Ryan Paerl

Paerl, R. W., Curtis, N. P., Bittner, M. J., Cohn, M. R., Gifford, S. M., Bannon, C. C., … Bertrand, E. M. (2023, June 28). Use and detection of a vitamin B1 degradation product yields new views of the marine B1 cycle and plankton metabolite exchange. MBIO, Vol. 6. https://doi.org/10.1128/mbio.00061-23

Sathe, R. R. M., Paerl, R. W., & Hazra, A. B. (2022). Exchange of Vitamin B-1 and Its Biosynthesis Intermediates Shapes the Composition of Synthetic Microbial Cocultures and Reveals Complexities of Nutrient Sharing. JOURNAL OF BACTERIOLOGY, 204(4). https://doi.org/10.1128/jb.00503-21

Plaas, H. E., Paerl, R. W., Baumann, K., Karl, C., Popendorf, K. J., Barnard, M. A., … Paerl, H. W. (2022). Harmful cyanobacterial aerosolization dynamics in the airshed of a eutrophic estuary. SCIENCE OF THE TOTAL ENVIRONMENT, 852. https://doi.org/10.1016/j.scitotenv.2022.158383

Wienhausen, G., Bittner, M. J., & Paerl, R. W. (2022). Key Knowledge Gaps to Fill at the Cell-To-Ecosystem Level in Marine B-Vitamin Cycling. FRONTIERS IN MARINE SCIENCE, 9. https://doi.org/10.3389/fmars.2022.876726

Asmala, E., Osburn, C. L., Paerl, R. W., & Paerl, H. W. (2021). Elevated organic carbon pulses persist in estuarine environment after major storm events. LIMNOLOGY AND OCEANOGRAPHY LETTERS, 6(1), 43–50. https://doi.org/10.1002/lol2.10169

Paerl, R. W., Venezia, R. E., Sanchez, J. J., & Paerl, H. W. (2020). Picophytoplankton dynamics in a large temperate estuary and impacts of extreme storm events. SCIENTIFIC REPORTS, 10(1). https://doi.org/10.1038/s41598-020-79157-6

Yadav, S., Venezia, R. E., Paerl, R. W., & Petters, M. D. (2019). Characterization of Ice‐Nucleating Particles Over Northern India. Journal of Geophysical Research: Atmospheres, 124(19), 10467–10482. https://doi.org/10.1029/2019JD030702

Paerl, R. W., Bertrand, E. M., Rowland, E., Schatt, P., Mehiri, M., Niehaus, T. D., … Bouget, F.-Y. (2018). Author Correction: Carboxythiazole is a key microbial nutrient currency and critical component of thiamin biosynthesis. Scientific Reports, 8(1). https://doi.org/10.1038/S41598-018-27042-8

Paerl, R. W., Bertrand, E. M., Rowland, E., Schatt, P., Mehiri, M., Niehaus, T. D., … Bouget, F.-Y. (2018). Carboxythiazole is a key microbial nutrient currency and critical component of thiamin biosynthesis. Scientific Reports, 8(1). https://doi.org/10.1038/s41598-018-24321-2

Pedersen, J. N., Bombar, D., Paerl, R. W., & Riemann, L. (2018). Diazotrophs and N-2-Fixation Associated With Particles in Coastal Estuarine Waters. FRONTIERS IN MICROBIOLOGY, 9. https://doi.org/10.3389/fmicb.2018.02759

Bombar, D., Paerl, R. W., Anderson, R., & Riemann, L. (2018). Filtration via Conventional Glass Fiber Filters in 15N2 Tracer Assays Fails to Capture All Nitrogen-Fixing Prokaryotes. Frontiers in Marine Science, 5. https://doi.org/10.3389/fmars.2018.00006

Paerl, R. W., Hansen, T. N. G., Henriksen, N. N. S. E., Olesen, A. K., & Riemann, L. (2018). N-fixation and related O2 constraints on model marine diazotroph Pseudomonas stutzeri BAL361. Aquatic Microbial Ecology, 81(2), 125–136. https://doi.org/10.3354/ame01867

Paerl, R. W., Sundh, J., Tan, D., Svenningsen, S. L., Hylander, S., Pinhassi, J., … Riemann, L. (2018). Prevalent reliance of bacterioplankton on exogenous vitamin B1 and precursor availability. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 115(44), E10447–E10456. https://doi.org/10.1073/pnas.1806425115

Paerl, R. W., Bouget, F. Y., Lozano, J. C., Vergé, V., Schatt, P., Allen, E. E., … Azam, F. (2017). Use of plankton-derived vitamin B1 precursors, especially thiazole-related precursor, by key marine picoeukaryotic phytoplankton. The ISME Journal, 11(3), 753–765. https://doi.org/10.1038/ismej.2016.145

Bombar, D., Paerl, R. W., & Riemann, L. (2016). Marine Non-Cyanobacterial Diazotrophs: Moving beyond Molecular Detection. Trends in Microbiology, 24(11), 916–927. https://doi.org/10.1016/j.tim.2016.07.002

Paerl, R. W., Bertrand, E. M., Allen, A. E., Palenik, B., & Azam, F. (2015). Vitamin B1 ecophysiology of marine picoeukaryotic algae: Strain-specific differences and a new role for bacteria in vitamin cycling. Limnology and Oceanography, 60(1), 215–228. https://doi.org/10.1002/LNO.10009

Shilova, I. N., Robidart, J. C., James Tripp, H., Turk-Kubo, K., Wawrik, B., Post, A. F., … Zehr, J. P. (2014). A microarray for assessing transcription from pelagic marine microbial taxa. The ISME Journal, 8(7), 1476–1491. https://doi.org/10.1038/ismej.2014.1

Moisander, P. H., Serros, T., Paerl, R. W., Beinart, R. A., & Zehr, J. P. (2014). Gammaproteobacterial diazotrophs and nifH gene expression in surface waters of the South Pacific Ocean. The ISME Journal, 8(10), 1962–1973. https://doi.org/10.1038/ismej.2014.49

Robidart, J. C., Preston, C. M., Paerl, R. W., Turk, K. A., Mosier, A. C., Francis, C. A., … Zehr, J. P. (2012). Seasonal Synechococcus and Thaumarchaeal population dynamics examined with high resolution with remote in situ instrumentation. The ISME Journal, 6(3), 513–523. https://doi.org/10.1038/ismej.2011.127

Paerl, R. W., Tozzi, S., Kolber, Z. S., & Zehr, J. P. (2012). Variation in Synechococcus sp. CC9311 narB mRNA abundance relative to changes in light, nitrogen growth conditions and nitrate assimilation. Journal of Phycology, 48(4), 1028–1039. https://doi.org/10.1111/j.1529-8817.2012.01197.x

Paerl, R. W., Johnson, K. S., Welsh, R. M., Worden, A. Z., Chavez, F. P., & Zehr, J. P. (2011). Differential Distributions of Synechococcus Subgroups Across the California Current System. Frontiers in Microbiology, 2. https://doi.org/10.3389/fmicb.2011.00059

Foster, R. A., Kuypers, M. M. M., Vagner, T., Paerl, R. W., Musat, N., & Zehr, J. P. (2011). Nitrogen fixation and transfer in open ocean diatom–cyanobacterial symbioses. The ISME Journal, 5(9), 1484–1493. https://doi.org/10.1038/ismej.2011.26

Paerl, R. W., Turk, K. A., Beinart, R. A., Chavez, F. P., & Zehr, J. P. (2011). Seasonal change in the abundance of Synechococcus and multiple distinct phylotypes in Monterey Bay determined by rbcL and narB quantitative PCR. Environmental Microbiology, 14(3), 580–593. https://doi.org/10.1111/j.1462-2920.2011.02594.x

Goebel, N. L., Turk, K. A., Achilles, K. M., Paerl, R. W., Hewson, I., Morrison, A. E., … Zehr, J. P. (2010). Abundance and distribution of major groups of diazotrophic cyanobacteria and their potential contribution to N2 fixation in the tropical Atlantic Ocean. Environmental Microbiology, 12, 3272–3289. https://doi.org/10.1111/j.1462-2920.2010.02303.x

Boyd, T. J., Barham, B. P., Hall, G. J., Schumann, B. S., Paerl, R. W., & Osburn, C. L. (2010). Variation in ultrafiltered and LMW organic matter fluorescence properties under simulated estuarine mixing transects: 2. Mixing with photoexposure. Journal of Geophysical Research, 115. https://doi.org/10.1029/2009JG000994

Hewson, I., Poretsky, R. S., Beinart, R. A., White, A. E., Shi, T., Bench, S. R., … Zehr, J. P. (2009). In situ transcriptomic analysis of the globally important keystone N2-fixing taxon Crocosphaera watsonii. The ISME Journal, 3(5), 618–631. https://doi.org/10.1038/ismej.2009.8

Hewson, I., Paerl, R. W., Tripp, H. J., Zehr, J. P., & Karl, D. M. (2009). Metagenomic potential of microbial assemblages in the surface waters of the central Pacific Ocean tracks variability in oceanic habitat. Limnology and Oceanography, 54(6), 1981–1994. https://doi.org/10.4319/lo.2009.54.6.1981

Paerl, R. W., Foster, R. A., Jenkins, B. D., Montoya, J. P., & Zehr, J. P. (2008). Phylogenetic diversity of cyanobacterial narB genes from various marine habitats. Environmental Microbiology, 10(12), 3377–3387. https://doi.org/10.1111/j.1462-2920.2008.01741.x