Works (78)

Updated: September 6th, 2023 05:04

2023 article

Analysis of Gene Expression Differences Between Eastern and Western Loblolly Pine Seed Sources

Festa, A. R., & Whetten, R. (2023, April 28).

By: A. Festa n & R. Whetten n

co-author countries: United States of America 🇺🇸
Source: ORCID
Added: April 29, 2023

2023 journal article

Genomic Tools in Applied Tree Breeding Programs: Factors to Consider

FORESTS, 14(2).

By: R. Whetten n, K. Jayawickrama*, W. Cumbie & G. Martins

co-author countries: United States of America 🇺🇸
author keywords: applied tree breeding; forest products; forest tree genomics
Sources: ORCID, Web Of Science
Added: January 18, 2023

2023 article

Transcriptomic Prediction of Breeding Values in Loblolly Pine

Festa, A. R., & Whetten, R. (2023, March 24).

By: A. Festa n & R. Whetten n

co-author countries: United States of America 🇺🇸
Source: ORCID
Added: March 25, 2023

2023 journal article

Two pathogen loci determine Blumeria graminis

New Phytologist, 238(4), 1546–1561.

co-author countries: Germany 🇩🇪 United Kingdom of Great Britain and Northern Ireland 🇬🇧 United States of America 🇺🇸
author keywords: Blumeria graminis; effector; genome-wide association study; host resistance; powdery mildew; Triticum aestivum; wheat
MeSH headings : Triticum / microbiology; Virulence / genetics; Genome-Wide Association Study; Plant Diseases / microbiology; Disease Resistance / genetics
Sources: ORCID, Web Of Science, Crossref
Added: March 19, 2023

2021 journal article

A genome‐wide SNP genotyping resource for tropical pine tree species

Molecular Ecology Resources, 22(2), 695–710.

By: C. Jackson n, N. Christie*, S. Reynolds*, G. Marais*, Y. Tii‐kuzu*, M. Caballero*, T. Kampman*, E. Visser* ...

co-author countries: United States of America 🇺🇸 South Africa 🇿🇦
author keywords: genotyping array; molecular breeding; Pitro50K; SNP; tropical pines
Sources: Web Of Science, ORCID, Crossref
Added: September 7, 2021

2021 review

Breeding for Climate Change Resilience: A Case Study of Loblolly Pine (Pinus taeda L.) in North America

[Review of ]. FRONTIERS IN PLANT SCIENCE, 12.

By: L. Matallana-Ramirez n, R. Whetten n, G. Sanchez n & K. Payn n

co-author countries: United States of America 🇺🇸
author keywords: abiotic stress; drought; cold; loblolly pine; tree breeding; tree physiology; conifer genomics; climate change
Sources: Web Of Science, ORCID
Added: May 21, 2021

2021 journal article

Provenance and Family Variation in Biomass Potential of Loblolly Pine in the Piedmont of North Carolina

FOREST SCIENCE, 67(3), 312–320.

By: J. Maynor*, F. Isik n, T. Walker n, R. Whetten n, A. Heine n, K. Payn n, S. McKeand n

co-author countries: United States of America 🇺🇸
author keywords: bioenergy; genetics; Pinus taeda; wood quality
Sources: ORCID, Web Of Science
Added: March 24, 2021

2021 article

Simulation of Pedigree vs. fully-informative marker based relationships matrices in a Loblolly Pine breeding population

Festa, A. R., & Whetten, R. (2021, December 1).

By: A. Festa n & R. Whetten n

co-author countries: United States of America 🇺🇸
Source: ORCID
Added: December 2, 2021

2021 journal article

Toward genomic selection in Pinus taeda: Integrating resources to support array design in a complex conifer genome

APPLICATIONS IN PLANT SCIENCES, 9(6).

By: M. Caballero*, E. Lauer n, J. Bennett*, S. Zaman*, S. McEvoy*, J. Acosta n, C. Jackson n, L. Townsend n ...

co-author countries: United States of America 🇺🇸
author keywords: exome capture; genomic selection; genotype array; genotyping-by-sequencing (GBS); loblolly pine; Pinus taeda; variant detection
Sources: ORCID, Web Of Science
Added: July 4, 2021

2020 journal article

A fast, flexible and inexpensive protocol for DNA and RNA extraction for forest trees

FOREST SYSTEMS, 29(2).

By: Y. Kurt*, L. Matallana-Ramirez, W. Kohlway*, R. Whetten* & J. Frampton*

author keywords: Angiosperms; gymnosperms; isolation protocol; nucleic acids
Sources: Web Of Science, ORCID
Added: December 14, 2020

2020 journal article

Ad hoc breeding of a genetically depauperate landrace of noble fir (Abies procera Rehder) using SNP genotyping via high-throughput targeted sequencing

Tree Genetics & Genomes, 16(5).

By: O. Hansen*, K. Lamour*, R. Whetten n, J. Xu*, A. Cuenca*, M. Islam*, U. Nielsen*

co-author countries: Denmark 🇩🇰 United States of America 🇺🇸
author keywords: Pedigree reconstruction; Christmas tree breeding; Genetic bottleneck; Neonectria neomacrospora; Index selection
Source: ORCID
Added: August 11, 2020

2020 journal article

Correspondence between Breeding Values of the Same Pinus taeda L. Genotypes from Clonal Trials and Half-Sib Seedling Progeny Trials

Forest Science, 66(5), 600–611.

By: M. Shalizi n, S. Gezan*, S. McKeand n, J. Sherrill*, W. Cumbie n, R. Whetten n, F. Isik n

co-author countries: Canada 🇨🇦 United States of America 🇺🇸

Contributors: M. Shalizi n

author keywords: clonal tests; genetic correlation; genotype ranking; heritability; propagule effect
Sources: ORCID, Crossref
Added: September 11, 2020

2020 journal article

Population structure, landscape genomics, and genetic signatures of adaptation to exotic disease pressure in Cornus florida L.—Insights from GWAS and GBS data

Journal of Systematics and Evolution, 58(5), 546–570.

By: A. Pais n, R. Whetten n & Q. Xiang n

co-author countries: United States of America 🇺🇸
author keywords: Cornus florida; flowering dogwood; genotype by sequencing; GWAS; landscape ecological-evolutionary genomics
Source: ORCID
Added: June 2, 2020

2018 journal article

Heritable variation in needle spectral reflectance of Scots pine (Pinus sylvestris L.) peaks in red edge

Remote Sensing of Environment, 219, 89–98.

By: J. Čepl*, J. Stejskal*, Z. Lhotáková*, D. Holá*, J. Korecký*, M. Lstibůrek*, I. Tomášková*, M. Kočová* ...

co-author countries: Czechia 🇨🇿 United States of America 🇺🇸
author keywords: Pedigree reconstruction; NDVI; Spectral vegetation indices; Chlorophyll; Carotenoids
Sources: Web Of Science, ORCID, Crossref
Added: December 3, 2018

2017 article

Advances in ecological genomics in forest trees and applications to genetic resources conservation and breeding

Holliday, J. A., Aitken, S. N., Cooke, J. E. K., Fady, B., Gonzalez-Martinez, S. C., Heuertz, M., … Plomion, C. (2017, February). MOLECULAR ECOLOGY, Vol. 26, pp. 706–717.

By: J. Holliday*, S. Aitken*, J. Cooke*, B. Fady*, S. Gonzalez-Martinez*, M. Heuertz*, J. Jaramillo-Correa*, C. Lexer* ...

co-author countries: Austria 🇦🇹 Canada 🇨🇦 France 🇫🇷 Mexico 🇲🇽 United States of America 🇺🇸
author keywords: adaptation; conservation genetics; forestry; genomics/proteomics; molecular evolution; phylogeography
MeSH headings : Climate Change; Congresses as Topic; Conservation of Natural Resources; Forests; France; Genomics / methods; Plant Breeding; Trees / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2017 journal article

Correspondence of Loblolly Pine Response for Fusiform Rust Disease from Local and Wide-Ranging Tests in the Southern United States

FOREST SCIENCE, 63(5), 496–503.

By: J. Spitzer*, F. Isik*, R. Whetten*, A. Farjat* & S. McKeand*

co-author countries: United States of America 🇺🇸
author keywords: tree improvement; loblolly; pine; fusiform; rust
Sources: Web Of Science, ORCID
Added: August 6, 2018

2017 journal article

Optimal seed deployment under climate change using spatial models: Application to loblolly pine in the Southeastern US

Journal of the American Statistical Association, 112(519), 909–920.

By: A. Farjat n, B. Reich n, J. Guinness n, R. Whetten n, S. McKeand n & F. Isik n

co-author countries: United States of America 🇺🇸
Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2017 journal article

Response of Turkish and Trojan fir to Phytophthora cinnamomi and P. cryptogea

Scandinavian Journal of Forest Research, 32(5), 406–411.

co-author countries: United States of America 🇺🇸
author keywords: Abies; disease resistance; North Carolina; root rot
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2017 journal article

Variation among Loblolly Pine Seed Sources across Diverse Environments in the Southeastern United States

Forest Science, 63(1), 39–48.

By: A. Farjat*, A. Chamblee, F. Isik*, R. Whetten* & S. McKeand*

author keywords: Pinus taeda; seed source; provenance test; genotype x environment interaction; multienvironmental trial analysis
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2016 journal article

Ecological genomics of local adaptation in Cornus florida L. by genotyping by sequencing

Ecology and Evolution, 7(1), 441–465.

By: A. Pais n, R. Whetten n & Q. Xiang n

co-author countries: United States of America 🇺🇸
author keywords: Cornus florida; genotyping by sequencing; local adaptation; single nucleotide polymorphisms
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2016 journal article

Genetic variability and heritability of chlorophyll a fluorescence parameters in Scots pine (Pinus sylvestris L.)

Tree Physiology, 36(7), 883–895.

By: J. Čepl*, D. Holá*, J. Stejskal*, J. Korecký*, M. Kočová*, Z. Lhotáková*, I. Tomášková*, M. Palovská* ...

co-author countries: Czechia 🇨🇿 United States of America 🇺🇸

Ed(s): J. Schnitzler

author keywords: OJIP transient; pedigree reconstruction; photosynthesis
MeSH headings : Animals; Chlorophyll / physiology; Chlorophyll A; Electron Transport; Fluorescence; Forests; Genes, Plant; Genetic Variation; Genotype; Light; Photosynthesis / genetics; Photosynthetic Reaction Center Complex Proteins / physiology; Photosystem II Protein Complex / physiology; Pinus sylvestris / genetics; Pinus sylvestris / physiology; Quantitative Trait, Heritable; Trees / genetics; Trees / physiology
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2016 journal article

Quantitative trait loci influencing forking defects in an outbred pedigree of loblolly pine

BMC Genetics, 17(1).

By: J. Xiong n, S. McKeand n, F. Isik n, J. Wegrzyn*, D. Neale*, Z. Zeng n, L. da Costa e Silva*, R. Whetten n

co-author countries: Brazil 🇧🇷 United States of America 🇺🇸
author keywords: QTL; Stem forking; Outbred; Pinus taeda; MAS; Tree breeding; Wood quality
MeSH headings : Algorithms; Breeding; Chromosome Mapping; Genetic Association Studies; Genetic Linkage; Genetic Markers; Genotype; Models, Statistical; Pedigree; Phenotype; Pinus taeda / genetics; Polymorphism, Single Nucleotide; Quantitative Trait Loci; Quantitative Trait, Heritable
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2015 journal article

Modeling Climate Change Effects on the Height Growth of Loblolly Pine

Forest Science, 61(4), 703–715.

By: A. Farjat*, F. Isik*, B. Reich*, R. Whetten n & S. McKeand n

co-author countries: United States of America 🇺🇸
author keywords: Pinus taeda; provenance test; statistical model; universal response function; climate change
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2015 journal article

Phylogenomics of polyploid Fothergilla (Hamamelidaceae) by RAD-tag based GBS-insights into species origin and effects of software pipelines

Journal of Systematics and Evolution, 53(5), 432–447.

By: Z. Qi n, Y. Yu n, X. Liu n, A. Pais n, T. Ranney n, R. Whetten n, Q. Xiang n

co-author countries: China 🇨🇳 United States of America 🇺🇸
author keywords: Fothergilla; hybridization; illumina sequencing; phylogenomics; RAD-tag-based GBS; polyploidy
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2014 journal article

Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies

GENOME BIOLOGY, 15(3).

By: D. Neale*, J. Wegrzyn*, K. Stevens*, A. Zimin*, D. Puiu*, M. Crepeau*, C. Cardeno*, M. Koriabine ...

co-author countries: United States of America 🇺🇸
MeSH headings : Contig Mapping / methods; DNA, Plant / genetics; Genome, Plant; Haploidy; Pinus taeda / genetics; Sequence Analysis, DNA / methods
Sources: Web Of Science, ORCID
Added: August 6, 2018

2014 journal article

Development of a genetic linkage map for Pinus radiata and detection of pitch canker disease resistance associated QTLs

Trees, 28(6), 1823–1835.

By: P. Moraga-Suazo*, L. Orellana*, P. Quiroga*, C. Balocchi*, E. Sanfuentes*, R. Whetten n, R. Hasbún*, S. Valenzuela*

co-author countries: Chile 🇨🇱 United States of America 🇺🇸
author keywords: Radiata pine; Fusarium circinatum; Linkage analysis; Quantitative resistance; Molecular markers
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2014 journal article

Genetic Analysis of Diallel Progeny Test Data Using Factor Analytic Linear Mixed Models

FOREST SCIENCE, 60(1), 119–127.

By: F. Ogut n, C. Maltecca n, R. Whetten n, S. McKeand n & F. Isik*

co-author countries: United States of America 🇺🇸

Contributors: F. Ogut n, C. Maltecca n, R. Whetten n, S. Mckeand n & F. Isik*

author keywords: Pinus taeda; heritability; genotype x environment interactions; accuracy of predictions; heterogeneous covariance structures
Sources: Web Of Science, ORCID
Added: August 6, 2018

2014 journal article

Genetics of Stem Forking and Ramicorn Branches in a Cloned Loblolly Pine Family

Forest Science, 60(2), 360–366.

By: J. Xiong, S. McKeand*, R. Whetten* & F. Isik*

author keywords: repeatability; clonal selection; genetic gain; Pinus taeda
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2013 journal article

Genomic Estimated Breeding Values Using Genomic Relationship Matrices in a Cloned Population of Loblolly Pine

G3: Genes|Genomes|Genetics, 3(5), 909–916.

By: J. Zapata-Valenzuela n, R. Whetten n, D. Neale*, S. McKeand n & F. Isik n

co-author countries: United States of America 🇺🇸
author keywords: GenPred; Shared data resource; Pinus taeda quantitative genetics best linear unbiased prediction
MeSH headings : Breeding; Cloning, Molecular; Gene Frequency / genetics; Genetics, Population; Genome, Plant / genetics; Genomics / methods; Linear Models; Pinus taeda / genetics; Regression Analysis; Reproducibility of Results; Trees / genetics
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2013 journal article

Potential for evolutionary responses to climate change - evidence from tree populations

Global Change Biology, 19(6), 1645–1661.

By: F. Alberto*, S. Aitken*, R. Alía*, S. González-Martínez*, H. Hänninen*, A. Kremer*, F. Lefèvre*, T. Lenormand* ...

co-author countries: Canada 🇨🇦 Switzerland 🇨🇭 Spain 🇪🇸 Finland 🇫🇮 France 🇫🇷 United States of America 🇺🇸
author keywords: adaptive traits; conifers; local adaptation; natural selection; phenotypic plasticity; provenance trials; quantitative genetics
MeSH headings : Adaptation, Physiological / genetics; Climate Change; Evolution, Molecular; Geography; Species Specificity; Trees / genetics; Trees / physiology
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2012 journal article

SNP markers trace familial linkages in a cloned population of Pinus taeda-prospects for genomic selection

TREE GENETICS & GENOMES, 8(6), 1307–1318.

By: J. Zapata-Valenzuela n, F. Isik n, C. Maltecca n, J. Wegrzyn*, D. Neale*, S. McKeand n, R. Whetten n

co-author countries: United States of America 🇺🇸

Contributors: J. Zapata-Valenzuela n, F. Isik n, C. Maltecca n, J. Wegrzyn*, D. Neale*, S. McKeand n, R. Whetten n

author keywords: Loblolly pine; Marker-aided selection; Quantitative genetics; Genomic selection; Marker-trait association
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Association genetics of carbon isotope discrimination, height and foliar nitrogen in a natural population of Pinus taeda L

Heredity, 107(2), 105–114.

co-author countries: United States of America 🇺🇸
author keywords: water use efficiency; forest tree; population genetics; loblolly pine
MeSH headings : Carbon Isotopes / metabolism; Gene Frequency / genetics; Genes, Plant / genetics; Genetic Association Studies; Molecular Sequence Annotation; Nitrogen / metabolism; Phenotype; Pinus taeda / genetics; Pinus taeda / metabolism; Polymorphism, Single Nucleotide / genetics
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2011 journal article

Comparison between tracheary element lignin formation and extracellular lignin-like substance formation during the culture of isolated Zinnia elegans mesophyll cells

BIOLOGIA, 66(1), 88–95.

By: Y. Sato*, Y. Yajima*, N. Tokunaga* & R. Whetten n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: Zinnia elegans; lignin and lignin-like substance; peroxidase; tracheary element
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Interactions of Fr genes and mixed-pathogen inocula in the loblolly pine-fusiform rust pathosystem

Tree Genetics & Genomes, 8(1), 15–25.

By: F. Isik n, H. Amerson n, R. Whetten n, S. Garcia n & S. McKeand n

co-author countries: United States of America 🇺🇸
author keywords: Pinus taeda; Disease resistance; Gene-for-gene resistance; Tree improvement; Virulence assessment
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2010 journal article

Genetic variation of stem forking in loblolly pine

Forest Science, 56(5), 429–436.

By: J. Xiong, F. Isik, S. McKeand & R. Whetten

Source: NC State University Libraries
Added: August 6, 2018

2010 review

Research gap analysis for application of biotechnology to sustaining US forests

[Review of ]. Journal of Forestry, 108(4), 193–201.

By: R. Whetten & R. Kellison

Source: NC State University Libraries
Added: August 6, 2018

2009 journal article

Polymerase chain reaction of template for massively-parallel pyrosequencing

Journal of Biomolecular Techniques, 20(2), 128–134.

By: R. Whetten, S. Valenzuela & I. Frampton

Source: NC State University Libraries
Added: August 6, 2018

2009 journal article

Post-translational modification of an R2R3-MYB transcription factor by a MAP Kinase during xylem development

NEW PHYTOLOGIST, 183(4), 1001–1013.

By: A. Morse*, R. Whetten n, C. Dubos* & M. Campbell*

co-author countries: Canada 🇨🇦 United States of America 🇺🇸
author keywords: mitogen-activated protein kinase (MAPK); pine; protein phosphorylation; R2R3-MYB; wood; xylogenesis
MeSH headings : Gene Expression Regulation, Plant; Genes, Plant; Mitogen-Activated Protein Kinases / genetics; Phosphorylation; Pinus taeda / genetics; Protein Processing, Post-Translational / genetics; Serine; Transcription Factors / genetics; Xylem / genetics; Xylem / growth & development
Sources: Web Of Science, ORCID
Added: August 6, 2018

2008 journal article

Resistance of Pinus taeda families under artificial inoculations with diverse fusiform rust pathogen populations and comparison with field trials

Canadian Journal of Forest Research, 38(10), 2687–2696.

By: F. Isik n, H. Amerson n, R. Whetten n, S. Garcia n, B. Li n & S. McKeand n

co-author countries: United States of America 🇺🇸
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2008 article

Resistance of Pinus taeda families under artificial inoculations with diverse fusiform rust pathogen populations and comparison with field trials (vol 38, pg 2687, 2008)

Isik, F., Amerson, H. V., Whetten, R. W., Garcia, S. A., Li, B., & McKeand, S. E. (2008, December). CANADIAN JOURNAL OF FOREST RESEARCH-REVUE CANADIENNE DE RECHERCHE FORESTIERE, Vol. 38, pp. 3151–3151.

By: F. Isik n, H. Amerson n, R. Whetten n, S. Garcia n, B. Li n & S. McKeand n

co-author countries: United States of America 🇺🇸
Sources: Web Of Science, ORCID
Added: August 6, 2018

2006 journal article

Characterization of two laccases of loblolly pine (Pinus taeda) expressed in tobacco BY-2 cells

JOURNAL OF PLANT RESEARCH, 119(6), 581–588.

By: Y. Sato* & R. Whetten n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: bright yellow-2 (BY-2); dilignols; heterologous expression; lignin synthesis; multicopper oxidase
MeSH headings : Cell Line, Transformed; Cloning, Molecular; Copper Sulfate / metabolism; Electrophoresis, Polyacrylamide Gel; Hydrogen-Ion Concentration; Isoenzymes / chemistry; Isoenzymes / genetics; Isoenzymes / physiology; Laccase / chemistry; Laccase / genetics; Laccase / physiology; Lignin / metabolism; Phenols / metabolism; Phenylpropionates / metabolism; Pinus taeda / enzymology; Plants, Genetically Modified; Tobacco; Xylem / enzymology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2004 journal article

An auxin-inducible gene from loblolly pine ( Pinus taeda L.) is differentially expressed in mature and juvenile-phase shoots and encodes a putative transmembrane protein

Planta, 218(6), 916–927.

By: V. Busov n, E. Johannes n, R. Whetten n, R. Sederoff n, S. Spiker n, C. Lanz-Garcia n, B. Goldfarb n

co-author countries: United States of America 🇺🇸
author keywords: adventitious root formation; auxin; gene expression (5NG4); maturation; nodulin; Pinus
MeSH headings : Amino Acid Sequence; Arabidopsis / genetics; Down-Regulation; Gene Expression Regulation, Plant; Indoleacetic Acids / metabolism; Indoleacetic Acids / pharmacology; Molecular Sequence Data; Phylogeny; Pinus taeda / genetics; Pinus taeda / metabolism; Plant Proteins / genetics; Plant Proteins / metabolism; Plant Shoots / growth & development; Plant Shoots / metabolism; Sequence Alignment; Sequence Homology, Amino Acid
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2004 journal article

Gene Expression during Formation of Earlywood and Latewood in Loblolly Pine: Expression Profiles of 350 Genes

Plant Biology, 6(6), 654–663.

By: U. Egertsdotter*, L. Zyl n, J. MacKay*, G. Peter*, M. Kirst n, C. Clark n, R. Whetten n, R. Sederoff n

co-author countries: Canada 🇨🇦 United States of America 🇺🇸
author keywords: microarray analysis; Pinus taeda; earlywood; latewood; transcript abundance
MeSH headings : Expressed Sequence Tags; Gene Expression Profiling; Gene Expression Regulation, Plant; Genes, Plant; Microarray Analysis; Pinus taeda / genetics; Pinus taeda / metabolism; Reverse Transcriptase Polymerase Chain Reaction; Seasons; Transcription, Genetic
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2004 journal article

Genetics of Postzygotic Isolation in Eucalyptus: Whole-Genome Analysis of Barriers to Introgression in a Wide Interspecific Cross of Eucalyptus grandis and E. globulus

Genetics, 166(3), 1405–1418.

By: A. Myburg n, C. Vogl*, A. Griffin*, R. Sederoff n & R. Whetten n

co-author countries: Australia 🇦🇺 United States of America 🇺🇸
MeSH headings : Alleles; Bayes Theorem; Chi-Square Distribution; Chromosome Mapping; Chromosomes, Plant; Crosses, Genetic; Eucalyptus / genetics; Genetic Linkage; Genetic Markers; Genome, Plant; Hybridization, Genetic; Markov Chains; Monte Carlo Method; Pedigree; Polymorphism, Restriction Fragment Length; Species Specificity
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2003 journal article

An arabinogalactan protein associated with secondary cell wall formation in differentiating xylem of loblolly pine

Plant Molecular Biology, 52(1), 91–102.

By: Y. Zhang n, G. Brown*, R. Whetten n, C. Loopstra*, D. Neale*, M. Kieliszewski*, R. Sederoff n

co-author countries: United States of America 🇺🇸
author keywords: arabinogalactan proteins (AGPs); Pinus taeda; plant cell wall biosynthesis; xylem differentiation
MeSH headings : Amino Acid Sequence; Antibodies, Monoclonal / immunology; Antibody Specificity; Blotting, Western; Cell Wall / metabolism; Chromatography, High Pressure Liquid / methods; Chromosome Mapping; Escherichia coli / genetics; Haplotypes; Immunohistochemistry; Molecular Sequence Data; Mucoproteins / genetics; Mucoproteins / immunology; Mucoproteins / metabolism; Pinus / genetics; Pinus / metabolism; Pinus taeda; Plant Proteins; Plant Structures / growth & development; Plant Structures / metabolism; Recombinant Proteins / genetics; Recombinant Proteins / isolation & purification; Recombinant Proteins / metabolism; Sequence Alignment; Sequence Analysis, DNA; Sequence Homology, Amino Acid
Sources: ORCID, Web Of Science
Added: August 6, 2018

2003 journal article

Apparent homology of expressed genes from wood-forming tissues of loblolly pine (Pinus taeda L.) with Arabidopsis thaliana

Proceedings of the National Academy of Sciences, 100(12), 7383–7388.

By: M. Kirst n, A. Johnson n, C. Baucom n, E. Ulrich n, K. Hubbard n, R. Staggs n, C. Paule n, E. Retzel n, R. Whetten n, R. Sederoff n

co-author countries: United States of America 🇺🇸
MeSH headings : 3' Untranslated Regions; 5' Untranslated Regions; Arabidopsis / genetics; Conserved Sequence; Contig Mapping; DNA, Complementary / genetics; DNA, Plant / genetics; Evolution, Molecular; Expressed Sequence Tags; Gene Expression; Genes, Plant; Genome, Plant; Molecular Sequence Data; Pinus / genetics; Pinus taeda; Retroelements / genetics; Sequence Homology, Nucleic Acid; Species Specificity; Wood
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2003 journal article

Aux/IAA gene family is conserved in the gymnosperm, loblolly pine (Pinus taeda)

Tree Physiology, 23(17), 1181–1192.

co-author countries: United States of America 🇺🇸
author keywords: adventitious roots; auxin; auxin-induced genes; early response genes; multi-gene family
MeSH headings : Amino Acid Sequence; Blotting, Northern; Blotting, Southern; Cloning, Molecular; Conserved Sequence / genetics; Gene Expression Regulation, Plant / genetics; Genes, Plant / genetics; Indoleacetic Acids / physiology; Phylogeny; Pinus taeda / genetics; Plant Proteins / genetics; Sequence Alignment; Trees / genetics
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2003 journal article

Changes in mitogen-activated protein kinase activity occur in the maize pulvinus in response to gravistimulation and are important for the bending response

PLANT CELL AND ENVIRONMENT, 26(7), 991–1001.

By: A. Clore*, W. Turner n, A. Morse n & R. Whetten n

co-author countries: United States of America 🇺🇸
author keywords: Zea mays L.; gravitropism; mitogen-activated protein kinase (MAPK); U0126
Sources: Web Of Science, ORCID
Added: August 6, 2018

2003 journal article

Characterisation of PtMYB1, an R2R3-MYB from pine xylem

Plant Molecular Biology, 53(4), 597–608.

By: A. Patzlaff*, L. Newman*, C. Dubos*, R. Whetten n, C. Smith*, S. McInnis*, M. Bevan*, R. Sederoff n, M. Campbell*

co-author countries: United Kingdom of Great Britain and Northern Ireland 🇬🇧 United States of America 🇺🇸
author keywords: MYB; phenylalanine ammonia-lyase; phenylpropanoid; pine; xylem
MeSH headings : Adenosine Triphosphate / genetics; Adenosine Triphosphate / metabolism; Base Sequence; Binding Sites / genetics; Cloning, Molecular; Cytidine Triphosphate / genetics; Cytidine Triphosphate / metabolism; DNA, Complementary / chemistry; DNA, Complementary / genetics; Electrophoretic Mobility Shift Assay; Molecular Sequence Data; Oligonucleotides / genetics; Oligonucleotides / metabolism; Phylogeny; Pinus / genetics; Plant Proteins / genetics; Plant Proteins / metabolism; Plant Structures / genetics; Protein Binding; Proto-Oncogene Proteins c-myb / genetics; Proto-Oncogene Proteins c-myb / metabolism; Recombinant Fusion Proteins / genetics; Recombinant Fusion Proteins / metabolism; Saccharomyces cerevisiae / genetics; Sequence Analysis, DNA; Transcription, Genetic / genetics
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2003 journal article

Characterisation of a pine MYB that regulates lignification

The Plant Journal, 36(6), 743–754.

By: A. Patzlaff*, S. McInnis*, A. Courtenay*, C. Surman*, L. Newman*, C. Smith*, M. Bevan*, S. Mansfield* ...

co-author countries: Canada 🇨🇦 United Kingdom of Great Britain and Northern Ireland 🇬🇧 United States of America 🇺🇸
author keywords: lignin; MYB; transcription; wood; pine; phenylpropanoid
MeSH headings : Amino Acid Sequence; Arabidopsis / genetics; Arabidopsis Proteins / chemistry; Arabidopsis Proteins / genetics; Base Sequence; DNA, Complementary / genetics; DNA-Binding Proteins / chemistry; DNA-Binding Proteins / genetics; Gene Expression Regulation, Plant / genetics; Gene Library; Genes, myb / genetics; Lignin / genetics; Molecular Sequence Data; Pinus / genetics; Plant Proteins / chemistry; Plant Proteins / genetics; Plants, Genetically Modified / genetics; Plants, Genetically Modified / metabolism; RNA, Plant / genetics; RNA, Plant / isolation & purification; Sequence Alignment; Sequence Homology, Amino Acid; Sequence Homology, Nucleic Acid; Tobacco / metabolism; Transcription Factors / chemistry; Transcription Factors / genetics
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2003 journal article

Comparative genetic linkage maps of Eucalyptus grandis, Eucalyptus globulus and their F1 hybrid based on a double pseudo-backcross mapping approach

Theoretical and Applied Genetics, 107(6), 1028–1042.

By: A. Myburg n, A. Griffin*, R. Sederoff n & R. Whetten n

co-author countries: Australia 🇦🇺 United States of America 🇺🇸 South Africa 🇿🇦
author keywords: comparative mapping; AFLP; Eucalyptus; transmission ratio distortion; genome synteny
MeSH headings : Chromosome Mapping; Chromosomes, Plant; Eucalyptus / genetics; Genetic Linkage; Genome, Plant; Inbreeding; Polymorphism, Genetic
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2002 journal article

Studying the functional genomics of stress responses in loblolly pine with the Expresso microarray experiment management system

COMPARATIVE AND FUNCTIONAL GENOMICS, 3(3), 226–243.

By: L. Heath*, N. Ramakrishnan*, R. Sederoff n, R. Whetten n, B. Chevone*, C. Struble*, V. Jouenne*, D. Chen* ...

co-author countries: United States of America 🇺🇸
author keywords: microarrays; data mining; experiment management systems; inductive logic programming; reactive oxygen species; drought stress; Pinus taeda; microarray design
Sources: Web Of Science, ORCID
Added: August 6, 2018

2001 chapter

Functional genomics and cell wall biosynthesis in loblolly pine

In Plant Cell Walls (pp. 275–291).

By: R. Whetten n, Y. Sun n, Y. Zhang n & R. Sederoff n

co-author countries: United States of America 🇺🇸
Sources: Crossref, ORCID
Added: January 4, 2020

2001 journal article

Functional genomics and cell wall biosynthesis in loblolly pine

Plant Molecular Biology, 47(1/2), 275–291.

By: R. Whetten n, Y. Sun n, Y. Zhang n & R. Sederoff n

co-author countries: United States of America 🇺🇸
author keywords: EST sequencing; microarrays; Pinus taeda; xylogenesis; wood formation
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2001 journal article

Genotypic control of high-frequency adventitious shoot regeneration via somatic organogenesis in loblolly pine

Plant Science, 161(2), 267–272.

By: W. Tang n, R. Whetten n & R. Sederoff n

co-author countries: United States of America 🇺🇸
author keywords: Pinus taedu L.; organogenesis; adventitious shoot regeneration; callus induction frequency; differentiation frequency
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2001 journal article

High-throughput AFLP analysis using infrared dye-labeled primers and an automated DNA sequencer

BIOTECHNIQUES, 30(2), 348-+.

By: A. Myburg n, D. Remington n, . DM O'Malley n, R. Sederoff n & R. Whetten n

co-author countries: United States of America 🇺🇸
MeSH headings : Electrophoresis; Genetic Markers; Genotype; Infrared Rays; Polymerase Chain Reaction; Polymorphism, Genetic; Sequence Analysis, DNA
Sources: Web Of Science, ORCID
Added: August 6, 2018

2001 journal article

Molecular Cloning and Expression of Eight Laccase cDNAs in Loblolly Pine (Pinus taeda)*

Journal of Plant Research, 114(2), 147–155.

By: Y. Sato*, B. Wuli n, R. Sederoff n & R. Whetten n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
author keywords: laccase; lignin synthesis; loblolly pine (Pinus taeda L); xylem differentiation
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

2001 journal article

Regeneration of transgenic loblolly pine (Pinus taeda L.) from zygotic embryos transformed with Agrobacterium tumefaciens

PLANTA, 213(6), 981–989.

By: W. Tang n, R. Sederoff n & R. Whetten n

co-author countries: United States of America 🇺🇸
author keywords: genetic transformation; beta-glucuronidase gene; Pinus (transformation); plant DNA/T-DNA junction analysis; transgenic pine; zygotic embryo
MeSH headings : Agrobacterium tumefaciens / genetics; Base Sequence; Blotting, Southern; Culture Techniques; DNA, Bacterial / analysis; DNA, Bacterial / genetics; DNA, Plant / analysis; DNA, Plant / genetics; Glucuronidase / genetics; Glucuronidase / metabolism; Pinus / genetics; Pinus / physiology; Pinus taeda; Plant Shoots / genetics; Plant Shoots / physiology; Plant Structures / genetics; Plant Structures / physiology; Plants, Genetically Modified; Polymerase Chain Reaction; Recombinant Fusion Proteins / genetics; Recombinant Fusion Proteins / metabolism; Regeneration / physiology; Seeds / genetics; Seeds / physiology; Transformation, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018

1999 journal article

Construction of an AFLP genetic map with nearly complete genome coverage in Pinus taeda

THEORETICAL AND APPLIED GENETICS, 98(8), 1279–1292.

By: D. Remington*, R. Whetten*, B. Liu* & . DM O'Malley

author keywords: Pinus taeda; linkage map; AFLP; locus ordering; genome length estimation
MeSH headings : Chromosome Mapping; Genes, Plant; Genetic Linkage; Genome, Plant; Lod Score; Models, Genetic; Pinus / genetics; Pinus taeda; Polymorphism, Genetic; Software
Sources: Web Of Science, ORCID
Added: August 6, 2018

1999 journal article

High-efficiency Agrobacterium-mediated transformation of Norway spruce (Picea abies) and loblolly pine (Pinus taeda)

Plant Molecular Biology, 39(3), 407–416.

By: A. Wenck n, M. Quinn n, R. Whetten n, G. Pullman & R. Sederoff n

co-author countries: United States of America 🇺🇸
MeSH headings : Acetophenones / pharmacology; Agrobacterium tumefaciens / genetics; Agrobacterium tumefaciens / growth & development; Agrobacterium tumefaciens / pathogenicity; Base Sequence; Culture Techniques; DNA, Bacterial / analysis; DNA, Bacterial / genetics; Dose-Response Relationship, Drug; Molecular Sequence Data; Pinus taeda; Transformation, Genetic / drug effects; Virulence / genetics
Sources: NC State University Libraries, ORCID
Added: August 6, 2018

1998 journal article

AFLP genetic maps of Eucalyptus globulus and E-tereticornis

THEORETICAL AND APPLIED GENETICS, 96(6-7), 727–737.

By: C. Marques, J. Araujo*, J. Ferreira*, R. Whetten*, . DM O'Malley, B. Liu*, R. Sederoff*

co-author countries: Portugal 🇵🇹
author keywords: genetic map; linkage; Eucalyptus; AFLP marker
Sources: Web Of Science, ORCID
Added: August 6, 2018

1998 journal article

Analysis of xylem formation in pine by cDNA sequencing

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 95(16), 9693–9698.

By: I. Allona n, M. Quinn n, E. Shoop n, K. Swope n, S. St Cyr n, J. Carlis n, J. Riedl n, E. Retzel n ...

co-author countries: United States of America 🇺🇸
MeSH headings : DNA, Complementary; Gene Expression Regulation, Plant; Molecular Sequence Data; Trees / genetics; Trees / metabolism; Wood
Sources: Web Of Science, ORCID
Added: August 6, 2018

1998 patent

Method of altering lignin in trees

Washington, DC: U.S. Patent and Trademark Office.

By: J. MacKay, D. O'Malley, R. Whetten & R. Sederoff

Source: NC State University Libraries
Added: August 6, 2018

1998 review

Recent advances in understanding lignin biosynthesis

[Review of ]. ANNUAL REVIEW OF PLANT PHYSIOLOGY AND PLANT MOLECULAR BIOLOGY, 49(1998), 585–609.

By: R. Whetten n, J. MacKay n & R. Sederoff n

co-author countries: United States of America 🇺🇸
author keywords: monolignol biosynthesis; lignin composition; pulp manufacturing; forage quality; metabolic plasticity
Sources: Web Of Science, ORCID
Added: August 6, 2018

1997 journal article

Abnormal lignin in a loblolly pine mutant

SCIENCE, 277(5323), 235–239.

By: J. Ralph n, J. MacKay n, R. Hatfield n, D. OMalley n, R. Whetten n & R. Sederoff n

co-author countries: United States of America 🇺🇸
MeSH headings : Alcohol Oxidoreductases / deficiency; Alcohol Oxidoreductases / genetics; Alcohol Oxidoreductases / metabolism; Aldehydes / analysis; Lignin / biosynthesis; Lignin / chemistry; Magnetic Resonance Spectroscopy; Mutation; Oxidation-Reduction; Phenols / analysis; Phenols / metabolism; Pinus taeda; Plant Proteins / genetics; Plant Proteins / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

1997 article

Inheritance, gene expression, and lignin characterization in a mutant pine deficient in cinnamyl alcohol dehydrogenase

MacKay, J. J., OMalley, D. M., Presnell, T., Booker, F. L., Campbell, M. M., Whetten, R. W., & Sederoff, R. R. (1997, July 22). PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, Vol. 94, pp. 8255–8260.

By: J. MacKay n, D. OMalley n, T. Presnell n, F. Booker n, M. Campbell n, R. Whetten n, R. Sederoff n

co-author countries: United States of America 🇺🇸
MeSH headings : Alcohol Oxidoreductases / genetics; Alcohol Oxidoreductases / metabolism; Chromosome Mapping; Gene Expression Regulation, Enzymologic / genetics; Gene Expression Regulation, Plant / genetics; Homozygote; Lignin / metabolism; Mutation; Phenotype; Substrate Specificity; Trees / enzymology; Trees / genetics; Trees / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

1997 chapter

Molecular markers and forest trees

In P. M. G. G. Caetano-Anolles (Ed.), DNA markers: Protocols, applications, and overviews (pp. 237–257). New York: Wiley-VCH.

By: D. O'Malley & R. Whetten

Ed(s): P. G. Caetano-Anolles

Source: NC State University Libraries
Added: August 6, 2018

1995 journal article

4-Coumarate: Coenzyme A Ligase from Loblolly Pine Xylem: Isolation, Characterization, and Complementary DNA Cloning

Plant Physiology, 108(1), 85–97.

By: K. Voo n, R. Whetten n, D. O'Malley n & R. Sederoff n

co-author countries: United States of America 🇺🇸
MeSH headings : Amino Acid Sequence; Base Sequence; Chromatography, Gel; Chromatography, High Pressure Liquid; Chromatography, Ion Exchange; Cloning, Molecular; Coenzyme A Ligases / chemistry; Coenzyme A Ligases / isolation & purification; Coenzyme A Ligases / metabolism; Kinetics; Molecular Sequence Data; Molecular Weight; Pinus taeda; Polymerase Chain Reaction; Recombinant Proteins / chemistry; Recombinant Proteins / isolation & purification; Recombinant Proteins / metabolism; Sequence Homology, Amino Acid; Substrate Specificity
Sources: ORCID, Web Of Science
Added: August 6, 2018

1995 journal article

Characterization of an Unstable Anthocyanin Phenotype and Estimation of Somatic Mutation Rates in Peach

Journal of Heredity, 86(3), 186–193.

By: J. Chaparro n, D. Werner n, R. Whetten n & D. O'Malley n

co-author countries: United States of America 🇺🇸
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

1995 journal article

Genetic analysis of cinnamyl alcohol dehydrogenase in loblolly pine: single gene inheritance, molecular characterization and evolution

MGG Molecular & General Genetics, 247(5), 537–545.

By: J. MacKay n, W. Liu n, R. Whetten n, R. Sederoff n & D. O'Malley n

co-author countries: United States of America 🇺🇸
author keywords: CINNAMYL ALCOHOL DEHYDROGENASE; PINE; LIGNIN BIOSYNTHESIS; DNA SEQUENCE; GENOME; EVOLUTION
MeSH headings : Alcohol Oxidoreductases / chemistry; Alcohol Oxidoreductases / genetics; Amino Acid Sequence; Base Sequence; Biological Evolution; Cloning, Molecular; Gene Expression Regulation, Enzymologic; Isoenzymes / chemistry; Isoenzymes / genetics; Molecular Sequence Data; Pinus taeda; Plants / enzymology; Plants / genetics; Sequence Alignment; Sequence Analysis
Sources: Crossref, ORCID
Added: January 4, 2020

1995 journal article

Inheritance, Genetic Interaction, and Biochemical Characterization of Anthocyanin Phenotypes in Peach

Journal of Heredity, 86(1), 32–38.

By: J. Chaparro n, D. Werner n, R. Whetten n & D. O'Malley n

co-author countries: United States of America 🇺🇸
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

1995 review

LIGNIN BIOSYNTHESIS

[Review of ]. PLANT CELL, 7(7), 1001–1013.

By: R. Whetten* & R. Sederoff*

Sources: Web Of Science, ORCID
Added: August 6, 2018

1993 journal article

A Laccase Associated with Lignification in Loblolly Pine Xylem

Science, 260(5108), 672–674.

By: W. Bao n, D. O'Malley n, R. Whetten n & R. Sederoff n

co-author countries: United States of America 🇺🇸
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

1993 journal article

The role of laccase in lignification

The Plant Journal, 4(5), 751–757.

By: D. O'Malley, R. Whetten*, W. Bao, C. Chen n & R. Sederoff

co-author countries: United States of America 🇺🇸
Sources: Crossref, ORCID
Added: January 4, 2020

1992 journal article

PHENYLALANINE AMMONIA-LYASE FROM LOBLOLLY-PINE - PURIFICATION OF THE ENZYME AND ISOLATION OF COMPLEMENTARY-DNA CLONES

PLANT PHYSIOLOGY, 98(1), 380–386.

By: R. Whetten* & R. Sederoff

Sources: Web Of Science, ORCID
Added: August 6, 2018

1991 journal article

Genetic engineering of wood

Forest Ecology and Management, 43(3-4), 301–316.

By: R. Whetten n & R. Sederoff n

co-author countries: United States of America 🇺🇸
Sources: Crossref, ORCID, Web Of Science
Added: August 6, 2018

1988 journal article

Molecular structure and transformation of the glucose dehydrogenase gene in Drosophila melanogaster

Genetics, 120(2), 475–484.

By: R. Whetten, E. Organ, P. Krasney, D. Cox-Foster & D. Cavener

Source: NC State University Libraries
Added: January 4, 2020

1986 journal article

Isolation of the eclosion gene cluster and the developmental expression of the Gld gene in Drosophila melanogaster.

The EMBO Journal, 5(11), 2939–2948.

By: D. Cavener*, G. Corbett, D. Cox* & R. Whetten*

co-author countries: Czechia 🇨🇿 Italy 🇮🇹 United States of America 🇺🇸
MeSH headings : Animals; Carbohydrate Dehydrogenases / genetics; Chromosome Deletion; Chromosome Mapping; Cloning, Molecular; DNA Restriction Enzymes; Drosophila melanogaster / enzymology; Drosophila melanogaster / genetics; Genes; Genetic Complementation Test; Glucose Dehydrogenases / genetics; Mutation; Nucleic Acid Hybridization; Translocation, Genetic
Sources: Crossref, ORCID
Added: January 4, 2020