteins; Tapirins
MeSH headings : Cellulose / metabolism; Biomass; Saccharum / metabolism; Caldicellulosiruptor / metabolism; Clostridiales / metabolism; Plants; Archaea / metabolism
Sources: Web Of Science, ORCID
Added: March 13, 2023
2023 article
Stay or Go: Sulfolobales Biofilm Dispersal Is Dependent on a Bifunctional VapB Antitoxin
Lewis, A. M., Willard, D. J., Manesh, M. J. H. J., Sivabalasarma, S., Albers, S.-V., & Kelly, R. M. (2023, April 10). MBIO, Vol. 4.
co-author countries:
Germany 🇩🇪 United States of America 🇺🇸
author keywords: toxin-antitoxin loci; biofilms; Sulfolobales; thermoacidophiles; Sulfolobus acidocaldarius
MeSH headings : Antitoxins / metabolism; Bacterial Proteins / metabolism; Bacterial Toxins / metabolism; Sulfolobales; Biofilms
Sources: Web Of Science, ORCID
Added: May 9, 2023
2023 journal article
Whither the genus Caldicellulosiruptor and the order Thermoanaerobacterales: phylogeny, taxonomy, ecology, and phenotype
FRONTIERS IN MICROBIOLOGY, 14.
co-author countries:
United States of America 🇺🇸
author keywords: Caldicellulosiruptor; Thermoanaerobacterales; bacteria; thermophiles; phylogeny; ecology; fermentative anaerobes
Sources: Web Of Science, ORCID
Added: August 28, 2023
2022 journal article
Plant biomass fermentation by the extreme thermophile Caldicellulosiruptor bescii for co-production of green hydrogen and acetone: Technoeconomic analysis
BIORESOURCE TECHNOLOGY, 348.
co-author countries:
United States of America 🇺🇸
author keywords: Acetone; Green hydrogen; Caldicellulosiruptor bescii; Extreme thermophiles; Technoeconomic analysis
MeSH headings : Acetone; Biomass; Caldicellulosiruptor; Fermentation; Hydrogen; Lignin / chemistry
Sources: Web Of Science, ORCID
Added: April 25, 2022
2022 article
Biochemical and Regulatory Analyses of Xylanolytic Regulons in Caldicellulosiruptor bescii Reveal Genus-Wide Features of Hemicellulose Utilization
Crosby, J. R., Laemthong, T., Bing, R. G., Zhang, K., Tanwee, T. N. N., Lipscomb, G. L., … Kelly, R. M. (2022, October 11). APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Vol. 10.
co-author countries:
United States of America 🇺🇸
author keywords: Caldicellulosiruptor; extreme thermophile; hemicellulose; xylanases; hemicellulase
MeSH headings : Regulon; Xylans; Cellulose / metabolism; Clostridiales / metabolism; Sugars
Sources: Web Of Science, ORCID
Added: October 24, 2022
2022 article
Engineering Caldicellulosiruptor bescii with Surface Layer Homology Domain-Linked Glycoside Hydrolases Improves Plant Biomass Solubilization
Laemthong, T., Bing, R. G., Crosby, J. R., Adams, M. W. W., & Kelly, R. M. (2022, September 28). APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Vol. 9.
co-author countries:
United States of America 🇺🇸
author keywords: Caldicellulosiruptor; lignocellulose; glycoside hydrolase; surface layer homology (SLH) domain; plant biomass degradation; surface layer homology domain
MeSH headings : Glycoside Hydrolases / metabolism; Biomass; Xylans / metabolism; Xylose; Clostridiales / metabolism; Cellulose / metabolism; Plants / microbiology; Populus
Sources: Web Of Science, ORCID
Added: October 11, 2022
2021 journal article
A genomic catalog of Earth’s microbiomes
Nature Biotechnology, 39, 499–509.
co-author countries:
United States of America 🇺🇸
MeSH headings : Air Microbiology; Animals; Archaea / classification; Archaea / genetics; Archaea / isolation & purification; Bacteria / classification; Bacteria / genetics; Bacteria / isolation & purification; Catalogs as Topic; Ecosystem; Humans; Metabolomics / methods; Metagenome; Metagenomics / methods; Phylogeny; Soil Microbiology; Viruses / genetics; Viruses / isolation & purification; Water Microbiology
Sources: Web Of Science, ORCID
Added: July 27, 2021
2021 chapter
Enzymes from extremely thermophilic bacteria and archaea: Current status and future prospects
In N. A. Arora, S. Agnihotri, & J. Mishra (Eds.), Extremozymes and their Industrial Applications. St. Louis, MO: Elsevier Academic Press.
Ed(s): N. Arora, S. Agnihotri & J. Mishra
Source: NC State University Libraries
Added: July 27, 2021
2021 article
Fox Cluster determinants for iron biooxidation in the extremely thermoacidophilic Sulfolobaceae
Counts, J. A., Vitko, N. P., & Kelly, R. M. (2021, August 30). ENVIRONMENTAL MICROBIOLOGY, Vol. 8.
co-author countries:
United States of America 🇺🇸
MeSH headings : Animals; Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Iron / metabolism; Phylogeny; Proteomics; Sulfolobaceae / genetics
Sources: Web Of Science, ORCID
Added: September 7, 2021
2021 journal article
Genome-Scale Metabolic Model of Caldicellulosiruptor bescii Reveals Optimal Metabolic Engineering Strategies for Bio-based Chemical Production
MSystems, 6(3).
co-author countries:
Russian Federation 🇷🇺 United States of America 🇺🇸
Ed(s): Z. Summers
author keywords: Caldicellulosiruptor bescii; lignocellulose degradation; carbohydrate; Caldicellulosiruptor; carbohydrate utilization; comparative genomics; metabolic reconstruction; plant biomass degradation; regulon
Sources: Crossref, ORCID, Web Of Science
Added: July 14, 2021
2021 journal article
Integrating Bioinformatics Tools into Inquiry-based Molecular Biology Laboratory Education Modules
Frontiers in Education, 6.
co-author countries:
United States of America 🇺🇸
author keywords: bioinformatics; science education; molecular biotechnology; software tools; case studies
Sources: Web Of Science, ORCID
Added: August 23, 2021
2021 journal article
Intersection of Biotic and Abiotic Sulfur Chemistry Supporting Extreme Microbial Life in Hot Acid
JOURNAL OF PHYSICAL CHEMISTRY B, 125(20), 5243–5257.
co-author countries:
United States of America 🇺🇸
MeSH headings : Metals; Oxidation-Reduction; Oxidoreductases / metabolism; Sulfolobus acidocaldarius; Sulfur
Sources: Web Of Science, ORCID
Added: June 14, 2021
2021 journal article
Intersection of Biotic and Abiotic Sulfur Chemistry Supporting Extreme Microbial Life in Hot Acid
Journal of Physical Chemistry B, 125(20), 5243–5257.
Sources: Crossref, ORCID
Added: July 27, 2021
2021 journal article
The biology of thermoacidophilic archaea from the order Sulfolobales
FEMS Microbiology Reviews, 45(4).
co-author countries:
Belgium 🇧🇪 Germany 🇩🇪 United States of America 🇺🇸
author keywords: Archaea; Thermoacidophiles; Sulfolobales
MeSH headings : Archaea / genetics; Biology; Iron; Sulfolobales
Sources: Crossref, ORCID, Web Of Science
Added: July 14, 2021
2021 journal article
Thermophilic microbial deconstruction and conversion of natural and transgenic lignocellulose
Environmental Microbiology Reports, 13(3), 272–293.
co-author countries:
United States of America 🇺🇸
MeSH headings : Biomass; Lignin / chemistry; Plants / metabolism
Sources: Web Of Science, Crossref, ORCID
Added: April 12, 2021
2021 journal article
Transcriptional Regulation of Plant Biomass Degradation and Carbohydrate Utilization Genes in the Extreme Thermophile Caldicellulosiruptor bescii
MSystems, 6(3).
co-author countries:
Germany 🇩🇪 New Zealand 🇳🇿 Russian Federation 🇷🇺 United States of America 🇺🇸
Ed(s): Z. Summers
Sources: Crossref, ORCID
Added: July 14, 2021
2020 journal article
Engineering the cellulolytic extreme thermophile Caldicellulosiruptor bescii to reduce carboxylic acids to alcohols using plant biomass as the energy source
Journal of Industrial Microbiology and Biotechnology, 47(8), 585–597.
co-author countries:
United States of America 🇺🇸
author keywords: Thermophile; Biofuels; Lignocellulose; Metabolic engineering; Caldicellulosiruptor
MeSH headings : Alcohol Dehydrogenase / genetics; Alcohol Dehydrogenase / metabolism; Aldehyde Oxidoreductases / genetics; Aldehyde Oxidoreductases / metabolism; Biofuels / analysis; Biomass; Caldicellulosiruptor / genetics; Carboxylic Acids / metabolism; Ethanol / metabolism; Fermentation; Lignin / metabolism; Microorganisms, Genetically-Modified; Oxidation-Reduction; Panicum / metabolism; Panicum / microbiology; Pyrococcus furiosus / enzymology; Thermoanaerobacter / enzymology
Sources: Web Of Science, ORCID, Crossref
Added: August 31, 2020
2020 journal article
Genome Sequences of Five Type Strain Members of the Archaeal Family Sulfolobaceae, Acidianus ambivalens, Acidianus infernus, Stygiolobus azoricus, Sulfuracidifex metallicus, and Sulfurisphaera ohwakuensis
MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 9(11).
co-author countries:
United States of America 🇺🇸
Sources: Web Of Science, ORCID
Added: April 6, 2020
2020 journal article
Life in hot acid: a genome‐based reassessment of the archaeal order Sulfolobales
Environmental Microbiology, 23(7), 3568–3584.
co-author countries:
United States of America 🇺🇸
MeSH headings : Acidianus; Archaea / genetics; Hot Springs; Oxidation-Reduction; Phylogeny; Sulfolobaceae / genetics; Sulfolobales
Sources: Web Of Science, Crossref, ORCID
Added: September 21, 2020
2020 journal article
Metabolically engineeredCaldicellulosiruptor besciias a platform for producing acetone and hydrogen from lignocellulose
BIOTECHNOLOGY AND BIOENGINEERING, 117(12), 3799–3808.
co-author countries:
United States of America 🇺🇸
author keywords: acetone; Caldicellulosiruptor bescii; extreme thermophiles; metabolic engineering
MeSH headings : Acetone / metabolism; Biomass; Caldicellulosiruptor / genetics; Caldicellulosiruptor / metabolism; Hydrogen / metabolism; Lignin / metabolism; Metabolic Engineering
Sources: Web Of Science, ORCID
Added: September 7, 2020
2020 journal article
Modification of the glycolytic pathway in Pyrococcus furiosus and the implications for metabolic engineering
EXTREMOPHILES, 24(4), 511–518.
co-author countries:
United States of America 🇺🇸
author keywords: Pyrococcus; Thermophile; Central metabolism; Glycolysis
MeSH headings : Fermentation; Glyceraldehyde 3-Phosphate; Glycolysis; Metabolic Engineering; Pyrococcus furiosus
Sources: Web Of Science, ORCID
Added: June 1, 2020
2020 article
The biology and biotechnology of the genus Caldicellulosiruptor: recent developments in 'Caldi World'
Lee, L. L., Crosby, J. R., Rubinstein, G. M., Laemthong, T., Bing, R. G., Straub, C. T., … Kelly, R. M. (2020, January). EXTREMOPHILES, Vol. 24, pp. 1–15.
co-author countries:
United States of America 🇺🇸
author keywords: Caldicellulosiruptor; Extreme thermophiles; Lignocellulose
MeSH headings : Biomass; Biotechnology; Clostridiales; Glycoside Hydrolases; Hot Springs
Sources: Web Of Science, ORCID
Added: February 27, 2020
2020 journal article
Use of the lignocellulose-degrading bacterium Caldicellulosiruptor bescii to assess recalcitrance and conversion of wild-type and transgenic poplar
BIOTECHNOLOGY FOR BIOFUELS, 13(1).
co-author countries:
United States of America 🇺🇸
author keywords: Caldicellulosiruptor; Extreme thermophiles; Lignocellulose; Biofuel; Poplar
Sources: Web Of Science, ORCID
Added: April 6, 2020
2019 journal article
Comparative Biochemical and Structural Analysis of Novel Cellulose Binding Proteins (Tapirins) from Extremely Thermophilic Caldicellulosiruptor Species
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 85(3).
co-author countries:
United States of America 🇺🇸
author keywords: Caldicellulosiruptor; cellulose binding protein; lignocellulose; tapirin
MeSH headings : Amino Acid Sequence; Bacterial Proteins / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Carrier Proteins / chemistry; Carrier Proteins / genetics; Carrier Proteins / metabolism; Cellulose / chemistry; Cellulose / metabolism; Firmicutes / chemistry; Firmicutes / genetics; Firmicutes / metabolism; Genome, Bacterial; Hot Springs / microbiology; Hot Temperature; Protein Domains
Sources: Web Of Science, ORCID
Added: February 11, 2019
2019 journal article
Determinants of sulphur chemolithoautotrophy in the extremely thermoacidophilic Sulfolobales
ENVIRONMENTAL MICROBIOLOGY, 21(10), 3696–3710.
co-author countries:
Germany 🇩🇪 United States of America 🇺🇸
MeSH headings : Autotrophic Processes; Chemoautotrophic Growth; Oxidation-Reduction; Oxidoreductases / metabolism; Sulfolobales / metabolism; Sulfur / metabolism; Thiosulfates / metabolism
Sources: Web Of Science, ORCID
Added: August 12, 2019
2019 journal article
Extreme thermophiles as emerging metabolic engineering platforms
Current Opinion in Biotechnology, 59, 55–64.
co-author countries:
United States of America 🇺🇸
MeSH headings : Archaea; Biotechnology; Genetic Engineering; Metabolic Engineering; Waste Products
Sources: Web Of Science, Crossref, ORCID
Added: November 25, 2019
2019 journal article
Extremely Thermoacidophilic Metallosphaera Species Mediate Mobilization and Oxidation of Vanadium and Molybdenum Oxides
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 85(5).
co-author countries:
United States of America 🇺🇸
author keywords: Metallosphaera; biomining; extreme thermoacidophily; metal biooxidation; molybdenum; vanadium
MeSH headings : Archaeal Proteins / genetics; Copper / metabolism; Ferric Compounds / metabolism; Gene Expression Profiling; Genome, Archaeal; Hot Temperature; Hydrogen-Ion Concentration; Molybdenum / metabolism; Oxidation-Reduction; Oxides / metabolism; Oxygen; Sulfolobaceae / genetics; Sulfolobaceae / metabolism; Sulfur Compounds / metabolism; Transcriptome; Uranium / metabolism; Vanadium / metabolism
Sources: Web Of Science, ORCID
Added: March 11, 2019
2019 journal article
Lignocellulose solubilization and conversion by extremely thermophilic Caldicellulosiruptor bescii improves by maintaining metabolic activity
BIOTECHNOLOGY AND BIOENGINEERING, 116(8), 1901–1908.
co-author countries:
United States of America 🇺🇸
author keywords: biofuels; bioreactor; Caldicellulosiruptor bescii; lignocellulose; switchgrass
MeSH headings : Biofuels / microbiology; Bioreactors; Caldicellulosiruptor; Fermentation; Firmicutes / growth & development; Firmicutes / metabolism; Lignin / metabolism; Panicum / metabolism; Solubility
Sources: Web Of Science, ORCID
Added: August 19, 2019
2019 journal article
Quantitative fermentation of unpretreated transgenic poplar by Caldicellulosiruptor bescii
NATURE COMMUNICATIONS, 10(1).
co-author countries:
United States of America 🇺🇸
Contributors: C. Straub n, P. Khatibi n, J. Wang n , J. Conway n, A. Williams-Rhaesa*, I. Peszlen n , V. Chiang n, M. Adams *, n
MeSH headings : Biomass; Cellulose / metabolism; Clostridiales / genetics; Clostridiales / metabolism; Ethanol / metabolism; Fermentation; Industrial Microbiology; Lignin / metabolism; Metabolic Engineering; Plants, Genetically Modified / chemistry; Plants, Genetically Modified / genetics; Plants, Genetically Modified / metabolism; Polysaccharides / metabolism; Populus / chemistry; Populus / genetics; Populus / metabolism
Sources: Web Of Science, ORCID
Added: August 26, 2019
2019 journal article
The thermophilic biomass-degrading bacterium Caldicellulosiruptor bescii utilizes two enzymes to oxidize glyceraldehyde 3-phosphate during glycolysis
JOURNAL OF BIOLOGICAL CHEMISTRY, 294(25), 9995–10005.
co-author countries:
United States of America 🇺🇸
author keywords: glycolysis; cellulose; metabolism; metabolomics; metalloenzyme; oxidation-reduction (redox); anaerobic glycolysis; iron-sulfur protein; pterin; tungsten
MeSH headings : Biomass; Caldicellulosiruptor; Firmicutes / growth & development; Firmicutes / metabolism; Glyceraldehyde 3-Phosphate / chemistry; Glyceraldehyde 3-Phosphate / metabolism; Glyceraldehyde 3-Phosphate Dehydrogenase (NADP+) / metabolism; Glyceraldehyde-3-Phosphate Dehydrogenases / metabolism; Glycolysis; Metabolome; Oxidation-Reduction; Phylogeny
Sources: Web Of Science, ORCID
Added: July 22, 2019
2018 journal article
A synthetic enzymatic pathway for extremely thermophilic acetone production based on the unexpectedly thermostable acetoacetate decarboxylase from Clostridium acetobutylicum
BIOTECHNOLOGY AND BIOENGINEERING, 115(12), 2951–2961.
co-author countries:
United States of America 🇺🇸
author keywords: acetone; biotransformations; extreme thermophiles
MeSH headings : Acetone / metabolism; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Carboxy-Lyases / genetics; Carboxy-Lyases / metabolism; Clostridium acetobutylicum / enzymology; Clostridium acetobutylicum / genetics; Clostridium acetobutylicum / metabolism; Enzyme Stability; Hot Temperature; Metabolic Engineering; Metabolic Networks and Pathways / genetics; Synthetic Biology / methods
Sources: Web Of Science, ORCID
Added: December 3, 2018
2018 review
Biotechnology of extremely thermophilic archaea
[Review of ]. FEMS MICROBIOLOGY REVIEWS, 42(5), 543–578.
co-author countries:
United States of America 🇺🇸
author keywords: extremely thermophilic archaea; biotechnology; biocatalysis; biooxidation
MeSH headings : Archaea / genetics; Archaea / physiology; Biotechnology / trends; Hot Temperature; Industrial Microbiology / trends; Metabolic Engineering / trends
Sources: Web Of Science, ORCID
Added: November 19, 2018
2018 journal article
Complete Genome Sequences of Extremely Thermoacidophilic Metal-Mobilizing Type Strain Members of the Archaeal Family Sulfolobaceae, Acidianus brierleyi DSM-1651, Acidianus sulfidivorans DSM-18786, and Metallosphaera hakonensis DSM-7519
MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 7(2).
co-author countries:
United States of America 🇺🇸
Sources: Web Of Science, ORCID
Added: December 31, 2018
2018 journal article
Engineering redox-balanced ethanol production in the cellulolytic and extremely thermophilic bacterium, Caldicellulosiruptor bescii
Metabolic Engineering Communications, 7, e00073.
co-author countries:
United States of America 🇺🇸
Sources: Crossref, ORCID
Added: February 24, 2020
2018 journal article
Genus-Wide Assessment of Lignocellulose Utilization in the Extremely Thermophilic Genus Caldicellulosiruptor by Genomic, Pangenomic, and Metagenomic Analyses
Applied and Environmental Microbiology, 84(9), e02694–17.
co-author countries:
United States of America 🇺🇸
Ed(s): I. Cann
author keywords: Caldicellulosiruptor; extreme thermophile; pangenome
MeSH headings : Cellulose / metabolism; Firmicutes / classification; Firmicutes / genetics; Firmicutes / metabolism; Genome, Bacterial; Genomics; Lignin / metabolism; Metagenome; Metagenomics
Sources: Crossref, ORCID
Added: July 27, 2021
2018 journal article
Native xylose-inducible promoter expands the genetic tools for the biomass-degrading, extremely thermophilic bacterium Caldicellulosiruptor bescii
EXTREMOPHILES, 22(4), 629–638.
co-author countries:
United States of America 🇺🇸
author keywords: Anaerobes; Biodegradation of cellulosic; Biotechnology of thermophiles; Genetics; Molecular biology; Genetics of extremophiles
MeSH headings : Biotransformation; Cellulose / metabolism; Firmicutes / drug effects; Firmicutes / genetics; Firmicutes / growth & development; Firmicutes / metabolism; Industrial Microbiology / methods; L-Lactate Dehydrogenase / genetics; L-Lactate Dehydrogenase / metabolism; Promoter Regions, Genetic; Thermotolerance; Xylose / metabolism; Xylose / pharmacology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2018 journal article
Novel multidomain, multifunctional glycoside hydrolases from highly lignocellulolytic Caldicellulosiruptor species
AICHE JOURNAL, 64(12), 4218–4228.
co-author countries:
United States of America 🇺🇸
author keywords: Caldicellulosiruptor; lignocellulose; glycoside hydrolase; cellulase
Sources: Web Of Science, ORCID
Added: November 26, 2018
2018 journal article
Parsing in vivo and in vitro contributions to microcrystalline cellulose hydrolysis by multidomain glycoside hydrolases in the Caldicellulosiruptor bescii secretome
BIOTECHNOLOGY AND BIOENGINEERING, 115(10), 2426–2440.
co-author countries:
United States of America 🇺🇸
author keywords: Caldicellulosiruptor berci; cellulase; extreme thermophile; glycoside hydrolase; lignocellulose; secretome
MeSH headings : Cellulose / chemistry; Cellulose / metabolism; Firmicutes / enzymology; Firmicutes / genetics; Glycoside Hydrolases / chemistry; Glycoside Hydrolases / genetics; Glycoside Hydrolases / metabolism; Hydrolysis
Sources: Web Of Science, ORCID
Added: October 29, 2018
2018 journal article
Secretion and fusion of biogeochemically active archaeal membrane vesicles
GEOBIOLOGY, 16(6), 659–673.
co-author countries:
United States of America 🇺🇸
author keywords: archaea; membrane fusion; regulated secretion; thermoacidophiles; vesicles
MeSH headings : Archaea / metabolism; Archaea / physiology; Archaeal Proteins / metabolism
Sources: Web Of Science, ORCID
Added: October 29, 2018
2018 journal article
Sequential processing with fermentative Caldicellulosiruptor kronotskyensis and chemolithoautotrophic Cupriavidus necator for converting rice straw and CO2 to polyhydroxybutyrate
BIOTECHNOLOGY AND BIOENGINEERING, 115(6), 1624–1629.
co-author countries:
China 🇨🇳 United States of America 🇺🇸
author keywords: biorefinery; Caldicellulosiruptor; CO2 fixation; Cupriavidus necator; fermentation; lignocellulose
MeSH headings : Animals; Carbon Dioxide / metabolism; Cupriavidus necator / growth & development; Cupriavidus necator / metabolism; Firmicutes / growth & development; Firmicutes / metabolism; Hydroxybutyrates / metabolism; Oryza / metabolism; Plant Stems / metabolism; Polyesters / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2018 journal article
Simultaneous biosynthesis of (R)-acetoin and ethylene glycol from D-xylose through in vitro metabolic engineering
Metabolic Engineering Communications, 7, e00074.
co-author countries:
China 🇨🇳 United States of America 🇺🇸
Sources: Crossref, ORCID
Added: February 24, 2020
2018 journal article
The diversity and specificity of the extracellular proteome in the cellulolytic bacterium Caldicellulosiruptor bescii is driven by the nature of the cellulosic growth substrate
BIOTECHNOLOGY FOR BIOFUELS, 11.
co-author countries:
Germany 🇩🇪 United States of America 🇺🇸
author keywords: Caldicellulosiruptor bescii; Carbohydrate-active enzymes (CAZymes); Extracellular solute binding proteins (ESBPs); Protein of unknown function (PUF); Glycosyl hydrolases (GH); Mass spectrometry; Switchgrass; Xylan; Avicel; C5 substrates; C6 substrates; Lignocellulosic; Extracellular
Sources: Web Of Science, ORCID
Added: August 6, 2018
2018 journal article
Uncoupling Fermentative Synthesis of Molecular Hydrogen from Biomass Formation in Thermotoga maritima
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 84(17).
co-author countries:
United States of America 🇺🇸
author keywords: Hyperthermophile; MalK; hydrogen; transient gene inactivation; adaptive laboratory evolution; bacterial genetics; fermentation; hydrogen; Thermotoga maritima
MeSH headings : ATP-Binding Cassette Transporters / genetics; Bacterial Proteins / genetics; Biological Transport / genetics; Biomass; Bioreactors / microbiology; Energy Metabolism / genetics; Energy Metabolism / physiology; Hydrogen / metabolism; L-Lactate Dehydrogenase / genetics; Lactic Acid / biosynthesis; Maltose / metabolism; Thermotoga maritima / genetics; Thermotoga maritima / metabolism
Sources: Web Of Science, ORCID
Added: October 19, 2018
2017 journal article
Bioavailability of Carbohydrate Content in Natural and Transgenic Switchgrasses for the Extreme Thermophile Caldicellulosiruptor bescii
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 83(17).
co-author countries:
United States of America 🇺🇸
author keywords: Caldicellulosiruptor; switchgrass; lignocellulose deconstruction and conversion; extreme thermophiles; lignocellulose
MeSH headings : Biomass; Fermentation; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / metabolism; Hot Temperature; Lignin / chemistry; Lignin / metabolism; Panicum / chemistry; Panicum / genetics; Panicum / metabolism; Panicum / microbiology; Plants, Genetically Modified / chemistry; Plants, Genetically Modified / genetics; Plants, Genetically Modified / metabolism; Plants, Genetically Modified / microbiology; Polysaccharides / chemistry; Polysaccharides / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2017 journal article
C aldicellulosiruptor saccharolyticus transcriptomes reveal consequences of chemical pretreatment and genetic modification of lignocellulose
Microbial Biotechnology, 10(6), 1546–1557.
co-author countries:
United States of America 🇺🇸
MeSH headings : Acids / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Biotransformation; Firmicutes / genetics; Firmicutes / metabolism; Lignin / metabolism; Populus / chemistry; Populus / genetics; Populus / metabolism; Populus / microbiology; Transcriptome
Sources: Crossref, ORCID
Added: July 21, 2021
2017 journal article
Diversity of bacteria and archaea from two shallow marine hydrothermal vents from Vulcano Island
Extremophiles, 21(4), 733–742.
co-author countries:
Germany 🇩🇪
author keywords: Hyperthermophiles; Archaea; Diversity; Hydrothermal marine shallow vents
MeSH headings : Archaea / classification; Archaea / genetics; Bacteria / classification; Bacteria / genetics; Hydrothermal Vents / microbiology; Italy; Marine Biology; RNA, Ribosomal, 16S / genetics
Sources: Crossref, ORCID
Added: August 3, 2021
2017 journal article
Ethanol production by the hyperthermophilic archaeon Pyrococcus furiosus by expression of bacterial bifunctional alcohol dehydrogenases
Microbial Biotechnology, 10(6), 1535–1545.
co-author countries:
United States of America 🇺🇸
Sources: Crossref, ORCID
Added: July 21, 2021
2017 review
Extremely thermophilic energy metabolisms: biotechnological prospects
[Review of ]. CURRENT OPINION IN BIOTECHNOLOGY, 45, 104–112.
co-author countries:
United States of America 🇺🇸
MeSH headings : Archaea / classification; Archaea / genetics; Archaea / metabolism; Biotechnology / methods; Carbon Dioxide / metabolism; Chemoautotrophic Growth; Energy Metabolism; Hot Temperature; Lignin / metabolism; Metabolic Engineering
Sources: Web Of Science, ORCID
Added: August 6, 2018
2017 journal article
Functional Analysis of the Glucan Degradation Locus in Caldicellulosiruptor bescii Reveals Essential Roles of Component Glycoside Hydrolases in Plant Biomass Deconstruction
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 83(24).
co-author countries:
United States of America 🇺🇸
author keywords: Caldicellulosiruptor; extreme thermophile; cellulose degradation; lignocellulose; glycoside hydrolase; cellulase
MeSH headings : Bacterial Proteins / metabolism; Cellulose / chemistry; Firmicutes / genetics; Firmicutes / metabolism; Glucans / metabolism; Glycoside Hydrolases / metabolism; Panicum / chemistry; Populus / chemistry
Sources: Web Of Science, ORCID
Added: August 6, 2018
2017 journal article
Genome Stability in Engineered Strains of the Extremely Thermophilic Lignocellulose-Degrading Bacterium Caldicellulosiruptor bescii
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 83(14).
co-author countries:
United States of America 🇺🇸
author keywords: Southern blotting; genome sequencing; insertion elements; kanamycin resistance
MeSH headings : Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Genetic Engineering; Genome, Bacterial; Genomic Instability; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / metabolism; Hot Temperature; Lignin / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2017 journal article
Impact of growth mode, phase, and rate on the metabolic state of the extremely thermophilic archaeon Pyrococcus furiosus
BIOTECHNOLOGY AND BIOENGINEERING, 114(12), 2947–2954.
co-author countries:
United States of America 🇺🇸
author keywords: continuous culture; growth phase; growth rate; hyperthermophiles; Pyrococcus furiosus; transcriptome
MeSH headings : Archaeal Proteins / metabolism; Batch Cell Culture Techniques / methods; Cell Proliferation / physiology; Energy Metabolism / physiology; Pyrococcus furiosus / growth & development; Pyrococcus furiosus / metabolism; Transcriptome / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2017 review
Physiological, metabolic and biotechnological features of extremely thermophilic microorganisms
[Review of ]. WILEY INTERDISCIPLINARY REVIEWS-SYSTEMS BIOLOGY AND MEDICINE, 9(3).
co-author countries:
United States of America 🇺🇸
MeSH headings : Biocatalysis; Carbohydrate Metabolism; Carbon Dioxide / metabolism; Glycolysis; Metabolic Engineering; Metals / chemistry; Metals / metabolism; Sulfolobales / metabolism; Sulfur / metabolism; Thermoanaerobacter / metabolism; Thermococcales / metabolism; Thermus / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2017 report
Sequestration of CO2 with H2 into useful products
(US Patent No. 9,587,256).
Source: NC State University Libraries
Added: August 27, 2021
2017 article
The renaissance of life near the boiling point - at last, genetics and metabolic engineering
Adams, M. W. W., & Kelly, R. M. (2017, January). MICROBIAL BIOTECHNOLOGY, Vol. 10, pp. 37–39.
co-author countries:
United States of America 🇺🇸
MeSH headings : Biotechnology / methods; Hot Temperature; Industrial Microbiology / methods; Metabolic Engineering / methods
Sources: Web Of Science, ORCID
Added: August 6, 2018
2017 journal article
Two Distinct alpha-L-Arabinofuranosidases in Caldicellulosiruptor Species Drive Degradation of Arabinose-Based Polysaccharides
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 83(13).
co-author countries:
Bangladesh 🇧🇩 China 🇨🇳 United States of America 🇺🇸
author keywords: Arabinofuranosidase; bioenergy; glycoside hydrolase; hyperthermophiles; synergism
MeSH headings : Arabinose / metabolism; Bacterial Proteins / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Firmicutes / chemistry; Firmicutes / enzymology; Firmicutes / genetics; Firmicutes / metabolism; Glycoside Hydrolases / chemistry; Glycoside Hydrolases / genetics; Glycoside Hydrolases / metabolism; Hydrogen-Ion Concentration; Molecular Weight; Polysaccharides / metabolism; Substrate Specificity
Sources: Web Of Science, ORCID
Added: August 6, 2018
2017 journal article
VapC toxins drive cellular dormancy under uranium stress for the extreme thermoacidophile Metallosphaera prunae
ENVIRONMENTAL MICROBIOLOGY, 19(7), 2831–2842.
co-author countries:
United States of America 🇺🇸
MeSH headings : Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Bacterial Toxins / genetics; Bacterial Toxins / metabolism; Gene Expression Regulation, Bacterial / physiology; RNA Stability / physiology; Sulfolobaceae / genetics; Sulfolobaceae / growth & development; Sulfolobaceae / metabolism; Transcriptome; Uranium / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2016 journal article
A Highly Thermostable Kanamycin Resistance Marker Expands the Tool Kit for Genetic Manipulation of Caldicellulosiruptor bescii
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 82(14), 4421–4428.
co-author countries:
United States of America 🇺🇸
MeSH headings : Firmicutes / genetics; Firmicutes / radiation effects; Genetics, Microbial / methods; Genomic Instability / radiation effects; Hot Temperature; Kanamycin Resistance; Molecular Biology / methods; Selection, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018
2016 journal article
Ancillary contributions of heterologous biotin protein ligase and carbonic anhydrase for CO2 incorporation into 3-hydroxypropionate by metabolically engineered Pyrococcus furiosus
Biotechnology and Bioengineering, 113(12), 2652–2660.
co-author countries:
United States of America 🇺🇸
author keywords: biotin protein ligase; carboxylase; carbon dioxide; Pyrococcus furiosus; 3-hydroxypropionate; Metallosphaera sedula
MeSH headings : Carbon Dioxide / chemistry; Carbon Dioxide / metabolism; Carbon-Nitrogen Ligases / metabolism; Carbonic Anhydrases / genetics; Escherichia coli Proteins / metabolism; Lactic Acid / analogs & derivatives; Lactic Acid / biosynthesis; Lactic Acid / chemistry; Metabolic Engineering / methods; Protein Engineering / methods; Pyrococcus furiosus / physiology; Recombinant Proteins / genetics; Recombinant Proteins / metabolism; Repressor Proteins / metabolism; Sulfolobaceae / genetics; Sulfolobaceae / metabolism
Sources: Crossref, ORCID
Added: December 31, 2020
2016 chapter
Extreme Thermophiles as Metabolic Engineering Platforms: Strategies and Current Perspective
In C. Wittmann & J. C. Liao (Eds.), Industrial Biotechnology: Microorganisma (Vol. 1, pp. 505–580).
co-author countries:
United States of America 🇺🇸
Ed(s): C. Wittmann & J. Liao
Sources: Crossref, ORCID
Added: July 30, 2021
2016 journal article
Heterologous Production of an Energy-Conserving Carbon Monoxide Dehydrogenase Complex in the Hyperthermophile Pyrococcus furiosus
FRONTIERS IN MICROBIOLOGY, 7.
co-author countries:
United States of America 🇺🇸
author keywords: hyperthermophile; archaea; hydrogen; carbon monoxide; energy; anaerobic respiration; Thermococcales
Sources: Web Of Science, ORCID
Added: August 6, 2018
2016 journal article
Multidomain, Surface Layer-associated Glycoside Hydrolases Contribute to Plant Polysaccharide Degradation by Caldicellulosiruptor Species
JOURNAL OF BIOLOGICAL CHEMISTRY, 291(13), 6732–6747.
co-author countries:
United States of America 🇺🇸
author keywords: biofuel; cell surface; cell surface enzyme; enzyme; glycoside hydrolase; plant cell wall; Caldicellulosiruptor; S-layer; lignocellulose
MeSH headings : Bacterial Proteins / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Cloning, Molecular; Clostridiales / chemistry; Clostridiales / classification; Clostridiales / enzymology; Escherichia coli / genetics; Escherichia coli / metabolism; Gene Expression; Genome, Bacterial; Glucans / metabolism; Glycoside Hydrolases / chemistry; Glycoside Hydrolases / genetics; Glycoside Hydrolases / metabolism; Kinetics; Mutation; Phylogeny; Polysaccharides / metabolism; Protein Binding; Protein Engineering; Protein Structure, Tertiary; Recombinant Proteins / chemistry; Recombinant Proteins / genetics; Recombinant Proteins / metabolism; Substrate Specificity; Wood / metabolism; Xylans / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2016 journal article
Reaction kinetic analysis of the 3-hydroxypropionate/4-hydroxybutyrate CO2 fixation cycle in extremely thermoacidophilic archaea
METABOLIC ENGINEERING, 38, 446–463.
co-author countries:
United States of America 🇺🇸
author keywords: CO2 fixation; 3-hydroxypropionate; 4-hydroxybutyrate; Metallosphaera sedula
MeSH headings : Archaea / metabolism; Carbon Dioxide / metabolism; Extremophiles / metabolism; Hydroxybutyrates / metabolism; Kinetics; Lactic Acid / analogs & derivatives; Lactic Acid / metabolism; Metabolic Clearance Rate; Metabolic Flux Analysis / methods; Metabolic Networks and Pathways / physiology; Models, Biological; Signal Transduction / physiology; Sulfolobaceae / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2016 journal article
Temperature-dependent acetoin production by Pyrococcus furiosus is catalyzed by a biosynthetic acetolactate synthase and its deletion improves ethanol production
METABOLIC ENGINEERING, 34, 71–79.
co-author countries:
United States of America 🇺🇸
author keywords: Archaea; Hyperthermophile; Genetic engineering; Acetolactate synthase; Acetoin; Ethanol
MeSH headings : Acetoin / metabolism; Acetolactate Synthase / biosynthesis; Acetolactate Synthase / genetics; Catalysis; Ethanol / isolation & purification; Ethanol / metabolism; Gene Deletion; Genetic Enhancement / methods; Metabolic Engineering / methods; Metabolic Networks and Pathways / physiology; Pyrococcus furiosus / genetics; Pyrococcus furiosus / metabolism; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018
2016 journal article
Transcriptomes of the Extremely Thermoacidophilic Archaeon Metallosphaera sedula Exposed to Metal "Shock" Reveal Generic and Specific Metal Responses
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 82(15), 4613–4627.
co-author countries:
United States of America 🇺🇸
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
A New Class of Tungsten-Containing Oxidoreductase in Caldicellulosiruptor, a Genus of Plant Biomass-Degrading Thermophilic Bacteria
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 81(20), 7339–7347.
co-author countries:
United States of America 🇺🇸
MeSH headings : Aldehydes / metabolism; Bacterial Proteins / metabolism; Gram-Positive Bacteria / enzymology; Gram-Positive Bacteria / metabolism; Oxidation-Reduction; Oxidoreductases / chemistry; Oxidoreductases / metabolism; Pyrococcus furiosus / enzymology; Pyrococcus furiosus / metabolism; Tungsten / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
A hybrid synthetic pathway for butanol production by a hyperthermophilic microbe
METABOLIC ENGINEERING, 27, 101–106.
co-author countries:
United States of America 🇺🇸
author keywords: Butanol; Biofuels; Hyperthermophile; Module; Hybrid; Pathway
MeSH headings : 1-Butanol / metabolism; Acetyl Coenzyme A / genetics; Acetyl Coenzyme A / metabolism; Metabolic Engineering / methods; Thermoanaerobacterium / genetics; Thermoanaerobacterium / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
A mutant ('lab strain') of the hyperthermophilic archaeon Pyrococcus furiosus, lacking flagella, has unusual growth physiology
EXTREMOPHILES, 19(2), 269–281.
co-author countries:
Denmark 🇩🇰 United States of America 🇺🇸
author keywords: Pyrococcus furiosus; Hyperthermophile; Archaeon; Growth physiology; Flagella
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
Alcohol Selectivity in a Synthetic Thermophilic n-Butanol Pathway Is Driven by Biocatalytic and Thermostability Characteristics of Constituent Enzymes
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 81(20), 7187–7200.
co-author countries:
United States of America 🇺🇸
MeSH headings : 1-Butanol / metabolism; Acetyl-CoA C-Acyltransferase / metabolism; Acyl Coenzyme A / metabolism; Alcohol Dehydrogenase / metabolism; Alcohol Oxidoreductases / metabolism; Aldehyde Oxidoreductases / metabolism; Biocatalysis; Chromatography, Gas; Clostridium acetobutylicum / metabolism; Clostridium thermocellum / metabolism; Thermoanaerobacter / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
Bioprocessing analysis of Pyrococcus furiosus strains engineered for CO2-based 3-hydroxypropionate production
BIOTECHNOLOGY AND BIOENGINEERING, 112(8), 1533–1543.
co-author countries:
United States of America 🇺🇸
author keywords: 3-hydroxypropionate; CO2 fixation; Metallosphaera sedula; Pyrococcus furiosus
MeSH headings : Bioreactors / microbiology; Carbon Dioxide / metabolism; Gene Expression Profiling; Hot Temperature; Lactic Acid / analogs & derivatives; Lactic Acid / metabolism; Maltose / metabolism; Metabolic Engineering / methods; Metabolic Networks and Pathways / genetics; Pyrococcus furiosus / genetics; Pyrococcus furiosus / metabolism; Pyrococcus furiosus / radiation effects; Sulfolobaceae / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
Comparative Analysis of Extremely Thermophilic Caldicellulosiruptor Species Reveals Common and Unique Cellular Strategies for Plant Biomass Utilization
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 81(20), 7159–7170.
co-author countries:
United States of America 🇺🇸
MeSH headings : Bacteria / metabolism; Biomass; Cellulase / metabolism; Panicum / enzymology; Panicum / metabolism; Plants / enzymology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 journal article
Complete Genome Sequences of Caldicellulosiruptor sp. Strain Rt8.B8, Caldicellulosiruptor sp. Strain Wai35.B1, and “ Thermoanaerobacter cellulolyticus ”
Complete Genome Sequences of Caldicellulosiruptor sp. Strain Rt8.B8, Caldicellulosiruptor sp. Strain Wai35.B1, and “ Thermoanaerobacter cellulolyticus .” Genome Announcements, 3(3).
co-author countries:
United States of America 🇺🇸
Sources: Crossref, ORCID
Added: July 21, 2021
2015 journal article
Discrete and Structurally Unique Proteins (Tapirins) Mediate Attachment of Extremely Thermophilic Caldicellulosiruptor Species to Cellulose
JOURNAL OF BIOLOGICAL CHEMISTRY, 290(17), 10645–10656.
co-author countries:
United States of America 🇺🇸
MeSH headings : Adsorption; Bacteria / genetics; Bacteria / metabolism; Bacteria / ultrastructure; Bacterial Adhesion / physiology; Bacterial Proteins / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Binding Sites; Cellulose / metabolism; Fimbriae, Bacterial / metabolism; Genes, Bacterial; Models, Molecular; Phylogeny; Plants / microbiology; Protein Structure, Tertiary; Recombinant Proteins / chemistry; Recombinant Proteins / genetics; Recombinant Proteins / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 review
Extremely thermophilic microorganisms as metabolic engineering platforms for production of fuels and industrial chemicals
[Review of ]. FRONTIERS IN MICROBIOLOGY, 6.
co-author countries:
United States of America 🇺🇸
author keywords: extreme thermophiles; metabolic engineering; bio-based chemicals; genetics; biotechnology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2015 report
Genetically engineered microbes and methods for converting organic acid to alcohols
(US Patent Application No. 14/670,601).
Source: NC State University Libraries
Added: August 27, 2021
2015 journal article
Machine learning reveals sex-specific 17β-estradiol-responsive expression patterns in white perch (Morone americana) plasma proteins
PROTEOMICS, 15(15), 2678–2690.
co-author countries:
Japan 🇯🇵 United States of America 🇺🇸
Contributors: J. Schilling n, A. Nepomuceno n, A. Planchart n , J. Yoder n , n , D. Muddiman n , H. Daniels n, N. Hiramatsu*, B. Reading n
author keywords: Animal proteomics; Endocrine disrupting compounds; Machine learning; Plasma; Semiquantitative proteomics; Support vector machines
MeSH headings : Animals; Bass / metabolism; Blood Proteins / metabolism; Blotting, Western; Chromatography, Liquid; Estradiol / pharmacology; Estrogens / pharmacology; Female; Fish Proteins / metabolism; Kininogens / metabolism; Male; Nanotechnology / methods; Proteome / drug effects; Proteome / metabolism; Proteomics / methods; Sex Factors; Support Vector Machine; Tandem Mass Spectrometry; Vitellogenins / metabolism
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2015 review
The Confluence of Heavy Metal Biooxidation and Heavy Metal Resistance: Implications for Bioleaching by Extreme Thermoacidophiles
[Review of ]. MINERALS, 5(3), 397–451.
co-author countries:
United States of America 🇺🇸
author keywords: extreme thermoacidophiles; bioleaching; heavy metal resistance; heavy metal biooxidation; archaea
Sources: Web Of Science, ORCID
Added: August 6, 2018
2014 journal article
Conversion of 4-Hydroxybutyrate to Acetyl Coenzyme A and Its Anapleurosis in the Metallosphaera sedula 3-Hydroxypropionate/4-Hydroxybutyrate Carbon Fixation Pathway
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 80(8), 2536–2545.
co-author countries:
United States of America 🇺🇸
MeSH headings : Acetyl Coenzyme A / metabolism; Carbon Cycle; Escherichia coli / genetics; Gene Expression Profiling; Metabolic Networks and Pathways / genetics; Recombinant Proteins / genetics; Recombinant Proteins / isolation & purification; Recombinant Proteins / metabolism; Sodium Oxybate / metabolism; Sulfolobaceae / metabolism; Transcriptome
Sources: Web Of Science, ORCID
Added: August 6, 2018
2014 journal article
Cross-linked Polymer Nanofibers for Hyperthermophilic Enzyme Immobilization: Approaches to Improve Enzyme Performance
ACS APPLIED MATERIALS & INTERFACES, 6(15), 11899–11906.
co-author countries:
United States of America 🇺🇸
author keywords: enzyme immobilization; nanofibers; electrospinning; biocatalysts; mass transfer
MeSH headings : Catalysis; Cross-Linking Reagents / chemistry; Electrochemistry; Enzymes, Immobilized / chemistry; Escherichia coli / metabolism; Hydrogen-Ion Concentration; Kinetics; Microscopy, Electron, Scanning; Nanofibers / chemistry; Nanotechnology / methods; Polymers / chemistry; Polyvinyl Alcohol / chemistry; Solvents / chemistry; Temperature; Thermotoga maritima / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2014 journal article
Deletion of acetyl-CoA synthetases I and II increases production of 3-hydroxypropionate by the metabolically-engineered hyperthermophile Pyrococcus furiosus
METABOLIC ENGINEERING, 22, 83–88.
co-author countries:
United States of America 🇺🇸
author keywords: Electrofuels; Metallosphaera sedula; Acetyl-CoA synthetase; 3-Hydroxypropionate
MeSH headings : Archaeal Proteins; Coenzyme A Ligases; Gene Deletion; Lactic Acid / analogs & derivatives; Lactic Acid / metabolism; Metabolic Engineering / methods; Pyrococcus furiosus / genetics; Pyrococcus furiosus / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2014 journal article
Engineering Hydrogen Gas Production from Formate in a Hyperthermophile by Heterologous Production of an 18-Subunit Membrane-bound Complex
JOURNAL OF BIOLOGICAL CHEMISTRY, 289(5), 2873–2879.
co-author countries:
United States of America 🇺🇸
author keywords: Archaea; Enzymes; Genetics; Metabolic Engineering; Microbiology; Hydrogen; Hyperthermophiles
MeSH headings : Biofuels / microbiology; Formates / metabolism; Gases / metabolism; Genes, Bacterial / genetics; Hydrogen / metabolism; Membrane Proteins / genetics; Membrane Proteins / metabolism; Metabolic Engineering / methods; Multienzyme Complexes / genetics; Multienzyme Complexes / metabolism; Operon / genetics; Pyrococcus furiosus / enzymology; Pyrococcus furiosus / genetics; Thermococcus / enzymology; Thermococcus / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018
2014 journal article
Nanofibrous membranes for single-step immobilization of hyperthermophilic enzymes
JOURNAL OF MEMBRANE SCIENCE, 472, 251–260.
co-author countries:
United States of America 🇺🇸
author keywords: Enzyme immobilization; Nanofibers; Electrospinning; Chemical crosslinking; Hyperthermophilic enzymes
Sources: Web Of Science, ORCID
Added: August 6, 2018
2014 journal article
Production of lignofuels and electrofuels by extremely thermophilic microbes
Biofuels, 5(5), 499–515.
co-author countries:
United States of America 🇺🇸
author keywords: extreme thermophiles; Pyrococcus furiosus; Metallosphaera sedula; Caldicellulosiruptor; biofuels; electrofuels; CO2 fixation; lignocellulose
Sources: Crossref, ORCID
Added: February 24, 2020
2014 journal article
Role of an Archaeal PitA Transporter in the Copper and Arsenic Resistance of Metallosphaera sedula, an Extreme Thermoacidophile
JOURNAL OF BACTERIOLOGY, 196(20), 3562–3570.
MeSH headings : Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Arsenic / metabolism; Arsenic / toxicity; Biological Transport; Copper / metabolism; Copper / toxicity; Gene Expression Regulation, Archaeal / physiology; Genome, Archaeal; Molecular Sequence Data; Sulfolobaceae / drug effects; Sulfolobaceae / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2014 journal article
Single gene insertion drives bioalcohol production by a thermophilic archaeon
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 111(49), 17618–17623.
co-author countries:
United States of America 🇺🇸
author keywords: Archaea; metabolic engineering; hyperthermophile; carbon monoxide; aldehydes
MeSH headings : Acetates / chemistry; Aldehyde Oxidoreductases / genetics; Aldehyde Oxidoreductases / metabolism; Aldehydes / chemistry; Biofuels; Carbon Monoxide / chemistry; Escherichia coli / metabolism; Ethanol / chemistry; Fermentation; Maltose / chemistry; Mutagenesis, Insertional; Protein Engineering / methods; Pyrococcus furiosus / genetics; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018
2014 chapter
The Extremely Thermophilic Genus Caldicellulosiruptor: Physiological and Genomic Characteristics for Complex Carbohydrate Conversion to Molecular Hydrogen
In Microbial BioEnergy: Hydrogen Production (pp. 177–195).
co-author countries:
United States of America 🇺🇸
Sources: Crossref, ORCID
Added: July 21, 2021
2014 chapter
The Order Thermococcales and the Family Thermococcaceae
In The Prokaryotes (pp. 363–383).
co-author countries:
United States of America 🇺🇸
Sources: Crossref, ORCID
Added: July 21, 2021
2014 review
Thermophilic lignocellulose deconstruction
[Review of ]. FEMS MICROBIOLOGY REVIEWS, 38(3), 393–448.
co-author countries:
Israel 🇮🇱 United States of America 🇺🇸
author keywords: thermophilic microorganisms; cellulosome; lignocellulose deconstruction; carbohydrate-active enzymes; systems biology; bioenergy
MeSH headings : Biofuels; Cellulosomes / genetics; Cellulosomes / metabolism; Gram-Positive Endospore-Forming Bacteria / classification; Gram-Positive Endospore-Forming Bacteria / enzymology; Gram-Positive Endospore-Forming Bacteria / genetics; Hot Temperature; Lignin / metabolism; Molecular Sequence Data; Plants / metabolism; Soil Microbiology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
A thermophile under pressure: Transcriptional analysis of the response of Caldicellulosiruptor saccharolyticus to different H-2 partial pressures
INTERNATIONAL JOURNAL OF HYDROGEN ENERGY, 38(4), 1837–1849.
co-author countries:
Netherlands 🇳🇱 United States of America 🇺🇸
author keywords: Caldicellulosiruptor saccharolyticus; Hydrogen partial pressure; Chemostat; Metabolic shift; Gene expression; Rex transcriptional regulator
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 review
Biological conversion of carbon dioxide and hydrogen into liquid fuels and industrial chemicals
[Review of ]. CURRENT OPINION IN BIOTECHNOLOGY, 24(3), 376–384.
co-author countries:
United States of America 🇺🇸
MeSH headings : Bioelectric Energy Sources; Biotechnology / methods; Carbon Cycle / genetics; Carbon Dioxide / metabolism; Chemical Industry; Hydrogen / metabolism; Metabolic Engineering / methods
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Carbohydrate and lignin are simultaneously solubilized from unpretreated switchgrass by microbial action at high temperature
Energy & Environmental Science, 6(7), 2186.
co-author countries:
United States of America 🇺🇸
Source: Crossref
Added: February 24, 2020
2013 journal article
Exploiting microbial hyperthermophilicity to produce an industrial chemical, using hydrogen and carbon dioxide
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 110(15), 5840–5845.
co-author countries:
United States of America 🇺🇸
author keywords: anaerobe; archaea; biotechnology; metabolic engineering; thermophile
MeSH headings : Carbohydrates / chemistry; Carbon Dioxide / chemistry; Gases; Genetic Engineering; Hydrogen / chemistry; Industrial Microbiology / methods; Lactic Acid / analogs & derivatives; Lactic Acid / biosynthesis; Lactic Acid / chemistry; Operon; Polymerase Chain Reaction; Pyrococcus furiosus / genetics; Pyrococcus furiosus / growth & development; Pyrococcus furiosus / metabolism; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Role of 4-Hydroxybutyrate-CoA Synthetase in the CO2 Fixation Cycle in Thermoacidophilic Archaea
JOURNAL OF BIOLOGICAL CHEMISTRY, 288(6), 4012–4022.
co-author countries:
United States of America 🇺🇸
MeSH headings : Archaeal Proteins / chemistry; Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Carbon Dioxide / metabolism; Catalysis; Catalytic Domain; Coenzyme A-Transferases / chemistry; Coenzyme A-Transferases / genetics; Coenzyme A-Transferases / metabolism; Genome, Archaeal / physiology; Hydroxybutyrates / chemistry; Hydroxybutyrates / metabolism; Sulfolobaceae / enzymology; Sulfolobaceae / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Stationary Phase and Nutrient Levels Trigger Transcription of a Genomic Locus Containing a Novel Peptide (TM1316) in the Hyperthermophilic Bacterium Thermotoga maritima
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 79(21), 6637–6646.
co-author countries:
United States of America 🇺🇸
MeSH headings : Carbon / metabolism; Gene Expression Regulation, Bacterial / genetics; Gene Expression Regulation, Bacterial / physiology; Genetic Loci / genetics; Microscopy, Fluorescence; Molecular Sequence Annotation / methods; Nitrogen / metabolism; Operon / genetics; Peptides / genetics; Thermotoga maritima / genetics; Thermotoga maritima / growth & development; Thermotoga maritima / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2012 journal article
Caldicellulosiruptor Core and Pangenomes Reveal Determinants for Noncellulosomal Thermophilic Deconstruction of Plant Biomass
JOURNAL OF BACTERIOLOGY, 194(15), 4015–4028.
co-author countries:
United States of America 🇺🇸
MeSH headings : Adhesins, Bacterial / analysis; Adhesins, Bacterial / genetics; Biomass; Carbohydrate Metabolism; Cellulases / analysis; Cellulases / genetics; Cellulose / metabolism; Genetic Variation; Genome, Bacterial; Gram-Positive Bacteria / enzymology; Gram-Positive Bacteria / genetics; Metabolic Networks and Pathways / genetics; Plants / chemistry; Proteome / analysis
Sources: Web Of Science, ORCID
Added: August 6, 2018
2012 journal article
Epimerase (Msed_0639) and Mutase (Msed_0638 and Msed_2055) Convert (S)-Methylmalonyl-Coenzyme A (CoA) to Succinyl-CoA in the Metallosphaera sedula 3-Hydroxypropionate/4-Hydroxybutyrate Cycle
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 78(17), 6194–6202.
co-author countries:
United States of America 🇺🇸
MeSH headings : Acyl Coenzyme A / metabolism; Autotrophic Processes; Biotransformation; Carbon Dioxide / metabolism; Cobamides / metabolism; Escherichia coli / genetics; Gene Expression; Gene Expression Profiling; Heterotrophic Processes; Hydroxybutyrates / metabolism; Methylmalonyl-CoA Mutase / chemistry; Methylmalonyl-CoA Mutase / genetics; Methylmalonyl-CoA Mutase / metabolism; Protein Multimerization; Racemases and Epimerases / chemistry; Racemases and Epimerases / genetics; Racemases and Epimerases / metabolism; Recombinant Proteins / genetics; Recombinant Proteins / metabolism; Sulfolobaceae / enzymology; Sulfolobaceae / genetics; Sulfolobaceae / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2012 journal article
Extreme thermophiles: moving beyond single-enzyme biocatalysis
Current Opinion in Chemical Engineering, 1(4), 363–372.
co-author countries:
United States of America 🇺🇸
Sources: Crossref, ORCID
Added: February 24, 2020
2012 journal article
Hyperthermophilic Thermotoga Species Differ with Respect to Specific Carbohydrate Transporters and Glycoside Hydrolases
Applied and Environmental Microbiology, 78(6), 1978–1986.
co-author countries:
United States of America 🇺🇸
MeSH headings : ATP-Binding Cassette Transporters / genetics; ATP-Binding Cassette Transporters / metabolism; Bacterial Typing Techniques; Carbohydrate Metabolism; Gene Expression Profiling; Glycoside Hydrolases / genetics; Glycoside Hydrolases / metabolism; Gram-Negative Anaerobic Straight, Curved, and Helical Rods / classification; Gram-Negative Anaerobic Straight, Curved, and Helical Rods / enzymology; Gram-Negative Anaerobic Straight, Curved, and Helical Rods / genetics; Gram-Negative Anaerobic Straight, Curved, and Helical Rods / metabolism; Microarray Analysis
Sources: Crossref, ORCID
Added: August 3, 2021
2012 journal article
S-Layer Homology Domain Proteins Csac_0678 and Csac_2722 Are Implicated in Plant Polysaccharide Deconstruction by the Extremely Thermophilic Bacterium Caldicellulosiruptor saccharolyticus
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 78(3), 768–777.
co-author countries:
United States of America 🇺🇸
MeSH headings : Enzyme Stability; Glycoside Hydrolases / chemistry; Glycoside Hydrolases / genetics; Glycoside Hydrolases / metabolism; Gram-Positive Bacteria / enzymology; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / metabolism; Hydrogen-Ion Concentration; Membrane Glycoproteins / chemistry; Membrane Glycoproteins / genetics; Membrane Glycoproteins / metabolism; Molecular Weight; Open Reading Frames; Plants / microbiology; Polysaccharides / metabolism; Protein Binding; Sequence Deletion; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018
2012 journal article
Uranium extremophily is an adaptive, rather than intrinsic, feature for extremely thermoacidophilic Metallosphaera species
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 109(41), 16702–16707.
co-author countries:
United States of America 🇺🇸
author keywords: uranium oxidation; uranium resistance; chemolithotrophy; terminal oxidases
MeSH headings : Adaptation, Physiological / drug effects; Adaptation, Physiological / genetics; Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Electrophoresis, Gel, Two-Dimensional; Environmental Pollutants / chemistry; Environmental Pollutants / toxicity; Gene Expression Regulation, Archaeal / drug effects; Mutation; RNA Stability / drug effects; RNA, Archaeal / genetics; RNA, Archaeal / metabolism; Species Specificity; Sulfolobaceae / classification; Sulfolobaceae / genetics; Sulfolobaceae / metabolism; Time Factors; Transcriptome / genetics; Uranium / chemistry; Uranium / toxicity
Sources: Web Of Science, ORCID
Added: August 6, 2018
2011 journal article
A novel alpha-d-galactosynthase from Thermotoga maritima converts beta-d-galactopyranosyl azide to alpha-galacto-oligosaccharides
GLYCOBIOLOGY, 21(4), 448–456.
co-author countries:
Italy 🇮🇹 United States of America 🇺🇸
author keywords: alpha-galacto-oligosaccharides; glycosynthase; alpha-gal epitope; carbohydrate synthesis; protein engineering
MeSH headings : Aspartic Acid / chemistry; Azides / chemistry; Chromatography, Thin Layer; Disaccharides / biosynthesis; Galactose / metabolism; Glycine / chemistry; Kinetics; Mutagenesis, Site-Directed; Mutant Proteins / chemistry; Mutant Proteins / genetics; Mutant Proteins / metabolism; Protein Engineering; Thermotoga maritima / enzymology; alpha-Galactosidase / chemistry; alpha-Galactosidase / genetics; alpha-Galactosidase / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2011 journal article
Complete Genome Sequences for the Anaerobic, Extremely Thermophilic Plant Biomass-Degrading Bacteria Caldicellulosiruptor hydrothermalis , Caldicellulosiruptor kristjanssonii , Caldicellulosiruptor kronotskyensis , Caldicellulosiruptor owensensis , and Caldicellulosiruptor lactoaceticus
Journal of Bacteriology, 193(6), 1483–1484.
co-author countries:
United States of America 🇺🇸
MeSH headings : DNA, Bacterial / chemistry; DNA, Bacterial / genetics; Genetic Variation; Genome, Bacterial; Glycoside Hydrolases / genetics; Gram-Positive Bacteria / genetics; Membrane Transport Proteins / genetics; Molecular Sequence Data; Sequence Analysis, DNA
Sources: Crossref, ORCID
Added: July 21, 2021
2011 journal article
Extremely Thermophilic Routes to Microbial Electrofuels
ACS CATALYSIS, 1(9), 1043–1050.
co-author countries:
United States of America 🇺🇸
Sources: Web Of Science, ORCID
Added: August 6, 2018
2011 journal article
Glycoside Hydrolase Inventory Drives Plant Polysaccharide Deconstruction by the Extremely Thermophilic Bacterium Caldicellulosiruptor saccharolyticus
BIOTECHNOLOGY AND BIOENGINEERING, 108(7), 1559–1569.
co-author countries:
United States of America 🇺🇸
author keywords: Caldicellulosiruptor saccharolyticus; extreme thermophile; plant biomass; glycoside hydrolases
MeSH headings : Bacterial Proteins / chemistry; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Carboxymethylcellulose Sodium / metabolism; Culture Media / chemistry; Gene Expression Profiling; Glycoside Hydrolases / chemistry; Glycoside Hydrolases / genetics; Glycoside Hydrolases / metabolism; Gram-Positive Bacteria / enzymology; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / metabolism; Molecular Weight; Plants / chemistry; Polysaccharides / metabolism; Xylans / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2011 journal article
Insights into plant biomass conversion from the genome of the anaerobic thermophilic bacterium Caldicellulosiruptor bescii DSM 6725
NUCLEIC ACIDS RESEARCH, 39(8), 3240–3254.
co-author countries:
France 🇫🇷 United States of America 🇺🇸
MeSH headings : Bacterial Adhesion; Bacterial Proteins / genetics; Biomass; Carbohydrate Metabolism / genetics; Gene Expression Profiling; Genes, Bacterial; Genome, Bacterial; Genomics; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / metabolism; Gram-Positive Bacteria / ultrastructure; Plants / metabolism; Proteomics
Sources: Web Of Science, ORCID
Added: August 6, 2018
2011 journal article
Starch Self-Processing in Transgenic Sweet Potato Roots Expressing a Hyperthermophilic alpha-Amylase
BIOTECHNOLOGY PROGRESS, 27(2), 351–359.
co-author countries:
United States of America 🇺🇸
author keywords: hyperthermophilic enzymes; starch conversion; transgenic plants; sweet potato; biofuels
MeSH headings : Crops, Agricultural / genetics; Hot Temperature; Ipomoea batatas / genetics; Ipomoea batatas / metabolism; Plant Roots / metabolism; Plants, Genetically Modified / enzymology; Plants, Genetically Modified / metabolism; Southeastern United States; Starch / metabolism; Thermotoga maritima / enzymology; alpha-Amylases / genetics; alpha-Amylases / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2011 journal article
VapC6, a ribonucleolytic toxin regulates thermophilicity in the crenarchaeote Sulfolobus solfataricus
RNA, 17(7), 1381–1392.
author keywords: antitoxin; RNA degradation; heat shock; archaea; transcription
MeSH headings : Adaptation, Physiological / genetics; Adaptation, Physiological / physiology; Cell Line; Gene Expression Profiling; Gene Expression Regulation, Archaeal; Hydrolysis / drug effects; Models, Biological; RNA / drug effects; RNA / metabolism; Sulfolobus solfataricus / genetics; Sulfolobus solfataricus / metabolism; Sulfolobus solfataricus / physiology; Temperature; Toxins, Biological / genetics; Toxins, Biological / metabolism; Toxins, Biological / pharmacology; Toxins, Biological / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2010 chapter
Enzymes, Extremely Thermophilic
In M. C. Flickinger (Ed.), Encyclopedia of Industrial Biotechnology.
co-author countries:
United States of America 🇺🇸
Ed(s): M. Flickinger
Sources: Crossref, ORCID
Added: August 3, 2021
2010 chapter
Extremely thermophilic microorganisms
In M. C. Flickinger (Ed.), Encyclopedia of Industrial Biotechnology: Bioprocess, Bioseparation, and Cell Technology (2nd ed., Vol. 5, pp. 3481–3499). NY: John Wiley and Sons.
Ed(s): M. Flickinger
Source: NC State University Libraries
Added: August 27, 2021
2010 entry reference
Extremophiles
(I. T. Horváth, Ed.).
co-author countries:
United States of America 🇺🇸
Ed(s): I. Horváth
Sources: Crossref, ORCID, NC State University Libraries
Added: July 14, 2021
2010 journal article
Impact of Molecular Hydrogen on Chalcopyrite Bioleaching by the Extremely Thermoacidophilic Archaeon Metallosphaera sedula
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 76(8), 2668–2672.
co-author countries:
United States of America 🇺🇸
MeSH headings : Archaeal Proteins / biosynthesis; Copper / metabolism; Electron Transport Chain Complex Proteins / biosynthesis; Gene Expression Profiling; Hydrogen / metabolism; Sulfolobaceae / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2010 journal article
N-terminal Fusion of a Hyperthermophilic Chitin-Binding Domain to Xylose Isomerase from Thermotoga neapolitana Enhances Kinetics and Thermostability of Both Free and Immobilized Enzymes
BIOTECHNOLOGY PROGRESS, 26(4), 993–1000.
co-author countries:
United States of America 🇺🇸
author keywords: xylose isomerase; hyperthermophile; Thermotoga neapolitana; chitin-binding domain
MeSH headings : Aldose-Ketose Isomerases / genetics; Aldose-Ketose Isomerases / metabolism; Chitin / metabolism; Enzyme Stability; Enzymes, Immobilized / genetics; Enzymes, Immobilized / metabolism; Kinetics; Protein Binding; Protein Structure, Tertiary / genetics; Protein Structure, Tertiary / physiology; Recombinant Proteins / genetics; Recombinant Proteins / metabolism; Thermotoga neapolitana / enzymology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2010 journal article
Part I: characterization of the extracellular proteome of the extreme thermophile Caldicellulosiruptor saccharolyticus by GeLC-MS2
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 398(1), 377–389.
co-author countries:
United States of America 🇺🇸
author keywords: Secretome; Caldicellulosiruptor saccharolyticus; GeLC-MS2; Thermophile; Sample preparation
MeSH headings : Bacterial Proteins / analysis; Bacterial Proteins / metabolism; Chromatography, Liquid; Electrophoresis, Polyacrylamide Gel; Extracellular Space / metabolism; Gram-Positive Bacteria / metabolism; Proteome / analysis; Spectrometry, Mass, Electrospray Ionization; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018
2010 article
Part I: characterization of the extracellular proteome of the extreme thermophile Caldicellulosiruptor saccharolyticus by GeLC-MS2 (vol 398, pg 377, 2010)
Andrews, G., Lewis, D., Notey, J., Kelly, R., & Muddiman, D. (2010, October). ANALYTICAL AND BIOANALYTICAL CHEMISTRY, Vol. 398, pp. 1837–1837.
co-author countries:
United States of America 🇺🇸
Sources: Web Of Science, ORCID
Added: August 6, 2018
2010 journal article
Part II: defining and quantifying individual and co-cultured intracellular proteomes of two thermophilic microorganisms by GeLC-MS2 and spectral counting
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 398(1), 391–404.
co-author countries:
United States of America 🇺🇸
author keywords: Thermotoga maritima; Caldicellulosiruptor saccharolyticus; GeLC-MS2; Co-cultivation; Intracellular proteome; Spectral counting
MeSH headings : Bacterial Proteins / analysis; Bacterial Proteins / metabolism; Chemotaxis; Chromatography, Liquid; Coculture Techniques; Electrophoresis, Polyacrylamide Gel; Fourier Analysis; Gram-Positive Bacteria / growth & development; Gram-Positive Bacteria / metabolism; Intracellular Space / metabolism; Proteome / analysis; Spectrometry, Mass, Electrospray Ionization; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Spectrum Analysis / statistics & numerical data; Temperature; Thermotoga maritima / growth & development; Thermotoga maritima / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2010 article
Part II: defining and quantifying individual and co-cultured intracellular proteomes of two thermophilic microorganisms by GeLC-MS2 and spectral counting (vol 398, pg 391, 2010)
Andrews, G., Lewis, D., Notey, J., Kelly, R., & Muddiman, D. (2010, October). ANALYTICAL AND BIOANALYTICAL CHEMISTRY, Vol. 398, pp. 1839–1839.
co-author countries:
United States of America 🇺🇸
Sources: Web Of Science, ORCID
Added: August 6, 2018
2010 journal article
Phylogenetic, Microbiological, and Glycoside Hydrolase Diversities within the Extremely Thermophilic, Plant Biomass-Degrading Genus Caldicellulosiruptor
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 76(24), 8084–8092.
co-author countries:
United States of America 🇺🇸
MeSH headings : Bacterial Proteins / analysis; Biomass; Carbohydrate Metabolism; Cluster Analysis; DNA, Bacterial / chemistry; DNA, Bacterial / genetics; DNA, Ribosomal / chemistry; DNA, Ribosomal / genetics; Electrophoresis, Gel, Two-Dimensional; Genetic Variation; Glycoside Hydrolases / genetics; Gram-Positive Bacteria / classification; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / growth & development; Gram-Positive Bacteria / metabolism; Hot Temperature; Microarray Analysis; Molecular Sequence Data; Nucleic Acid Hybridization; Phylogeny; Plants / microbiology; Proteome / analysis; RNA, Ribosomal, 16S / genetics; Sequence Analysis, DNA
Sources: Web Of Science, ORCID
Added: August 6, 2018
2010 journal article
Physiological Versatility of the Extremely Thermoacidophilic Archaeon Metallosphaera sedula Supported by Transcriptomic Analysis of Heterotrophic, Autotrophic, and Mixotrophic Growth
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 76(3), 931–935.
co-author countries:
United States of America 🇺🇸
MeSH headings : Aerobiosis / genetics; Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Autotrophic Processes; Carbon Dioxide / metabolism; Carbon Isotopes; Gene Expression Profiling; Gene Expression Regulation, Archaeal; Heterotrophic Processes; Hot Temperature; Hydroxybutyrates / metabolism; Oligonucleotide Array Sequence Analysis; Substrate Specificity / genetics; Sulfolobaceae / genetics; Sulfolobaceae / growth & development; Sulfolobaceae / metabolism; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018
2010 journal article
The genus Thermotoga: recent developments
ENVIRONMENTAL TECHNOLOGY, 31(10), 1169–1181.
co-author countries:
United States of America 🇺🇸
author keywords: Thermotoga; extreme thermophiles; genomics; microbial physiology
MeSH headings : Biofilms; Carbohydrate Metabolism / genetics; Genome, Bacterial; Genomics; RNA, Ribosomal, 16S / genetics; Thermotoga maritima / enzymology; Thermotoga maritima / genetics; Thermotoga maritima / metabolism; Thermotoga maritima / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2009 journal article
Carbohydrate Utilization Patterns for the Extremely Thermophilic Bacterium Caldicellulosiruptor saccharolyticus Reveal Broad Growth Substrate Preferences
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 75(24), 7718–7724.
co-author countries:
Netherlands 🇳🇱 United States of America 🇺🇸
MeSH headings : ATP-Binding Cassette Transporters / genetics; ATP-Binding Cassette Transporters / metabolism; Biofuels; Biological Transport; Carbohydrate Metabolism; Gene Expression Profiling; Genes, Bacterial; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / growth & development; Lignin / metabolism; Monosaccharides / metabolism; Oligonucleotide Array Sequence Analysis
Sources: Web Of Science, ORCID
Added: August 6, 2018
2009 journal article
Integrating modern biology into the ChE DNA through a campus-wide core laboratory education program
Chemical Engineering Education, 43(4), 257–264.
Source: NC State University Libraries
Added: September 6, 2021
2009 journal article
Plant cell calcium-rich environment enhances thermostability of recombinantly produced α-amylase from the hyperthermophilic bacterium Thermotoga maritime
Biotechnology and Bioengineering, 104(5), 947–956.
co-author countries:
United States of America 🇺🇸
author keywords: hyperthermophilic enzymes; starch processing; transgenic plants; tobacco NT1 Cell cultures; biofuel
MeSH headings : Calcium / pharmacology; Coenzymes / pharmacology; Enzyme Stability; Escherichia coli / enzymology; Escherichia coli / genetics; Hot Temperature; Plants, Genetically Modified / enzymology; Recombinant Proteins / chemistry; Recombinant Proteins / genetics; Recombinant Proteins / metabolism; Thermotoga maritima / enzymology; Thermotoga maritima / genetics; Tobacco / enzymology; Tobacco / genetics; alpha-Amylases / chemistry; alpha-Amylases / genetics; alpha-Amylases / metabolism
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2009 journal article
Role of vapBC toxin–antitoxin loci in the thermal stress response of Sulfolobus solfataricus
Biochemical Society Transactions, 37(1), 123–126.
co-author countries:
United States of America 🇺🇸
author keywords: archaeon; heat shock; hyperthermophile; stress response; Sulfolobus solfataricus; toxin-antioxin locus
MeSH headings : Antitoxins / metabolism; Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Genome, Archaeal / genetics; Heat-Shock Response; Stress, Physiological; Sulfolobus solfataricus / genetics; Sulfolobus solfataricus / metabolism; Temperature; Toxins, Biological / genetics; Toxins, Biological / metabolism
Sources: Crossref, ORCID
Added: August 28, 2020
2009 journal article
Temperature, not LuxS, mediates AI-2 formation in hydrothermal habitats
FEMS MICROBIOLOGY ECOLOGY, 68(2), 173–181.
co-author countries:
United States of America 🇺🇸
author keywords: autoinducer-2; AI-2; hyperthermophiles; hydrothermal environments; Thermotoga maritima; Pyrococcus furiosus
MeSH headings : Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Carbon-Sulfur Lyases / genetics; Carbon-Sulfur Lyases / metabolism; Gas Chromatography-Mass Spectrometry; Gene Expression Regulation, Bacterial; Homoserine / analogs & derivatives; Homoserine / biosynthesis; Hot Temperature; Lactones; Pyrococcus furiosus / genetics; Pyrococcus furiosus / metabolism; Quorum Sensing; Thermotoga maritima / genetics; Thermotoga maritima / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2008 review
Extremely thermophilic microorganisms for biomass conversion: status and prospects
[Review of ]. CURRENT OPINION IN BIOTECHNOLOGY, 19(3), 210–217.
co-author countries:
United States of America 🇺🇸
MeSH headings : Archaea / classification; Archaea / genetics; Archaea / metabolism; Bacteria / classification; Bacteria / genetics; Bacteria / metabolism; Bioelectric Energy Sources; Biomass; Biotechnology / trends; Carbohydrate Metabolism; Cellulase / metabolism; Cellulose / metabolism; Energy-Generating Resources; Hot Temperature; Marine Biology; Phylogeny
Sources: Web Of Science, ORCID
Added: August 6, 2018
2008 chapter
Functional Genomics of Stress Response in Extremophilic Archaea
In P. Blum (Ed.), Archaea: New Models for Prokaryotic Biology. Norfolk, UK: Caister Academic Press.
Ed(s): P. Blum
Source: NC State University Libraries
Added: September 9, 2021
2008 journal article
Functional-genomics-based identification and characterization of open reading frames encoding alpha-glucoside-processing enzymes in the hyperthermophilic archaeon Pyrococcus furiosus
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 74(4), 1281–1283.
co-author countries:
United States of America 🇺🇸
MeSH headings : Computational Biology; Gene Expression Regulation, Bacterial / genetics; Genomics / methods; Open Reading Frames / genetics; Pyrococcus furiosus / enzymology; Pyrococcus furiosus / genetics; alpha-Glucosidases / genetics; beta-Amylase / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018
2008 review
Hydrogenesis in hyperthermophilic microorganisms: Implications for biofuels
[Review of ]. METABOLIC ENGINEERING, 10(6), 394–404.
co-author countries:
United States of America 🇺🇸
author keywords: Biohydrogen; Pyrococcus furiosus; Thermotoga maritima; Caldicellulosiruptor saccharolyticus; Hyperthermophiles; Hydrogenases
MeSH headings : Archaea / metabolism; Bioelectric Energy Sources; Hot Temperature; Hydrogen / metabolism; Hydrogen Sulfide / metabolism; Methane / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2008 journal article
Hydrogenomics of the Extremely Thermophilic Bacterium Caldicellulosiruptor saccharolyticus
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 74(21), 6720–6729.
co-author countries:
Netherlands 🇳🇱 Sweden 🇸🇪 United States of America 🇺🇸
MeSH headings : Bacterial Proteins / genetics; Carbohydrate Metabolism / genetics; DNA, Bacterial / chemistry; DNA, Bacterial / genetics; Enzymes / genetics; Gene Expression Profiling; Genome, Bacterial; Gram-Positive Bacteria / genetics; Metabolic Networks and Pathways / genetics; Molecular Sequence Data; Sequence Analysis, DNA
Sources: Web Of Science, ORCID
Added: August 6, 2018
2008 journal article
Identification of Components of Electron Transport Chains in the Extremely Thermoacidophilic Crenarchaeon Metallosphaera sedula through Iron and Sulfur Compound Oxidation Transcriptomes
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 74(24), 7723–7732.
co-author countries:
United States of America 🇺🇸
MeSH headings : Archaeal Proteins / biosynthesis; Archaeal Proteins / genetics; Electron Transport Chain Complex Proteins / biosynthesis; Electron Transport Chain Complex Proteins / genetics; Ferrous Compounds / metabolism; Gene Expression Profiling; Genes, Archaeal; Iron-Sulfur Proteins / biosynthesis; Iron-Sulfur Proteins / genetics; Multigene Family; Oxidation-Reduction; Oxidoreductases / biosynthesis; Oxidoreductases / genetics; Sulfolobaceae / enzymology; Sulfolobaceae / genetics; Sulfolobaceae / metabolism; Sulfur / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2008 review
Life in hot acid: Pathway analyses in extremely thermoacidophilic archaea
[Review of ]. CURRENT OPINION IN BIOTECHNOLOGY, 19(5), 445–453.
co-author countries:
United States of America 🇺🇸
MeSH headings : Acids / metabolism; Archaea / physiology; Archaeal Proteins / metabolism; Cell Survival; Ecosystem; Hot Temperature; Hydrogen-Ion Concentration; Models, Biological; Signal Transduction / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2008 journal article
Microwave activation of enzymatic catalysis
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 130(31), 10048-+.
co-author countries:
United States of America 🇺🇸
MeSH headings : Carboxylesterase / metabolism; Catalysis; Enzymes / metabolism; Hot Temperature; Kinetics; Microwaves; Pyrococcus furiosus / enzymology; Sulfolobus solfataricus / enzymology; Thermotoga maritima / enzymology; alpha-Galactosidase / metabolism; beta-Glucosidase / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2008 journal article
Polysaccharide Degradation and Synthesis by Extremely Thermophilic Anaerobes
Annals of the New York Academy of Sciences, 1125(1), 322–337.
co-author countries:
United States of America 🇺🇸
author keywords: Pyrococcus furiosus; Thermotoga maritima; Caldicellulosiruptor saccharolyticus; extremely thermophilic organism; thermophile; glycoside hydrolases; exopolysaccharides
MeSH headings : Anaerobiosis; Archaeal Proteins / metabolism; Bacterial Proteins / metabolism; Biological Transport; Carbohydrate Metabolism; Glycoside Hydrolases / metabolism; Hot Temperature; Polysaccharides / biosynthesis; Polysaccharides / metabolism; Pyrococcus furiosus / growth & development; Pyrococcus furiosus / metabolism; Thermotoga maritima / growth & development; Thermotoga maritima / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2008 journal article
Probing the stability of native and activated forms of alpha(2)-macroglobulin
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 42(1), 62–67.
co-author countries:
United States of America 🇺🇸
author keywords: alpha M-2; alpha(2)-macroglobulin; alpha(2)-macroglobulin and proteinase incorporation; alpha(2)-macroglobulin and norproteolytic incorporation of lysozyme; alpha(2)-macroglobulin stabilization
MeSH headings : Amino Acid Sequence; Animals; Hot Temperature; Humans; Ligands; Molecular Sequence Data; Peptide Hydrolases / chemistry; Protein Conformation; Transition Temperature; alpha-Macroglobulins / chemistry
Sources: Web Of Science, ORCID
Added: August 6, 2018
2008 journal article
The genome sequence of the metal-mobilizing, extremely thermoacidophilic archaeon Metallosphaera sedula provides insights into bioleaching-associated metabolism
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 74(3), 682–692.
co-author countries:
United States of America 🇺🇸
MeSH headings : Amino Acid Sequence; Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Gene Expression Regulation, Archaeal; Genome, Archaeal; Hot Temperature; Iron / metabolism; Molecular Sequence Data; Oligonucleotide Array Sequence Analysis; Oxidation-Reduction; Sequence Analysis, DNA; Sulfates / metabolism; Sulfolobaceae / classification; Sulfolobaceae / genetics; Sulfolobaceae / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 chapter
Archaeal 20S Proteasome: A Simple and Thermostable Model System for the Core Particle
In F. Robb, G. Antranikian, D. Grogan, & A. Driessen (Eds.), Thermophiles (pp. 347–360).
Ed(s): F. Robb, G. Antranikian, D. Grogan & A. Driessen
Sources: Crossref, ORCID
Added: August 3, 2021
2007 journal article
Biochemical analysis of Thermotoga maritima GH36 alpha-galactosidase (TmGalA) confirms the mechanistic commonality of clan GH-D glycoside hydrolases
BIOCHEMISTRY, 46(11), 3319–3330.
co-author countries:
Russian Federation 🇷🇺 Sweden 🇸🇪 United States of America 🇺🇸
MeSH headings : Amino Acid Sequence; Azides / pharmacology; Catalysis; Cloning, Molecular; Hot Temperature; Hydrogen-Ion Concentration; Kinetics; Models, Molecular; Molecular Sequence Data; Mutagenesis, Site-Directed; Protein Denaturation; Sequence Alignment; Substrate Specificity; Thermotoga maritima / enzymology; Thermotoga maritima / genetics; alpha-Galactosidase / drug effects; alpha-Galactosidase / genetics; alpha-Galactosidase / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 chapter
Biochemical/Biomolecular engineering
In McGraw-Hill encyclopedia of science & technology (10th ed.). New York: McGraw-Hill.
Source: NC State University Libraries
Added: September 9, 2021
2007 chapter
Functional Genomics
In R. Cavicchioli (Ed.), Archaea: Molecular and Cellular Biology (pp. 434–462).
co-author countries:
United States of America 🇺🇸
Ed(s): R. Cavicchioli
Sources: NC State University Libraries, ORCID
Added: July 27, 2021
2007 journal article
Impact of substrate glycoside linkage. and elemental sulfur on bioenergetics, of and hydrogen production by the hyperthermophilic Archaeon Pyrococcus furiosus
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 73(21), 6842–6853.
co-author countries:
United States of America 🇺🇸
MeSH headings : Archaea; Chemical Phenomena; Chemistry; Gene Expression Regulation, Archaeal; Genome, Archaeal; Glycosides / metabolism; Hot Temperature; Hydrogen / metabolism; Oligonucleotide Array Sequence Analysis; Open Reading Frames; Pyrococcus furiosus / enzymology; Pyrococcus furiosus / genetics; Pyrococcus furiosus / physiology; Sulfur / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Responses of wild-type and resistant strains of the hyperthermophilic bacterium Thermotoga maritima to chloramphenicol challenge
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 73(15), 5058–5065.
co-author countries:
United States of America 🇺🇸
MeSH headings : Anti-Bacterial Agents / pharmacology; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Base Sequence; Chloramphenicol / pharmacology; Drug Resistance, Bacterial / genetics; Gene Expression Profiling; Gene Expression Regulation, Bacterial; Hot Temperature; Microbial Sensitivity Tests; Molecular Sequence Data; Oligonucleotide Array Sequence Analysis; Point Mutation; Proteome; RNA, Ribosomal, 23S / genetics; Thermotoga maritima / drug effects; Thermotoga maritima / genetics; Thermotoga maritima / growth & development; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Rheological properties of guar galactomannan solutions during hydrolysis with galactomannanase and alpha-galactosidase enzyme mixtures
BIOMACROMOLECULES, 8(3), 949–956.
co-author countries:
United States of America 🇺🇸
MeSH headings : Carbohydrate Conformation; Galactans / metabolism; Galactose / analogs & derivatives; Hydrogen-Ion Concentration; Hydrolysis; Kinetics; Mannans / chemistry; Mannans / metabolism; Mannose / chemistry; Mannosidases / chemistry; Models, Chemical; Models, Statistical; Plant Gums / metabolism; Polysaccharides / chemistry; Rheology / methods; Time Factors; alpha-Galactosidase / chemistry
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Role of the beta 1 subunit in the function and stability of the 20S proteasome in the hyperthermophilic archaeon Pyrococcus furiosus
JOURNAL OF BACTERIOLOGY, 189(2), 583–590.
co-author countries:
United States of America 🇺🇸
MeSH headings : Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Archaeal Proteins / physiology; Calorimetry, Differential Scanning; Genome, Archaeal; Hot Temperature; Molecular Chaperones / genetics; Molecular Chaperones / metabolism; Proteasome Endopeptidase Complex / genetics; Proteasome Endopeptidase Complex / metabolism; Proteasome Endopeptidase Complex / physiology; Protein Subunits / genetics; Protein Subunits / metabolism; Protein Subunits / physiology; Pyrococcus furiosus / genetics; Pyrococcus furiosus / metabolism; Temperature; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 chapter
Transcriptomics, Proteomics, and Structural Genomics ofPyrococcus Furiosus
In Archaea (pp. 239–246).
Sources: Crossref, ORCID
Added: July 21, 2021
2006 journal article
Colocation of genes encoding a tRNA-mRNA hybrid and a putative signaling peptide on complementary strands in the genome of the hyperthermophilic bacterium Thermotoga maritima
JOURNAL OF BACTERIOLOGY, 188(19), 6802–6807.
co-author countries:
United States of America 🇺🇸
MeSH headings : Amino Acid Sequence; Anti-Bacterial Agents / pharmacology; Chloramphenicol / pharmacology; Coculture Techniques; DNA, Bacterial / genetics; Gene Expression; Gene Expression Regulation, Bacterial; Genes, Bacterial; Genome, Bacterial; Intracellular Signaling Peptides and Proteins / genetics; Methanococcus; RNA, Bacterial / analysis; RNA, Bacterial / genetics; RNA, Messenger / analysis; RNA, Messenger / genetics; Reverse Transcriptase Polymerase Chain Reaction; Sequence Alignment; Synteny; Thermotoga maritima / genetics; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018
2006 journal article
Dynamic metabolic adjustments and genome plasticity are implicated in the heat shock response of the extremely thermoacidophilic Archaeon Sulfolobus solfataricus
JOURNAL OF BACTERIOLOGY, 188(12), 4553–4559.
co-author countries:
United States of America 🇺🇸
MeSH headings : Antitoxins / genetics; Antitoxins / metabolism; Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Heat-Shock Response; Hot Temperature; Hydrogen-Ion Concentration; RNA, Archaeal / genetics; RNA, Messenger / genetics; Sulfolobus solfataricus / metabolism; Sulfolobus solfataricus / physiology; Time Factors; Toxins, Biological / genetics; Toxins, Biological / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2006 journal article
Global analysis of carbohydrate utilization by Lactobacillus acidophilus using cDNA microarrays
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103(10), 3816–3821.
co-author countries:
United Kingdom of Great Britain and Northern Ireland 🇬🇧 Italy 🇮🇹 United States of America 🇺🇸
author keywords: ATP-binding cassette; carbon catabolite repression; fructooligosaccharide; galactoside-pentose hexuronide
MeSH headings : ATP-Binding Cassette Transporters / genetics; ATP-Binding Cassette Transporters / metabolism; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Carbohydrate Metabolism / genetics; Gastrointestinal Tract / microbiology; Gene Expression Profiling; Genes, Bacterial; Humans; Lactobacillus acidophilus / genetics; Lactobacillus acidophilus / metabolism; Models, Biological; Oligonucleotide Array Sequence Analysis; Phosphoenolpyruvate Sugar Phosphotransferase System / genetics; Reverse Transcriptase Polymerase Chain Reaction
Sources: Web Of Science, ORCID
Added: August 6, 2018
2006 journal article
Identification of Eggshell Membrane Proteins and Purification of Ovotransferrin and β-NAGase from Hen Egg White
The Protein Journal, 25(1), 71–81.
co-author countries:
United States of America 🇺🇸
author keywords: beta-N-acetylglucosaminidase; ovotransferrin; isoelectric focusing; SDS-PAGE; eggshell membrane; hen egg white
MeSH headings : Acetylglucosaminidase / analysis; Acetylglucosaminidase / isolation & purification; Animals; Anti-Bacterial Agents / analysis; Chickens; Chromatography, Ion Exchange; Conalbumin / analysis; Conalbumin / isolation & purification; Egg Proteins / chemistry; Electrophoresis, Polyacrylamide Gel; Isoelectric Focusing; Membrane Proteins / chemistry; Muramidase / analysis; Ovum / chemistry; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018
2006 review
Microbial biochemistry, physiology, and biotechnology of hyperthermophilic Thermotoga species
[Review of ]. FEMS MICROBIOLOGY REVIEWS, 30(6), 872–905.
co-author countries:
United States of America 🇺🇸
author keywords: Thermotoga; hyperthermophiles; functional genomics
MeSH headings : Bacterial Proteins / chemistry; Bacterial Proteins / metabolism; Bacterial Proteins / physiology; Biotechnology; Carbohydrate Metabolism; Genetic Variation; Genome, Bacterial; Genomics; Gram-Negative Anaerobic Straight, Curved, and Helical Rods / genetics; Gram-Negative Anaerobic Straight, Curved, and Helical Rods / physiology; Hot Temperature; Iron / metabolism; Monosaccharides / biosynthesis; Phylogeny; Polysaccharides / biosynthesis; Signal Transduction; Sulfur / metabolism; Thermotoga maritima / genetics; Thermotoga maritima / isolation & purification; Thermotoga maritima / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2006 journal article
The Thermotoga maritima phenotype is impacted by syntrophic interaction with Methanococcus jannaschii in hyperthermophilic coculture
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 72(1), 811–818.
co-author countries:
United States of America 🇺🇸
MeSH headings : Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Coculture Techniques; DNA, Complementary; Gene Expression Profiling; Gene Expression Regulation, Bacterial; Hot Temperature; Methanococcus / growth & development; Oligonucleotide Array Sequence Analysis; Phenotype; Proteome; Thermotoga maritima / classification; Thermotoga maritima / genetics; Thermotoga maritima / growth & development; Thermotoga maritima / metabolism; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018
2006 journal article
Transcriptional and biochemical analysis of starch metabolism in the hyperthermophilic archaeon Pyrococcus furiosus
JOURNAL OF BACTERIOLOGY, 188(6), 2115–2125.
co-author countries:
United States of America 🇺🇸
MeSH headings : Archaeal Proteins / genetics; Bacterial Proteins / genetics; DNA, Archaeal / chemistry; DNA, Archaeal / genetics; Gene Expression Profiling; Gene Expression Regulation, Archaeal; Glucose / metabolism; Glucosephosphates / metabolism; Glucosyltransferases / genetics; Glycogen Debranching Enzyme System / genetics; Glycoside Hydrolases / genetics; Monosaccharide Transport Proteins / genetics; Oligonucleotide Array Sequence Analysis; Pyrococcus furiosus / genetics; Pyrococcus furiosus / metabolism; Sequence Analysis, DNA; Starch / metabolism; Substrate Specificity
Sources: Web Of Science, ORCID
Added: August 6, 2018
2005 journal article
Aflatoxin conducive and non-conducive growth conditions reveal new gene associations with aflatoxin production
FUNGAL GENETICS AND BIOLOGY, 42(6), 506–518.
co-author countries:
United States of America 🇺🇸
author keywords: aflatoxin; gene expression; regulation; Aspergillus flavus; Aspergillus parasiticus
MeSH headings : Aflatoxins / biosynthesis; Aspergillus / genetics; Aspergillus / metabolism; Gene Expression; Gene Expression Profiling; Gene Expression Regulation, Fungal; Genes, Fungal; Hydrogen-Ion Concentration; Nitrogen / metabolism; Oligonucleotide Array Sequence Analysis; RNA, Fungal / analysis; RNA, Messenger / analysis; Regulon; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018
2005 journal article
An expression-driven approach to the prediction of carbohydrate transport and utilization regulons in the hyperthermophilic bacterium Thermotoga maritima
JOURNAL OF BACTERIOLOGY, 187(21), 7267–7282.
co-author countries:
United States of America 🇺🇸
MeSH headings : 5' Flanking Region / genetics; ATP-Binding Cassette Transporters / chemistry; ATP-Binding Cassette Transporters / genetics; Biological Evolution; Biological Transport / genetics; Carbohydrate Metabolism; Computational Biology; Gene Duplication; Gene Expression Profiling; Genes, Bacterial; Genes, Regulator; Genomics; Monosaccharide Transport Proteins / genetics; Nucleic Acid Conformation; Oligosaccharides / metabolism; Pentose Phosphate Pathway / genetics; Regulon / physiology; Rhamnose / metabolism; Thermotoga maritima / genetics; Thermotoga maritima / metabolism; Xylose / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2005 patent
Compositions for fracturing subterranean formations
Washington, DC: U.S. Patent and Trademark Office.
Source: NC State University Libraries
Added: August 6, 2018
2005 journal article
Denaturation and aggregation of three alpha-lactalbumin preparations at neutral pH
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 53(8), 3182–3190.
co-author countries:
United States of America 🇺🇸
author keywords: alpha-lactalbumin; whey proteins; denaturation and aggregation
MeSH headings : Calorimetry, Differential Scanning; Chemical Phenomena; Chemistry, Physical; Dimerization; Electrophoresis, Polyacrylamide Gel; Hot Temperature; Hydrogen-Ion Concentration; Lactalbumin / chemistry; Nephelometry and Turbidimetry; Protein Denaturation
Sources: Web Of Science, ORCID
Added: August 6, 2018
2005 journal article
Genorne-wide transcriptional variation within and between steady states for continuous growth of the hyperthermophile Thermotoga maritima
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 71(9), 5572–5576.
co-author countries:
United States of America 🇺🇸
Sources: Web Of Science, ORCID
Added: August 6, 2018
2005 journal article
Influence of divalent cations on the structural thermostability and thermal inactivation kinetics of class II xylose isomerases
FEBS JOURNAL, 272(6), 1454–1464.
co-author countries:
United States of America 🇺🇸
author keywords: inactivation kinetics; metal cofactors; thermostability; xylose isomerases
MeSH headings : Aldose-Ketose Isomerases / antagonists & inhibitors; Aldose-Ketose Isomerases / chemistry; Aldose-Ketose Isomerases / metabolism; Bacillus / enzymology; Bacterial Proteins / antagonists & inhibitors; Bacterial Proteins / chemistry; Bacterial Proteins / metabolism; Cations, Divalent / pharmacology; Cobalt / pharmacology; Enzyme Stability; Escherichia coli / enzymology; Kinetics; Magnesium / pharmacology; Manganese / pharmacology; Protein Denaturation; Recombinant Proteins / antagonists & inhibitors; Recombinant Proteins / chemistry; Recombinant Proteins / metabolism; Thermodynamics; Thermotoga maritima / enzymology
Sources: Web Of Science, ORCID
Added: August 6, 2018
2005 journal article
Population density-dependent regulation of exopolysaccharide formation in the hyperthermophilic bacterium Thermotoga maritima
MOLECULAR MICROBIOLOGY, 55(3), 664–674.
co-author countries:
United States of America 🇺🇸
MeSH headings : Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Culture Media; Ecosystem; Gene Expression Profiling; Gene Expression Regulation, Bacterial; Genome, Archaeal; Genome, Bacterial; Methanococcus / genetics; Methanococcus / growth & development; Methanococcus / metabolism; Oligonucleotide Array Sequence Analysis; Polysaccharides, Bacterial / metabolism; Signal Transduction; Temperature; Thermotoga maritima / growth & development; Thermotoga maritima / metabolism; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018
2004 chapter
Applications of Genomic Data: Enzyme Discovery and Microbial Genomics
In C. M. Fraser, T. Read, & K. E. Nelson (Eds.), Microbial Genomics. Totowa, NJ: Humana Press, Inc.
Ed(s): C. Fraser, T. Read & K. Nelson
Source: NC State University Libraries
Added: September 11, 2021
2004 chapter
Expression of Extremophilic Proteins
In F. Baneyx (Ed.), Expression Technologies: Current Status and Future Trends. Horizon Scientific.
Ed(s): F. Baneyx
Source: NC State University Libraries
Added: September 11, 2021
2004 article
Functional genomics-based studies of the microbial ecology of hyperthermophilic micro-organisms
Johnson, M. R., Montero, C. I., Conners, S. B., Shockley, K. R., Pysz, M. A., & Kelly, R. M. (2004, April). BIOCHEMICAL SOCIETY TRANSACTIONS, Vol. 32, pp. 188–192.
co-author countries:
United States of America 🇺🇸
author keywords: ecology; functional qenomics; hyperthermophile; microarray; mixed culture
MeSH headings : Biofilms; DNA, Complementary / metabolism; Ecology; Gene Transfer Techniques; Genes, Archaeal; Genome; Genome, Archaeal; Microscopy, Fluorescence; Oligonucleotide Array Sequence Analysis; Phylogeny; RNA, Ribosomal, 16S / genetics; Temperature
Sources: Web Of Science, ORCID
Added: August 6, 2018
2004 chapter
Pyrococcus furiosus Protease I (PfpI)
In F. Woessner, N. Rawlings, & A. Barrett (Eds.), Handbook of Proteolytic Enzymes (pp. 1393–1395). London: Academic Press Limited.
Ed(s): F. Woessner, N. Rawlings & A. Barrett
Source: NC State University Libraries
Added: September 11, 2021
2004 chapter
Significance of polysaccharides in microbial physiology and the ecology of hydrothermal vent environments
In W. S. D. Wilcock, E. F. DeLong, D. S. Kelley, J. A. Baross, & S. C. Cary (Eds.), The Subseafloor Biosphere at Mid-Ocean Ridges (pp. 213–226). Washington, DC: American Geophysical Union.
Ed(s): W. Wilcock, E. DeLong, D. Kelley, J. Baross & S. Cary
Source: NC State University Libraries
Added: September 9, 2021
2004 journal article
Strategic biocatalysis with hyperthermophilic enzymes
Green Chemistry, 6(9), 459.