2023 article
Analysis of Gene Expression Differences Between Eastern and Western Loblolly Pine Seed Sources
Festa, A. R., & Whetten, R. (2023, April 28).
2023 journal article
Genomic Tools in Applied Tree Breeding Programs: Factors to Consider
FORESTS, 14(2).
2023 article
Transcriptomic Prediction of Breeding Values in Loblolly Pine
Festa, A. R., & Whetten, R. (2023, March 24).
2023 journal article
Two pathogen loci determine Blumeria graminis
New Phytologist, 238(4), 1546โ1561.
2021 journal article
A genomeโwide SNP genotyping resource for tropical pine tree species
Molecular Ecology Resources, 22(2), 695โ710.
2021 review
Breeding for Climate Change Resilience: A Case Study of Loblolly Pine (Pinus taeda L.) in North America
[Review of ]. FRONTIERS IN PLANT SCIENCE, 12.
2021 journal article
Provenance and Family Variation in Biomass Potential of Loblolly Pine in the Piedmont of North Carolina
FOREST SCIENCE, 67(3), 312โ320.
2021 article
Simulation of Pedigree vs. fully-informative marker based relationships matrices in a Loblolly Pine breeding population
Festa, A. R., & Whetten, R. (2021, December 1).
2021 journal article
Toward genomic selection in Pinus taeda: Integrating resources to support array design in a complex conifer genome
APPLICATIONS IN PLANT SCIENCES, 9(6).
2020 journal article
A fast, flexible and inexpensive protocol for DNA and RNA extraction for forest trees
FOREST SYSTEMS, 29(2).
2020 journal article
Ad hoc breeding of a genetically depauperate landrace of noble fir (Abies procera Rehder) using SNP genotyping via high-throughput targeted sequencing
Tree Genetics & Genomes, 16(5).
2020 journal article
Correspondence between Breeding Values of the Same Pinus taeda L. Genotypes from Clonal Trials and Half-Sib Seedling Progeny Trials
Forest Science, 66(5), 600โ611.
Contributors: M. Shaliziโ n
2020 journal article
Population structure, landscape genomics, and genetic signatures of adaptation to exotic disease pressure in Cornus florida L.โInsights from GWAS and GBS data
Journal of Systematics and Evolution, 58(5), 546โ570.
2018 journal article
Heritable variation in needle spectral reflectance of Scots pine (Pinus sylvestris L.) peaks in red edge
Remote Sensing of Environment, 219, 89โ98.
2017 article
Advances in ecological genomics in forest trees and applications to genetic resources conservation and breeding
Holliday, J. A., Aitken, S. N., Cooke, J. E. K., Fady, B., Gonzalez-Martinez, S. C., Heuertz, M., โฆ Plomion, C. (2017, February). MOLECULAR ECOLOGY, Vol. 26, pp. 706โ717.
2017 journal article
Correspondence of Loblolly Pine Response for Fusiform Rust Disease from Local and Wide-Ranging Tests in the Southern United States
FOREST SCIENCE, 63(5), 496โ503.
2017 journal article
Optimal seed deployment under climate change using spatial models: Application to loblolly pine in the Southeastern US
Journal of the American Statistical Association, 112(519), 909โ920.
2017 journal article
Response of Turkish and Trojan fir to Phytophthora cinnamomi and P.ย cryptogea
Scandinavian Journal of Forest Research, 32(5), 406โ411.
2017 journal article
Variation among Loblolly Pine Seed Sources across Diverse Environments in the Southeastern United States
Forest Science, 63(1), 39โ48.
2016 journal article
Ecological genomics of local adaptation in Cornus florida L. by genotyping by sequencing
Ecology and Evolution, 7(1), 441โ465.
2016 journal article
Genetic variability and heritability of chlorophyll a fluorescence parameters in Scots pine (Pinus sylvestris L.)
Tree Physiology, 36(7), 883โ895.
Ed(s): J. Schnitzler
2016 journal article
Quantitative trait loci influencing forking defects in an outbred pedigree of loblolly pine
BMC Genetics, 17(1).
2015 journal article
Modeling Climate Change Effects on the Height Growth of Loblolly Pine
Forest Science, 61(4), 703โ715.
2015 journal article
Phylogenomics of polyploid Fothergilla (Hamamelidaceae) by RAD-tag based GBS-insights into species origin and effects of software pipelines
Journal of Systematics and Evolution, 53(5), 432โ447.
2014 journal article
Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies
GENOME BIOLOGY, 15(3).
2014 journal article
Development of a genetic linkage map for Pinus radiata and detection of pitch canker disease resistance associated QTLs
Trees, 28(6), 1823โ1835.
2014 journal article
Genetic Analysis of Diallel Progeny Test Data Using Factor Analytic Linear Mixed Models
FOREST SCIENCE, 60(1), 119โ127.
Contributors: F. Ogut n, C. Maltecca nโ, nโ, S. Mckeand nโ & F. Isik*โ
2014 journal article
Genetics of Stem Forking and Ramicorn Branches in a Cloned Loblolly Pine Family
Forest Science, 60(2), 360โ366.
2013 journal article
Genomic Estimated Breeding Values Using Genomic Relationship Matrices in a Cloned Population of Loblolly Pine
G3: Genes|Genomes|Genetics, 3(5), 909โ916.
2013 journal article
Potential for evolutionary responses to climate change - evidence from tree populations
Global Change Biology, 19(6), 1645โ1661.
2012 journal article
SNP markers trace familial linkages in a cloned population of Pinus taeda-prospects for genomic selection
TREE GENETICS & GENOMES, 8(6), 1307โ1318.
Contributors: J. Zapata-Valenzuela n, F. Isik nโ, C. Maltecca nโ, J. Wegrzynโ*, D. Nealeโ*, S. McKeand nโ, nโ
2011 journal article
Association genetics of carbon isotope discrimination, height and foliar nitrogen in a natural population of Pinus taeda L
Heredity, 107(2), 105โ114.
2011 journal article
Comparison between tracheary element lignin formation and extracellular lignin-like substance formation during the culture of isolated Zinnia elegans mesophyll cells
BIOLOGIA, 66(1), 88โ95.
2011 journal article
Interactions of Fr genes and mixed-pathogen inocula in the loblolly pine-fusiform rust pathosystem
Tree Genetics & Genomes, 8(1), 15โ25.
2010 journal article
Genetic variation of stem forking in loblolly pine
Forest Science, 56(5), 429โ436.
2010 review
Research gap analysis for application of biotechnology to sustaining US forests
[Review of ]. Journal of Forestry, 108(4), 193โ201.
2009 journal article
Polymerase chain reaction of template for massively-parallel pyrosequencing
Journal of Biomolecular Techniques, 20(2), 128โ134.
2009 journal article
Post-translational modification of an R2R3-MYB transcription factor by a MAP Kinase during xylem development
NEW PHYTOLOGIST, 183(4), 1001โ1013.
2008 journal article
Resistance of Pinus taeda families under artificial inoculations with diverse fusiform rust pathogen populations and comparison with field trials
Canadian Journal of Forest Research, 38(10), 2687โ2696.
2008 article
Resistance of Pinus taeda families under artificial inoculations with diverse fusiform rust pathogen populations and comparison with field trials (vol 38, pg 2687, 2008)
Isik, F., Amerson, H. V., Whetten, R. W., Garcia, S. A., Li, B., & McKeand, S. E. (2008, December). CANADIAN JOURNAL OF FOREST RESEARCH-REVUE CANADIENNE DE RECHERCHE FORESTIERE, Vol. 38, pp. 3151โ3151.
2006 journal article
Characterization of two laccases of loblolly pine (Pinus taeda) expressed in tobacco BY-2 cells
JOURNAL OF PLANT RESEARCH, 119(6), 581โ588.
2004 journal article
An auxin-inducible gene from loblolly pine ( Pinus taeda L.) is differentially expressed in mature and juvenile-phase shoots and encodes a putative transmembrane protein
Planta, 218(6), 916โ927.
2004 journal article
Gene Expression during Formation of Earlywood and Latewood in Loblolly Pine: Expression Profiles of 350 Genes
Plant Biology, 6(6), 654โ663.
2004 journal article
Genetics of Postzygotic Isolation in Eucalyptus: Whole-Genome Analysis of Barriers to Introgression in a Wide Interspecific Cross of Eucalyptus grandis and E. globulus
Genetics, 166(3), 1405โ1418.
2003 journal article
An arabinogalactan protein associated with secondary cell wall formation in differentiating xylem of loblolly pine
Plant Molecular Biology, 52(1), 91โ102.
2003 journal article
Apparent homology of expressed genes from wood-forming tissues of loblolly pine (Pinus taeda L.) with Arabidopsis thaliana
Proceedings of the National Academy of Sciences, 100(12), 7383โ7388.
2003 journal article
Aux/IAA gene family is conserved in the gymnosperm, loblolly pine (Pinus taeda)
Tree Physiology, 23(17), 1181โ1192.
2003 journal article
Changes in mitogen-activated protein kinase activity occur in the maize pulvinus in response to gravistimulation and are important for the bending response
PLANT CELL AND ENVIRONMENT, 26(7), 991โ1001.
2003 journal article
Characterisation of PtMYB1, an R2R3-MYB from pine xylem
Plant Molecular Biology, 53(4), 597โ608.
2003 journal article
Characterisation of a pine MYB that regulates lignification
The Plant Journal, 36(6), 743โ754.
2003 journal article
Comparative genetic linkage maps of Eucalyptus grandis, Eucalyptus globulus and their F1 hybrid based on a double pseudo-backcross mapping approach
Theoretical and Applied Genetics, 107(6), 1028โ1042.
2002 journal article
Studying the functional genomics of stress responses in loblolly pine with the Expresso microarray experiment management system
COMPARATIVE AND FUNCTIONAL GENOMICS, 3(3), 226โ243.
2001 chapter
Functional genomics and cell wall biosynthesis in loblolly pine
In Plant Cell Walls (pp. 275โ291).
2001 journal article
Functional genomics and cell wall biosynthesis in loblolly pine
Plant Molecular Biology, 47(1/2), 275โ291.
2001 journal article
Genotypic control of high-frequency adventitious shoot regeneration via somatic organogenesis in loblolly pine
Plant Science, 161(2), 267โ272.
2001 journal article
High-throughput AFLP analysis using infrared dye-labeled primers and an automated DNA sequencer
BIOTECHNIQUES, 30(2), 348-+.
2001 journal article
Molecular Cloning and Expression of Eight Laccase cDNAs in Loblolly Pine (Pinus taeda)*
Journal of Plant Research, 114(2), 147โ155.
2001 journal article
Regeneration of transgenic loblolly pine (Pinus taeda L.) from zygotic embryos transformed with Agrobacterium tumefaciens
PLANTA, 213(6), 981โ989.
1999 journal article
Construction of an AFLP genetic map with nearly complete genome coverage in Pinus taeda
THEORETICAL AND APPLIED GENETICS, 98(8), 1279โ1292.
1999 journal article
High-efficiency Agrobacterium-mediated transformation of Norway spruce (Picea abies) and loblolly pine (Pinus taeda)
Plant Molecular Biology, 39(3), 407โ416.
1998 journal article
AFLP genetic maps of Eucalyptus globulus and E-tereticornis
THEORETICAL AND APPLIED GENETICS, 96(6-7), 727โ737.
1998 journal article
Analysis of xylem formation in pine by cDNA sequencing
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 95(16), 9693โ9698.
1998 patent
Method of altering lignin in trees
Washington, DC: U.S. Patent and Trademark Office.
1998 review
Recent advances in understanding lignin biosynthesis
[Review of ]. ANNUAL REVIEW OF PLANT PHYSIOLOGY AND PLANT MOLECULAR BIOLOGY, 49(1998), 585โ609.
1997 journal article
Abnormal lignin in a loblolly pine mutant
SCIENCE, 277(5323), 235โ239.
1997 article
Inheritance, gene expression, and lignin characterization in a mutant pine deficient in cinnamyl alcohol dehydrogenase
MacKay, J. J., OMalley, D. M., Presnell, T., Booker, F. L., Campbell, M. M., Whetten, R. W., & Sederoff, R. R. (1997, July 22). PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, Vol. 94, pp. 8255โ8260.
1997 chapter
Molecular markers and forest trees
In P. M. G. G. Caetano-Anolles (Ed.), DNA markers: Protocols, applications, and overviews (pp. 237โ257). New York: Wiley-VCH.
Ed(s): P. G. Caetano-Anolles
1995 journal article
4-Coumarate: Coenzyme A Ligase from Loblolly Pine Xylem: Isolation, Characterization, and Complementary DNA Cloning
Plant Physiology, 108(1), 85โ97.
1995 journal article
Characterization of an Unstable Anthocyanin Phenotype and Estimation of Somatic Mutation Rates in Peach
Journal of Heredity, 86(3), 186โ193.
1995 journal article
Genetic analysis of cinnamyl alcohol dehydrogenase in loblolly pine: single gene inheritance, molecular characterization and evolution
MGG Molecular & General Genetics, 247(5), 537โ545.
1995 journal article
Inheritance, Genetic Interaction, and Biochemical Characterization of Anthocyanin Phenotypes in Peach
Journal of Heredity, 86(1), 32โ38.
1995 review
LIGNIN BIOSYNTHESIS
[Review of ]. PLANT CELL, 7(7), 1001โ1013.
1993 journal article
A Laccase Associated with Lignification in Loblolly Pine Xylem
Science, 260(5108), 672โ674.
1993 journal article
The role of laccase in lignification
The Plant Journal, 4(5), 751โ757.
1992 journal article
PHENYLALANINE AMMONIA-LYASE FROM LOBLOLLY-PINE - PURIFICATION OF THE ENZYME AND ISOLATION OF COMPLEMENTARY-DNA CLONES
PLANT PHYSIOLOGY, 98(1), 380โ386.
1991 journal article
Genetic engineering of wood
Forest Ecology and Management, 43(3-4), 301โ316.
1988 journal article
Molecular structure and transformation of the glucose dehydrogenase gene in Drosophila melanogaster
Genetics, 120(2), 475โ484.
1986 journal article
Isolation of the eclosion gene cluster and the developmental expression of the Gld gene in Drosophila melanogaster.
The EMBO Journal, 5(11), 2939โ2948.